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CcUC08G156610.1 (mRNA) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTATCTCCAGATTCATTGGGGACTTTCTACAAACACTTGGTGGGCGGTCTCGAGCAGCGGCGGAATCCGCCATTGACGACGACGCATCAAGGCCCCACAGAGTGGTCTACGATGACGTATTACTCAGGGCGTTGATTACGGTGTTTGGGATGAGGGAAAACGGGAGAATCAAAAAGGAAAAAGCAAAGGGGGTGGTGGAGAAACTTGGGTTGATACAGAGTGAAGAAGAGAAGGAGAAATTCGAGCTGGCGGCGGCGGAGGGCGGCGATGAGGTGGCGGTGGAGGAGGTGATCGGAGAGGAGGAAGGGAAGAGAAATGAGCTGCTTTATGAAGCGTTCAAGATATTTGATGTGGATGGAGATGGGTTTATTGACACAGTGGAATTGAAAAGAGTGCTTGATTGTTTGGGGTTAGATAAAGGGTGGGGAATTAGAGAGATTGAGAAAATGGTTAGTGTTGTGGATGTTAATTTGGATGGAAAAGTTGACTTTAGTGAGTTTGAATTAATGATGGGTGTAAAGTAA ATGGGTATCTCCAGATTCATTGGGGACTTTCTACAAACACTTGGTGGGCGGTCTCGAGCAGCGGCGGAATCCGCCATTGACGACGACGCATCAAGGCCCCACAGAGTGGTCTACGATGACGTATTACTCAGGGCGTTGATTACGGTGTTTGGGATGAGGGAAAACGGGAGAATCAAAAAGGAAAAAGCAAAGGGGGTGGTGGAGAAACTTGGGTTGATACAGAGTGAAGAAGAGAAGGAGAAATTCGAGCTGGCGGCGGCGGAGGGCGGCGATGAGGTGGCGGTGGAGGAGGTGATCGGAGAGGAGGAAGGGAAGAGAAATGAGCTGCTTTATGAAGCGTTCAAGATATTTGATGTGGATGGAGATGGGTTTATTGACACAGTGGAATTGAAAAGAGTGCTTGATTGTTTGGGGTTAGATAAAGGGTGGGGAATTAGAGAGATTGAGAAAATGGTTAGTGTTGTGGATGTTAATTTGGATGGAAAAGTTGACTTTAGTGAGTTTGAATTAATGATGGGTGTAAAGTAA ATGGGTATCTCCAGATTCATTGGGGACTTTCTACAAACACTTGGTGGGCGGTCTCGAGCAGCGGCGGAATCCGCCATTGACGACGACGCATCAAGGCCCCACAGAGTGGTCTACGATGACGTATTACTCAGGGCGTTGATTACGGTGTTTGGGATGAGGGAAAACGGGAGAATCAAAAAGGAAAAAGCAAAGGGGGTGGTGGAGAAACTTGGGTTGATACAGAGTGAAGAAGAGAAGGAGAAATTCGAGCTGGCGGCGGCGGAGGGCGGCGATGAGGTGGCGGTGGAGGAGGTGATCGGAGAGGAGGAAGGGAAGAGAAATGAGCTGCTTTATGAAGCGTTCAAGATATTTGATGTGGATGGAGATGGGTTTATTGACACAGTGGAATTGAAAAGAGTGCTTGATTGTTTGGGGTTAGATAAAGGGTGGGGAATTAGAGAGATTGAGAAAATGGTTAGTGTTGTGGATGTTAATTTGGATGGAAAAGTTGACTTTAGTGAGTTTGAATTAATGATGGGTGTAAAGTAA MGISRFIGDFLQTLGGRSRAAAESAIDDDASRPHRVVYDDVLLRALITVFGMRENGRIKKEKAKGVVEKLGLIQSEEEKEKFELAAAEGGDEVAVEEVIGEEEGKRNELLYEAFKIFDVDGDGFIDTVELKRVLDCLGLDKGWGIREIEKMVSVVDVNLDGKVDFSEFELMMGVK Homology
BLAST of CcUC08G156610.1 vs. NCBI nr
Match: XP_038886166.1 (calmodulin-like protein 2 [Benincasa hispida]) HSP 1 Score: 318.5 bits (815), Expect = 3.5e-83 Identity = 166/176 (94.32%), Postives = 170/176 (96.59%), Query Frame = 0
BLAST of CcUC08G156610.1 vs. NCBI nr
Match: XP_008445056.1 (PREDICTED: calmodulin-like protein 7 [Cucumis melo] >KAA0065018.1 calmodulin-like protein 7 [Cucumis melo var. makuwa]) HSP 1 Score: 308.1 bits (788), Expect = 4.7e-80 Identity = 161/175 (92.00%), Postives = 166/175 (94.86%), Query Frame = 0
BLAST of CcUC08G156610.1 vs. NCBI nr
Match: XP_004138884.1 (calmodulin-like protein 2 [Cucumis sativus] >KGN62844.1 hypothetical protein Csa_021949 [Cucumis sativus]) HSP 1 Score: 305.4 bits (781), Expect = 3.1e-79 Identity = 159/175 (90.86%), Postives = 165/175 (94.29%), Query Frame = 0
BLAST of CcUC08G156610.1 vs. NCBI nr
Match: XP_022951438.1 (calmodulin-like protein 2 [Cucurbita moschata] >XP_023537761.1 calmodulin-like protein 2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 292.7 bits (748), Expect = 2.1e-75 Identity = 156/177 (88.14%), Postives = 163/177 (92.09%), Query Frame = 0
BLAST of CcUC08G156610.1 vs. NCBI nr
Match: KAG6585405.1 (putative calcium-binding protein CML27, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020321.1 putative calcium-binding protein CML27, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 290.4 bits (742), Expect = 1.0e-74 Identity = 155/177 (87.57%), Postives = 162/177 (91.53%), Query Frame = 0
BLAST of CcUC08G156610.1 vs. ExPASy Swiss-Prot
Match: Q9FI19 (Probable calcium-binding protein CML43 OS=Arabidopsis thaliana OX=3702 GN=CML43 PE=2 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 4.4e-12 Identity = 37/70 (52.86%), Postives = 47/70 (67.14%), Query Frame = 0
