CcUC06G121690.1 (mRNA) Watermelon (PI 537277) v1

Overview


Name	CcUC06G121690.1
Type	mRNA
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Serine-rich protein-related
Location	CicolChr06: 24104788 .. 24105344 (-)
Sequence length	480
RNA-Seq Expression	CcUC06G121690.1
Synteny	CcUC06G121690.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAATTTTCAAAGAAGTTCGAGGGACAATAACGTAATTTAAAATATTCAAACTCAATATAAAAATAGGGGTGAAGAAATTAAAAAGGAAGAACCTCAAACTCAATACAGCAATCTTGTTCCACAAGTTTTCCCTCACAAAAAGGAAAAAAAAGAAAAAGAAATCACTCCACAAAAATCACTCCCAAATTCCACAAACTCTCGTCCACTGCTCAATTCAATGGCCTCGAAATATGGATCCTCCAATCCGAAATTGCAAAGCATCGCCGGTTCAAGGAAGTGTCTTTGTTCTCCGACCACCCATCCCGGCTCTTTCCGCTGCAGTTTTCACCGGAACCGCCGCAAGGTCTCCTCCGCTAGGTCGTCTTCATCCATTTCCGCCATTACCACTGCGCAATTGGAGCTTGCAATGTTCGCGAAGGCGAATGCGTTGAGAGCGTTTCTTCTGCAGATGATTAAGCCGTCGAGTAACGATCTACAACGGCGGAGGAATTTTCATCCTAGACCTTCCAGGTTTTGTTTGATGAACAATCATGGAACTGGATTGACTGTTTCTTGA

mRNA sequence

AAAATTTTCAAAGAAGTTCGAGGGACAATAACCAATCTTGTTCCACAAGTTTTCCCTCACAAAAAGGAAAAAAAAGAAAAAGAAATCACTCCACAAAAATCACTCCCAAATTCCACAAACTCTCGTCCACTGCTCAATTCAATGGCCTCGAAATATGGATCCTCCAATCCGAAATTGCAAAGCATCGCCGGTTCAAGGAAGTGTCTTTGTTCTCCGACCACCCATCCCGGCTCTTTCCGCTGCAGTTTTCACCGGAACCGCCGCAAGGTCTCCTCCGCTAGGTCGTCTTCATCCATTTCCGCCATTACCACTGCGCAATTGGAGCTTGCAATGTTCGCGAAGGCGAATGCGTTGAGAGCGTTTCTTCTGCAGATGATTAAGCCGTCGAGTAACGATCTACAACGGCGGAGGAATTTTCATCCTAGACCTTCCAGGTTTTGTTTGATGAACAATCATGGAACTGGATTGACTGTTTCTTGA

Coding sequence (CDS)

AAAATTTTCAAAGAAGTTCGAGGGACAATAACCAATCTTGTTCCACAAGTTTTCCCTCACAAAAAGGAAAAAAAAGAAAAAGAAATCACTCCACAAAAATCACTCCCAAATTCCACAAACTCTCGTCCACTGCTCAATTCAATGGCCTCGAAATATGGATCCTCCAATCCGAAATTGCAAAGCATCGCCGGTTCAAGGAAGTGTCTTTGTTCTCCGACCACCCATCCCGGCTCTTTCCGCTGCAGTTTTCACCGGAACCGCCGCAAGGTCTCCTCCGCTAGGTCGTCTTCATCCATTTCCGCCATTACCACTGCGCAATTGGAGCTTGCAATGTTCGCGAAGGCGAATGCGTTGAGAGCGTTTCTTCTGCAGATGATTAAGCCGTCGAGTAACGATCTACAACGGCGGAGGAATTTTCATCCTAGACCTTCCAGGTTTTGTTTGATGAACAATCATGGAACTGGATTGACTGTTTCTTGA

Protein sequence

KIFKEVRGTITNLVPQVFPHKKEKKEKEITPQKSLPNSTNSRPLLNSMASKYGSSNPKLQSIAGSRKCLCSPTTHPGSFRCSFHRNRRKVSSARSSSSISAITTAQLELAMFAKANALRAFLLQMIKPSSNDLQRRRNFHPRPSRFCLMNNHGTGLTVS

