CcUC08G153770.1 (mRNA) Watermelon (PI 537277) v1

Overview


Name	CcUC08G153770.1
Type	mRNA
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Damaged dna-binding 2, putative isoform 1
Location	CicolChr08: 22205934 .. 22208181 (+)
Sequence length	2088
RNA-Seq Expression	CcUC08G153770.1
Synteny	CcUC08G153770.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAGGATAAAAAGGTGAGAGCGGAACATGAAAGTGCGATGGAAGCGCAGGCAGCGGATAAACTACAAAATATTAAAATTATAAGAAAAATGGAAAAAAATAATGTGATGAATGGAAGCCCGGCAGATGAGGATAAGGCCTTCGGCTTTCCTTTTCTGAGCTCTTTATCCTTTTCATTAACTCTCTCATCGAAGATGATTTCACTGTTTTCGTTCATTAATTGTTTCCAAATCCATAATTTTCTATATTTAAATTGTTGTTTGATCTTCTCTAGAAAATCTCTCCACTAAATCTCTGATTTGCACTCTCATGGCTGTCTTCTTCTTCTTCTTCTTCTTCCTCTTCCATTGATTACATTATCATATTCTCCAACTTAGTATTTTCCGTGAATATCTATATGTAAAAGTATATGTATAATCTCTTCAGTTGAAAACTGTAATAGTTTTGGTTTATCCCGTTTGTCCGTTTGGATTTGAATCACTAAGTAATGTCAATTGCTTTGGAAAGCAATAGCAGGATTCCGCCGTCTGTTTTCTCTCAAGGTGGCTTGCCGTCGTACTGCTCCGTCTTGAATACGTCGGGAATTAATACGGTAGTTCGGCGAGAGACGGCTGTTGCTGATGCGGTGGCGCCGGCAGAGGTGGATAGATGTAGTTCGTCTTCATCGTCGTCGATCGGAGAAAACAGTGGTTTCTCTGTACGATCTTCGGATAATGACGACGGAGAGGATAATGAGGCGGAAAGTTCGTATAAAGGACCTCTAGCAATGGAATCGTTGGAAGAAGTTCTGCCTATCAGGTTAGCGATTGTGATTTGATTTTTTGTTCTTCGTAATCTTCTTCGGTTTCTAGTTTTAGGGCAACTTGATCGATCGCTTTTTGATTTCGTTTCTGAAGGTTTCAATTACAAGATTCAGTTGAATTTTAACAATCTATATCATCTTCTGAATGTTATGCAGGAGAGGAATTTCGAATTTCTACAACGGAAAATCGAAATCCTTCACAAGCTTGGCAGACGCTTCCTCTTCTTCCTCCATTAAAGACATAACAAAACCTGAAAACGCTCTCTCTCGGAAACGCAGAAATCTCCTTGCATCGAATCTCATCGCCGGCGGCATATCGAAGCGACCGATTATAAGTTCAAGTCGAAGCTCGTTAGCGTTGGCCGTCGTCCTGAGCAGTTCCGAGAGCCACAACAGTAACGATCTGAATTCGAGATTGCCTCCGCCGATTCGTCCTCCATTGCATCCCAACGGACGAGCATCTCGCAGCAATTCAGGTGCTGCAGTTCCCCTTCTCTGTAAATTCCCCCCTTGGCGATCATACTCCTTGGCCAATATACAGTAGCGTAGGGTAAGGGTTTTTCCATAGCCGCCTCCATGGAAGCTAATCAATCACCATCAAAGATTAACTTGACCTTGCGAAACCGATTTTCATCAAATCGGTTTCTCACCAATAACTCATTTTCTTTCATATTGTCCACGATCTTACTTCTGCAGCAAATCTGTTTTGATTTTTATTTTTTTTTCCCTTTGTATGTATGTAAATTGAGAAGAAAAAAAGAATAGCAGTTCATCCATCGAATCGAGGTCTGTTTGTTTATAGAAATTGAGAAATCTGAGAGTTGCTTTTCCGGGTAAAGTTAAAGTAAAAATACAGATTATTGTGTAGCAGAAAATTTGGGGCAAATTGAAAAGGAATCATAATCATAATGGAGTGTCAATGTCAATGGTGTCAGGAATTGTGTGGAGATGGTGATTACGGTCACGTTATAAAGAACATGTACCTAATGGACTAAAATGGAATTACAAGCTTCAAGAGAGTTTTTCCAATTCAATCTAATTAGAACTAACCGTTGTTTAAGAAAGGGAATGAATAATTTTGACTTCTTGTGTCTGTCTCATCAGCCAAATATACAGAAATGACCTCATTTTCTTTTTCCTTCCTTCATCTTTCTTCTTCTTCTCTTCCTCTCTTCCTCTCTTCATCTAACCATTCCCCCTCAGTCTGCTTTTCTTCTTTGGTCACACTCCAGCTCCTTTTGATTGTATGCCTATGCCTTGTTTGATCTCTGTTGTTTATTCAGTGTGTATTGCAGAGCAAGATCGTGAGTCGAAGAATGAGTGATTTACATGAGATGGGAATTGAAGCGAGAGAGTGAAAAGCCTAACTCACGTGCACCAACTTGAACTTTTGTTTTGATCCTTTTACTTGAATTTGATATTGGCAAAGGATAAAAAAGAACAAGAC

mRNA sequence

AAAGGATAAAAAGGTGAGAGCGGAACATGAAAGTGCGATGGAAGCGCAGGCAGCGGATAAACTACAAAATATTAAAATTATAAGAAAAATGGAAAAAAATAATGTGATGAATGGAAGCCCGGCAGATGAGGATAAGGCCTTCGGCTTTCCTTTTCTGAGCTCTTTATCCTTTTCATTAACTCTCTCATCGAAGATGATTTCACTGTTTTCGTTCATTAATTGTTTCCAAATCCATAATTTTCTATATTTAAATTGTTGTTTGATCTTCTCTAGAAAATCTCTCCACTAAATCTCTGATTTGCACTCTCATGGCTGTCTTCTTCTTCTTCTTCTTCTTCCTCTTCCATTGATTACATTATCATATTCTCCAACTTAGTATTTTCCGTGAATATCTATATGTAAAAGTATATGTATAATCTCTTCAGTTGAAAACTGTAATAGTTTTGGTTTATCCCGTTTGTCCGTTTGGATTTGAATCACTAAGTAATGTCAATTGCTTTGGAAAGCAATAGCAGGATTCCGCCGTCTGTTTTCTCTCAAGGTGGCTTGCCGTCGTACTGCTCCGTCTTGAATACGTCGGGAATTAATACGGTAGTTCGGCGAGAGACGGCTGTTGCTGATGCGGTGGCGCCGGCAGAGGTGGATAGATGTAGTTCGTCTTCATCGTCGTCGATCGGAGAAAACAGTGGTTTCTCTGTACGATCTTCGGATAATGACGACGGAGAGGATAATGAGGCGGAAAGTTCGTATAAAGGACCTCTAGCAATGGAATCGTTGGAAGAAGTTCTGCCTATCAGGAGAGGAATTTCGAATTTCTACAACGGAAAATCGAAATCCTTCACAAGCTTGGCAGACGCTTCCTCTTCTTCCTCCATTAAAGACATAACAAAACCTGAAAACGCTCTCTCTCGGAAACGCAGAAATCTCCTTGCATCGAATCTCATCGCCGGCGGCATATCGAAGCGACCGATTATAAGTTCAAGTCGAAGCTCGTTAGCGTTGGCCGTCGTCCTGAGCAGTTCCGAGAGCCACAACAGTAACGATCTGAATTCGAGATTGCCTCCGCCGATTCGTCCTCCATTGCATCCCAACGGACGAGCATCTCGCAGCAATTCAGGTGCTGCAGTTCCCCTTCTCTGTAAATTCCCCCCTTGGCGATCATACTCCTTGGCCAATATACAGTAGCGTAGGGTAAGGGTTTTTCCATAGCCGCCTCCATGGAAGCTAATCAATCACCATCAAAGATTAACTTGACCTTGCGAAACCGATTTTCATCAAATCGGTTTCTCACCAATAACTCATTTTCTTTCATATTGTCCACGATCTTACTTCTGCAGCAAATCTGTTTTGATTTTTATTTTTTTTTCCCTTTGTATGTATGTAAATTGAGAAGAAAAAAAGAATAGCAGTTCATCCATCGAATCGAGGTCTGTTTGTTTATAGAAATTGAGAAATCTGAGAGTTGCTTTTCCGGGTAAAGTTAAAGTAAAAATACAGATTATTGTGTAGCAGAAAATTTGGGGCAAATTGAAAAGGAATCATAATCATAATGGAGTGTCAATGTCAATGGTGTCAGGAATTGTGTGGAGATGGTGATTACGGTCACGTTATAAAGAACATGTACCTAATGGACTAAAATGGAATTACAAGCTTCAAGAGAGTTTTTCCAATTCAATCTAATTAGAACTAACCGTTGTTTAAGAAAGGGAATGAATAATTTTGACTTCTTGTGTCTGTCTCATCAGCCAAATATACAGAAATGACCTCATTTTCTTTTTCCTTCCTTCATCTTTCTTCTTCTTCTCTTCCTCTCTTCCTCTCTTCATCTAACCATTCCCCCTCAGTCTGCTTTTCTTCTTTGGTCACACTCCAGCTCCTTTTGATTGTATGCCTATGCCTTGTTTGATCTCTGTTGTTTATTCAGTGTGTATTGCAGAGCAAGATCGTGAGTCGAAGAATGAGTGATTTACATGAGATGGGAATTGAAGCGAGAGAGTGAAAAGCCTAACTCACGTGCACCAACTTGAACTTTTGTTTTGATCCTTTTACTTGAATTTGATATTGGCAAAGGATAAAAAAGAACAAGAC

Coding sequence (CDS)

