CcUC04G078200.1 (mRNA) Watermelon (PI 537277) v1

Overview


Name	CcUC04G078200.1
Type	mRNA
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Ethylene-responsive transcription factor, putative
Location	CicolChr04: 32787522 .. 32788034 (+)
Sequence length	513
RNA-Seq Expression	CcUC04G078200.1
Synteny	CcUC04G078200.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTTTAGCCTCCCACTCCCATTCCGATTTGCCTTTTAATGAGAATGATTCTCAAGATATGGTCATTTACGAAGTTTTAAACGGCCCCATGTCTTCCCACTCTACCCTTCCCCCCGCCGCTGACCAACCCAACGCCGACCGCCGCCTCAATCCCCCTGCGAGAACCATCGCCAAGAAGCACTACAGAGGGGTCCGCCAACGCCCCTGGGGCAAATACGCCGCCGAGATACGTGACTCCACCCGACACGGCGCCCGCGTCTGGCTTGGCACCTTCGCCACCGCCGAGGAGGCTGCTTTGGCTTATGATACCGCCGCTTTCAATATGAGAGGCCCTAAAGCGCTTCTCAATTTCCCTCCGGAGGTGGTGGCCGCAGCGGCGGCGGCGGCGGCGAAGACGACGACTTTCCCACCGTCGAAGAGGAAGCTTAACGCTGAGCCGAGTGGTAGTAGCTCTAGCACCATTTCAATAGCGACTTCAAGATCAGAATCAGATAGCAGCGCTGCTGAATAG

mRNA sequence

ATGGTTTTAGCCTCCCACTCCCATTCCGATTTGCCTTTTAATGAGAATGATTCTCAAGATATGGTCATTTACGAAGTTTTAAACGGCCCCATGTCTTCCCACTCTACCCTTCCCCCCGCCGCTGACCAACCCAACGCCGACCGCCGCCTCAATCCCCCTGCGAGAACCATCGCCAAGAAGCACTACAGAGGGGTCCGCCAACGCCCCTGGGGCAAATACGCCGCCGAGATACGTGACTCCACCCGACACGGCGCCCGCGTCTGGCTTGGCACCTTCGCCACCGCCGAGGAGGCTGCTTTGGCTTATGATACCGCCGCTTTCAATATGAGAGGCCCTAAAGCGCTTCTCAATTTCCCTCCGGAGGTGGTGGCCGCAGCGGCGGCGGCGGCGGCGAAGACGACGACTTTCCCACCGTCGAAGAGGAAGCTTAACGCTGAGCCGAGTGGTAGTAGCTCTAGCACCATTTCAATAGCGACTTCAAGATCAGAATCAGATAGCAGCGCTGCTGAATAG

Coding sequence (CDS)

ATGGTTTTAGCCTCCCACTCCCATTCCGATTTGCCTTTTAATGAGAATGATTCTCAAGATATGGTCATTTACGAAGTTTTAAACGGCCCCATGTCTTCCCACTCTACCCTTCCCCCCGCCGCTGACCAACCCAACGCCGACCGCCGCCTCAATCCCCCTGCGAGAACCATCGCCAAGAAGCACTACAGAGGGGTCCGCCAACGCCCCTGGGGCAAATACGCCGCCGAGATACGTGACTCCACCCGACACGGCGCCCGCGTCTGGCTTGGCACCTTCGCCACCGCCGAGGAGGCTGCTTTGGCTTATGATACCGCCGCTTTCAATATGAGAGGCCCTAAAGCGCTTCTCAATTTCCCTCCGGAGGTGGTGGCCGCAGCGGCGGCGGCGGCGGCGAAGACGACGACTTTCCCACCGTCGAAGAGGAAGCTTAACGCTGAGCCGAGTGGTAGTAGCTCTAGCACCATTTCAATAGCGACTTCAAGATCAGAATCAGATAGCAGCGCTGCTGAATAG

Protein sequence

MVLASHSHSDLPFNENDSQDMVIYEVLNGPMSSHSTLPPAADQPNADRRLNPPARTIAKKHYRGVRQRPWGKYAAEIRDSTRHGARVWLGTFATAEEAALAYDTAAFNMRGPKALLNFPPEVVAAAAAAAAKTTTFPPSKRKLNAEPSGSSSSTISIATSRSESDSSAAE

Homology

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BLAST of CcUC04G078200.1 vs. NCBI nr
Match: KAA0052648.1 (pathogenesis-related genes transcriptional activator PTI5-like [Cucumis melo var. makuwa] >TYK13178.1 pathogenesis-related genes transcriptional activator PTI5-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 279.3 bits (713), Expect = 2.3e-71
Identity = 153/173 (88.44%), Postives = 158/173 (91.33%), Query Frame = 0


