CcUC05G088540.1 (mRNA) Watermelon (PI 537277) v1

Overview
NameCcUC05G088540.1
TypemRNA
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
LocationCicolChr05: 6125484 .. 6125799 (+)
Sequence length216
RNA-Seq ExpressionCcUC05G088540.1
SyntenyCcUC05G088540.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTAGTTCAAAATCTTTAATAAAGAAAAGTAGGTAACAATATTTCTTTTTGGAACTTGGGTTTTGTTTTAGTTTTAATCAGATAGATTTATTTTTGAATATTTGTTATGTGTTCAAAGTGTTAATGATGGAGGTTTCTCATGGGTCAAGTCAATGTGAAAGTAAAGTTTTTAGATGGGTCTGATAAAAGTGATGGAGTGAAACAGTCATTTGAGGAGAGTGGGGTATTTCCTTGGCCACTTGATGATGAAACTCAAAATGGCATCATTCATGATTTTATTTTATTTTATTTATTTATTTTGATATATTCATAA

mRNA sequence

ATGATTAGTTCAAAATCTTTAATAAAGAAAAGTAGGTTTCTCATGGGTCAAGTCAATGTGAAAGTAAAGTTTTTAGATGGGTCTGATAAAAGTGATGGAGTGAAACAGTCATTTGAGGAGAGTGGGGTATTTCCTTGGCCACTTGATGATGAAACTCAAAATGGCATCATTCATGATTTTATTTTATTTTATTTATTTATTTTGATATATTCATAA

Coding sequence (CDS)

ATGATTAGTTCAAAATCTTTAATAAAGAAAAGTAGGTTTCTCATGGGTCAAGTCAATGTGAAAGTAAAGTTTTTAGATGGGTCTGATAAAAGTGATGGAGTGAAACAGTCATTTGAGGAGAGTGGGGTATTTCCTTGGCCACTTGATGATGAAACTCAAAATGGCATCATTCATGATTTTATTTTATTTTATTTATTTATTTTGATATATTCATAA

Protein sequence

MISSKSLIKKSRFLMGQVNVKVKFLDGSDKSDGVKQSFEESGVFPWPLDDETQNGIIHDFILFYLFILIYS
Homology
The following BLAST results are available for this feature:
BLAST of CcUC05G088540.1 vs.
Match NameE-valueIdentityDescription
BLAST of CcUC05G088540.1 vs.
Match NameE-valueIdentityDescription
BLAST of CcUC05G088540.1 vs.
Match NameE-valueIdentityDescription
BLAST of CcUC05G088540.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CcUC05G088540CcUC05G088540gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CcUC05G088540.1-exonCcUC05G088540.1-exon-CicolChr05:6125484..6125518exon
CcUC05G088540.1-exonCcUC05G088540.1-exon-CicolChr05:6125619..6125799exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CcUC05G088540.1-cdsCcUC05G088540.1-cds-CicolChr05:6125484..6125518CDS
CcUC05G088540.1-cdsCcUC05G088540.1-cds-CicolChr05:6125619..6125799CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CcUC05G088540.1CcUC05G088540.1-proteinpolypeptide