ATGTCAATTGCTTTGGAAAGCAATAGCAGGATTCCGCCGTCTGTTTTCTCTCAAGGTGGCTTGCCGTCGTACTGCTCCGTCTTGAATACGTCGGGAATTAATACGGTAGTTCGGCGAGAGACGGCTGTTGCTGATGCGGTGGCGCCGGCAGAGGTGGATAGATGTAGTTCGTCTTCATCGTCGTCGATCGGAGAAAACAGTGGTTTCTCTGTACGATCTTCGGATAATGACGACGGAGAGGATAATGAGGCGGAAAGTTCGTATAAAGGACCTCTAGCAATGGAATCGTTGGAAGAAGTTCTGCCTATCAGGAGAGGAATTTCGAATTTCTACAACGGAAAATCGAAATCCTTCACAAGCTTGGCAGACGCTTCCTCTTCTTCCTCCATTAAAGACATAACAAAACCTGAAAACGCTCTCTCTCGGAAACGCAGAAATCTCCTTGCATCGAATCTCATCGCCGGCGGCATATCGAAGCGACCGATTATAAGTTCAAGTCGAAGCTCGTTAGCGTTGGCCGTCGTCCTGAGCAGTTCCGAGAGCCACAACAGTAACGATCTGAATTCGAGATTGCCTCCGCCGATTCGTCCTCCATTGCATCCCAACGGACGAGCATCTCGCAGCAATTCAGGTGCTGCAGTTCCCCTTCTCTGTAAATTCCCCCCTTGGCGATCATACTCCTTGGCCAATATACAGTAG

Protein sequence

MSIALESNSRIPPSVFSQGGLPSYCSVLNTSGINTVVRRETAVADAVAPAEVDRCSSSSSSSIGENSGFSVRSSDNDDGEDNEAESSYKGPLAMESLEEVLPIRRGISNFYNGKSKSFTSLADASSSSSIKDITKPENALSRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSSESHNSNDLNSRLPPPIRPPLHPNGRASRSNSGAAVPLLCKFPPWRSYSLANIQ

Homology

[Close]

BLAST of CcUC08G153770.1 vs. NCBI nr
Match: KAA0064705.1 (Damaged dna-binding 2, putative isoform 1 [Cucumis melo var. makuwa] >TYK00723.1 Damaged dna-binding 2, putative isoform 1 [Cucumis melo var. makuwa])

HSP 1 Score: 385.6 bits (989), Expect = 3.1e-103
Identity = 209/234 (89.32%), Postives = 218/234 (93.16%), Query Frame = 0


Query: 1   MSIALESNSRIPPSVFSQGGLPSYCSVLNTSGINTVVRRETAVADAVAPAEVDRCSSSSS 60
           MSIALESN+RIPPSVFSQ GLP YCSVLNT+GI  VVRRE AVADAVAP +VDRCSSSSS
Sbjct: 1   MSIALESNTRIPPSVFSQAGLPPYCSVLNTTGIIPVVRREAAVADAVAPEDVDRCSSSSS 60

Query: 61  SSIGENSGFSVRSSDNDDGEDNEAESSYKGPLAMESLEEVLPIRRGISNFYNGKSKSFTS 120
           SSIGENSGFSVRSSDNDDGEDNEAESSY+GPL MESLEEVLPIRRGISNFYNGKSKSFTS
Sbjct: 61  SSIGENSGFSVRSSDNDDGEDNEAESSYRGPLGMESLEEVLPIRRGISNFYNGKSKSFTS 120

Query: 121 LADASSSSSIKDITKPENALSRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSSE 180
           LADASSSSSIK+I KPENA SRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSSE
Sbjct: 121 LADASSSSSIKEIAKPENAFSRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSSE 180

Query: 181 SHNSNDLNSRLPP--PIRPPLHPNGRASRSNSGAAVPLLCKFPPWRSYSLANIQ 233
           SH +NDLNS +PP  PIRPPLHPNGRASR NSG+AVP LCKFP WRSYS+ANIQ
Sbjct: 181 SHKNNDLNSIIPPPTPIRPPLHPNGRASRINSGSAVPSLCKFPTWRSYSMANIQ 234

[Close]

BLAST of CcUC08G153770.1 vs. NCBI nr
Match: XP_008445543.1 (PREDICTED: uncharacterized protein LOC103488525 [Cucumis melo])

HSP 1 Score: 385.6 bits (989), Expect = 3.1e-103
Identity = 209/234 (89.32%), Postives = 218/234 (93.16%), Query Frame = 0


Query: 1   MSIALESNSRIPPSVFSQGGLPSYCSVLNTSGINTVVRRETAVADAVAPAEVDRCSSSSS 60
           MSIALESN+RIPPSVFSQ GLP YCSVLNT+GI  VVRRE AVADAVAP +VDRCSSSSS
Sbjct: 36  MSIALESNTRIPPSVFSQAGLPPYCSVLNTTGIIPVVRREAAVADAVAPEDVDRCSSSSS 95

Query: 61  SSIGENSGFSVRSSDNDDGEDNEAESSYKGPLAMESLEEVLPIRRGISNFYNGKSKSFTS 120
           SSIGENSGFSVRSSDNDDGEDNEAESSY+GPL MESLEEVLPIRRGISNFYNGKSKSFTS
Sbjct: 96  SSIGENSGFSVRSSDNDDGEDNEAESSYRGPLGMESLEEVLPIRRGISNFYNGKSKSFTS 155

Query: 121 LADASSSSSIKDITKPENALSRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSSE 180
           LADASSSSSIK+I KPENA SRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSSE
Sbjct: 156 LADASSSSSIKEIAKPENAFSRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSSE 215