Query: 1   MVLASHS-HSDLPFNENDSQDMVIYEVLNGPMSSHSTLPPAADQPNAD--RRLNPPARTI 60
           MVL SH+  +DLPFNENDSQDMVIY+VLN PMSSHSTLPPA DQPNA+  RRLNPPARTI
Sbjct: 1   MVLGSHTPQADLPFNENDSQDMVIYQVLNSPMSSHSTLPPADDQPNANSSRRLNPPARTI 60

Query: 61  AKKHYRGVRQRPWGKYAAEIRDSTRHGARVWLGTFATAEEAALAYDTAAFNMRGPKALLN 120
           AKKHYRGVRQRPWGKYAAEIRDSTRHGARVWLGTFATAEEAALAYDTAAF MRGPKALLN
Sbjct: 61  AKKHYRGVRQRPWGKYAAEIRDSTRHGARVWLGTFATAEEAALAYDTAAFRMRGPKALLN 120

Query: 121 FPPEVVAAAAAAAAKTTTFPPSKRKLNAEPSGSSSSTISIATSRSESDSSAAE 171
           FPPEVVAAAAAAA  TTT PPSKRK NAEP GSSSSTIS+ATSRSESD SA E
Sbjct: 121 FPPEVVAAAAAAAKTTTTSPPSKRKPNAEPWGSSSSTISLATSRSESDCSAPE 173

[Close]

BLAST of CcUC04G078200.1 vs. NCBI nr
Match: XP_038881227.1 (pathogenesis-related genes transcriptional activator PTI5-like [Benincasa hispida])

HSP 1 Score: 273.5 bits (698), Expect = 1.3e-69
Identity = 153/175 (87.43%), Postives = 156/175 (89.14%), Query Frame = 0


Query: 1   MVLASHSHSDLPFNENDSQDMVIYEVLNGPMSSHSTLP-PAADQP----NADRRLNPPAR 60
           MVLASH+ SDLPFNENDSQDMVIY+VLN  MSS STLP  AADQP    NA RRLN P R
Sbjct: 1   MVLASHTQSDLPFNENDSQDMVIYQVLNASMSSDSTLPAAAADQPNSNANAPRRLNSPVR 60

Query: 61  TIAKKHYRGVRQRPWGKYAAEIRDSTRHGARVWLGTFATAEEAALAYDTAAFNMRGPKAL 120
           TIAKKHYRGVRQRPWGKYAAEIRDSTRHGARVWLGTFATAEEAALAYDTAAFNMRG KAL
Sbjct: 61  TIAKKHYRGVRQRPWGKYAAEIRDSTRHGARVWLGTFATAEEAALAYDTAAFNMRGSKAL 120

Query: 121 LNFPPEVVAAAAAAAAKTTTFPPSKRKLNAEPSGSSSSTISIATSRSESDSSAAE 171
           LNFPPEVVAAAAAAAA T  FPPSKRKLNAEPSGSSSS IS+ATSRSESDSSA E
Sbjct: 121 LNFPPEVVAAAAAAAATTRNFPPSKRKLNAEPSGSSSSNISMATSRSESDSSAPE 175

[Close]

BLAST of CcUC04G078200.1 vs. NCBI nr
Match: XP_008439787.1 (PREDICTED: pathogenesis-related genes transcriptional activator PTI5-like [Cucumis melo])

HSP 1 Score: 271.2 bits (692), Expect = 6.2e-69
Identity = 151/173 (87.28%), Postives = 156/173 (90.17%), Query Frame = 0


Query: 1   MVLASHS-HSDLPFNENDSQDMVIYEVLNGPMSSHSTLPPAADQPNAD--RRLNPPARTI 60
           MVL SH+  + LPFNENDSQDMVIY+VLN PMSSHSTLPPA DQPNA+  RRLNPPARTI
Sbjct: 1   MVLGSHTPQAGLPFNENDSQDMVIYQVLNSPMSSHSTLPPADDQPNANSSRRLNPPARTI 60

Query: 61  AKKHYRGVRQRPWGKYAAEIRDSTRHGARVWLGTFATAEEAALAYDTAAFNMRGPKALLN 120
           AKKHYRGVRQRPWGKYAAEIRDSTRHGARVWLGTFATAEEAALAYDTAAF MRGPKALLN
Sbjct: 61  AKKHYRGVRQRPWGKYAAEIRDSTRHGARVWLGTFATAEEAALAYDTAAFRMRGPKALLN 120

Query: 121 FPPEVVAAAAAAAAKTTTFPPSKRKLNAEPSGSSSSTISIATSRSESDSSAAE 171
           FPPEVVAAAAAA   TTT PPSKRK NAEP GSSSSTIS+ATSRSESD SA E
Sbjct: 121 FPPEVVAAAAAAKT-TTTSPPSKRKPNAEPWGSSSSTISLATSRSESDCSAPE 172