Homology

[Close]

BLAST of CcUC06G121690.1 vs. NCBI nr
Match: XP_023515429.1 (uncharacterized protein LOC111779591 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 187.2 bits (474), Expect = 1.1e-43
Identity = 95/112 (84.82%), Postives = 101/112 (90.18%), Query Frame = 0


Query: 48  MASKYGSSNPKLQSIAGSRKCLCSPTTHPGSFRCSFHRNRRKVSSARSSSSISAITTAQL 107
           MASK GSSNPKLQSI GSRKCLCSPTTHPGSFRCS HRNRRKVS+  SSSSI+AITTAQL
Sbjct: 1   MASKSGSSNPKLQSIGGSRKCLCSPTTHPGSFRCSIHRNRRKVSARSSSSSIAAITTAQL 60

Query: 108 ELAMFAKANALRAFLLQMIKPSSNDLQRRRNFHPRPSRFCLMNNHGTGLTVS 160
           +L M AKANALR+FLLQ+I PSS DLQRRRNF P+PSRFCLMNNHGTGL VS
Sbjct: 61  KLTMLAKANALRSFLLQIINPSSKDLQRRRNFRPKPSRFCLMNNHGTGLAVS 112

[Close]

BLAST of CcUC06G121690.1 vs. NCBI nr
Match: XP_022921799.1 (uncharacterized protein LOC111429944 [Cucurbita moschata] >KAG7023478.1 hypothetical protein SDJN02_14503, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 184.9 bits (468), Expect = 5.5e-43
Identity = 94/112 (83.93%), Postives = 100/112 (89.29%), Query Frame = 0


Query: 48  MASKYGSSNPKLQSIAGSRKCLCSPTTHPGSFRCSFHRNRRKVSSARSSSSISAITTAQL 107
           MASK GSSNPKLQSI GSRKCLCSPTTHPGSFRCS HRNRRKVS+  SSSSI+AITTAQL
Sbjct: 1   MASKSGSSNPKLQSIGGSRKCLCSPTTHPGSFRCSIHRNRRKVSARSSSSSIAAITTAQL 60

Query: 108 ELAMFAKANALRAFLLQMIKPSSNDLQRRRNFHPRPSRFCLMNNHGTGLTVS 160
           +L M AKANALR+FL Q+I PSS DLQRRRNF P+PSRFCLMNNHGTGL VS
Sbjct: 61  KLTMLAKANALRSFLQQIINPSSKDLQRRRNFRPKPSRFCLMNNHGTGLAVS 112

[Close]

BLAST of CcUC06G121690.1 vs. NCBI nr
Match: XP_022927032.1 (uncharacterized protein LOC111433980 [Cucurbita moschata] >KAG7021749.1 hypothetical protein SDJN02_15476, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 179.5 bits (454), Expect = 2.3e-41
Identity = 90/112 (80.36%), Postives = 99/112 (88.39%), Query Frame = 0


Query: 48  MASKYGSSNPKLQSIAGSRKCLCSPTTHPGSFRCSFHRNRRKVSSARSSSSISAITTAQL 107
           MA+K  S N KLQS+  SRKCLCSPTTHPGSFRCSFHRNRRK S+  SSSSI+AIT+AQL
Sbjct: 1   MATKSRSVNSKLQSVGSSRKCLCSPTTHPGSFRCSFHRNRRKASARSSSSSITAITSAQL 60

Query: 108 ELAMFAKANALRAFLLQMIKPSSNDLQRRRNFHPRPSRFCLMNNHGTGLTVS 160
           EL +FAKANA+RAFLL +I+PSSNDLQRRRNFHPRPSRFCLMN HGTGL VS
Sbjct: 61  ELTVFAKANAVRAFLLHIIRPSSNDLQRRRNFHPRPSRFCLMNKHGTGLAVS 112

[Close]

BLAST of CcUC06G121690.1 vs. NCBI nr
Match: XP_023003805.1 (uncharacterized protein LOC111497277 [Cucurbita maxima])

HSP 1 Score: 177.6 bits (449), Expect = 8.7e-41
Identity = 90/112 (80.36%), Postives = 99/112 (88.39%), Query Frame = 0


Query: 48  MASKYGSSNPKLQSIAGSRKCLCSPTTHPGSFRCSFHRNRRKVSSARSSSSISAITTAQL 107
           MA+K  S+N KLQS+  SRKCLCSPTTHPGSFRCSFHRNRRK S+  SSSSISAIT+AQL
Sbjct: 1   MATKSRSANSKLQSVGSSRKCLCSPTTHPGSFRCSFHRNRRKASARSSSSSISAITSAQL 60

Query: 108 ELAMFAKANALRAFLLQMIKPSSNDLQRRRNFHPRPSRFCLMNNHGTGLTVS 160
           EL +FAKANA+RAFLL +I+PSSNDLQRRRNF PRPSRFCLMN HGTGL VS
Sbjct: 61  ELTVFAKANAVRAFLLHIIRPSSNDLQRRRNFLPRPSRFCLMNKHGTGLAVS 112

[Close]

BLAST of CcUC06G121690.1 vs. NCBI nr
Match: XP_023530962.1 (uncharacterized protein LOC111793349 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 176.0 bits (445), Expect = 2.5e-40
Identity = 88/112 (78.57%), Postives = 98/112 (87.50%), Query Frame = 0


Query: 48  MASKYGSSNPKLQSIAGSRKCLCSPTTHPGSFRCSFHRNRRKVSSARSSSSISAITTAQL 107
           MA+K  S N KLQS+  SRKCLCSPTTHPGSFRCSFHRNRRK S+  SSSSI+AIT+AQL
Sbjct: 1   MATKSRSVNSKLQSVGSSRKCLCSPTTHPGSFRCSFHRNRRKASARSSSSSITAITSAQL 60

Query: 108 ELAMFAKANALRAFLLQMIKPSSNDLQRRRNFHPRPSRFCLMNNHGTGLTVS 160
           EL ++AKANA+RAFLL +I+PSSNDLQRRRNFHP PSRFCLMN HGTGL VS
Sbjct: 61  ELTVYAKANAVRAFLLHIIRPSSNDLQRRRNFHPSPSRFCLMNKHGTGLAVS 112

[Close]

BLAST of CcUC06G121690.1 vs. ExPASy TrEMBL
Match: A0A6J1E1K3 (uncharacterized protein LOC111429944 OS=Cucurbita moschata OX=3662 GN=LOC111429944 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 2.6e-43
Identity = 94/112 (83.93%), Postives = 100/112 (89.29%), Query Frame = 0


Query: 48  MASKYGSSNPKLQSIAGSRKCLCSPTTHPGSFRCSFHRNRRKVSSARSSSSISAITTAQL 107
           MASK GSSNPKLQSI GSRKCLCSPTTHPGSFRCS HRNRRKVS+  SSSSI+AITTAQL
Sbjct: 1   MASKSGSSNPKLQSIGGSRKCLCSPTTHPGSFRCSIHRNRRKVSARSSSSSIAAITTAQL 60

Query: 108 ELAMFAKANALRAFLLQMIKPSSNDLQRRRNFHPRPSRFCLMNNHGTGLTVS 160
           +L M AKANALR+FL Q+I PSS DLQRRRNF P+PSRFCLMNNHGTGL VS
Sbjct: 61  KLTMLAKANALRSFLQQIINPSSKDLQRRRNFRPKPSRFCLMNNHGTGLAVS 112

[Close]

BLAST of CcUC06G121690.1 vs. ExPASy TrEMBL
Match: A0A6J1EG01 (uncharacterized protein LOC111433980 OS=Cucurbita moschata OX=3662 GN=LOC111433980 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 1.1e-41
Identity = 90/112 (80.36%), Postives = 99/112 (88.39%), Query Frame = 0


Query: 48  MASKYGSSNPKLQSIAGSRKCLCSPTTHPGSFRCSFHRNRRKVSSARSSSSISAITTAQL 107
           MA+K  S N KLQS+  SRKCLCSPTTHPGSFRCSFHRNRRK S+  SSSSI+AIT+AQL
Sbjct: 1   MATKSRSVNSKLQSVGSSRKCLCSPTTHPGSFRCSFHRNRRKASARSSSSSITAITSAQL 60

Query: 108 ELAMFAKANALRAFLLQMIKPSSNDLQRRRNFHPRPSRFCLMNNHGTGLTVS 160
           EL +FAKANA+RAFLL +I+PSSNDLQRRRNFHPRPSRFCLMN HGTGL VS
Sbjct: 61  ELTVFAKANAVRAFLLHIIRPSSNDLQRRRNFHPRPSRFCLMNKHGTGLAVS 112

[Close]

BLAST of CcUC06G121690.1 vs. ExPASy TrEMBL
Match: A0A6J1KSU0 (uncharacterized protein LOC111497277 OS=Cucurbita maxima OX=3661 GN=LOC111497277 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 4.2e-41
Identity = 90/112 (80.36%), Postives = 99/112 (88.39%), Query Frame = 0


Query: 48  MASKYGSSNPKLQSIAGSRKCLCSPTTHPGSFRCSFHRNRRKVSSARSSSSISAITTAQL 107
           MA+K  S+N KLQS+  SRKCLCSPTTHPGSFRCSFHRNRRK S+  SSSSISAIT+AQL
Sbjct: 1   MATKSRSANSKLQSVGSSRKCLCSPTTHPGSFRCSFHRNRRKASARSSSSSISAITSAQL 60

Query: 108 ELAMFAKANALRAFLLQMIKPSSNDLQRRRNFHPRPSRFCLMNNHGTGLTVS 160
           EL +FAKANA+RAFLL +I+PSSNDLQRRRNF PRPSRFCLMN HGTGL VS
Sbjct: 61  ELTVFAKANAVRAFLLHIIRPSSNDLQRRRNFLPRPSRFCLMNKHGTGLAVS 112

[Close]

BLAST of CcUC06G121690.1 vs. ExPASy TrEMBL
Match: A0A0A0LYY6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G264520 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 3.4e-38
Identity = 90/113 (79.65%), Postives = 96/113 (84.96%), Query Frame = 0


Query: 48  MASKYGSSNPKLQSIAGSRKCLCSPTTHPGSFRCSFHRNRRKVSSAR-SSSSISAITTAQ 107
           MASK GSS  K  +   SRKCLCSPTTHPGSFRCSFHRNR K+SS+R SSSS+S ITTA 
Sbjct: 1   MASKSGSSTHKFPTNGASRKCLCSPTTHPGSFRCSFHRNRHKISSSRSSSSSLSLITTAD 60

Query: 108 LELAMFAKANALRAFLLQMIKPSSNDLQRRRNFHPRPSRFCLMNNHGTGLTVS 160
           LEL   AKANALR+FLLQMIKPSSNDLQRRRNFHPRPSRFCLMN+H TGL VS
Sbjct: 61  LEL---AKANALRSFLLQMIKPSSNDLQRRRNFHPRPSRFCLMNDHATGLAVS 110

[Close]

BLAST of CcUC06G121690.1 vs. ExPASy TrEMBL
Match: A0A5A7U6S1 (Serine-rich protein-related OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold25870G00010 PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 4.4e-38
Identity = 90/112 (80.36%), Postives = 94/112 (83.93%), Query Frame = 0


Query: 48  MASKYGSSNPKLQSIAGSRKCLCSPTTHPGSFRCSFHRNRRKVSSARSSSSISAITTAQL 107
           MASK GSS  K  S AGSRKCLCSPTTHPGSFRCSFHR R K+SS RSSSS      A+L
Sbjct: 1   MASKSGSSTHKFPSTAGSRKCLCSPTTHPGSFRCSFHRTRHKISSTRSSSS------AEL 60

Query: 108 ELAMFAKANALRAFLLQMIKPSSNDLQRRRNFHPRPSRFCLMNNHGTGLTVS 160
           EL   AKANALRAFLLQMIKPSSND+QRRRNFHPRPSRFCLMN+HGTGLTVS
Sbjct: 61  EL---AKANALRAFLLQMIKPSSNDVQRRRNFHPRPSRFCLMNDHGTGLTVS 103

[Close]

BLAST of CcUC06G121690.1 vs. TAIR 10
Match: AT5G11090.1 (serine-rich protein-related )

HSP 1 Score: 66.6 bits (161), Expect = 2.0e-11
Identity = 41/96 (42.71%), Postives = 55/96 (57.29%), Query Frame = 0


Query: 65  SRKCLCSPTTHPGSFRCSFHRNRRKVSSARSSSSISAITTAQLELAMFAKANAL------ 124
           SR+C+CSPTTHPGSFRCS H+N   V++     + S  TT  L +   A  N+L      
Sbjct: 120 SRRCMCSPTTHPGSFRCSLHKN---VANPHGQGTAS-YTTNGLNMRRSAMTNSLVRIGGV 179

Query: 125 -----RAFLLQMIKPSSNDLQRRRNFHPRPSRFCLM 150
                R  L  +I+PSS+ L+RR  + PRPSR  +M
Sbjct: 180 EGEWVRRALTTLIRPSSHHLKRRAAYQPRPSRLSIM 211

[Close]

BLAST of CcUC06G121690.1 vs. TAIR 10
Match: AT5G25280.1 (serine-rich protein-related )

HSP 1 Score: 57.8 bits (138), Expect = 9.4e-09
Identity = 46/135 (34.07%), Postives = 68/135 (50.37%), Query Frame = 0


Query: 27  KEITPQKSLPNSTNSRPLLNSMASKYGSSNPKLQSIAGSRKCLCSPTTHPGSFRCSFHRN 86
           + I+P +S+  S+N             S++ K+      R+C+CSPTTHPGSFRCS H+N
Sbjct: 98  RSISPNRSIAVSSNK-----------PSNHHKIPD--SRRRCMCSPTTHPGSFRCSLHKN 157

Query: 87  RRKVSSARSSSSISAITTAQLELAMFAKANAL-----------RAFLLQMIKPSSNDLQR 146
              V++     + S  TT  L +   A  N+L           R  L  +I+PSS+ L+R
Sbjct: 158 ---VANPHGQGTAS-YTTNGLNMRRSAMTNSLVRIGGVEGEWVRRALTTLIRPSSHQLKR 215

Query: 147 RRNFHPRPSRFCLMN 151
           R  + PR SR   M+
Sbjct: 218 RSAYEPRRSRLASMS 215

[Close]

BLAST of CcUC06G121690.1 vs. TAIR 10
Match: AT5G25280.2 (serine-rich protein-related )

HSP 1 Score: 57.8 bits (138), Expect = 9.4e-09
Identity = 46/135 (34.07%), Postives = 68/135 (50.37%), Query Frame = 0


Query: 27  KEITPQKSLPNSTNSRPLLNSMASKYGSSNPKLQSIAGSRKCLCSPTTHPGSFRCSFHRN 86
           + I+P +S+  S+N             S++ K+      R+C+CSPTTHPGSFRCS H+N
Sbjct: 98  RSISPNRSIAVSSNK-----------PSNHHKIPD--SRRRCMCSPTTHPGSFRCSLHKN 157

Query: 87  RRKVSSARSSSSISAITTAQLELAMFAKANAL-----------RAFLLQMIKPSSNDLQR 146
              V++     + S  TT  L +   A  N+L           R  L  +I+PSS+ L+R
Sbjct: 158 ---VANPHGQGTAS-YTTNGLNMRRSAMTNSLVRIGGVEGEWVRRALTTLIRPSSHQLKR 215

Query: 147 RRNFHPRPSRFCLMN 151
           R  + PR SR   M+
Sbjct: 218 RSAYEPRRSRLASMS 215

[Close]

BLAST of CcUC06G121690.1 vs. TAIR 10
Match: AT5G20370.1 (serine-rich protein-related )

HSP 1 Score: 56.6 bits (135), Expect = 2.1e-08
Identity = 41/102 (40.20%), Postives = 49/102 (48.04%), Query Frame = 0


Query: 66  RKCLCSPTTHPGSFRCSFHRN-RRKVSSARSSSSI--------SAITTAQLELAMFAKAN 125
           RKCLCSPTTHPGSFRCSFHR    + S   +SS++        +      L L   A  N
Sbjct: 69  RKCLCSPTTHPGSFRCSFHRRLEHEKSKTLASSTVKRNNRGDNTIRVNVGLNLRKLALMN 128

Query: 126 AL------------RAFLLQMIKPSSNDLQRRRNFHPRPSRF 147
           +L            R+    + KPSS    RR  F PR SRF
Sbjct: 129 SLAKIGSVEAERFRRSLAANLAKPSSLHSHRRPEFRPRLSRF 170

[Close]

BLAST of CcUC06G121690.1 vs. TAIR 10
Match: AT1G67910.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24577.1); Has 167 Blast hits to 167 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 43.5 bits (101), Expect = 1.8e-04
Identity = 20/38 (52.63%), Postives = 23/38 (60.53%), Query Frame = 0


Query: 49 ASKYGSSNPKLQSIAGSRKCLCSPTTHPGSFRCSFHRN 87
          A + GS     Q+      CLCSPTTHPGSFRC  HR+
Sbjct: 25 AVEVGSRGLSRQTSMTKTNCLCSPTTHPGSFRCRIHRS 62

The following BLAST results are available for this feature:

BLAST of CcUC06G121690.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023515429.1	1.1e-43	84.82	uncharacterized protein LOC111779591 [Cucurbita pepo subsp. pepo]	[more]
XP_022921799.1	5.5e-43	83.93	uncharacterized protein LOC111429944 [Cucurbita moschata] >KAG7023478.1 hypothet...	[more]
XP_022927032.1	2.3e-41	80.36	uncharacterized protein LOC111433980 [Cucurbita moschata] >KAG7021749.1 hypothet...	[more]
XP_023003805.1	8.7e-41	80.36	uncharacterized protein LOC111497277 [Cucurbita maxima]	[more]
XP_023530962.1	2.5e-40	78.57	uncharacterized protein LOC111793349 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CcUC06G121690.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CcUC06G121690.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E1K3	2.6e-43	83.93	uncharacterized protein LOC111429944 OS=Cucurbita moschata OX=3662 GN=LOC1114299...	[more]
A0A6J1EG01	1.1e-41	80.36	uncharacterized protein LOC111433980 OS=Cucurbita moschata OX=3662 GN=LOC1114339...	[more]
A0A6J1KSU0	4.2e-41	80.36	uncharacterized protein LOC111497277 OS=Cucurbita maxima OX=3661 GN=LOC111497277...	[more]
A0A0A0LYY6	3.4e-38	79.65	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G264520 PE=4 SV=1	[more]
A0A5A7U6S1	4.4e-38	80.36	Serine-rich protein-related OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]

BLAST of CcUC06G121690.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G11090.1	2.0e-11	42.71	serine-rich protein-related	[more]
AT5G25280.1	9.4e-09	34.07	serine-rich protein-related	[more]
AT5G25280.2	9.4e-09	34.07	serine-rich protein-related	[more]
AT5G20370.1	2.1e-08	40.20	serine-rich protein-related	[more]
AT1G67910.1	1.8e-04	52.63	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 18..43
None	No IPR available	PANTHER	PTHR33132:SF63	SUBFAMILY NOT NAMED	coord: 60..153
None	No IPR available	PANTHER	PTHR33132	OSJNBB0118P14.9 PROTEIN	coord: 60..153

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CcUC06G121690	CcUC06G121690	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC06G121690.1-exon	CcUC06G121690.1-exon-CicolChr06:24104788..24105235	exon
CcUC06G121690.1-exon	CcUC06G121690.1-exon-CicolChr06:24105313..24105344	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC06G121690.1-cds	CcUC06G121690.1-cds-CicolChr06:24104788..24105235	CDS
CcUC06G121690.1-cds	CcUC06G121690.1-cds-CicolChr06:24105313..24105344	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CcUC06G121690.1	CcUC06G121690.1-protein	polypeptide