Query: 181 SHNSNDLNSRLPP--PIRPPLHPNGRASRSNSGAAVPLLCKFPPWRSYSLANIQ 233
           SH +NDLNS +PP  PIRPPLHPNGRASR NSG+AVP LCKFP WRSYS+ANIQ
Sbjct: 216 SHKNNDLNSIIPPPTPIRPPLHPNGRASRINSGSAVPSLCKFPTWRSYSMANIQ 269

[Close]

BLAST of CcUC08G153770.1 vs. NCBI nr
Match: XP_038883984.1 (uncharacterized protein LOC120074946 [Benincasa hispida])

HSP 1 Score: 383.6 bits (984), Expect = 1.2e-102
Identity = 213/233 (91.42%), Postives = 218/233 (93.56%), Query Frame = 0


Query: 1   MSIALESNSRIPPSVFSQGGLPSYCSVLNTSGINTVVRRE-TAVADAVAPAEVDRCSSSS 60
           MSIALESNSRIPPSVFSQ GLPSYCSVLNT+G   VVR+E  AV DAVA AEVD CSSSS
Sbjct: 1   MSIALESNSRIPPSVFSQSGLPSYCSVLNTTGRIPVVRQEAAAVGDAVA-AEVDGCSSSS 60

Query: 61  SSSIGENSGFSVRSSDNDDGEDNEAESSYKGPLAMESLEEVLPIRRGISNFYNGKSKSFT 120
           SSSIGENSGFSVRSSDND+GEDNEAESSYKGPL MESLEEVLPIRRGISNFYNGKSKSFT
Sbjct: 61  SSSIGENSGFSVRSSDNDNGEDNEAESSYKGPLGMESLEEVLPIRRGISNFYNGKSKSFT 120

Query: 121 SLADASSSSSIKDITKPENALSRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSS 180
           SLADASSSSSIKDI KPENA SRKRRNLLASNLIAGGISKRPII+SSRSSLALAVVLSSS
Sbjct: 121 SLADASSSSSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIINSSRSSLALAVVLSSS 180

Query: 181 ESHNSNDLNSRLPPPIRPPLHPNGRASRSNSGAAVPLLCKFPPWRSYSLANIQ 233
           ESHNSNDLNSRL PPIRPPLHPNGRASRSNSG+ VPLLCKFP WRSYSLANIQ
Sbjct: 181 ESHNSNDLNSRLSPPIRPPLHPNGRASRSNSGSPVPLLCKFPSWRSYSLANIQ 232

[Close]

BLAST of CcUC08G153770.1 vs. NCBI nr
Match: XP_004144215.1 (uncharacterized protein LOC101211014 [Cucumis sativus] >KGN47579.1 hypothetical protein Csa_019031 [Cucumis sativus])

HSP 1 Score: 364.4 bits (934), Expect = 7.4e-97
Identity = 202/234 (86.32%), Postives = 212/234 (90.60%), Query Frame = 0


Query: 1   MSIALESNSRIPPSVFSQGGLPSYCSVLNTSGINTVVRRETAVADAVAPAEVDRCSSSSS 60
           MSIALE+N     +VFSQ GLPSYCSVLNT+GI  VVRRE A+ADAVAPA+VDRC+SSSS
Sbjct: 1   MSIALETN-----TVFSQPGLPSYCSVLNTTGIIPVVRREAALADAVAPADVDRCTSSSS 60

Query: 61  SSIGENSGFSVRSSDNDDGEDNEAESSYKGPLAMESLEEVLPIRRGISNFYNGKSKSFTS 120
           SSIGENSGFSVRSSDNDDGEDNEAESSYKGPL MESLEEVLPIRRGISNFYNGKSKSFTS
Sbjct: 61  SSIGENSGFSVRSSDNDDGEDNEAESSYKGPLGMESLEEVLPIRRGISNFYNGKSKSFTS 120

Query: 121 LADASSSSSIKDITKPENALSRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSSE 180
           L DASSSSSIKDI KPENA SRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSSE
Sbjct: 121 LVDASSSSSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSSE 180

Query: 181 SHNSNDLNSRLPPP--IRPPLHPNGRASRSNSGAAVPLLCKFPPWRSYSLANIQ 233
            H +NDLNS LPPP  IRPPL+PNGR SR NSG+AVP LCKFP WRSYS+ANIQ
Sbjct: 181 IHKNNDLNSILPPPTLIRPPLYPNGRGSRINSGSAVPSLCKFPTWRSYSMANIQ 229

[Close]

BLAST of CcUC08G153770.1 vs. NCBI nr
Match: XP_022962518.1 (uncharacterized protein LOC111462922 [Cucurbita moschata] >KAG6598596.1 hypothetical protein SDJN03_08374, partial [Cucurbita argyrosperma subsp. sororia] >KAG7029529.1 hypothetical protein SDJN02_07868 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 357.1 bits (915), Expect = 1.2e-94
Identity = 198/233 (84.98%), Postives = 206/233 (88.41%), Query Frame = 0


