CcUC04G066960.1 (mRNA) Watermelon (PI 537277) v1

Overview


Name	CcUC04G066960.1
Type	mRNA
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	60S ribosomal protein L4-like
Location	CicolChr04: 23795713 .. 23797866 (+)
Sequence length	1342
RNA-Seq Expression	CcUC04G066960.1
Synteny	CcUC04G066960.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGCCTCAAAACCCTAATTCTTCCTTCGTTGCTCTCCTCTGTTCTTCACATCACACACAGTCACTCTCCAATGGCCGCTGCCGCCCGCCCCCTGGTTTCCGTTCAGTCCCTTGAAGGGGACATGGCTACCGATGCGGCGCCCACCGTCCCGCTTCCGGACGTGATGAAGGCTTCAATTCGGCCGGACATTGTTAGCTTTGTCCATTCCAACATCTCGAAGAATAGCCGTCAGCCCTACGCCGTCAGTAAGCGCGCCGGCCACCAAACCTCCGCGGAGTCCTGGGGTACTGGACGTGCTGTGTCCCGTATTCCCCGTGTTCCCGGTGGCGGTACTCACCGTGCTGGTCAGGGTGCTTTCGGAAACATGTGTCGTGGTGGTCGAATGTTCGCTCCGACTAAGATCTGGCGCCGATGGCACCGCAAGATCAATGTGAATCAGAAGAGGTATGCTGTTGTGTCGGCTATCGCGGCCTCGGCTGTTCCATCTTTGGTTCTTGCTCGCGGTCATCGAATCGAGTCTGTCCCTGAATTGCCACTTGTTGTGAGCGATTCGGCTGAAGGCGTTGAGAAGACCTCTGCTGCAATCAAGGTTCTTAAACAGGTTGGGGCGTTTCCCGATGCTGAGAAGGCGAAAGATAGCCATGCGATCCGTCCTGGTAAGGGTAAGATGAGGAACCGTCGTTATATTTCTCGCAAGGGTCCATTGATTGTTTACGGAACTGAGGGTGCTAAGCTTGTTAAGGCCTTCCGTAACATTCCCGGAGTTGAGATTGCTAACGTTGAGAGGCTGAATTTGTTGAAGCTTGCTCCCGGTGGACACCTTGGAAGGTTTGTGATCTGGACCAAGTCTGCTTTTGAGAAGCTTGATTCTATCTATGGATCTTTTGAGAAGCCTTCAGAGAAGAAAAAGGGTTATGTCCTTCCGAGGTCTAAGATGGTGAATGCTGATTTGGCAAGGATTATTAACTCTGATGAAGTACAATCTGTAGTGAAGCCAATTAAGAAGGATGCTAAGAGACCTCCATTGAAGAAGAACCCATTGAAGAACTTGAACGCCATGCTCAAGCTTAACCCATATGCTAAGACAGCTAGAAGAATGGCTCTTTTGGCAGAGGAGCAACGTGTGAAGGCTAAGAAGGAGAAACTCGACAAGAAGAGGAATTTGACTACAAAGGTACACCTTTCCCGTTCTTAGTGAGATCATTTGCATGTTGCTCATCAATTGTTATTTACATTCTTTTGGCAATCAAGTAGTGCATATGTTCATATTAGATTGGATTTATGGTATTTCCTGCGTTCAAATTCTTCTAATTATTTGTTGCTTTGGGGTTGGTTTTCATTCTTTGTTTGTTGTTTATTTTGATTGGTCATCTACTTGCATTCTTTTTTAATGTCTGTACGTGGTTCTCAGTTATGGGGTCTGCTGTTGGTAAGCAATATGTTTAATTATTTCAAGATATCATATAACTTGGATGTGCATCCATTTACATGTTTACTGTTGACTCTTTCTACTTCCGTTTTTTTATAGCTTGATTTGTCATAGATTTAACATTAATATATTCTTGATGCGTTCAAACTACTTGATACAAACACACTTTTCGATCCTGGCACACATGTAAAATTAACTGTAATGATTTGTCATAGATTTAACATTAGCGAAAATGTCGATTACAGTTTCAGTTATGAGATGCAATGTTTGCTTCATAACTGATTAGATTAGTTGATTTCTCAACCAATCCTTTTTTGGTGTGCTTGCTTTTTCCAGCCTCTTTAGTACTAGTAATCTGTGTTAGATTTTAGCTTAAGCTTTTTGGGCAATAAGTGATCATTTGCCTTATCTTCTCAAGGAAGCAGTTTTTATCCTTCAGAAATTTTGTTTACATCTCTGTATTTCTCATTTTAAACTAAAATCATCAATACCCGTGAGAACAAGTTGTTTGACATGGGGGTACAGGTGTTCATATTATCTGCATTTTGTGATTGTAGAACATCCTAACCCCGGTGTTGACTTTCTTTCCCCTTTTGTACTTGAACCTACAGGAGGAGGCTACTGCAATCAGAGCTGCAGGAAAGGCTTGGTATCAGACGATGATCTCAGACAGTGATTACACCGAGTTCGAGAACTTCTCGAAATGGCTTGGCGTTTCTCAGTAA

mRNA sequence

AAGCCTCAAAACCCTAATTCTTCCTTCGTTGCTCTCCTCTGTTCTTCACATCACACACAGTCACTCTCCAATGGCCGCTGCCGCCCGCCCCCTGGTTTCCGTTCAGTCCCTTGAAGGGGACATGGCTACCGATGCGGCGCCCACCGTCCCGCTTCCGGACGTGATGAAGGCTTCAATTCGGCCGGACATTGTTAGCTTTGTCCATTCCAACATCTCGAAGAATAGCCGTCAGCCCTACGCCGTCAGTAAGCGCGCCGGCCACCAAACCTCCGCGGAGTCCTGGGGTACTGGACGTGCTGTGTCCCGTATTCCCCGTGTTCCCGGTGGCGGTACTCACCGTGCTGGTCAGGGTGCTTTCGGAAACATGTGTCGTGGTGGTCGAATGTTCGCTCCGACTAAGATCTGGCGCCGATGGCACCGCAAGATCAATGTGAATCAGAAGAGGTATGCTGTTGTGTCGGCTATCGCGGCCTCGGCTGTTCCATCTTTGGTTCTTGCTCGCGGTCATCGAATCGAGTCTGTCCCTGAATTGCCACTTGTTGTGAGCGATTCGGCTGAAGGCGTTGAGAAGACCTCTGCTGCAATCAAGGTTCTTAAACAGGTTGGGGCGTTTCCCGATGCTGAGAAGGCGAAAGATAGCCATGCGATCCGTCCTGGTAAGGGTAAGATGAGGAACCGTCGTTATATTTCTCGCAAGGGTCCATTGATTGTTTACGGAACTGAGGGTGCTAAGCTTGTTAAGGCCTTCCGTAACATTCCCGGAGTTGAGATTGCTAACGTTGAGAGGCTGAATTTGTTGAAGCTTGCTCCCGGTGGACACCTTGGAAGGTTTGTGATCTGGACCAAGTCTGCTTTTGAGAAGCTTGATTCTATCTATGGATCTTTTGAGAAGCCTTCAGAGAAGAAAAAGGGTTATGTCCTTCCGAGGTCTAAGATGGTGAATGCTGATTTGGCAAGGATTATTAACTCTGATGAAGTACAATCTGTAGTGAAGCCAATTAAGAAGGATGCTAAGAGACCTCCATTGAAGAAGAACCCATTGAAGAACTTGAACGCCATGCTCAAGCTTAACCCATATGCTAAGACAGCTAGAAGAATGGCTCTTTTGGCAGAGGAGCAACGTGTGAAGGCTAAGAAGGAGAAACTCGACAAGAAGAGGAATTTGACTACAAAGAACATCCTAACCCCGGTGTTGACTTTCTTTCCCCTTTTGTACTTGAACCTACAGGAGGAGGCTACTGCAATCAGAGCTGCAGGAAAGGCTTGGTATCAGACGATGATCTCAGACAGTGATTACACCGAGTTCGAGAACTTCTCGAAATGGCTTGGCGTTTCTCAGTAA

Coding sequence (CDS)

ATGGCCGCTGCCGCCCGCCCCCTGGTTTCCGTTCAGTCCCTTGAAGGGGACATGGCTACCGATGCGGCGCCCACCGTCCCGCTTCCGGACGTGATGAAGGCTTCAATTCGGCCGGACATTGTTAGCTTTGTCCATTCCAACATCTCGAAGAATAGCCGTCAGCCCTACGCCGTCAGTAAGCGCGCCGGCCACCAAACCTCCGCGGAGTCCTGGGGTACTGGACGTGCTGTGTCCCGTATTCCCCGTGTTCCCGGTGGCGGTACTCACCGTGCTGGTCAGGGTGCTTTCGGAAACATGTGTCGTGGTGGTCGAATGTTCGCTCCGACTAAGATCTGGCGCCGATGGCACCGCAAGATCAATGTGAATCAGAAGAGGTATGCTGTTGTGTCGGCTATCGCGGCCTCGGCTGTTCCATCTTTGGTTCTTGCTCGCGGTCATCGAATCGAGTCTGTCCCTGAATTGCCACTTGTTGTGAGCGATTCGGCTGAAGGCGTTGAGAAGACCTCTGCTGCAATCAAGGTTCTTAAACAGGTTGGGGCGTTTCCCGATGCTGAGAAGGCGAAAGATAGCCATGCGATCCGTCCTGGTAAGGGTAAGATGAGGAACCGTCGTTATATTTCTCGCAAGGGTCCATTGATTGTTTACGGAACTGAGGGTGCTAAGCTTGTTAAGGCCTTCCGTAACATTCCCGGAGTTGAGATTGCTAACGTTGAGAGGCTGAATTTGTTGAAGCTTGCTCCCGGTGGACACCTTGGAAGGTTTGTGATCTGGACCAAGTCTGCTTTTGAGAAGCTTGATTCTATCTATGGATCTTTTGAGAAGCCTTCAGAGAAGAAAAAGGGTTATGTCCTTCCGAGGTCTAAGATGGTGAATGCTGATTTGGCAAGGATTATTAACTCTGATGAAGTACAATCTGTAGTGAAGCCAATTAAGAAGGATGCTAAGAGACCTCCATTGAAGAAGAACCCATTGAAGAACTTGAACGCCATGCTCAAGCTTAACCCATATGCTAAGACAGCTAGAAGAATGGCTCTTTTGGCAGAGGAGCAACGTGTGAAGGCTAAGAAGGAGAAACTCGACAAGAAGAGGAATTTGACTACAAAGAACATCCTAACCCCGGTGTTGACTTTCTTTCCCCTTTTGTACTTGAACCTACAGGAGGAGGCTACTGCAATCAGAGCTGCAGGAAAGGCTTGGTATCAGACGATGATCTCAGACAGTGATTACACCGAGTTCGAGAACTTCTCGAAATGGCTTGGCGTTTCTCAGTAA

Protein sequence

MAAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGAFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLARIINSDEVQSVVKPIKKDAKRPPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDKKRNLTTKNILTPVLTFFPLLYLNLQEEATAIRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ

Homology

[Close]

BLAST of CcUC04G066960.1 vs. NCBI nr
Match: XP_038882700.1 (60S ribosomal protein L4 [Benincasa hispida])

HSP 1 Score: 762.7 bits (1968), Expect = 1.7e-216
Identity = 400/423 (94.56%), Postives = 403/423 (95.27%), Query Frame = 0


Query: 1   MAAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK 60
           MAAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK
Sbjct: 1   MAAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK 60

Query: 61  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 120
           RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN
Sbjct: 61  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 120

Query: 121 VNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGA 180
           VNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGA
Sbjct: 121 VNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGA 180

Query: 181 FPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERL 240
           FPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERL
Sbjct: 181 FPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERL 240

Query: 241 NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLARIINS 300
           NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKM+NADL+RIINS
Sbjct: 241 NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMMNADLSRIINS 300

Query: 301 DEVQSVVKPIKKDAKRPPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD 360
           DEVQSVVKPIKK+ KRP LKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD
Sbjct: 301 DEVQSVVKPIKKNVKRPSLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD 360

Query: 361 KKRNLTTKNILTPVLTFFPLLYLNLQEEATAIRAAGKAWYQTMISDSDYTEFENFSKWLG 420
           KKRNLTTK                  EEATAIRAAGKAWYQTMISDSDYTEFENFSKWLG
Sbjct: 361 KKRNLTTK------------------EEATAIRAAGKAWYQTMISDSDYTEFENFSKWLG 405

Query: 421 VSQ 424
           VSQ
Sbjct: 421 VSQ 405

[Close]

BLAST of CcUC04G066960.1 vs. NCBI nr
Match: XP_008449286.1 (PREDICTED: 60S ribosomal protein L4-like [Cucumis melo] >KAA0047286.1 60S ribosomal protein L4-like [Cucumis melo var. makuwa])

HSP 1 Score: 760.8 bits (1963), Expect = 6.4e-216
Identity = 399/423 (94.33%), Postives = 402/423 (95.04%), Query Frame = 0


Query: 1   MAAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK 60
           MAAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK
Sbjct: 1   MAAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK 60

Query: 61  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 120
           RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN
Sbjct: 61  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 120

Query: 121 VNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGA 180
           VNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGA
Sbjct: 121 VNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGA 180

Query: 181 FPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERL 240
           FPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYG EGAKLVKAFRNIPGVEIANVERL
Sbjct: 181 FPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGAEGAKLVKAFRNIPGVEIANVERL 240

Query: 241 NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLARIINS 300
           NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADL+RIINS
Sbjct: 241 NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINS 300

Query: 301 DEVQSVVKPIKKDAKRPPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD 360
           DEVQSVVKPIKK+ KRP LKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD
Sbjct: 301 DEVQSVVKPIKKNVKRPQLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD 360

Query: 361 KKRNLTTKNILTPVLTFFPLLYLNLQEEATAIRAAGKAWYQTMISDSDYTEFENFSKWLG 420
           KKRNLTTK                  E+ATAIRAAGKAWYQTMISDSDYTEFENFSKWLG
Sbjct: 361 KKRNLTTK------------------EDATAIRAAGKAWYQTMISDSDYTEFENFSKWLG 405

Query: 421 VSQ 424
           VSQ
Sbjct: 421 VSQ 405

[Close]

BLAST of CcUC04G066960.1 vs. NCBI nr
Match: XP_004142108.1 (60S ribosomal protein L4 [Cucumis sativus] >KGN54187.1 hypothetical protein Csa_018176 [Cucumis sativus])

HSP 1 Score: 758.4 bits (1957), Expect = 3.2e-215
Identity = 398/423 (94.09%), Postives = 402/423 (95.04%), Query Frame = 0


Query: 1   MAAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK 60
           MAAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK
Sbjct: 1   MAAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK 60

Query: 61  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 120
           RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN
Sbjct: 61  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 120

Query: 121 VNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGA 180
           VNQKRYAVVSAIAASAVPSLVLARGHRIE+VPELPLVVSDSAEGVEKTSAAIKVLKQVGA
Sbjct: 121 VNQKRYAVVSAIAASAVPSLVLARGHRIETVPELPLVVSDSAEGVEKTSAAIKVLKQVGA 180

Query: 181 FPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERL 240
           FPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERL
Sbjct: 181 FPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERL 240

Query: 241 NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLARIINS 300
           NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEK SEKKKGYVLPRSKMVNADL+RIINS
Sbjct: 241 NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLSRIINS 300

Query: 301 DEVQSVVKPIKKDAKRPPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD 360
           DEVQSVVKPIKK+ KRP LKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD
Sbjct: 301 DEVQSVVKPIKKNVKRPQLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD 360

Query: 361 KKRNLTTKNILTPVLTFFPLLYLNLQEEATAIRAAGKAWYQTMISDSDYTEFENFSKWLG 420
           KKRNLTTK                  E+ATAIRAAGKAWYQTMISDSDYTEFENFSKWLG
Sbjct: 361 KKRNLTTK------------------EDATAIRAAGKAWYQTMISDSDYTEFENFSKWLG 405

Query: 421 VSQ 424
           VSQ
Sbjct: 421 VSQ 405

[Close]

BLAST of CcUC04G066960.1 vs. NCBI nr
Match: XP_022925909.1 (60S ribosomal protein L4 [Cucurbita moschata] >XP_023544338.1 60S ribosomal protein L4 [Cucurbita pepo subsp. pepo] >KAG6604443.1 60S ribosomal protein L4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034587.1 60S ribosomal protein L4 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 756.9 bits (1953), Expect = 9.3e-215
Identity = 395/423 (93.38%), Postives = 401/423 (94.80%), Query Frame = 0


Query: 1   MAAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK 60
           MAAAARPLVSVQSLEGDMATDA PTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK
Sbjct: 1   MAAAARPLVSVQSLEGDMATDAVPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK 60

Query: 61  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 120
           RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN
Sbjct: 61  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 120

Query: 121 VNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGA 180
           VNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAA+KVLKQVGA
Sbjct: 121 VNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAALKVLKQVGA 180

Query: 181 FPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERL 240
           FPDAEKAKDSH+IRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERL
Sbjct: 181 FPDAEKAKDSHSIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERL 240

Query: 241 NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLARIINS 300
           NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADL+RIINS
Sbjct: 241 NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINS 300

Query: 301 DEVQSVVKPIKKDAKRPPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD 360
           DEVQSVVKPIKK+ KR PLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD
Sbjct: 301 DEVQSVVKPIKKEVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD 360

Query: 361 KKRNLTTKNILTPVLTFFPLLYLNLQEEATAIRAAGKAWYQTMISDSDYTEFENFSKWLG 420
           KKRNLTTK                  EEAT I++AGKAWYQTMISDSDYTEFENFSKWLG
Sbjct: 361 KKRNLTTK------------------EEATTIKSAGKAWYQTMISDSDYTEFENFSKWLG 405

Query: 421 VSQ 424
           VSQ
Sbjct: 421 VSQ 405

[Close]

BLAST of CcUC04G066960.1 vs. NCBI nr
Match: XP_022972645.1 (60S ribosomal protein L4-like [Cucurbita maxima] >XP_023517997.1 60S ribosomal protein L4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 753.4 bits (1944), Expect = 1.0e-213
Identity = 395/421 (93.82%), Postives = 399/421 (94.77%), Query Frame = 0


Query: 3   AAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKRA 62
           AAARPLVSVQSLEGDMATDAAP VPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKRA
Sbjct: 4   AAARPLVSVQSLEGDMATDAAPGVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKRA 63

Query: 63  GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 122
           GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN
Sbjct: 64  GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 123

Query: 123 QKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGAFP 182
           QKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGAFP
Sbjct: 124 QKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGAFP 183

Query: 183 DAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLNL 242
           DAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLNL
Sbjct: 184 DAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLNL 243

Query: 243 LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLARIINSDE 302
           LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADL+RIINSDE
Sbjct: 244 LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINSDE 303

Query: 303 VQSVVKPIKKDAKRPPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDKK 362
           VQSVVKPIKK  KR PLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDKK
Sbjct: 304 VQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDKK 363

Query: 363 RNLTTKNILTPVLTFFPLLYLNLQEEATAIRAAGKAWYQTMISDSDYTEFENFSKWLGVS 422
           RNLTTK                  EEAT+I+AAGKAWYQTMISDSDYTEF+NFSKWLGVS
Sbjct: 364 RNLTTK------------------EEATSIKAAGKAWYQTMISDSDYTEFDNFSKWLGVS 406

Query: 423 Q 424
           Q
Sbjct: 424 Q 406

[Close]

BLAST of CcUC04G066960.1 vs. ExPASy Swiss-Prot
Match: Q9XF97 (60S ribosomal protein L4 OS=Prunus armeniaca OX=36596 GN=RPL4 PE=2 SV=1)

HSP 1 Score: 694.5 bits (1791), Expect = 7.4e-199
Identity = 359/422 (85.07%), Postives = 385/422 (91.23%), Query Frame = 0


Query: 2   AAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKR 61
           AAAARPLV+VQSLEGDMATD   TV LPDVMKASIRPDIV+FVHSNISKNSRQPYAVSK+
Sbjct: 5   AAAARPLVTVQSLEGDMATDQTQTVALPDVMKASIRPDIVTFVHSNISKNSRQPYAVSKK 64

Query: 62  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV 121
           AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV
Sbjct: 65  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV 124

Query: 122 NQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGAF 181
           NQKRYAVVSAIAASAVPSLVLARGH+IE+VPELPLVVSDS EGVE+TSAA+KVLKQ+GA+
Sbjct: 125 NQKRYAVVSAIAASAVPSLVLARGHKIETVPELPLVVSDSIEGVEETSAALKVLKQIGAY 184

Query: 182 PDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLN 241
            DAEKAKDSH+IRPGKGKMRNRRYI+RKGPLIVYGTEGAKLVKAFRNIPG++I NVERLN
Sbjct: 185 SDAEKAKDSHSIRPGKGKMRNRRYINRKGPLIVYGTEGAKLVKAFRNIPGIDIINVERLN 244

Query: 242 LLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLARIINSD 301
           LLKLAPGGHLGRFV+WTKSAFEKLDSIYGSF+K SEKK GYVLPRSKMVNADLARIINSD
Sbjct: 245 LLKLAPGGHLGRFVVWTKSAFEKLDSIYGSFDKVSEKKNGYVLPRSKMVNADLARIINSD 304

Query: 302 EVQSVVKPIKKDAKRPPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDK 361
           EVQSVV PI++ +KR PLKKNPL+ LN MLKLNPYAKTARRM+LLAE +RVKAKKEKLDK
Sbjct: 305 EVQSVVSPIQEGSKRAPLKKNPLRILNTMLKLNPYAKTARRMSLLAEAERVKAKKEKLDK 364

Query: 362 KRNLTTKNILTPVLTFFPLLYLNLQEEATAIRAAGKAWYQTMISDSDYTEFENFSKWLGV 421
           KR   +K                  EEA+ I+AAGKAWYQTMISDSDYTEF+NF+KWLGV
Sbjct: 365 KRKPISK------------------EEASTIKAAGKAWYQTMISDSDYTEFDNFTKWLGV 408

Query: 422 SQ 424
           SQ
Sbjct: 425 SQ 408

[Close]

BLAST of CcUC04G066960.1 vs. ExPASy Swiss-Prot
Match: Q9SF40 (60S ribosomal protein L4-1 OS=Arabidopsis thaliana OX=3702 GN=RPL4A PE=1 SV=1)

HSP 1 Score: 669.5 bits (1726), Expect = 2.6e-191
Identity = 340/422 (80.57%), Postives = 379/422 (89.81%), Query Frame = 0


Query: 2   AAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKR 61
           AAAARPLV++Q+L+GDM+TD + TV LPDVM A +RPDIV+FVH+ IS NSRQPYAVSK+
Sbjct: 3   AAAARPLVTIQTLDGDMSTDQSSTVVLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVSKK 62

Query: 62  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV 121
           AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHR++NV
Sbjct: 63  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRVNV 122

Query: 122 NQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGAF 181
           N KR+A+VSAIAA+AVP+LV+ARGH+IE+VPE+PLVVSDSAE VEKTSAAIKVLKQ+GA+
Sbjct: 123 NMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIGAY 182

Query: 182 PDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLN 241
            DAEKAK+S  IRPGKGKMRNRRYISRKGPL+VYGTEG+K+VKAFRN+PGVE+ +VERLN
Sbjct: 183 DDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVYGTEGSKIVKAFRNLPGVELCHVERLN 242

Query: 242 LLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLARIINSD 301
           LLKLAPGGHLGRFVIWTKSAFEKL+SIYGSFEKPSEKKKGYVLPR+KMVNADLARIINSD
Sbjct: 243 LLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIINSD 302

Query: 302 EVQSVVKPIKKDAKRPPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDK 361
           E+QSVV PIKKDAKR  LKKNPLKNLN MLKLNPYAKTA+RM+LLAE QRVKAKKEKL K
Sbjct: 303 EIQSVVNPIKKDAKRAVLKKNPLKNLNVMLKLNPYAKTAKRMSLLAEAQRVKAKKEKLAK 362

Query: 362 KRNLTTKNILTPVLTFFPLLYLNLQEEATAIRAAGKAWYQTMISDSDYTEFENFSKWLGV 421
           KR   TK                  EEA AI+AAGK+WY+TMISDSDYTEF+NF+KWLG 
Sbjct: 363 KRKTVTK------------------EEALAIKAAGKSWYKTMISDSDYTEFDNFTKWLGA 406

Query: 422 SQ 424
           SQ
Sbjct: 423 SQ 406

[Close]

BLAST of CcUC04G066960.1 vs. ExPASy Swiss-Prot
Match: P49691 (60S ribosomal protein L4-2 OS=Arabidopsis thaliana OX=3702 GN=RPL4D PE=1 SV=2)

HSP 1 Score: 664.1 bits (1712), Expect = 1.1e-189
Identity = 338/422 (80.09%), Postives = 376/422 (89.10%), Query Frame = 0


Query: 2   AAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKR 61
           +AAARPLV+VQ L+GDM+TD + TV LPDVM A +RPDIV+FVH+ IS NSRQPYAVSK+
Sbjct: 4   SAAARPLVTVQGLDGDMSTDQSTTVTLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVSKK 63

Query: 62  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV 121
           AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHR++NV
Sbjct: 64  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRVNV 123

Query: 122 NQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGAF 181
           N KR+A+VSAIAA+AVP+LV+ARGH+IE+VPE+PLVVSDSAE VEKTSAAIKVLKQ+GA+
Sbjct: 124 NMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIGAY 183

Query: 182 PDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLN 241
            DAEKAK+S  IRPGKGKMRNRRYISRKGPL+V+GTEGAK+VKAFRN+PGVE+ +VERLN
Sbjct: 184 DDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVFGTEGAKIVKAFRNLPGVELCHVERLN 243

Query: 242 LLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLARIINSD 301
           LLKLAPGGHLGRFVIWTKSAFEKL+SIYGSFEKPSEKKKGYVLPR+KMVNADLARIINSD
Sbjct: 244 LLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIINSD 303

Query: 302 EVQSVVKPIKKDAKRPPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDK 361
           EVQSVV PIK  +KR  LKKNPLKNLN M KLNPYAKTA+RM+LLAE  RVKAKKEKL+K
Sbjct: 304 EVQSVVNPIKDGSKRAVLKKNPLKNLNVMFKLNPYAKTAKRMSLLAEASRVKAKKEKLEK 363

Query: 362 KRNLTTKNILTPVLTFFPLLYLNLQEEATAIRAAGKAWYQTMISDSDYTEFENFSKWLGV 421
           KR + TK                  EEA AI+AAGKAWYQTMISDSDYTEF+NF+KWLG 
Sbjct: 364 KRKVVTK------------------EEAQAIKAAGKAWYQTMISDSDYTEFDNFTKWLGA 407

Query: 422 SQ 424
           SQ
Sbjct: 424 SQ 407

[Close]

BLAST of CcUC04G066960.1 vs. ExPASy Swiss-Prot
Match: P08429 (60S ribosomal protein L4-A OS=Xenopus laevis OX=8355 GN=rpl4-a PE=2 SV=2)

HSP 1 Score: 435.6 bits (1119), Expect = 6.2e-121
Identity = 219/358 (61.17%), Postives = 276/358 (77.09%), Query Frame = 0


Query: 3   AAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKRA 62
           A ARPL+SV S +G+    +   V +P V +A IRPDIV+FVH+N+ KN+RQPYAVSK A
Sbjct: 6   ACARPLISVYSEKGE---SSGKNVTMPAVFRAPIRPDIVNFVHTNLRKNNRQPYAVSKLA 65

Query: 63  GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 122
           GHQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WRRWHR++N  
Sbjct: 66  GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 125

Query: 123 QKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGAFP 182
           QKRYAV SA+AASA+P+L++++GHRIE +PE+PLVV D  E  +KT  A+ +LK++ A+ 
Sbjct: 126 QKRYAVCSALAASALPALIMSKGHRIEEIPEVPLVVEDKVESYKKTKEAVLLLKKLKAWN 185

Query: 183 DAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLNL 242
           D +K   S  +R GKGKMRNRR I R+GP ++Y  E   LVKAFRNIPG+ + NV +LNL
Sbjct: 186 DIKKVYASQRMRAGKGKMRNRRRIQRRGPCVIY-NENNGLVKAFRNIPGITLLNVSKLNL 245

Query: 243 LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLARIINSDE 302
           L+LAPGGH+GRF IWT+SAF KLD +YG++ K ++ K  Y LP  KM N DL RI+ S E
Sbjct: 246 LRLAPGGHVGRFCIWTESAFRKLDDLYGTWRKSAKLKADYNLPMHKMTNTDLTRILKSQE 305

Query: 303 VQSVVKPIKKDAKRPPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD 361
           +Q  ++   K  KR  LKKNPLKNL  M++LNPYAKTARR A+L + + +KAK++K D
Sbjct: 306 IQRALRAPNKKVKRRELKKNPLKNLRIMMRLNPYAKTARRHAILQQLENIKAKEKKPD 359

[Close]

BLAST of CcUC04G066960.1 vs. ExPASy Swiss-Prot
Match: P02385 (60S ribosomal protein L4-B OS=Xenopus laevis OX=8355 GN=rpl4-b PE=2 SV=2)

HSP 1 Score: 435.3 bits (1118), Expect = 8.1e-121
Identity = 218/358 (60.89%), Postives = 276/358 (77.09%), Query Frame = 0


Query: 3   AAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKRA 62
           A ARPL+SV S +G+    +   V +P V KA IRPDIV+FVH+N+ KN+RQPYAVSK A
Sbjct: 6   ACARPLISVYSEKGE---TSGKNVTMPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSKLA 65

Query: 63  GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 122
           GHQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WRRWHR++N  
Sbjct: 66  GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 125

Query: 123 QKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGAFP 182
           QKRYAV SA+AASA+P+L++++GHRIE +PE+PLVV D  E  +KT  A+ +LK++ A+ 
Sbjct: 126 QKRYAVCSALAASALPALIMSKGHRIEEIPEVPLVVEDKVESYKKTKEAVLLLKKLKAWN 185

Query: 183 DAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLNL 242
           D +K   S  +R GKGKMRNRR I R+GP ++Y  E   ++KAFRNIPG+ + NV +LNL
Sbjct: 186 DIKKVYASQRMRAGKGKMRNRRRIQRRGPCVIY-NENNGIIKAFRNIPGITLLNVSKLNL 245

Query: 243 LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLARIINSDE 302
           L+LAPGGH+GRF IWT+SAF KLD +YG++ K ++ K  Y LP  KM N DL RI+ S E
Sbjct: 246 LRLAPGGHVGRFCIWTESAFRKLDDLYGTWRKSAKLKADYNLPMHKMTNTDLTRILKSQE 305

Query: 303 VQSVVKPIKKDAKRPPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD 361
           +Q  ++   K  KR  LKKNPLKNL  M++LNPYAKTARR A+L + + +KAK++K D
Sbjct: 306 IQRALRAPNKKVKRRELKKNPLKNLRIMMRLNPYAKTARRHAILQQLENIKAKEKKPD 359

[Close]

BLAST of CcUC04G066960.1 vs. ExPASy TrEMBL
Match: A0A5A7TZA0 (60S ribosomal protein L4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold908G00800 PE=3 SV=1)

HSP 1 Score: 760.8 bits (1963), Expect = 3.1e-216
Identity = 399/423 (94.33%), Postives = 402/423 (95.04%), Query Frame = 0


Query: 1   MAAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK 60
           MAAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK
Sbjct: 1   MAAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK 60

Query: 61  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 120
           RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN
Sbjct: 61  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 120

Query: 121 VNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGA 180
           VNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGA
Sbjct: 121 VNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGA 180

Query: 181 FPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERL 240
           FPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYG EGAKLVKAFRNIPGVEIANVERL
Sbjct: 181 FPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGAEGAKLVKAFRNIPGVEIANVERL 240

Query: 241 NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLARIINS 300
           NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADL+RIINS
Sbjct: 241 NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINS 300

Query: 301 DEVQSVVKPIKKDAKRPPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD 360
           DEVQSVVKPIKK+ KRP LKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD
Sbjct: 301 DEVQSVVKPIKKNVKRPQLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD 360

Query: 361 KKRNLTTKNILTPVLTFFPLLYLNLQEEATAIRAAGKAWYQTMISDSDYTEFENFSKWLG 420
           KKRNLTTK                  E+ATAIRAAGKAWYQTMISDSDYTEFENFSKWLG
Sbjct: 361 KKRNLTTK------------------EDATAIRAAGKAWYQTMISDSDYTEFENFSKWLG 405

Query: 421 VSQ 424
           VSQ
Sbjct: 421 VSQ 405

[Close]

BLAST of CcUC04G066960.1 vs. ExPASy TrEMBL
Match: A0A1S3BL28 (60S ribosomal protein L4-like OS=Cucumis melo OX=3656 GN=LOC103491208 PE=3 SV=1)

HSP 1 Score: 760.8 bits (1963), Expect = 3.1e-216
Identity = 399/423 (94.33%), Postives = 402/423 (95.04%), Query Frame = 0


Query: 1   MAAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK 60
           MAAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK
Sbjct: 1   MAAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK 60

Query: 61  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 120
           RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN
Sbjct: 61  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 120

Query: 121 VNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGA 180
           VNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGA
Sbjct: 121 VNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGA 180

Query: 181 FPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERL 240
           FPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYG EGAKLVKAFRNIPGVEIANVERL
Sbjct: 181 FPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGAEGAKLVKAFRNIPGVEIANVERL 240

Query: 241 NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLARIINS 300
           NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADL+RIINS
Sbjct: 241 NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINS 300

Query: 301 DEVQSVVKPIKKDAKRPPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD 360
           DEVQSVVKPIKK+ KRP LKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD
Sbjct: 301 DEVQSVVKPIKKNVKRPQLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD 360

Query: 361 KKRNLTTKNILTPVLTFFPLLYLNLQEEATAIRAAGKAWYQTMISDSDYTEFENFSKWLG 420
           KKRNLTTK                  E+ATAIRAAGKAWYQTMISDSDYTEFENFSKWLG
Sbjct: 361 KKRNLTTK------------------EDATAIRAAGKAWYQTMISDSDYTEFENFSKWLG 405

Query: 421 VSQ 424
           VSQ
Sbjct: 421 VSQ 405

[Close]

BLAST of CcUC04G066960.1 vs. ExPASy TrEMBL
Match: A0A0A0L0Q4 (Ribos_L4_asso_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G292970 PE=3 SV=1)

HSP 1 Score: 758.4 bits (1957), Expect = 1.5e-215
Identity = 398/423 (94.09%), Postives = 402/423 (95.04%), Query Frame = 0


Query: 1   MAAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK 60
           MAAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK
Sbjct: 1   MAAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK 60

Query: 61  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 120
           RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN
Sbjct: 61  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 120

Query: 121 VNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGA 180
           VNQKRYAVVSAIAASAVPSLVLARGHRIE+VPELPLVVSDSAEGVEKTSAAIKVLKQVGA
Sbjct: 121 VNQKRYAVVSAIAASAVPSLVLARGHRIETVPELPLVVSDSAEGVEKTSAAIKVLKQVGA 180

Query: 181 FPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERL 240
           FPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERL
Sbjct: 181 FPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERL 240

Query: 241 NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLARIINS 300
           NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEK SEKKKGYVLPRSKMVNADL+RIINS
Sbjct: 241 NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLSRIINS 300

Query: 301 DEVQSVVKPIKKDAKRPPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD 360
           DEVQSVVKPIKK+ KRP LKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD
Sbjct: 301 DEVQSVVKPIKKNVKRPQLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD 360

Query: 361 KKRNLTTKNILTPVLTFFPLLYLNLQEEATAIRAAGKAWYQTMISDSDYTEFENFSKWLG 420
           KKRNLTTK                  E+ATAIRAAGKAWYQTMISDSDYTEFENFSKWLG
Sbjct: 361 KKRNLTTK------------------EDATAIRAAGKAWYQTMISDSDYTEFENFSKWLG 405

Query: 421 VSQ 424
           VSQ
Sbjct: 421 VSQ 405

[Close]

BLAST of CcUC04G066960.1 vs. ExPASy TrEMBL
Match: A0A6J1EDI0 (60S ribosomal protein L4 OS=Cucurbita moschata OX=3662 GN=LOC111433183 PE=3 SV=1)

HSP 1 Score: 756.9 bits (1953), Expect = 4.5e-215
Identity = 395/423 (93.38%), Postives = 401/423 (94.80%), Query Frame = 0


Query: 1   MAAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK 60
           MAAAARPLVSVQSLEGDMATDA PTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK
Sbjct: 1   MAAAARPLVSVQSLEGDMATDAVPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK 60

Query: 61  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 120
           RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN
Sbjct: 61  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 120

Query: 121 VNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGA 180
           VNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAA+KVLKQVGA
Sbjct: 121 VNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAALKVLKQVGA 180

Query: 181 FPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERL 240
           FPDAEKAKDSH+IRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERL
Sbjct: 181 FPDAEKAKDSHSIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERL 240

Query: 241 NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLARIINS 300
           NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADL+RIINS
Sbjct: 241 NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINS 300

Query: 301 DEVQSVVKPIKKDAKRPPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD 360
           DEVQSVVKPIKK+ KR PLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD
Sbjct: 301 DEVQSVVKPIKKEVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD 360

Query: 361 KKRNLTTKNILTPVLTFFPLLYLNLQEEATAIRAAGKAWYQTMISDSDYTEFENFSKWLG 420
           KKRNLTTK                  EEAT I++AGKAWYQTMISDSDYTEFENFSKWLG
Sbjct: 361 KKRNLTTK------------------EEATTIKSAGKAWYQTMISDSDYTEFENFSKWLG 405

Query: 421 VSQ 424
           VSQ
Sbjct: 421 VSQ 405

[Close]

BLAST of CcUC04G066960.1 vs. ExPASy TrEMBL
Match: A0A6J1I983 (60S ribosomal protein L4-like OS=Cucurbita maxima OX=3661 GN=LOC111471180 PE=3 SV=1)

HSP 1 Score: 753.4 bits (1944), Expect = 5.0e-214
Identity = 395/421 (93.82%), Postives = 399/421 (94.77%), Query Frame = 0


Query: 3   AAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKRA 62
           AAARPLVSVQSLEGDMATDAAP VPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKRA
Sbjct: 4   AAARPLVSVQSLEGDMATDAAPGVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKRA 63

Query: 63  GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 122
           GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN
Sbjct: 64  GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 123

Query: 123 QKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGAFP 182
           QKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGAFP
Sbjct: 124 QKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGAFP 183

Query: 183 DAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLNL 242
           DAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLNL
Sbjct: 184 DAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLNL 243

Query: 243 LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLARIINSDE 302
           LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADL+RIINSDE
Sbjct: 244 LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINSDE 303

Query: 303 VQSVVKPIKKDAKRPPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDKK 362
           VQSVVKPIKK  KR PLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDKK
Sbjct: 304 VQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDKK 363

Query: 363 RNLTTKNILTPVLTFFPLLYLNLQEEATAIRAAGKAWYQTMISDSDYTEFENFSKWLGVS 422
           RNLTTK                  EEAT+I+AAGKAWYQTMISDSDYTEF+NFSKWLGVS
Sbjct: 364 RNLTTK------------------EEATSIKAAGKAWYQTMISDSDYTEFDNFSKWLGVS 406

Query: 423 Q 424
           Q
Sbjct: 424 Q 406

[Close]

BLAST of CcUC04G066960.1 vs. TAIR 10
Match: AT3G09630.1 (Ribosomal protein L4/L1 family )

HSP 1 Score: 669.5 bits (1726), Expect = 1.8e-192
Identity = 340/422 (80.57%), Postives = 379/422 (89.81%), Query Frame = 0


Query: 2   AAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKR 61
           AAAARPLV++Q+L+GDM+TD + TV LPDVM A +RPDIV+FVH+ IS NSRQPYAVSK+
Sbjct: 3   AAAARPLVTIQTLDGDMSTDQSSTVVLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVSKK 62

Query: 62  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV 121
           AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHR++NV
Sbjct: 63  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRVNV 122

Query: 122 NQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGAF 181
           N KR+A+VSAIAA+AVP+LV+ARGH+IE+VPE+PLVVSDSAE VEKTSAAIKVLKQ+GA+
Sbjct: 123 NMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIGAY 182

Query: 182 PDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLN 241
            DAEKAK+S  IRPGKGKMRNRRYISRKGPL+VYGTEG+K+VKAFRN+PGVE+ +VERLN
Sbjct: 183 DDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVYGTEGSKIVKAFRNLPGVELCHVERLN 242

Query: 242 LLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLARIINSD 301
           LLKLAPGGHLGRFVIWTKSAFEKL+SIYGSFEKPSEKKKGYVLPR+KMVNADLARIINSD
Sbjct: 243 LLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIINSD 302

Query: 302 EVQSVVKPIKKDAKRPPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDK 361
           E+QSVV PIKKDAKR  LKKNPLKNLN MLKLNPYAKTA+RM+LLAE QRVKAKKEKL K
Sbjct: 303 EIQSVVNPIKKDAKRAVLKKNPLKNLNVMLKLNPYAKTAKRMSLLAEAQRVKAKKEKLAK 362

Query: 362 KRNLTTKNILTPVLTFFPLLYLNLQEEATAIRAAGKAWYQTMISDSDYTEFENFSKWLGV 421
           KR   TK                  EEA AI+AAGK+WY+TMISDSDYTEF+NF+KWLG 
Sbjct: 363 KRKTVTK------------------EEALAIKAAGKSWYKTMISDSDYTEFDNFTKWLGA 406

Query: 422 SQ 424
           SQ
Sbjct: 423 SQ 406

[Close]

BLAST of CcUC04G066960.1 vs. TAIR 10
Match: AT3G09630.2 (Ribosomal protein L4/L1 family )

HSP 1 Score: 666.8 bits (1719), Expect = 1.2e-191
Identity = 339/422 (80.33%), Postives = 378/422 (89.57%), Query Frame = 0


Query: 2   AAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKR 61
           AAAARPLV++Q+L+GDM+TD + TV LPDVM A +RPDIV+FVH+ IS NSRQPYAVSK+
Sbjct: 3   AAAARPLVTIQTLDGDMSTDQSSTVVLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVSKK 62

Query: 62  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV 121
           AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHR++NV
Sbjct: 63  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRVNV 122

Query: 122 NQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGAF 181
           N KR+A+VSAIAA+AVP+LV+ARGH+IE+VPE+PLVVSDSAE VEKTSAAIKVLKQ+GA+
Sbjct: 123 NMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIGAY 182

Query: 182 PDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLN 241
            DAEKAK+S  IRPGKGKMRNRRYISRKGPL+VYGTEG+K+VKAFRN+PGVE+ +VERLN
Sbjct: 183 DDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVYGTEGSKIVKAFRNLPGVELCHVERLN 242

Query: 242 LLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLARIINSD 301
           LLKLAPGGHLGRFVIWTKSAFEKL+SIYGSFEKPSEKKKGYVLPR+KMVNADLARIINSD
Sbjct: 243 LLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIINSD 302

Query: 302 EVQSVVKPIKKDAKRPPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDK 361
           E+QSVV PIKKDAKR  LKKNPLKNLN MLKLNPYAKTA+RM+LLAE QRVKAKKEKL K
Sbjct: 303 EIQSVVNPIKKDAKRAVLKKNPLKNLNVMLKLNPYAKTAKRMSLLAEAQRVKAKKEKLAK 362

Query: 362 KRNLTTKNILTPVLTFFPLLYLNLQEEATAIRAAGKAWYQTMISDSDYTEFENFSKWLGV 421
           KR   TK                   EA AI+AAGK+WY+TMISDSDYTEF+NF+KWLG 
Sbjct: 363 KRKTVTK-------------------EALAIKAAGKSWYKTMISDSDYTEFDNFTKWLGA 405

Query: 422 SQ 424
           SQ
Sbjct: 423 SQ 405

[Close]

BLAST of CcUC04G066960.1 vs. TAIR 10
Match: AT5G02870.1 (Ribosomal protein L4/L1 family )

HSP 1 Score: 664.1 bits (1712), Expect = 7.6e-191
Identity = 338/422 (80.09%), Postives = 376/422 (89.10%), Query Frame = 0


Query: 2   AAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKR 61
           +AAARPLV+VQ L+GDM+TD + TV LPDVM A +RPDIV+FVH+ IS NSRQPYAVSK+
Sbjct: 4   SAAARPLVTVQGLDGDMSTDQSTTVTLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVSKK 63

Query: 62  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV 121
           AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHR++NV
Sbjct: 64  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRVNV 123

Query: 122 NQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGAF 181
           N KR+A+VSAIAA+AVP+LV+ARGH+IE+VPE+PLVVSDSAE VEKTSAAIKVLKQ+GA+
Sbjct: 124 NMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIGAY 183

Query: 182 PDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLN 241
            DAEKAK+S  IRPGKGKMRNRRYISRKGPL+V+GTEGAK+VKAFRN+PGVE+ +VERLN
Sbjct: 184 DDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVFGTEGAKIVKAFRNLPGVELCHVERLN 243

Query: 242 LLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLARIINSD 301
           LLKLAPGGHLGRFVIWTKSAFEKL+SIYGSFEKPSEKKKGYVLPR+KMVNADLARIINSD
Sbjct: 244 LLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIINSD 303

Query: 302 EVQSVVKPIKKDAKRPPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDK 361
           EVQSVV PIK  +KR  LKKNPLKNLN M KLNPYAKTA+RM+LLAE  RVKAKKEKL+K
Sbjct: 304 EVQSVVNPIKDGSKRAVLKKNPLKNLNVMFKLNPYAKTAKRMSLLAEASRVKAKKEKLEK 363

Query: 362 KRNLTTKNILTPVLTFFPLLYLNLQEEATAIRAAGKAWYQTMISDSDYTEFENFSKWLGV 421
           KR + TK                  EEA AI+AAGKAWYQTMISDSDYTEF+NF+KWLG 
Sbjct: 364 KRKVVTK------------------EEAQAIKAAGKAWYQTMISDSDYTEFDNFTKWLGA 407

Query: 422 SQ 424
           SQ
Sbjct: 424 SQ 407

[Close]

BLAST of CcUC04G066960.1 vs. TAIR 10
Match: AT5G02870.2 (Ribosomal protein L4/L1 family )

HSP 1 Score: 661.4 bits (1705), Expect = 4.9e-190
Identity = 337/422 (79.86%), Postives = 375/422 (88.86%), Query Frame = 0


Query: 2   AAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKR 61
           +AAARPLV+VQ L+GDM+TD + TV LPDVM A +RPDIV+FVH+ IS NSRQPYAVSK+
Sbjct: 4   SAAARPLVTVQGLDGDMSTDQSTTVTLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVSKK 63

Query: 62  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV 121
           AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHR++NV
Sbjct: 64  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRVNV 123

Query: 122 NQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGAF 181
           N KR+A+VSAIAA+AVP+LV+ARGH+IE+VPE+PLVVSDSAE VEKTSAAIKVLKQ+GA+
Sbjct: 124 NMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIGAY 183

Query: 182 PDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLN 241
            DAEKAK+S  IRPGKGKMRNRRYISRKGPL+V+GTEGAK+VKAFRN+PGVE+ +VERLN
Sbjct: 184 DDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVFGTEGAKIVKAFRNLPGVELCHVERLN 243

Query: 242 LLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLARIINSD 301
           LLKLAPGGHLGRFVIWTKSAFEKL+SIYGSFEKPSEKKKGYVLPR+KMVNADLARIINSD
Sbjct: 244 LLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIINSD 303

Query: 302 EVQSVVKPIKKDAKRPPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDK 361
           EVQSVV PIK  +KR  LKKNPLKNLN M KLNPYAKTA+RM+LLAE  RVKAKKEKL+K
Sbjct: 304 EVQSVVNPIKDGSKRAVLKKNPLKNLNVMFKLNPYAKTAKRMSLLAEASRVKAKKEKLEK 363

Query: 362 KRNLTTKNILTPVLTFFPLLYLNLQEEATAIRAAGKAWYQTMISDSDYTEFENFSKWLGV 421
           KR + TK                   EA AI+AAGKAWYQTMISDSDYTEF+NF+KWLG 
Sbjct: 364 KRKVVTK-------------------EAQAIKAAGKAWYQTMISDSDYTEFDNFTKWLGA 406

Query: 422 SQ 424
           SQ
Sbjct: 424 SQ 406

The following BLAST results are available for this feature:

BLAST of CcUC04G066960.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038882700.1	1.7e-216	94.56	60S ribosomal protein L4 [Benincasa hispida]	[more]
XP_008449286.1	6.4e-216	94.33	PREDICTED: 60S ribosomal protein L4-like [Cucumis melo] >KAA0047286.1 60S riboso...	[more]
XP_004142108.1	3.2e-215	94.09	60S ribosomal protein L4 [Cucumis sativus] >KGN54187.1 hypothetical protein Csa_...	[more]
XP_022925909.1	9.3e-215	93.38	60S ribosomal protein L4 [Cucurbita moschata] >XP_023544338.1 60S ribosomal prot...	[more]
XP_022972645.1	1.0e-213	93.82	60S ribosomal protein L4-like [Cucurbita maxima] >XP_023517997.1 60S ribosomal p...	[more]

BLAST of CcUC04G066960.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XF97	7.4e-199	85.07	60S ribosomal protein L4 OS=Prunus armeniaca OX=36596 GN=RPL4 PE=2 SV=1	[more]
Q9SF40	2.6e-191	80.57	60S ribosomal protein L4-1 OS=Arabidopsis thaliana OX=3702 GN=RPL4A PE=1 SV=1	[more]
P49691	1.1e-189	80.09	60S ribosomal protein L4-2 OS=Arabidopsis thaliana OX=3702 GN=RPL4D PE=1 SV=2	[more]
P08429	6.2e-121	61.17	60S ribosomal protein L4-A OS=Xenopus laevis OX=8355 GN=rpl4-a PE=2 SV=2	[more]
P02385	8.1e-121	60.89	60S ribosomal protein L4-B OS=Xenopus laevis OX=8355 GN=rpl4-b PE=2 SV=2	[more]

BLAST of CcUC04G066960.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TZA0	3.1e-216	94.33	60S ribosomal protein L4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A1S3BL28	3.1e-216	94.33	60S ribosomal protein L4-like OS=Cucumis melo OX=3656 GN=LOC103491208 PE=3 SV=1	[more]
A0A0A0L0Q4	1.5e-215	94.09	Ribos_L4_asso_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G29...	[more]
A0A6J1EDI0	4.5e-215	93.38	60S ribosomal protein L4 OS=Cucurbita moschata OX=3662 GN=LOC111433183 PE=3 SV=1	[more]
A0A6J1I983	5.0e-214	93.82	60S ribosomal protein L4-like OS=Cucurbita maxima OX=3661 GN=LOC111471180 PE=3 S...	[more]

BLAST of CcUC04G066960.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G09630.1	1.8e-192	80.57	Ribosomal protein L4/L1 family	[more]
AT3G09630.2	1.2e-191	80.33	Ribosomal protein L4/L1 family	[more]
AT5G02870.1	7.6e-191	80.09	Ribosomal protein L4/L1 family	[more]
AT5G02870.2	4.9e-190	79.86	Ribosomal protein L4/L1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 345..365
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..73
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..95
None	No IPR available	PANTHER	PTHR19431	60S RIBOSOMAL PROTEIN L4	coord: 2..423
None	No IPR available	PANTHER	PTHR19431:SF6	BNAC03G35890D PROTEIN	coord: 2..423
IPR002136	Ribosomal protein L4/L1e	PFAM	PF00573	Ribosomal_L4	coord: 26..266 e-value: 3.4E-40 score: 137.8
IPR023574	Ribosomal protein L4 domain superfamily	GENE3D	3.40.1370.10		coord: 3..308 e-value: 1.7E-142 score: 475.9
IPR023574	Ribosomal protein L4 domain superfamily	SUPERFAMILY	52166	Ribosomal protein L4	coord: 10..267
IPR025755	60S ribosomal protein L4, C-terminal domain	PFAM	PF14374	Ribos_L4_asso_C	coord: 280..352 e-value: 1.8E-28 score: 98.3
IPR013000	Ribosomal protein L4/L1e, eukaryotic/archaeal, conserved site	PROSITE	PS00939	RIBOSOMAL_L1E	coord: 120..146

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CcUC04G066960	CcUC04G066960	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC04G066960.1-exon	CcUC04G066960.1-exon-CicolChr04:23795713..23796886	exon
CcUC04G066960.1-exon	CcUC04G066960.1-exon-CicolChr04:23797699..23797866	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC04G066960.1-five_prime_utr	CcUC04G066960.1-five_prime_utr-CicolChr04:23795713..23795782	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC04G066960.1-cds	CcUC04G066960.1-cds-CicolChr04:23795783..23796886	CDS
CcUC04G066960.1-cds	CcUC04G066960.1-cds-CicolChr04:23797699..23797866	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CcUC04G066960.1	CcUC04G066960.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005840	ribosome
cellular_component	GO:0022625	cytosolic large ribosomal subunit
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0003723	RNA binding