[Close]

BLAST of CcUC04G078200.1 vs. NCBI nr
Match: KAE8647706.1 (hypothetical protein Csa_003722 [Cucumis sativus])

HSP 1 Score: 261.9 bits (668), Expect = 3.8e-66
Identity = 145/178 (81.46%), Postives = 152/178 (85.39%), Query Frame = 0


Query: 1   MVLASHSHSDLPFNENDSQDMVIYEVLNGPMSSHSTLPPAADQPNAD--------RRLNP 60
           MVL S++ SDLPFNENDS+DMVIY+VLN PMSSHSTLP A DQPNA+         RLNP
Sbjct: 20  MVLGSNAQSDLPFNENDSEDMVIYQVLNSPMSSHSTLPAADDQPNANANANANASHRLNP 79

Query: 61  PARTIAKKHYRGVRQRPWGKYAAEIRDSTRHGARVWLGTFATAEEAALAYDTAAFNMRGP 120
           PARTIAKKHYRGVRQRPWGKYAAEIRDSTRHGARVWLGTFATAEEAALAYDTAAF MRG 
Sbjct: 80  PARTIAKKHYRGVRQRPWGKYAAEIRDSTRHGARVWLGTFATAEEAALAYDTAAFTMRGS 139

Query: 121 KALLNFPPEVVAAAAAAAAKTTTFPPSKRKLNAEPSGSSSSTISIATSRSESDSSAAE 171
           KALLNFPPEVVAAAAAA   TTT PPSKRK N EP GSSSSTIS+ATSR+ESD  A E
Sbjct: 140 KALLNFPPEVVAAAAAAKT-TTTSPPSKRKPNVEPCGSSSSTISLATSRTESDCKAPE 196

[Close]

BLAST of CcUC04G078200.1 vs. NCBI nr
Match: XP_004134941.2 (pathogenesis-related genes transcriptional activator PTI5 [Cucumis sativus])

HSP 1 Score: 261.9 bits (668), Expect = 3.8e-66
Identity = 145/178 (81.46%), Postives = 152/178 (85.39%), Query Frame = 0


Query: 1   MVLASHSHSDLPFNENDSQDMVIYEVLNGPMSSHSTLPPAADQPNAD--------RRLNP 60
           MVL S++ SDLPFNENDS+DMVIY+VLN PMSSHSTLP A DQPNA+         RLNP
Sbjct: 1   MVLGSNAQSDLPFNENDSEDMVIYQVLNSPMSSHSTLPAADDQPNANANANANASHRLNP 60

Query: 61  PARTIAKKHYRGVRQRPWGKYAAEIRDSTRHGARVWLGTFATAEEAALAYDTAAFNMRGP 120
           PARTIAKKHYRGVRQRPWGKYAAEIRDSTRHGARVWLGTFATAEEAALAYDTAAF MRG 
Sbjct: 61  PARTIAKKHYRGVRQRPWGKYAAEIRDSTRHGARVWLGTFATAEEAALAYDTAAFTMRGS 120

Query: 121 KALLNFPPEVVAAAAAAAAKTTTFPPSKRKLNAEPSGSSSSTISIATSRSESDSSAAE 171
           KALLNFPPEVVAAAAAA   TTT PPSKRK N EP GSSSSTIS+ATSR+ESD  A E
Sbjct: 121 KALLNFPPEVVAAAAAAKT-TTTSPPSKRKPNVEPCGSSSSTISLATSRTESDCKAPE 177

[Close]

BLAST of CcUC04G078200.1 vs. ExPASy Swiss-Prot
Match: O04681 (Pathogenesis-related genes transcriptional activator PTI5 OS=Solanum lycopersicum OX=4081 GN=PTI5 PE=2 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 9.7e-33
Identity = 85/149 (57.05%), Postives = 99/149 (66.44%), Query Frame = 0


Query: 9   SDLPFNENDSQDMVIYEVLNGPMSSHSTLPPAADQPNADRRLNPPARTIAKKHYRGVRQR 68
           SDLP NENDSQ+MV+YEVLN   + +    P  +Q      +  P + I KK YRGVR+R
Sbjct: 7   SDLPLNENDSQEMVLYEVLNEANALNIPYLPQRNQLLPRNNILRPLQCIGKK-YRGVRRR 66

Query: 69  PWGKYAAEIRDSTRHGARVWLGTFATAEEAALAYDTAAFNMRGPKALLNFPPEVVAAAAA 128
           PWGKYAAEIRDS RHGARVWLGTF TAEEAALAYD AAF MRG KALLNFP E+V A+ +
Sbjct: 67  PWGKYAAEIRDSARHGARVWLGTFETAEEAALAYDRAAFRMRGAKALLNFPSEIVNASVS 126