BLAST of CcUC08G156610.1 vs. ExPASy Swiss-Prot
Match: Q9SU00 (Calmodulin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=CML2 PE=2 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 9.7e-12 Identity = 46/136 (33.82%), Postives = 72/136 (52.94%), Query Frame = 0
BLAST of CcUC08G156610.1 vs. ExPASy Swiss-Prot
Match: Q84UL5 (Probable calcium-binding protein CML32 OS=Oryza sativa subsp. japonica OX=39947 GN=CML32 PE=2 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 9.7e-12 Identity = 35/69 (50.72%), Postives = 45/69 (65.22%), Query Frame = 0
BLAST of CcUC08G156610.1 vs. ExPASy Swiss-Prot
Match: Q9SRR7 (Calmodulin-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=CML3 PE=2 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 1.7e-11 Identity = 49/140 (35.00%), Postives = 74/140 (52.86%), Query Frame = 0
BLAST of CcUC08G156610.1 vs. ExPASy Swiss-Prot
Match: Q9LNE7 (Calmodulin-like protein 7 OS=Arabidopsis thaliana OX=3702 GN=CML7 PE=2 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 1.7e-11 Identity = 48/141 (34.04%), Postives = 74/141 (52.48%), Query Frame = 0
BLAST of CcUC08G156610.1 vs. ExPASy TrEMBL
Match: A0A5A7VBM3 (Calmodulin-like protein 7 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G003420 PE=4 SV=1) HSP 1 Score: 308.1 bits (788), Expect = 2.3e-80 Identity = 161/175 (92.00%), Postives = 166/175 (94.86%), Query Frame = 0
BLAST of CcUC08G156610.1 vs. ExPASy TrEMBL
Match: A0A1S3BBS0 (calmodulin-like protein 7 OS=Cucumis melo OX=3656 GN=LOC103488209 PE=4 SV=1) HSP 1 Score: 308.1 bits (788), Expect = 2.3e-80 Identity = 161/175 (92.00%), Postives = 166/175 (94.86%), Query Frame = 0
BLAST of CcUC08G156610.1 vs. ExPASy TrEMBL
Match: A0A0A0LP90 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G376820 PE=4 SV=1) HSP 1 Score: 305.4 bits (781), Expect = 1.5e-79 Identity = 159/175 (90.86%), Postives = 165/175 (94.29%), Query Frame = 0
BLAST of CcUC08G156610.1 vs. ExPASy TrEMBL
Match: A0A6J1GHP6 (calmodulin-like protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111454254 PE=4 SV=1) HSP 1 Score: 292.7 bits (748), Expect = 9.9e-76 Identity = 156/177 (88.14%), Postives = 163/177 (92.09%), Query Frame = 0
BLAST of CcUC08G156610.1 vs. ExPASy TrEMBL
Match: A0A6J1KJR1 (calmodulin-like protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111496334 PE=4 SV=1) HSP 1 Score: 290.0 bits (741), Expect = 6.4e-75 Identity = 156/177 (88.14%), Postives = 163/177 (92.09%), Query Frame = 0
BLAST of CcUC08G156610.1 vs. TAIR 10
Match: AT5G44460.1 (calmodulin like 43 ) HSP 1 Score: 72.8 bits (177), Expect = 3.1e-13 Identity = 37/70 (52.86%), Postives = 47/70 (67.14%), Query Frame = 0
BLAST of CcUC08G156610.1 vs. TAIR 10
Match: AT4G12860.1 (EF hand calcium-binding protein family ) HSP 1 Score: 71.6 bits (174), Expect = 6.9e-13 Identity = 46/136 (33.82%), Postives = 72/136 (52.94%), Query Frame = 0
BLAST of CcUC08G156610.1 vs. TAIR 10
Match: AT1G05990.1 (EF hand calcium-binding protein family ) HSP 1 Score: 70.9 bits (172), Expect = 1.2e-12 Identity = 48/141 (34.04%), Postives = 74/141 (52.48%), Query Frame = 0
BLAST of CcUC08G156610.1 vs. TAIR 10
Match: AT3G07490.1 (ARF-GAP domain 11 ) HSP 1 Score: 70.9 bits (172), Expect = 1.2e-12 Identity = 49/140 (35.00%), Postives = 74/140 (52.86%), Query Frame = 0
BLAST of CcUC08G156610.1 vs. TAIR 10
Match: AT4G03290.1 (EF hand calcium-binding protein family ) HSP 1 Score: 68.9 bits (167), Expect = 4.5e-12 Identity = 49/143 (34.27%), Postives = 74/143 (51.75%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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