Query: 1   MSIALESNSRIPPSVFSQGGLPSYCSVLNTSGINTVVRRETAVADAVAPAE-VDRCSSSS 60
           MSIALESNSRIPPSVFSQG LPSYCSVLNT+G+  VVRRE  V D VAPAE VDRCSSSS
Sbjct: 1   MSIALESNSRIPPSVFSQGVLPSYCSVLNTTGVIPVVRREAVVGDVVAPAEVVDRCSSSS 60

Query: 61  SSSIGENSGFSVRSSDNDDGEDNEAESSYKGPLAMESLEEVLPIRRGISNFYNGKSKSFT 120
           SSSIGENS FSVRS ++DDGEDNEAESSYK  L MESLEEVLPIRRGISNFYNGKSKSFT
Sbjct: 61  SSSIGENSDFSVRSVNDDDGEDNEAESSYKESLGMESLEEVLPIRRGISNFYNGKSKSFT 120

Query: 121 SLADASSSSSIKDITKPENALSRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSS 180
           SL DASS+SSIKDI KPENA SRKRRNLLASNLIAGGISKRPIISS  SSLALAV +SSS
Sbjct: 121 SLGDASSTSSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIISSRGSSLALAVFMSSS 180

Query: 181 ESHNSNDLNSRLPPPIRPPLHPNGRASRSNSGAAVPLLCKFPPWRSYSLANIQ 233
           E  +  DLNSRL P IRPPLHP GRASRSNSG+AVPLLCKFP WRSYSLANIQ
Sbjct: 181 ERQSGEDLNSRLSPTIRPPLHPKGRASRSNSGSAVPLLCKFPTWRSYSLANIQ 233

[Close]

BLAST of CcUC08G153770.1 vs. ExPASy TrEMBL
Match: A0A5A7VFP0 (Damaged dna-binding 2, putative isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold187G00100 PE=4 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 1.5e-103
Identity = 209/234 (89.32%), Postives = 218/234 (93.16%), Query Frame = 0


Query: 1   MSIALESNSRIPPSVFSQGGLPSYCSVLNTSGINTVVRRETAVADAVAPAEVDRCSSSSS 60
           MSIALESN+RIPPSVFSQ GLP YCSVLNT+GI  VVRRE AVADAVAP +VDRCSSSSS
Sbjct: 1   MSIALESNTRIPPSVFSQAGLPPYCSVLNTTGIIPVVRREAAVADAVAPEDVDRCSSSSS 60

Query: 61  SSIGENSGFSVRSSDNDDGEDNEAESSYKGPLAMESLEEVLPIRRGISNFYNGKSKSFTS 120
           SSIGENSGFSVRSSDNDDGEDNEAESSY+GPL MESLEEVLPIRRGISNFYNGKSKSFTS
Sbjct: 61  SSIGENSGFSVRSSDNDDGEDNEAESSYRGPLGMESLEEVLPIRRGISNFYNGKSKSFTS 120

Query: 121 LADASSSSSIKDITKPENALSRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSSE 180
           LADASSSSSIK+I KPENA SRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSSE
Sbjct: 121 LADASSSSSIKEIAKPENAFSRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSSE 180

Query: 181 SHNSNDLNSRLPP--PIRPPLHPNGRASRSNSGAAVPLLCKFPPWRSYSLANIQ 233
           SH +NDLNS +PP  PIRPPLHPNGRASR NSG+AVP LCKFP WRSYS+ANIQ
Sbjct: 181 SHKNNDLNSIIPPPTPIRPPLHPNGRASRINSGSAVPSLCKFPTWRSYSMANIQ 234

[Close]

BLAST of CcUC08G153770.1 vs. ExPASy TrEMBL
Match: A0A1S3BCZ8 (uncharacterized protein LOC103488525 OS=Cucumis melo OX=3656 GN=LOC103488525 PE=4 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 1.5e-103
Identity = 209/234 (89.32%), Postives = 218/234 (93.16%), Query Frame = 0


Query: 1   MSIALESNSRIPPSVFSQGGLPSYCSVLNTSGINTVVRRETAVADAVAPAEVDRCSSSSS 60
           MSIALESN+RIPPSVFSQ GLP YCSVLNT+GI  VVRRE AVADAVAP +VDRCSSSSS
Sbjct: 36  MSIALESNTRIPPSVFSQAGLPPYCSVLNTTGIIPVVRREAAVADAVAPEDVDRCSSSSS 95

Query: 61  SSIGENSGFSVRSSDNDDGEDNEAESSYKGPLAMESLEEVLPIRRGISNFYNGKSKSFTS 120
           SSIGENSGFSVRSSDNDDGEDNEAESSY+GPL MESLEEVLPIRRGISNFYNGKSKSFTS
Sbjct: 96  SSIGENSGFSVRSSDNDDGEDNEAESSYRGPLGMESLEEVLPIRRGISNFYNGKSKSFTS 155

Query: 121 LADASSSSSIKDITKPENALSRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSSE 180
           LADASSSSSIK+I KPENA SRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSSE
Sbjct: 156 LADASSSSSIKEIAKPENAFSRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSSE 215

Query: 181 SHNSNDLNSRLPP--PIRPPLHPNGRASRSNSGAAVPLLCKFPPWRSYSLANIQ 233
           SH +NDLNS +PP  PIRPPLHPNGRASR NSG+AVP LCKFP WRSYS+ANIQ
Sbjct: 216 SHKNNDLNSIIPPPTPIRPPLHPNGRASRINSGSAVPSLCKFPTWRSYSMANIQ 269