Query: 129 ------AAAKTTTFPPSKRKLNAEPSGSS 152
                  +   TT   S   LN   SG++
Sbjct: 127 VDKLSLCSNSYTTNNNSDSSLNEVSSGTN 154

[Close]

BLAST of CcUC04G078200.1 vs. ExPASy Swiss-Prot
Match: A0A3Q7I5Y9 (Ethylene-response factor C3 OS=Solanum lycopersicum OX=4081 GN=ERF.C.3 PE=2 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 3.6e-27
Identity = 64/116 (55.17%), Postives = 81/116 (69.83%), Query Frame = 0


Query: 8   HSDLPFNENDSQDMVIYEVLNGPMSSHSTLPPAADQPNADRRLNPPARTIAKKHYRGVRQ 67
           ++ LPFN ND+QDM++Y ++    SS  T+  ++     +  +         K+YRGVR+
Sbjct: 13  YNSLPFNVNDTQDMLLYNLV-AEGSSQETVNSSSSYGIKEEEVTSYEEERKDKNYRGVRK 72

Query: 68  RPWGKYAAEIRDSTRHGARVWLGTFATAEEAALAYDTAAFNMRGPKALLNFPPEVV 124
           RPWGKYAAEIRDSTR+G RVWLGTF  AEEAALAYD AAF MRG  A+LNFP E+V
Sbjct: 73  RPWGKYAAEIRDSTRNGVRVWLGTFDNAEEAALAYDQAAFAMRGSMAILNFPVEIV 127

[Close]

BLAST of CcUC04G078200.1 vs. ExPASy Swiss-Prot
Match: O80337 (Ethylene-responsive transcription factor 1A OS=Arabidopsis thaliana OX=3702 GN=ERF1A PE=1 SV=2)

HSP 1 Score: 122.5 bits (306), Expect = 4.7e-27
Identity = 71/146 (48.63%), Postives = 86/146 (58.90%), Query Frame = 0


Query: 5   SHSHSDLPFNENDSQDMVIYEVLNGPMSSHSTLPPAADQPNADRRLNPPAR--------- 64
           + S  DLP  ENDS+DM++Y +LN   + H    P++   + DR   P  +         
Sbjct: 65  TESWGDLPLKENDSEDMLVYGILND--AFHGGWEPSSSSSDEDRSSFPSVKIETPESFAA 124

Query: 65  ------------------TIAK-KHYRGVRQRPWGKYAAEIRDSTRHGARVWLGTFATAE 123
                             T AK KHYRGVRQRPWGK+AAEIRD  ++GARVWLGTF TAE
Sbjct: 125 VDSVPVKKEKTSPVSAAVTAAKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAE 184

[Close]

BLAST of CcUC04G078200.1 vs. ExPASy Swiss-Prot
Match: Q8LDC8 (Ethylene-responsive transcription factor 1B OS=Arabidopsis thaliana OX=3702 GN=ERF1B PE=1 SV=2)

HSP 1 Score: 120.9 bits (302), Expect = 1.4e-26
Identity = 64/120 (53.33%), Postives = 83/120 (69.17%), Query Frame = 0


Query: 4   ASHSHSDLPFNENDSQDMVIYEVLNGPMSSHSTLPPAADQPNADRRLNPPARTIAKKHYR 63
           +S ++  LPFNENDS++M +Y ++       ST     D  + D  +   +   ++K YR
Sbjct: 29  SSSNNYSLPFNENDSEEMFLYGLI-----EQSTQQTYIDSDSQDLPIKSVSSRKSEKSYR 88

Query: 64  GVRQRPWGKYAAEIRDSTRHGARVWLGTFATAEEAALAYDTAAFNMRGPKALLNFPPEVV 123
           GVR+RPWGK+AAEIRDSTR+G RVWLGTF +AEEAALAYD AAF+MRG  A+LNF  E V
Sbjct: 89  GVRRRPWGKFAAEIRDSTRNGIRVWLGTFESAEEAALAYDQAAFSMRGSSAILNFSAERV 143

[Close]

BLAST of CcUC04G078200.1 vs. ExPASy Swiss-Prot
Match: O80338 (Ethylene-responsive transcription factor 2 OS=Arabidopsis thaliana OX=3702 GN=ERF2 PE=2 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.5e-25
Identity = 79/178 (44.38%), Postives = 101/178 (56.74%), Query Frame = 0


Query: 5   SHSHSDLPFNENDSQDMVIYEVLNGPM---SSHSTLPPAADQP--------------NAD 64
           + S   LP  ENDS+DM++Y +L       +S S L    D P                 
Sbjct: 42  TESWGGLPLKENDSEDMLVYGLLKDAFHFDTSSSDLSCLFDFPAVKVEPTENFTAMEEKP 101

Query: 65  RRLNPPARTIAK-KHYRGVRQRPWGKYAAEIRDSTRHGARVWLGTFATAEEAALAYDTAA 124
           ++  P   T  K KHYRGVRQRPWGK+AAEIRD  ++GARVWLGTF TAE+AALAYD AA
Sbjct: 102 KKAIPVTETAVKAKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDIAA 161

Query: 125 FNMRGPKALLNFPPEVVAAAAAAAAKTTTFPPSKRKLNAEPSGSSSSTISIATSRSES 165
           F MRG +ALLNFP            +  +  P   ++ ++ S SSSS+ S +TS SE+
Sbjct: 162 FRMRGSRALLNFP-----------LRVNSGEPDPVRITSKRSSSSSSSSSSSTSSSEN 208

[Close]

BLAST of CcUC04G078200.1 vs. ExPASy TrEMBL
Match: A0A5D3CPS3 (Pathogenesis-related genes transcriptional activator PTI5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007900 PE=4 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 1.1e-71
Identity = 153/173 (88.44%), Postives = 158/173 (91.33%), Query Frame = 0


Query: 1   MVLASHS-HSDLPFNENDSQDMVIYEVLNGPMSSHSTLPPAADQPNAD--RRLNPPARTI 60
           MVL SH+  +DLPFNENDSQDMVIY+VLN PMSSHSTLPPA DQPNA+  RRLNPPARTI
Sbjct: 1   MVLGSHTPQADLPFNENDSQDMVIYQVLNSPMSSHSTLPPADDQPNANSSRRLNPPARTI 60

Query: 61  AKKHYRGVRQRPWGKYAAEIRDSTRHGARVWLGTFATAEEAALAYDTAAFNMRGPKALLN 120
           AKKHYRGVRQRPWGKYAAEIRDSTRHGARVWLGTFATAEEAALAYDTAAF MRGPKALLN
Sbjct: 61  AKKHYRGVRQRPWGKYAAEIRDSTRHGARVWLGTFATAEEAALAYDTAAFRMRGPKALLN 120

Query: 121 FPPEVVAAAAAAAAKTTTFPPSKRKLNAEPSGSSSSTISIATSRSESDSSAAE 171
           FPPEVVAAAAAAA  TTT PPSKRK NAEP GSSSSTIS+ATSRSESD SA E
Sbjct: 121 FPPEVVAAAAAAAKTTTTSPPSKRKPNAEPWGSSSSTISLATSRSESDCSAPE 173

[Close]

BLAST of CcUC04G078200.1 vs. ExPASy TrEMBL
Match: A0A1S3AZ58 (pathogenesis-related genes transcriptional activator PTI5-like OS=Cucumis melo OX=3656 GN=LOC103484478 PE=4 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 3.0e-69
Identity = 151/173 (87.28%), Postives = 156/173 (90.17%), Query Frame = 0


Query: 1   MVLASHS-HSDLPFNENDSQDMVIYEVLNGPMSSHSTLPPAADQPNAD--RRLNPPARTI 60
           MVL SH+  + LPFNENDSQDMVIY+VLN PMSSHSTLPPA DQPNA+  RRLNPPARTI
Sbjct: 1   MVLGSHTPQAGLPFNENDSQDMVIYQVLNSPMSSHSTLPPADDQPNANSSRRLNPPARTI 60

Query: 61  AKKHYRGVRQRPWGKYAAEIRDSTRHGARVWLGTFATAEEAALAYDTAAFNMRGPKALLN 120
           AKKHYRGVRQRPWGKYAAEIRDSTRHGARVWLGTFATAEEAALAYDTAAF MRGPKALLN
Sbjct: 61  AKKHYRGVRQRPWGKYAAEIRDSTRHGARVWLGTFATAEEAALAYDTAAFRMRGPKALLN 120

Query: 121 FPPEVVAAAAAAAAKTTTFPPSKRKLNAEPSGSSSSTISIATSRSESDSSAAE 171
           FPPEVVAAAAAA   TTT PPSKRK NAEP GSSSSTIS+ATSRSESD SA E
Sbjct: 121 FPPEVVAAAAAAKT-TTTSPPSKRKPNAEPWGSSSSTISLATSRSESDCSAPE 172

[Close]

BLAST of CcUC04G078200.1 vs. ExPASy TrEMBL
Match: A0A0A0KKA5 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G518290 PE=4 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 1.8e-66
Identity = 145/178 (81.46%), Postives = 152/178 (85.39%), Query Frame = 0


Query: 1   MVLASHSHSDLPFNENDSQDMVIYEVLNGPMSSHSTLPPAADQPNAD--------RRLNP 60
           MVL S++ SDLPFNENDS+DMVIY+VLN PMSSHSTLP A DQPNA+         RLNP
Sbjct: 1   MVLGSNAQSDLPFNENDSEDMVIYQVLNSPMSSHSTLPAADDQPNANANANANASHRLNP 60

Query: 61  PARTIAKKHYRGVRQRPWGKYAAEIRDSTRHGARVWLGTFATAEEAALAYDTAAFNMRGP 120
           PARTIAKKHYRGVRQRPWGKYAAEIRDSTRHGARVWLGTFATAEEAALAYDTAAF MRG 
Sbjct: 61  PARTIAKKHYRGVRQRPWGKYAAEIRDSTRHGARVWLGTFATAEEAALAYDTAAFTMRGS 120

Query: 121 KALLNFPPEVVAAAAAAAAKTTTFPPSKRKLNAEPSGSSSSTISIATSRSESDSSAAE 171
           KALLNFPPEVVAAAAAA   TTT PPSKRK N EP GSSSSTIS+ATSR+ESD  A E
Sbjct: 121 KALLNFPPEVVAAAAAAKT-TTTSPPSKRKPNVEPCGSSSSTISLATSRTESDCKAPE 177

[Close]

BLAST of CcUC04G078200.1 vs. ExPASy TrEMBL
Match: A0A6J1EGD9 (pathogenesis-related genes transcriptional activator PTI5-like OS=Cucurbita moschata OX=3662 GN=LOC111433931 PE=4 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 2.7e-54
Identity = 135/174 (77.59%), Postives = 140/174 (80.46%), Query Frame = 0


Query: 1   MVLASHSHSDLPFNENDSQDMVIYEVLNGPMSSH-STLPPAADQPN---ADRRLNPPART 60
           MVLA  SHSDLPFNENDSQDMVIY+VLN PMSSH ST  P+ADQPN   A R  N  A  
Sbjct: 1   MVLA--SHSDLPFNENDSQDMVIYQVLNQPMSSHNSTTLPSADQPNTNAAARHHNSAAGG 60

Query: 61  IAKKHYRGVRQRPWGKYAAEIRDSTRHGARVWLGTFATAEEAALAYDTAAFNMRGPKALL 120
           IAKKHYRGVR+RPWGKYAAEIRDSTR G RVWLGTFATAEEAALAYD AAFNMRGPKALL
Sbjct: 61  IAKKHYRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFATAEEAALAYDRAAFNMRGPKALL 120

Query: 121 NFPPEVVAAAAAAAAKTTTFPPSKRKLNAEPSGSSSSTISIATSRSESDSSAAE 171
           NFPPEVVAAAAAA   TTT PP        PSGSSSST+S+ATSRSES   AAE
Sbjct: 121 NFPPEVVAAAAAADTTTTT-PP--------PSGSSSSTVSMATSRSESVRRAAE 163

[Close]

BLAST of CcUC04G078200.1 vs. ExPASy TrEMBL
Match: A0A6J1KN87 (pathogenesis-related genes transcriptional activator PTI5-like OS=Cucurbita maxima OX=3661 GN=LOC111496832 PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 1.0e-53
Identity = 134/174 (77.01%), Postives = 138/174 (79.31%), Query Frame = 0


Query: 1   MVLASHSHSDLPFNENDSQDMVIYEVLNGPMSSH-STLPPAADQPN---ADRRLNPPART 60
           MVLA   HSDLPFNENDSQDMVIY+VLN PMSSH ST  P+ADQPN   A R  N  A  
Sbjct: 1   MVLA--PHSDLPFNENDSQDMVIYQVLNQPMSSHNSTTLPSADQPNTNAAARHHNSAAGG 60

Query: 61  IAKKHYRGVRQRPWGKYAAEIRDSTRHGARVWLGTFATAEEAALAYDTAAFNMRGPKALL 120
           IAKKHYRGVR+RPWGKYAAEIRDSTR G RVWLGTFATAEEAALAYD AAFNMRGPKALL
Sbjct: 61  IAKKHYRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFATAEEAALAYDRAAFNMRGPKALL 120

Query: 121 NFPPEVVAAAAAAAAKTTTFPPSKRKLNAEPSGSSSSTISIATSRSESDSSAAE 171
           NFPPEVVAAAAA    TTT PP        PSGSSSST+SIATSRSES   AAE
Sbjct: 121 NFPPEVVAAAAAETTTTTT-PP--------PSGSSSSTVSIATSRSESFRRAAE 163

[Close]

BLAST of CcUC04G078200.1 vs. TAIR 10
Match: AT4G17500.1 (ethylene responsive element binding factor 1 )

HSP 1 Score: 122.5 bits (306), Expect = 3.3e-28
Identity = 71/146 (48.63%), Postives = 86/146 (58.90%), Query Frame = 0


Query: 5   SHSHSDLPFNENDSQDMVIYEVLNGPMSSHSTLPPAADQPNADRRLNPPAR--------- 64
           + S  DLP  ENDS+DM++Y +LN   + H    P++   + DR   P  +         
Sbjct: 65  TESWGDLPLKENDSEDMLVYGILND--AFHGGWEPSSSSSDEDRSSFPSVKIETPESFAA 124

Query: 65  ------------------TIAK-KHYRGVRQRPWGKYAAEIRDSTRHGARVWLGTFATAE 123
                             T AK KHYRGVRQRPWGK+AAEIRD  ++GARVWLGTF TAE
Sbjct: 125 VDSVPVKKEKTSPVSAAVTAAKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAE 184

[Close]

BLAST of CcUC04G078200.1 vs. TAIR 10
Match: AT3G23240.1 (ethylene response factor 1 )

HSP 1 Score: 120.9 bits (302), Expect = 9.7e-28
Identity = 64/120 (53.33%), Postives = 83/120 (69.17%), Query Frame = 0


Query: 4   ASHSHSDLPFNENDSQDMVIYEVLNGPMSSHSTLPPAADQPNADRRLNPPARTIAKKHYR 63
           +S ++  LPFNENDS++M +Y ++       ST     D  + D  +   +   ++K YR
Sbjct: 29  SSSNNYSLPFNENDSEEMFLYGLI-----EQSTQQTYIDSDSQDLPIKSVSSRKSEKSYR 88

Query: 64  GVRQRPWGKYAAEIRDSTRHGARVWLGTFATAEEAALAYDTAAFNMRGPKALLNFPPEVV 123
           GVR+RPWGK+AAEIRDSTR+G RVWLGTF +AEEAALAYD AAF+MRG  A+LNF  E V
Sbjct: 89  GVRRRPWGKFAAEIRDSTRNGIRVWLGTFESAEEAALAYDQAAFSMRGSSAILNFSAERV 143

[Close]

BLAST of CcUC04G078200.1 vs. TAIR 10
Match: AT5G47220.1 (ethylene responsive element binding factor 2 )

HSP 1 Score: 117.5 bits (293), Expect = 1.1e-26
Identity = 79/178 (44.38%), Postives = 101/178 (56.74%), Query Frame = 0


Query: 5   SHSHSDLPFNENDSQDMVIYEVLNGPM---SSHSTLPPAADQP--------------NAD 64
           + S   LP  ENDS+DM++Y +L       +S S L    D P                 
Sbjct: 42  TESWGGLPLKENDSEDMLVYGLLKDAFHFDTSSSDLSCLFDFPAVKVEPTENFTAMEEKP 101

Query: 65  RRLNPPARTIAK-KHYRGVRQRPWGKYAAEIRDSTRHGARVWLGTFATAEEAALAYDTAA 124
           ++  P   T  K KHYRGVRQRPWGK+AAEIRD  ++GARVWLGTF TAE+AALAYD AA
Sbjct: 102 KKAIPVTETAVKAKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDIAA 161

Query: 125 FNMRGPKALLNFPPEVVAAAAAAAAKTTTFPPSKRKLNAEPSGSSSSTISIATSRSES 165
           F MRG +ALLNFP            +  +  P   ++ ++ S SSSS+ S +TS SE+
Sbjct: 162 FRMRGSRALLNFP-----------LRVNSGEPDPVRITSKRSSSSSSSSSSSTSSSEN 208

[Close]

BLAST of CcUC04G078200.1 vs. TAIR 10
Match: AT2G44840.1 (ethylene-responsive element binding factor 13 )

HSP 1 Score: 115.2 bits (287), Expect = 5.3e-26
Identity = 64/128 (50.00%), Postives = 82/128 (64.06%), Query Frame = 0


Query: 2   VLASHSHSDLPFNENDSQDMVIYEVLNGPMSSHST--LPPAADQPNADRRLNPPARTIAK 61
           V+ + + SDLP + +DSQDM IY  L   +SS  T  +PP       ++   PPA   + 
Sbjct: 25  VILNDNWSDLPLSVDDSQDMAIYNTLRDAVSSGWTPSVPPVTSPAEENK---PPATKASG 84

Query: 62  KH--------YRGVRQRPWGKYAAEIRDSTRHGARVWLGTFATAEEAALAYDTAAFNMRG 120
            H        YRGVR+RPWGK+AAEIRD  ++GARVWLGT+ T E+AA+AYD AAF +RG
Sbjct: 85  SHAPRQKGMQYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYETPEDAAVAYDRAAFQLRG 144

[Close]

BLAST of CcUC04G078200.1 vs. TAIR 10
Match: AT3G23220.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 104.4 bits (259), Expect = 9.4e-23
Identity = 49/60 (81.67%), Postives = 53/60 (88.33%), Query Frame = 0


Query: 62  YRGVRQRPWGKYAAEIRDSTRHGARVWLGTFATAEEAALAYDTAAFNMRGPKALLNFPPE 121
           YRGVR+RPWGKYAAEIRDS RHGARVWLGTF TAE+AA AYD AAF MRG +A+LNFP E
Sbjct: 14  YRGVRKRPWGKYAAEIRDSARHGARVWLGTFNTAEDAARAYDRAAFGMRGQRAILNFPHE 73

The following BLAST results are available for this feature:

BLAST of CcUC04G078200.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0052648.1	2.3e-71	88.44	pathogenesis-related genes transcriptional activator PTI5-like [Cucumis melo var...	[more]
XP_038881227.1	1.3e-69	87.43	pathogenesis-related genes transcriptional activator PTI5-like [Benincasa hispid...	[more]
XP_008439787.1	6.2e-69	87.28	PREDICTED: pathogenesis-related genes transcriptional activator PTI5-like [Cucum...	[more]
KAE8647706.1	3.8e-66	81.46	hypothetical protein Csa_003722 [Cucumis sativus]	[more]
XP_004134941.2	3.8e-66	81.46	pathogenesis-related genes transcriptional activator PTI5 [Cucumis sativus]	[more]

BLAST of CcUC04G078200.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04681	9.7e-33	57.05	Pathogenesis-related genes transcriptional activator PTI5 OS=Solanum lycopersicu...	[more]
A0A3Q7I5Y9	3.6e-27	55.17	Ethylene-response factor C3 OS=Solanum lycopersicum OX=4081 GN=ERF.C.3 PE=2 SV=1	[more]
O80337	4.7e-27	48.63	Ethylene-responsive transcription factor 1A OS=Arabidopsis thaliana OX=3702 GN=E...	[more]
Q8LDC8	1.4e-26	53.33	Ethylene-responsive transcription factor 1B OS=Arabidopsis thaliana OX=3702 GN=E...	[more]
O80338	1.5e-25	44.38	Ethylene-responsive transcription factor 2 OS=Arabidopsis thaliana OX=3702 GN=ER...	[more]

BLAST of CcUC04G078200.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CPS3	1.1e-71	88.44	Pathogenesis-related genes transcriptional activator PTI5-like OS=Cucumis melo v...	[more]
A0A1S3AZ58	3.0e-69	87.28	pathogenesis-related genes transcriptional activator PTI5-like OS=Cucumis melo O...	[more]
A0A0A0KKA5	1.8e-66	81.46	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G518290 PE=...	[more]
A0A6J1EGD9	2.7e-54	77.59	pathogenesis-related genes transcriptional activator PTI5-like OS=Cucurbita mosc...	[more]
A0A6J1KN87	1.0e-53	77.01	pathogenesis-related genes transcriptional activator PTI5-like OS=Cucurbita maxi...	[more]

BLAST of CcUC04G078200.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G17500.1	3.3e-28	48.63	ethylene responsive element binding factor 1	[more]
AT3G23240.1	9.7e-28	53.33	ethylene response factor 1	[more]
AT5G47220.1	1.1e-26	44.38	ethylene responsive element binding factor 2	[more]
AT2G44840.1	5.3e-26	50.00	ethylene-responsive element binding factor 13	[more]
AT3G23220.1	9.4e-23	81.67	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 85..101 score: 71.44 coord: 62..73 score: 73.18
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 61..125 e-value: 1.7E-37 score: 140.6
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 61..111 e-value: 4.8E-16 score: 58.8
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 61..119 score: 23.156059
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 60..119 e-value: 1.18755E-29 score: 101.579
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 60..120 e-value: 1.5E-27 score: 97.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 137..170
None	No IPR available	PANTHER	PTHR31190:SF173	PATHOGENESIS-RELATED GENES TRANSCRIPTIONAL ACTIVATOR PTI5	coord: 6..135
IPR044808	Ethylene-responsive transcription factor	PANTHER	PTHR31190	DNA-BINDING DOMAIN	coord: 6..135
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 61..121

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CcUC04G078200	CcUC04G078200	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC04G078200.1-exon	CcUC04G078200.1-exon-CicolChr04:32787522..32788034	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC04G078200.1-cds	CcUC04G078200.1-cds-CicolChr04:32787522..32788034	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CcUC04G078200.1	CcUC04G078200.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009873	ethylene-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity