CcUC05G103670.1 (mRNA) Watermelon (PI 537277) v1

Overview


Name	CcUC05G103670.1
Type	mRNA
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	cyclin-dependent protein kinase inhibitor SMR1-like
Location	CicolChr05: 31374162 .. 31374539 (-)
Sequence length	378
RNA-Seq Expression	CcUC05G103670.1
Synteny	CcUC05G103670.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCACAGACCTCGATCTCCGACGGACATTGCTGGAAATCGTCCGCCGTCCGGCCATCAACCTTCAAATTCCACGCCCGTCGACTTCAATGAGCGGCGATCACGGCGGTGTGATAATTCAGAAAGACAGAATCGACGACGAAGTATTATGTTGCCGTACACCGACGTCGGCAGAGAACAAGATTCCGGCGGTGGTGCAATGTCCGCCGGCTCCACGTAAGCGGAAGAGACCGCCGAGTTGTAGAAGAAGATTAATGGAGCTTGAATTTGTGGAGATCGTGAATAGAGAAGAAATCGAACCGTATTTAAGATCGAGTTTCGATCACGAAGACAGAGTAAGAAAATCGGCTAAAAGAAGCTTTTGCGAGTGTAAATGA

mRNA sequence

ATGTCCACAGACCTCGATCTCCGACGGACATTGCTGGAAATCGTCCGCCGTCCGGCCATCAACCTTCAAATTCCACGCCCGTCGACTTCAATGAGCGGCGATCACGGCGGTGTGATAATTCAGAAAGACAGAATCGACGACGAAGTATTATGTTGCCGTACACCGACGTCGGCAGAGAACAAGATTCCGGCGGTGGTGCAATGTCCGCCGGCTCCACGTAAGCGGAAGAGACCGCCGAGTTGTAGAAGAAGATTAATGGAGCTTGAATTTGTGGAGATCGTGAATAGAGAAGAAATCGAACCGTATTTAAGATCGAGTTTCGATCACGAAGACAGAGTAAGAAAATCGGCTAAAAGAAGCTTTTGCGAGTGTAAATGA

Coding sequence (CDS)

ATGTCCACAGACCTCGATCTCCGACGGACATTGCTGGAAATCGTCCGCCGTCCGGCCATCAACCTTCAAATTCCACGCCCGTCGACTTCAATGAGCGGCGATCACGGCGGTGTGATAATTCAGAAAGACAGAATCGACGACGAAGTATTATGTTGCCGTACACCGACGTCGGCAGAGAACAAGATTCCGGCGGTGGTGCAATGTCCGCCGGCTCCACGTAAGCGGAAGAGACCGCCGAGTTGTAGAAGAAGATTAATGGAGCTTGAATTTGTGGAGATCGTGAATAGAGAAGAAATCGAACCGTATTTAAGATCGAGTTTCGATCACGAAGACAGAGTAAGAAAATCGGCTAAAAGAAGCTTTTGCGAGTGTAAATGA

Protein sequence

MSTDLDLRRTLLEIVRRPAINLQIPRPSTSMSGDHGGVIIQKDRIDDEVLCCRTPTSAENKIPAVVQCPPAPRKRKRPPSCRRRLMELEFVEIVNREEIEPYLRSSFDHEDRVRKSAKRSFCECK

Homology

[Close]

BLAST of CcUC05G103670.1 vs. NCBI nr
Match: XP_038893025.1 (cyclin-dependent protein kinase inhibitor SMR1-like [Benincasa hispida])

HSP 1 Score: 235.3 bits (599), Expect = 2.8e-58
Identity = 119/127 (93.70%), Postives = 120/127 (94.49%), Query Frame = 0


Query: 1   MSTDLDLRRTLLEIVRRPAINLQIPRPSTSMSGDHGGVIIQKDRIDD--EVLCCRTPTSA 60
           MSTDLDLRRTLLEIVRRP I LQIP PSTSM+GDHGGVIIQKDRI D  E LCCRTPTSA
Sbjct: 1   MSTDLDLRRTLLEIVRRPPIKLQIPLPSTSMAGDHGGVIIQKDRITDEEEELCCRTPTSA 60

Query: 61  ENKIPAVVQCPPAPRKRKRPPSCRRRLMELEFVEIVNREEIEPYLRSSFDHEDRVRKSAK 120
           ENKIPAVVQCPPAPRKRKRPPSCRRRLMELEFVEIVNREEIEPYLRSSFDHEDRVRKSAK
Sbjct: 61  ENKIPAVVQCPPAPRKRKRPPSCRRRLMELEFVEIVNREEIEPYLRSSFDHEDRVRKSAK 120

Query: 121 RSFCECK 126
           RSFCECK
Sbjct: 121 RSFCECK 127

[Close]

BLAST of CcUC05G103670.1 vs. NCBI nr
Match: XP_008446800.1 (PREDICTED: cyclin-dependent protein kinase inhibitor SMR1-like [Cucumis melo] >KAA0034681.1 cyclin-dependent protein kinase inhibitor SMR1-like [Cucumis melo var. makuwa] >TYK09232.1 cyclin-dependent protein kinase inhibitor SMR1-like [Cucumis melo var. makuwa])

HSP 1 Score: 216.5 bits (550), Expect = 1.3e-52
Identity = 112/133 (84.21%), Postives = 117/133 (87.97%), Query Frame = 0


Query: 1   MSTDLDLRRTLLEIVRRPAINLQIPRPSTS--MSGDHGGVIIQKDRIDD------EVLCC 60
           MST+LDLRRTLLEIVRRP I LQIP PST+  M GD GGVIIQKDRID       E LCC
Sbjct: 1   MSTELDLRRTLLEIVRRPPIKLQIPLPSTAVVMGGDRGGVIIQKDRIDKGEDGGAEELCC 60

Query: 61  RTPTSAENKIPAVVQCPPAPRKRKRPPSCRRRLMELEFVEIVNREEIEPYLRSSFDHEDR 120
           RTPTSAENKIPAVVQCPPAPRKRKRPPSCRRRLMELEFVEIV+R+EIEPYL +SFDHEDR
Sbjct: 61  RTPTSAENKIPAVVQCPPAPRKRKRPPSCRRRLMELEFVEIVHRDEIEPYLNASFDHEDR 120

Query: 121 VRKSAKRSFCECK 126
           VRKSAKRSFCECK
Sbjct: 121 VRKSAKRSFCECK 133

[Close]

BLAST of CcUC05G103670.1 vs. NCBI nr
Match: XP_022992922.1 (cyclin-dependent protein kinase inhibitor SMR1-like [Cucurbita maxima])

HSP 1 Score: 216.1 bits (549), Expect = 1.7e-52
Identity = 107/130 (82.31%), Postives = 117/130 (90.00%), Query Frame = 0


Query: 1   MSTDLDLRRTLLEIVRRPAINLQIPRPSTSMSGDHGGVIIQKDRID-----DEVLCCRTP 60
           MSTDLDLRRTLLE+VRRPAI LQIPRP +SM+ DHGGVIIQK+RID     DE LCCRTP
Sbjct: 1   MSTDLDLRRTLLEVVRRPAIKLQIPRPLSSMAADHGGVIIQKERIDNIDGGDEELCCRTP 60

Query: 61  TSAENKIPAVVQCPPAPRKRKRPPSCRRRLMELEFVEIVNREEIEPYLRSSFDHEDRVRK 120
           TSAENKIP V+QCPPAPRKRKRPP+CRRRL+ELEFVEIV+REEIEPY  SSFDHE+RV+K
Sbjct: 61  TSAENKIPVVLQCPPAPRKRKRPPTCRRRLIELEFVEIVSREEIEPYFTSSFDHENRVKK 120

Query: 121 SAKRSFCECK 126
           SAK SFCECK
Sbjct: 121 SAKISFCECK 130

[Close]

BLAST of CcUC05G103670.1 vs. NCBI nr
Match: XP_022957068.1 (cyclin-dependent protein kinase inhibitor SMR1-like [Cucurbita moschata] >KAG6601198.1 hypothetical protein SDJN03_06431, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031993.1 hypothetical protein SDJN02_06035, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 214.2 bits (544), Expect = 6.6e-52
Identity = 106/130 (81.54%), Postives = 117/130 (90.00%), Query Frame = 0


Query: 1   MSTDLDLRRTLLEIVRRPAINLQIPRPSTSMSGDHGGVIIQKDRIDD-----EVLCCRTP 60
           MSTDLDLRRTLLE+VRRPAI LQIPRP +SM+ DHGGVIIQK+RID+     E LCCRTP
Sbjct: 1   MSTDLDLRRTLLEVVRRPAIKLQIPRPLSSMAADHGGVIIQKERIDNIDGGAEELCCRTP 60

Query: 61  TSAENKIPAVVQCPPAPRKRKRPPSCRRRLMELEFVEIVNREEIEPYLRSSFDHEDRVRK 120
           TSAENKIP V+QCPPAPRKRKRPP+CRRRL+ELEFVEIV+REEIEPY  SSFDHE+RV+K
Sbjct: 61  TSAENKIPVVLQCPPAPRKRKRPPTCRRRLIELEFVEIVSREEIEPYFTSSFDHENRVKK 120

Query: 121 SAKRSFCECK 126
           SAK SFCECK
Sbjct: 121 SAKISFCECK 130

[Close]

BLAST of CcUC05G103670.1 vs. NCBI nr
Match: XP_011655851.1 (cyclin-dependent protein kinase inhibitor SMR1 [Cucumis sativus] >KGN52223.1 hypothetical protein Csa_009104 [Cucumis sativus])

HSP 1 Score: 214.2 bits (544), Expect = 6.6e-52
Identity = 111/134 (82.84%), Postives = 117/134 (87.31%), Query Frame = 0


Query: 1   MSTDLDLRRTLLEIVRRPAINLQIPRPSTSMS----GDHGGVIIQKDRIDD-----EVLC 60
           MST+LDLRRTLLEIVRRP I LQIP P+TS S    GDHGGVIIQKDR+D+     E L 
Sbjct: 1   MSTELDLRRTLLEIVRRPPIKLQIPPPTTSTSVMAGGDHGGVIIQKDRVDEEDGGAEELS 60

Query: 61  CRTPTSAENKIPAVVQCPPAPRKRKRPPSCRRRLMELEFVEIVNREEIEPYLRSSFDHED 120
           CRTPTSAENKIPAV QCPPAPRKRKRPPSCRRRLMELEFVEIV+R+EIEPYL SSFDHED
Sbjct: 61  CRTPTSAENKIPAVEQCPPAPRKRKRPPSCRRRLMELEFVEIVHRDEIEPYLNSSFDHED 120

Query: 121 RVRKSAKRSFCECK 126
           RVRKSAKRSFCECK
Sbjct: 121 RVRKSAKRSFCECK 134

[Close]

BLAST of CcUC05G103670.1 vs. ExPASy Swiss-Prot
Match: Q9LPP4 (Cyclin-dependent protein kinase inhibitor SMR1 OS=Arabidopsis thaliana OX=3702 GN=SMR1 PE=1 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 1.8e-07
Identity = 35/92 (38.04%), Postives = 50/92 (54.35%), Query Frame = 0


Query: 46  DDEVLCCRTPTSAENKIPAVVQCPPAPRKRKRPP-------------SCRRRLMELEFVE 105
           D++ L C TPTS E+KIPAVV  PP P ++ RPP             SC+R+L+      
Sbjct: 35  DEDDLRCSTPTSQEHKIPAVVDSPPPPPRKPRPPPSAPSATAALMIRSCKRKLLVSTCEI 94

Query: 106 IVNREEIEPYLRSSFDHEDRVRKSAKRSFCEC 125
           I+NREEI+ +  S ++      K  +RS+  C
Sbjct: 95  IMNREEIDRFFSSVYNETSTTAK-RRRSYPYC 125

[Close]

BLAST of CcUC05G103670.1 vs. ExPASy Swiss-Prot
Match: Q29Q81 (Cyclin-dependent protein kinase inhibitor SMR6 OS=Arabidopsis thaliana OX=3702 GN=SMR6 PE=1 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 8.2e-05
Identity = 20/47 (42.55%), Postives = 32/47 (68.09%), Query Frame = 0


Query: 40 IQKDRIDDEVLCCRTPTSAENKIPAVVQCPPAPRKRKRPPSCRRRLM 87
          +++D  ++E  C  TPT+ E KIP +++CPPAPRKR+    CR  ++
Sbjct: 48 VEEDCYNEEEECSTTPTAKETKIPELLECPPAPRKRRPALKCRSNVV 94

[Close]

BLAST of CcUC05G103670.1 vs. ExPASy TrEMBL
Match: A0A5D3CD68 (Cyclin-dependent protein kinase inhibitor SMR1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G002260 PE=4 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 6.5e-53
Identity = 112/133 (84.21%), Postives = 117/133 (87.97%), Query Frame = 0


Query: 1   MSTDLDLRRTLLEIVRRPAINLQIPRPSTS--MSGDHGGVIIQKDRIDD------EVLCC 60
           MST+LDLRRTLLEIVRRP I LQIP PST+  M GD GGVIIQKDRID       E LCC
Sbjct: 1   MSTELDLRRTLLEIVRRPPIKLQIPLPSTAVVMGGDRGGVIIQKDRIDKGEDGGAEELCC 60

Query: 61  RTPTSAENKIPAVVQCPPAPRKRKRPPSCRRRLMELEFVEIVNREEIEPYLRSSFDHEDR 120
           RTPTSAENKIPAVVQCPPAPRKRKRPPSCRRRLMELEFVEIV+R+EIEPYL +SFDHEDR
Sbjct: 61  RTPTSAENKIPAVVQCPPAPRKRKRPPSCRRRLMELEFVEIVHRDEIEPYLNASFDHEDR 120

Query: 121 VRKSAKRSFCECK 126
           VRKSAKRSFCECK
Sbjct: 121 VRKSAKRSFCECK 133

[Close]

BLAST of CcUC05G103670.1 vs. ExPASy TrEMBL
Match: A0A1S3BFF9 (cyclin-dependent protein kinase inhibitor SMR1-like OS=Cucumis melo OX=3656 GN=LOC103489420 PE=4 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 6.5e-53
Identity = 112/133 (84.21%), Postives = 117/133 (87.97%), Query Frame = 0


Query: 1   MSTDLDLRRTLLEIVRRPAINLQIPRPSTS--MSGDHGGVIIQKDRIDD------EVLCC 60
           MST+LDLRRTLLEIVRRP I LQIP PST+  M GD GGVIIQKDRID       E LCC
Sbjct: 1   MSTELDLRRTLLEIVRRPPIKLQIPLPSTAVVMGGDRGGVIIQKDRIDKGEDGGAEELCC 60

Query: 61  RTPTSAENKIPAVVQCPPAPRKRKRPPSCRRRLMELEFVEIVNREEIEPYLRSSFDHEDR 120
           RTPTSAENKIPAVVQCPPAPRKRKRPPSCRRRLMELEFVEIV+R+EIEPYL +SFDHEDR
Sbjct: 61  RTPTSAENKIPAVVQCPPAPRKRKRPPSCRRRLMELEFVEIVHRDEIEPYLNASFDHEDR 120

Query: 121 VRKSAKRSFCECK 126
           VRKSAKRSFCECK
Sbjct: 121 VRKSAKRSFCECK 133

[Close]

BLAST of CcUC05G103670.1 vs. ExPASy TrEMBL
Match: A0A6J1JRA3 (cyclin-dependent protein kinase inhibitor SMR1-like OS=Cucurbita maxima OX=3661 GN=LOC111489107 PE=4 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 8.4e-53
Identity = 107/130 (82.31%), Postives = 117/130 (90.00%), Query Frame = 0


Query: 1   MSTDLDLRRTLLEIVRRPAINLQIPRPSTSMSGDHGGVIIQKDRID-----DEVLCCRTP 60
           MSTDLDLRRTLLE+VRRPAI LQIPRP +SM+ DHGGVIIQK+RID     DE LCCRTP
Sbjct: 1   MSTDLDLRRTLLEVVRRPAIKLQIPRPLSSMAADHGGVIIQKERIDNIDGGDEELCCRTP 60

Query: 61  TSAENKIPAVVQCPPAPRKRKRPPSCRRRLMELEFVEIVNREEIEPYLRSSFDHEDRVRK 120
           TSAENKIP V+QCPPAPRKRKRPP+CRRRL+ELEFVEIV+REEIEPY  SSFDHE+RV+K
Sbjct: 61  TSAENKIPVVLQCPPAPRKRKRPPTCRRRLIELEFVEIVSREEIEPYFTSSFDHENRVKK 120

Query: 121 SAKRSFCECK 126
           SAK SFCECK
Sbjct: 121 SAKISFCECK 130

[Close]

BLAST of CcUC05G103670.1 vs. ExPASy TrEMBL
Match: A0A0A0KRI0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G621910 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 3.2e-52
Identity = 111/134 (82.84%), Postives = 117/134 (87.31%), Query Frame = 0


Query: 1   MSTDLDLRRTLLEIVRRPAINLQIPRPSTSMS----GDHGGVIIQKDRIDD-----EVLC 60
           MST+LDLRRTLLEIVRRP I LQIP P+TS S    GDHGGVIIQKDR+D+     E L 
Sbjct: 1   MSTELDLRRTLLEIVRRPPIKLQIPPPTTSTSVMAGGDHGGVIIQKDRVDEEDGGAEELS 60

Query: 61  CRTPTSAENKIPAVVQCPPAPRKRKRPPSCRRRLMELEFVEIVNREEIEPYLRSSFDHED 120
           CRTPTSAENKIPAV QCPPAPRKRKRPPSCRRRLMELEFVEIV+R+EIEPYL SSFDHED
Sbjct: 61  CRTPTSAENKIPAVEQCPPAPRKRKRPPSCRRRLMELEFVEIVHRDEIEPYLNSSFDHED 120

Query: 121 RVRKSAKRSFCECK 126
           RVRKSAKRSFCECK
Sbjct: 121 RVRKSAKRSFCECK 134

[Close]

BLAST of CcUC05G103670.1 vs. ExPASy TrEMBL
Match: A0A6J1GZ63 (cyclin-dependent protein kinase inhibitor SMR1-like OS=Cucurbita moschata OX=3662 GN=LOC111458554 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 3.2e-52
Identity = 106/130 (81.54%), Postives = 117/130 (90.00%), Query Frame = 0


Query: 1   MSTDLDLRRTLLEIVRRPAINLQIPRPSTSMSGDHGGVIIQKDRIDD-----EVLCCRTP 60
           MSTDLDLRRTLLE+VRRPAI LQIPRP +SM+ DHGGVIIQK+RID+     E LCCRTP
Sbjct: 1   MSTDLDLRRTLLEVVRRPAIKLQIPRPLSSMAADHGGVIIQKERIDNIDGGAEELCCRTP 60

Query: 61  TSAENKIPAVVQCPPAPRKRKRPPSCRRRLMELEFVEIVNREEIEPYLRSSFDHEDRVRK 120
           TSAENKIP V+QCPPAPRKRKRPP+CRRRL+ELEFVEIV+REEIEPY  SSFDHE+RV+K
Sbjct: 61  TSAENKIPVVLQCPPAPRKRKRPPTCRRRLIELEFVEIVSREEIEPYFTSSFDHENRVKK 120

Query: 121 SAKRSFCECK 126
           SAK SFCECK
Sbjct: 121 SAKISFCECK 130

[Close]

BLAST of CcUC05G103670.1 vs. TAIR 10
Match: AT3G10525.1 (LOSS OF GIANT CELLS FROM ORGANS )

HSP 1 Score: 57.0 bits (136), Expect = 1.3e-08
Identity = 35/92 (38.04%), Postives = 50/92 (54.35%), Query Frame = 0


Query: 46  DDEVLCCRTPTSAENKIPAVVQCPPAPRKRKRPP-------------SCRRRLMELEFVE 105
           D++ L C TPTS E+KIPAVV  PP P ++ RPP             SC+R+L+      
Sbjct: 35  DEDDLRCSTPTSQEHKIPAVVDSPPPPPRKPRPPPSAPSATAALMIRSCKRKLLVSTCEI 94

Query: 106 IVNREEIEPYLRSSFDHEDRVRKSAKRSFCEC 125
           I+NREEI+ +  S ++      K  +RS+  C
Sbjct: 95  IMNREEIDRFFSSVYNETSTTAK-RRRSYPYC 125

[Close]

BLAST of CcUC05G103670.1 vs. TAIR 10
Match: AT5G40460.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27630.1); Has 87 Blast hits to 87 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 48.1 bits (113), Expect = 5.9e-06
Identity = 20/47 (42.55%), Postives = 32/47 (68.09%), Query Frame = 0


Query: 40 IQKDRIDDEVLCCRTPTSAENKIPAVVQCPPAPRKRKRPPSCRRRLM 87
          +++D  ++E  C  TPT+ E KIP +++CPPAPRKR+    CR  ++
Sbjct: 48 VEEDCYNEEEECSTTPTAKETKIPELLECPPAPRKRRPALKCRSNVV 94

[Close]

BLAST of CcUC05G103670.1 vs. TAIR 10
Match: AT1G60783.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G10690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 42.4 bits (98), Expect = 3.2e-04
Identity = 18/31 (58.06%), Postives = 23/31 (74.19%), Query Frame = 0


Query: 46 DDEVLCCRTPTSAENKIPAVVQCPPAPRKRK 77
          +DE LC  TPT+   +IP V+ CPPAP+KRK
Sbjct: 49 EDEDLCPTTPTADSVRIPTVIPCPPAPKKRK 79

[Close]

BLAST of CcUC05G103670.1 vs. TAIR 10
Match: AT5G02420.1 (unknown protein; Has 90 Blast hits to 90 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 41.2 bits (95), Expect = 7.2e-04
Identity = 32/78 (41.03%), Postives = 44/78 (56.41%), Query Frame = 0


Query: 52  CRTPTSAENKIPAV--VQCPPAPRKRK--RPPSCRRRLMELEFVEIVNR------EEIEP 111
           C+TPTS+++KIP V    CPPAPRK K  R    +R+L     V +VNR       EIE 
Sbjct: 44  CKTPTSSDHKIPEVKYTLCPPAPRKPKPNRSSGTKRKLTP---VNVVNRIPIDLSREIEM 103

Query: 112 YLRSSFDHEDRVRKSAKR 120
           +     D + R++KS K+
Sbjct: 104 FFE---DLDRRIKKSRKQ 115

The following BLAST results are available for this feature:

BLAST of CcUC05G103670.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038893025.1	2.8e-58	93.70	cyclin-dependent protein kinase inhibitor SMR1-like [Benincasa hispida]	[more]
XP_008446800.1	1.3e-52	84.21	PREDICTED: cyclin-dependent protein kinase inhibitor SMR1-like [Cucumis melo] >K...	[more]
XP_022992922.1	1.7e-52	82.31	cyclin-dependent protein kinase inhibitor SMR1-like [Cucurbita maxima]	[more]
XP_022957068.1	6.6e-52	81.54	cyclin-dependent protein kinase inhibitor SMR1-like [Cucurbita moschata] >KAG660...	[more]
XP_011655851.1	6.6e-52	82.84	cyclin-dependent protein kinase inhibitor SMR1 [Cucumis sativus] >KGN52223.1 hyp...	[more]

BLAST of CcUC05G103670.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LPP4	1.8e-07	38.04	Cyclin-dependent protein kinase inhibitor SMR1 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q29Q81	8.2e-05	42.55	Cyclin-dependent protein kinase inhibitor SMR6 OS=Arabidopsis thaliana OX=3702 G...	[more]

BLAST of CcUC05G103670.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CD68	6.5e-53	84.21	Cyclin-dependent protein kinase inhibitor SMR1-like OS=Cucumis melo var. makuwa ...	[more]
A0A1S3BFF9	6.5e-53	84.21	cyclin-dependent protein kinase inhibitor SMR1-like OS=Cucumis melo OX=3656 GN=L...	[more]
A0A6J1JRA3	8.4e-53	82.31	cyclin-dependent protein kinase inhibitor SMR1-like OS=Cucurbita maxima OX=3661 ...	[more]
A0A0A0KRI0	3.2e-52	82.84	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G621910 PE=4 SV=1	[more]
A0A6J1GZ63	3.2e-52	81.54	cyclin-dependent protein kinase inhibitor SMR1-like OS=Cucurbita moschata OX=366...	[more]

BLAST of CcUC05G103670.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G10525.1	1.3e-08	38.04	LOSS OF GIANT CELLS FROM ORGANS	[more]
AT5G40460.1	5.9e-06	42.55	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G60783.1	3.2e-04	58.06	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G02420.1	7.2e-04	41.03	unknown protein; Has 90 Blast hits to 90 proteins in 10 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR040389	Cyclin-dependent protein kinase inhibitor SMR	PANTHER	PTHR33142	CYCLIN-DEPENDENT PROTEIN KINASE INHIBITOR SMR13	coord: 26..120
None	No IPR available	PANTHER	PTHR33142:SF57	CYCLIN-DEPENDENT PROTEIN KINASE INHIBITOR SMR1-LIKE	coord: 26..120

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CcUC05G103670	CcUC05G103670	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC05G103670.1-exon	CcUC05G103670.1-exon-CicolChr05:31374162..31374539	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC05G103670.1-cds	CcUC05G103670.1-cds-CicolChr05:31374162..31374539	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CcUC05G103670.1	CcUC05G103670.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032875	regulation of DNA endoreduplication
biological_process	GO:0045839	negative regulation of mitotic nuclear division
cellular_component	GO:0005634	nucleus