[Close]

BLAST of CcUC08G153770.1 vs. ExPASy TrEMBL
Match: A0A0A0KFI7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G361410 PE=4 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 3.6e-97
Identity = 202/234 (86.32%), Postives = 212/234 (90.60%), Query Frame = 0


Query: 1   MSIALESNSRIPPSVFSQGGLPSYCSVLNTSGINTVVRRETAVADAVAPAEVDRCSSSSS 60
           MSIALE+N     +VFSQ GLPSYCSVLNT+GI  VVRRE A+ADAVAPA+VDRC+SSSS
Sbjct: 1   MSIALETN-----TVFSQPGLPSYCSVLNTTGIIPVVRREAALADAVAPADVDRCTSSSS 60

Query: 61  SSIGENSGFSVRSSDNDDGEDNEAESSYKGPLAMESLEEVLPIRRGISNFYNGKSKSFTS 120
           SSIGENSGFSVRSSDNDDGEDNEAESSYKGPL MESLEEVLPIRRGISNFYNGKSKSFTS
Sbjct: 61  SSIGENSGFSVRSSDNDDGEDNEAESSYKGPLGMESLEEVLPIRRGISNFYNGKSKSFTS 120

Query: 121 LADASSSSSIKDITKPENALSRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSSE 180
           L DASSSSSIKDI KPENA SRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSSE
Sbjct: 121 LVDASSSSSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSSE 180

Query: 181 SHNSNDLNSRLPPP--IRPPLHPNGRASRSNSGAAVPLLCKFPPWRSYSLANIQ 233
            H +NDLNS LPPP  IRPPL+PNGR SR NSG+AVP LCKFP WRSYS+ANIQ
Sbjct: 181 IHKNNDLNSILPPPTLIRPPLYPNGRGSRINSGSAVPSLCKFPTWRSYSMANIQ 229

[Close]

BLAST of CcUC08G153770.1 vs. ExPASy TrEMBL
Match: A0A6J1HF10 (uncharacterized protein LOC111462922 OS=Cucurbita moschata OX=3662 GN=LOC111462922 PE=4 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 5.7e-95
Identity = 198/233 (84.98%), Postives = 206/233 (88.41%), Query Frame = 0


Query: 1   MSIALESNSRIPPSVFSQGGLPSYCSVLNTSGINTVVRRETAVADAVAPAE-VDRCSSSS 60
           MSIALESNSRIPPSVFSQG LPSYCSVLNT+G+  VVRRE  V D VAPAE VDRCSSSS
Sbjct: 1   MSIALESNSRIPPSVFSQGVLPSYCSVLNTTGVIPVVRREAVVGDVVAPAEVVDRCSSSS 60

Query: 61  SSSIGENSGFSVRSSDNDDGEDNEAESSYKGPLAMESLEEVLPIRRGISNFYNGKSKSFT 120
           SSSIGENS FSVRS ++DDGEDNEAESSYK  L MESLEEVLPIRRGISNFYNGKSKSFT
Sbjct: 61  SSSIGENSDFSVRSVNDDDGEDNEAESSYKESLGMESLEEVLPIRRGISNFYNGKSKSFT 120

Query: 121 SLADASSSSSIKDITKPENALSRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSS 180
           SL DASS+SSIKDI KPENA SRKRRNLLASNLIAGGISKRPIISS  SSLALAV +SSS
Sbjct: 121 SLGDASSTSSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIISSRGSSLALAVFMSSS 180

Query: 181 ESHNSNDLNSRLPPPIRPPLHPNGRASRSNSGAAVPLLCKFPPWRSYSLANIQ 233
           E  +  DLNSRL P IRPPLHP GRASRSNSG+AVPLLCKFP WRSYSLANIQ
Sbjct: 181 ERQSGEDLNSRLSPTIRPPLHPKGRASRSNSGSAVPLLCKFPTWRSYSLANIQ 233

[Close]

BLAST of CcUC08G153770.1 vs. ExPASy TrEMBL
Match: A0A6J1BS00 (uncharacterized protein LOC111004861 OS=Momordica charantia OX=3673 GN=LOC111004861 PE=4 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 8.2e-94
Identity = 195/234 (83.33%), Postives = 213/234 (91.03%), Query Frame = 0


Query: 1   MSIALESNSRIPPSVFSQGGLPSYCSVLNTSGINTVVRRETAVADAVAPA-EVDRCSSSS 60
           MSIAL+ NSRIPPSVFSQGGLPSYCSVLNT+GI  VVRRE AV DAVAPA E+DRCSSSS
Sbjct: 1   MSIALDRNSRIPPSVFSQGGLPSYCSVLNTAGIIPVVRREAAVGDAVAPAEELDRCSSSS 60

Query: 61  SSSIGENSGFSVRSSDN-DDGEDNEAESSYKGPLAMESLEEVLPIRRGISNFYNGKSKSF 120
           SSSIGENSG SV+SSDN DDGE+NEAESSYKGPL MESLEEVLP+RRGISNFYNGKSKSF
Sbjct: 61  SSSIGENSGLSVKSSDNDDDGENNEAESSYKGPLGMESLEEVLPMRRGISNFYNGKSKSF 120

Query: 121 TSLADASSSSSIKDITKPENALSRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSS 180
           TSLA+ASS+++IKDI KPENA SRKRRNLLASNLIAGGISKRP ISSSRSSLALAV + +
Sbjct: 121 TSLAEASSAATIKDIAKPENAYSRKRRNLLASNLIAGGISKRP-ISSSRSSLALAVAMYT 180

Query: 181 SESHNSNDLNSRLPPPIRPPLHPNGRASRSNSGAAVPLLCKFPPWRSYSLANIQ 233
           S SH+S+DLNSR PPPIRPPLHPNGR+SRSN  + V LLCK+P WRSYSLA+IQ
Sbjct: 181 SGSHSSDDLNSRSPPPIRPPLHPNGRSSRSNLASTVHLLCKYPTWRSYSLADIQ 233

[Close]

BLAST of CcUC08G153770.1 vs. TAIR 10
Match: AT5G21940.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G43850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 119.4 bits (298), Expect = 3.8e-27
Identity = 94/212 (44.34%), Postives = 127/212 (59.91%), Query Frame = 0


Query: 56  SSSSSSSIGENSGFSVRSSDN--DDGEDNEAESSYKGPL-AMESLEEVLPIRRGISNFYN 115
           SSS+SSSIG NS    +SS++  DD  +NE ES YKGPL  MESLE+VLP+R+GIS +Y+
Sbjct: 37  SSSASSSIGRNSDDGEKSSEDGGDDAGENEVESPYKGPLEMMESLEQVLPVRKGISKYYS 96

Query: 116 GKSKSFTSL-ADA----SSSSSIKDITKPENALSRKRRNLLASNL-------IAGGISKR 175
           GKSKSFT+L A+A    +SSSS+KD+ KPEN  SR+RRNLL   +         GGISK+
Sbjct: 97  GKSKSFTNLTAEAASALTSSSSMKDLAKPENPYSRRRRNLLCHQIWENNKTTPRGGISKK 156

Query: 176 PIISSSRSSLALAVVLSS------------SESHNSNDLNSRLPP----------PIRPP 231
            ++SSSRS+L LA+ +++              S  S+   S  PP             PP
Sbjct: 157 HVMSSSRSALTLAMAVAAGVMTGEGSSSGGDSSPGSSPTTSGSPPRQLHHHQHQMKKLPP 216

[Close]

BLAST of CcUC08G153770.1 vs. TAIR 10
Match: AT3G43850.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G21940.1); Has 215 Blast hits to 215 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 213; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 104.8 bits (260), Expect = 9.8e-23
Identity = 72/139 (51.80%), Postives = 92/139 (66.19%), Query Frame = 0


Query: 56  SSSSSSSIGENSGFSVRSSDNDDGEDNEAESSYKGPL-AMESLEEVLPIRRGISNFYNGK 115
           SS+SS SIGEN       SD+D+G +NE ESSY GPL  MESLEE LPI+R IS FY GK
Sbjct: 23  SSTSSDSIGEN-------SDDDEGGENEIESSYNGPLDMMESLEEALPIKRAISKFYKGK 82

Query: 116 SKSFTSLADASSSSSIKDITKPENALSRKRRNLLASNLIA-GGISKRPIISSSRSSLALA 175
           SKSF SL++ +SS  +KD+TKPEN  SR+RRNLL+  + + GGISK+P  S         
Sbjct: 83  SKSFMSLSE-TSSLPVKDLTKPENLYSRRRRNLLSHRICSRGGISKKPFKS--------V 142

Query: 176 VVLSSSESHNSNDLNSRLP 193
           + +S  E  +S+  +  LP
Sbjct: 143 LAMSQREGDSSSSGDDSLP 145

[Close]

BLAST of CcUC08G153770.1 vs. TAIR 10
Match: AT2G24550.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G31510.1); Has 219 Blast hits to 219 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 16; Fungi - 2; Plants - 184; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). )

HSP 1 Score: 61.2 bits (147), Expect = 1.2e-09
Identity = 46/105 (43.81%), Postives = 68/105 (64.76%), Query Frame = 0


Query: 56  SSSSSSSIGENSGFSVRSSDNDDGEDNEAESSYKGPL--AMESLEEVLPIRRGISNFYNG 115
           SS SSSSIGE+      S + ++ E+++A S  +G L     SLE+ LPI+RG+SN Y G
Sbjct: 64  SSDSSSSIGES------SENEEEEEEDDAVSCQRGTLDSFSSSLEDSLPIKRGLSNHYVG 123

Query: 116 KSKSFTSLADASSSSSIKDITKPENALSRKRRNLLASNLIAGGIS 159
           KSKSF +L +A+S +  KD+ K EN  +++RR ++A+ L   G S
Sbjct: 124 KSKSFGNLMEAASKA--KDLEKVENPFNKRRRLVIANKLRRRGRS 160

[Close]

BLAST of CcUC08G153770.1 vs. TAIR 10
Match: AT5G24890.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 57.8 bits (138), Expect = 1.4e-08
Identity = 39/98 (39.80%), Postives = 60/98 (61.22%), Query Frame = 0


Query: 57  SSSSSSIGE--NSGFSVRSSDNDDGEDNEAESSYKGPLAMESLEEVLPIRRGISNFYNGK 116
           SS SSSIG   +S      S+N++ + +  E   +G  +M SLE+ LP +RG+SN Y GK
Sbjct: 59  SSDSSSIGTPGDSEEDEEESENENDDVSSKELGLRGLASMSSLEDSLPSKRGLSNHYKGK 118

Query: 117 SKSFTSLADASSSSSIKDITKPENALSRKRRNLLASNL 153
           SKSF +L +     S+K++ K EN L+++RR  + + L
Sbjct: 119 SKSFGNLGEI---GSVKEVAKQENPLNKRRRLQICNKL 153

[Close]

BLAST of CcUC08G153770.1 vs. TAIR 10
Match: AT4G31510.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24550.1); Has 205 Blast hits to 205 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 3; Plants - 187; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 55.8 bits (133), Expect = 5.2e-08
Identity = 59/164 (35.98%), Postives = 86/164 (52.44%), Query Frame = 0


Query: 38  RRETAVADAVAPAEVD------RCSSS----SSSSIGENSGFSVRSSDNDDGEDNEAESS 97
           R      D   PA +       RC  S    SSSS+GE       +S+N++ ED+   SS
Sbjct: 12  RSSVTTHDQAVPASLSSRIGLRRCGRSPPPESSSSVGE-------TSENEEDEDDAVSSS 71

Query: 98  YKGPL--AMESLEEVLPIRRGISNFYNGKSKSFTSLADASSSSSIKDITKPENALSRKRR 157
               L     SLE+ LPI+RG+SN Y GKSKSF +L +AS+++   D+ K E+ L+++RR
Sbjct: 72  QGRWLNSFSSSLEDSLPIKRGLSNHYIGKSKSFGNLMEASNTN---DLVKVESPLNKRRR 131

Query: 158 NLLASNL-IAGGISKRPIIS--SSRSSLALAVVLSSSESHNSND 187
            L+A+ L     +S   I +  +  S   LA+  S +E H  ND
Sbjct: 132 LLIANKLRRRSSLSSFSIYTKINPNSMPLLALQESDNEDHKLND 165

The following BLAST results are available for this feature:

BLAST of CcUC08G153770.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0064705.1	3.1e-103	89.32	Damaged dna-binding 2, putative isoform 1 [Cucumis melo var. makuwa] >TYK00723.1...	[more]
XP_008445543.1	3.1e-103	89.32	PREDICTED: uncharacterized protein LOC103488525 [Cucumis melo]	[more]
XP_038883984.1	1.2e-102	91.42	uncharacterized protein LOC120074946 [Benincasa hispida]	[more]
XP_004144215.1	7.4e-97	86.32	uncharacterized protein LOC101211014 [Cucumis sativus] >KGN47579.1 hypothetical ...	[more]
XP_022962518.1	1.2e-94	84.98	uncharacterized protein LOC111462922 [Cucurbita moschata] >KAG6598596.1 hypothet...	[more]

BLAST of CcUC08G153770.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CcUC08G153770.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VFP0	1.5e-103	89.32	Damaged dna-binding 2, putative isoform 1 OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A1S3BCZ8	1.5e-103	89.32	uncharacterized protein LOC103488525 OS=Cucumis melo OX=3656 GN=LOC103488525 PE=...	[more]
A0A0A0KFI7	3.6e-97	86.32	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G361410 PE=4 SV=1	[more]
A0A6J1HF10	5.7e-95	84.98	uncharacterized protein LOC111462922 OS=Cucurbita moschata OX=3662 GN=LOC1114629...	[more]
A0A6J1BS00	8.2e-94	83.33	uncharacterized protein LOC111004861 OS=Momordica charantia OX=3673 GN=LOC111004...	[more]

BLAST of CcUC08G153770.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G21940.1	3.8e-27	44.34	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G43850.1	9.8e-23	51.80	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G24550.1	1.2e-09	43.81	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G24890.1	1.4e-08	39.80	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT4G31510.1	5.2e-08	35.98	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 181..209
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 48..91
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..73
None	No IPR available	PANTHER	PTHR33172	OS08G0516900 PROTEIN	coord: 38..232
None	No IPR available	PANTHER	PTHR33172:SF37	MYOSIN LIGHT CHAIN KINASE DDB_G0279831 ISOFORM X1-RELATED	coord: 38..232

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CcUC08G153770	CcUC08G153770	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC08G153770.1-exon	CcUC08G153770.1-exon-CicolChr08:22205934..22206730	exon
CcUC08G153770.1-exon	CcUC08G153770.1-exon-CicolChr08:22206891..22208181	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC08G153770.1-five_prime_utr	CcUC08G153770.1-five_prime_utr-CicolChr08:22205934..22206419	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC08G153770.1-cds	CcUC08G153770.1-cds-CicolChr08:22206420..22206730	CDS
CcUC08G153770.1-cds	CcUC08G153770.1-cds-CicolChr08:22206891..22207278	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC08G153770.1-three_prime_utr	CcUC08G153770.1-three_prime_utr-CicolChr08:22207279..22208181	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CcUC08G153770.1	CcUC08G153770.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding