CcUC03G042890.1 (mRNA) Watermelon (PI 537277) v1

Overview


Name	CcUC03G042890.1
Type	mRNA
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	ran-binding protein 1 homolog a
Location	CicolChr03: 577687 .. 581608 (-)
Sequence length	1445
RNA-Seq Expression	CcUC03G042890.1
Synteny	CcUC03G042890.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAGAAGAGCAAATAGAGAACTTTTTATGTAATTTGAGGGTTCATCTTCATTGTCACTCATTTTTTTCACTCCCACTTCACCCATATATAAACCCTAGTTTCTCCCAATTCCGATCCATTTCTTCCAATCTCACCTCACCTTCCACATTCTCAACCAAACCCTAAACCCTCTTCCATGGCGAGCAACGATACCGAACGCAGAGAAGAGGAGGAGGCTCCGGCCGGAGAGGATGAAGACACTGGAGCTCAAGTTGCCCCAATCGTCAAGTTGGAGGAGGTCACCGTCACCACCGGTGAAGAAAATGAAGACGCTATTCTCGATCTGTATGCTTTTCTCTTTACTTCTTTATCTGATCTGCTCAATCTAGGTTTTAATCTTATTTTCTTCATGTGGGTTATTCGTATTCGTTGTTTTAGGAAATCCAAACTGTACCGATTCGACAAAGATGGAAATCAGTGGAAGGAGAGGGGTGCTGGTACTGTTAAGTTTTTGAAACATAAGGAGACTGGCAAGGTTCGTCTTGTTATGAGACAGTCTAAAACCCTCAAGATCTGCGCTAACCATTTAGGTTCGTCCTCAGTTCACTACTTGTTCCTTCGCGTATATATCAAGCTTCTTTGAGTTAATGTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGTTTCTTCTTGATTTAGCTTTAGTTCTTCCCTCTTATCGTTTGATTTGTCGTGATTGTAGTACTTCCATCAATGACGGTTCAAGAACACGTTGGAAATGAGAAGTCGTGCGTGTGGCATGCCACTGACTTTGCTGATGGTGAATTGAAAGATGAGCTTTTTTGCATCAGATTCCCATCTATTGATAGTGAGTACAACTCTGAATCTTTTTTCTCTCTAAATCTTGGCTATAGATTGACTGAAAGACTCTTCTAGACTTTGGAAATATTGATATCTGGTAGTGGGCAATATTAGTGTTAAAAATGAATCTTTATATTGTTTCACGTTTTGTGTTTTCTTTTCCCCTTCGGGATAAATTATATGTGAGTGCTCTCTAGTTGTGTGGTTGTGTCCGGTTCCAAGTATCACTAGGATAATTCTTTTCATTGACAATCTAATCTTATTCGTTTTCTTGTTGTTTTGTATCTGCTTTTTATGCAGTTTGGTTTGTACAGTTTTTCATCATAAGAAATTACAGTATTGTCGTGGTATGTTTTAAGTTGAACGTTTTCCTGATGCCTATCAATACTTAGTGCTATTAGAAATTGAAGAATGGGATTTATTCTTAAAATCCATTGTATAGTTTTCATCCGTACATAATGGTAACTTTGTCCTTGACACTTCTACTTCTCTGCTTATTTTTACTGATTATTGACTCTATCCATGAATATATTTCTTTTTACTTTCATTTACATTTGTTTTCTCTACTAAAAAAATAGGAAGTTTACTATTCCTAGATCCATCTCTGTTAATCTGCACAGTTTCTTCAGCTATCTAATTCTCTACATGTTCACATTGTATGCCAGTTGTTTTGGCAATGGAAGAGTTGGAGTCTGTTCCTGAATGGCAGAAGTATTATATAGAGTTGCAATTCTATATAATGATAATTCGATAATAAAATTTGATAGGAAAAAGTAGGTGAAAGTTGAGTGGTTTCTTTGGTGAATAGTCGGTTGTAAGCTTACTTCAGAGGATTTTAATTGATGATACCTAGAAGAAAAAAGCTGAAAGACAGTAATGGTACGAATGGAAATTTCCCAGTTAACAATTATCTGTGGCTGCTGTTGCCCTTTGAGGTGTGTAATTGGTACATCGGATATGTTCTGGGTTTTCATCCTTAAATGCAGTGGACCTCTCTGCACGGGATACATCAAAACTGTTCGATGTAGCTTAGGTGTTGTAATTTTATTTAGAACTCCCTCTCCATGCATCACAAGCTTTCAATGATGTCTCCGATGACTATTAGTCCAAATTTGTCTAGGAATTAGGTTCTTTATCATTGTAACTCTCAATAAGGTAGATAAACCTGGATAAATAGACGTCATCCAACAGAGTGATCCAGTTCTTTCCCTTTCTTAGGGGTGGTGAGTGATGAAGCCTTTTGAATTAATTTAAGCATCATCTCTGCCAGGGCTTCATATCTTTGTGTCAGCTAGGAACTCAATCTATGACTTCTAACTCAAGTCATGGGTATTGCAGAAATCTTTTATTTGTTTGTGTTTTTGTTGTTACTAAATTATCAATCTAACAACATAGGATGTTGGATTAGTTTCTTCATACTATAGACTGCAAAACCCTCATGGAAACATTCCTAGAAGTCCTCTAGTCCCAAAAGATAGATAGTTTCTTTTGAACTGTGCTAATCAGGTTTTTTTGGGATGTCTTAGAAAATAAAAAAATTGCTGAAAATAATTACAAATATAGCAAAATTTTACTTTCTATCCATGATAGACCGCGATAGACTCAGATAAACATCTATTGCTTTACCAGATAGACACGAATAGATGTCTATTTGGGTCTATCGCGGTCTATCACAGATAGAAAGTGAAATTTTGCTATATTTGTAAATAGTTTGATATTTTTTCTATTTATAATAATTTTCCTTTTTTTCCATTGGTTATTTACTTGATCATTATTAATTCTTTTTTGGGTATTATTAGATTGCAAGACCTTCATGGAAACATTCCAAGAAGTTGCGGAGTCCCAAAAGAAGAAAGAGGAAAATAAAGATGCATCAGGAGCAGCTGGTCTACTTGAAAAGTTGAGCGTTGAAGACGAAAAGAAAGCCGAAGATAAAGCTGAGGACACACCTGCAAAACCTAAGGAAGAGGATAAGCCTGAGGGTGAGGCAGGGAAATCAGATGCAGAGAAGAAAGACTAGGAGCAGAGCCTGTTTCCCCTGCCAGATATATACGGTAGGATTTAGCTCTACCTCTACCGGATACGTCTCATTCATCCATGTCTTGGTACATTAAAACACAGTCAATTCTTGGATTGGGTAACTTTTCTGGGCTGGAAAGTTAAGAGTTGTCTAAATTGTATGTTCGTTGGTCGGTCGGTTGGGGAGTCGTTTTCTATTGTTCTCCTTCCTTTCCTTTCAAAATGAGATTGATTTGTAGTCTGTCAAATGGTTGGTAGTGTGGTGATGGCCGTTTGTGAATCCTCAGAGTCAAATAGCATTTTTAGAAACCATAAAGTTTGTTTGCAGGGAGGGCCTGAGCTGAAGATGCTGCAGAGGGTGGGTTGGGTTAGTACCCAAACAAGAATATTTGCAGAGACATATATACTTCTTTTTGCTTCTTTTTTCTTGAGGAAAACATGGTTGGTTGTCTTGTGGTCATATTTTATTATTTAAGTTCTAGCTCTATTCTATTGTGGAGTGTGCTTTCTCTTTTGGACTGCTTTCTATTTACCTCTGTTTTCTGGATATGGTTTGTAGTTTTGTATTTTGGATTGCTTCTTTCAGGGAGGCCATTGGTGTCTCTTTTTTTTTCTTGGGCGAG

mRNA sequence

AAAGAAGAGCAAATAGAGAACTTTTTATGTAATTTGAGGGTTCATCTTCATTGTCACTCATTTTTTTCACTCCCACTTCACCCATATATAAACCCTAGTTTCTCCCAATTCCGATCCATTTCTTCCAATCTCACCTCACCTTCCACATTCTCAACCAAACCCTAAACCCTCTTCCATGGCGAGCAACGATACCGAACGCAGAGAAGAGGAGGAGGCTCCGGCCGGAGAGGATGAAGACACTGGAGCTCAAGTTGCCCCAATCGTCAAGTTGGAGGAGGTCACCGTCACCACCGGTGAAGAAAATGAAGACGCTATTCTCGATCTGAAATCCAAACTGTACCGATTCGACAAAGATGGAAATCAGTGGAAGGAGAGGGGTGCTGGTACTGTTAAGTTTTTGAAACATAAGGAGACTGGCAAGGTTCGTCTTGTTATGAGACAGTCTAAAACCCTCAAGATCTGCGCTAACCATTTAGTACTTCCATCAATGACGGTTCAAGAACACGTTGGAAATGAGAAGTCGTGCGTGTGGCATGCCACTGACTTTGCTGATGGTGAATTGAAAGATGAGCTTTTTTGCATCAGATTCCCATCTATTGATAATTGCAAGACCTTCATGGAAACATTCCAAGAAGTTGCGGAGTCCCAAAAGAAGAAAGAGGAAAATAAAGATGCATCAGGAGCAGCTGGTCTACTTGAAAAGTTGAGCGTTGAAGACGAAAAGAAAGCCGAAGATAAAGCTGAGGACACACCTGCAAAACCTAAGGAAGAGGATAAGCCTGAGGGTGAGGCAGGGAAATCAGATGCAGAGAAGAAAGACTAGGAGCAGAGCCTGTTTCCCCTGCCAGATATATACGGTAGGATTTAGCTCTACCTCTACCGGATACGTCTCATTCATCCATGTCTTGGTACATTAAAACACAGTCAATTCTTGGATTGGGTAACTTTTCTGGGCTGGAAAGTTAAGAGTTGTCTAAATTGTATGTTCGTTGGTCGGTCGGTTGGGGAGTCGTTTTCTATTGTTCTCCTTCCTTTCCTTTCAAAATGAGATTGATTTGTAGTCTGTCAAATGGTTGGTAGTGTGGTGATGGCCGTTTGTGAATCCTCAGAGTCAAATAGCATTTTTAGAAACCATAAAGTTTGTTTGCAGGGAGGGCCTGAGCTGAAGATGCTGCAGAGGGTGGGTTGGGTTAGTACCCAAACAAGAATATTTGCAGAGACATATATACTTCTTTTTGCTTCTTTTTTCTTGAGGAAAACATGGTTGGTTGTCTTGTGGTCATATTTTATTATTTAAGTTCTAGCTCTATTCTATTGTGGAGTGTGCTTTCTCTTTTGGACTGCTTTCTATTTACCTCTGTTTTCTGGATATGGTTTGTAGTTTTGTATTTTGGATTGCTTCTTTCAGGGAGGCCATTGGTGTCTCTTTTTTTTTCTTGGGCGAG

Coding sequence (CDS)

ATGGCGAGCAACGATACCGAACGCAGAGAAGAGGAGGAGGCTCCGGCCGGAGAGGATGAAGACACTGGAGCTCAAGTTGCCCCAATCGTCAAGTTGGAGGAGGTCACCGTCACCACCGGTGAAGAAAATGAAGACGCTATTCTCGATCTGAAATCCAAACTGTACCGATTCGACAAAGATGGAAATCAGTGGAAGGAGAGGGGTGCTGGTACTGTTAAGTTTTTGAAACATAAGGAGACTGGCAAGGTTCGTCTTGTTATGAGACAGTCTAAAACCCTCAAGATCTGCGCTAACCATTTAGTACTTCCATCAATGACGGTTCAAGAACACGTTGGAAATGAGAAGTCGTGCGTGTGGCATGCCACTGACTTTGCTGATGGTGAATTGAAAGATGAGCTTTTTTGCATCAGATTCCCATCTATTGATAATTGCAAGACCTTCATGGAAACATTCCAAGAAGTTGCGGAGTCCCAAAAGAAGAAAGAGGAAAATAAAGATGCATCAGGAGCAGCTGGTCTACTTGAAAAGTTGAGCGTTGAAGACGAAAAGAAAGCCGAAGATAAAGCTGAGGACACACCTGCAAAACCTAAGGAAGAGGATAAGCCTGAGGGTGAGGCAGGGAAATCAGATGCAGAGAAGAAAGACTAG

Protein sequence

MASNDTERREEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDLKSKLYRFDKDGNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWHATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKEENKDASGAAGLLEKLSVEDEKKAEDKAEDTPAKPKEEDKPEGEAGKSDAEKKD

Homology

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BLAST of CcUC03G042890.1 vs. NCBI nr
Match: XP_008457357.1 (PREDICTED: ran-binding protein 1 homolog a [Cucumis melo] >XP_011658664.2 ran-binding protein 1 homolog a [Cucumis sativus] >KAA0060033.1 ran-binding protein 1-like protein a-like [Cucumis melo var. makuwa] >KGN65824.1 hypothetical protein Csa_023197 [Cucumis sativus] >TYJ97290.1 ran-binding protein 1-like protein a-like [Cucumis melo var. makuwa])

HSP 1 Score: 384.4 bits (986), Expect = 6.4e-103
Identity = 205/219 (93.61%), Postives = 208/219 (94.98%), Query Frame = 0


Query: 1   MASNDTERREEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDLKSKLYRFDKD 60
           MAS+DTERREEEEAPA EDEDTGAQVAPIVKLE V VTTGEE+EDAILDLKSKLYRFDKD
Sbjct: 1   MASSDTERREEEEAPAAEDEDTGAQVAPIVKLEAVNVTTGEEDEDAILDLKSKLYRFDKD 60

Query: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 120
           GNQWKERGAGTVKFLKHKETG+VRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKETGRVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 120

Query: 121 ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKEENKDASGAAGLLEKLSVE 180
           ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKK ENKDAS AAGLLEKLSVE
Sbjct: 121 ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKVENKDASAAAGLLEKLSVE 180

Query: 181 DEKKA----EDKAEDTPAKPKEEDKPEGEAGKSDAEKKD 216
           DEKKA    EDKAEDTP K KEEDKPEGEAGKSDAEKKD
Sbjct: 181 DEKKAEDKSEDKAEDTPVKSKEEDKPEGEAGKSDAEKKD 219

[Close]

BLAST of CcUC03G042890.1 vs. NCBI nr
Match: XP_038894876.1 (ran-binding protein 1 homolog a [Benincasa hispida])

HSP 1 Score: 382.5 bits (981), Expect = 2.4e-102
Identity = 205/216 (94.91%), Postives = 208/216 (96.30%), Query Frame = 0


Query: 1   MASNDTERREEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDLKSKLYRFDKD 60
           MAS DTERREEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDLKSKLYRFDKD
Sbjct: 1   MASTDTERREEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDLKSKLYRFDKD 60

Query: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 120
           GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 120

Query: 121 ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKEENKDASGAAGLLEKLSVE 180
           ATDFADGELKDELFCIRFPSI+NCKTFMETFQEVAESQKKKEENKDAS AAGLLEKLSVE
Sbjct: 121 ATDFADGELKDELFCIRFPSIENCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSVE 180

Query: 181 DEKKAEDKAED-TPAKPKEEDKPEGEAGKSDAEKKD 216
           D  K+EDKAED TP K KEEDKPEGEA KSDAEKK+
Sbjct: 181 D--KSEDKAEDTTPVKSKEEDKPEGEAKKSDAEKKE 214

[Close]

BLAST of CcUC03G042890.1 vs. NCBI nr
Match: XP_023519267.1 (ran-binding protein 1 homolog a-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 378.6 bits (971), Expect = 3.5e-101
Identity = 201/218 (92.20%), Postives = 208/218 (95.41%), Query Frame = 0


Query: 1   MASNDTERREEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDLKSKLYRFDKD 60
           MAS DTERREEEEAPA EDEDTGAQVAPIVKLEEV VTTGEENEDAILDLKSKLYRFDKD
Sbjct: 1   MASADTERREEEEAPAAEDEDTGAQVAPIVKLEEVAVTTGEENEDAILDLKSKLYRFDKD 60

Query: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 120
           GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSM+VQEHVGN+KSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHVGNDKSCVWH 120

Query: 121 ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKEENKDASGAAGLLEKLSVE 180
           ATDFADGELKDELFCIRFPSI+NCKTFMETFQEVAESQKKKEENKDAS AAGLLEKLSVE
Sbjct: 121 ATDFADGELKDELFCIRFPSIENCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSVE 180

Query: 181 DEK---KAEDKAEDTPAKPKEEDKPEGEAGKSDAEKKD 216
           DEK   K+EDKAEDTP K +E+DKPEGEA KSDAEKK+
Sbjct: 181 DEKAEDKSEDKAEDTPVKSEEKDKPEGEAEKSDAEKKE 218

[Close]

BLAST of CcUC03G042890.1 vs. NCBI nr
Match: KAG6583353.1 (Ran-binding protein 1-like c, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019122.1 Ran-binding protein 1-like c [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 377.5 bits (968), Expect = 7.8e-101
Identity = 201/218 (92.20%), Postives = 207/218 (94.95%), Query Frame = 0


Query: 1   MASNDTERREEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDLKSKLYRFDKD 60
           MAS DTERREEEEAPA EDEDTGAQVAPIVKLEEV VTTGEENEDAILDLKSKLYRFDKD
Sbjct: 1   MASADTERREEEEAPAAEDEDTGAQVAPIVKLEEVAVTTGEENEDAILDLKSKLYRFDKD 60

Query: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 120
           GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSM+VQEHVGN+KSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHVGNDKSCVWH 120

Query: 121 ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKEENKDASGAAGLLEKLSVE 180
           ATDFADGELKDELFCIRFPSI+NCKTFMETFQEVAESQKKKEENKDAS AAGLLEKLSVE
Sbjct: 121 ATDFADGELKDELFCIRFPSIENCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSVE 180

Query: 181 DEK---KAEDKAEDTPAKPKEEDKPEGEAGKSDAEKKD 216
           DEK   KAEDKAED P K +E+DKPEGEA KSDAEKK+
Sbjct: 181 DEKKAEKAEDKAEDPPVKSEEKDKPEGEAEKSDAEKKE 218

[Close]

BLAST of CcUC03G042890.1 vs. NCBI nr
Match: XP_022970593.1 (ran-binding protein 1 homolog a-like [Cucurbita maxima])

HSP 1 Score: 377.1 bits (967), Expect = 1.0e-100
Identity = 201/218 (92.20%), Postives = 207/218 (94.95%), Query Frame = 0


Query: 1   MASNDTERREEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDLKSKLYRFDKD 60
           MAS DTERREEEEAPA EDEDTGAQVAPIVKLEEV VTTGEENEDAILDLKSKLYRFDKD
Sbjct: 1   MASADTERREEEEAPAAEDEDTGAQVAPIVKLEEVAVTTGEENEDAILDLKSKLYRFDKD 60

Query: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 120
           GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSM+VQEHVGN+KSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHVGNDKSCVWH 120

Query: 121 ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKEENKDASGAAGLLEKLSVE 180
           ATDFADGELKDELFCIRFPSI+NCKTFMETFQEVAESQKKKEENKDAS AAGLLEKLSVE
Sbjct: 121 ATDFADGELKDELFCIRFPSIENCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSVE 180

Query: 181 DEK---KAEDKAEDTPAKPKEEDKPEGEAGKSDAEKKD 216
           DEK   KAEDKAE TP K +E+DKPEGEA KSDAEKK+
Sbjct: 181 DEKKAEKAEDKAEFTPVKSEEKDKPEGEAAKSDAEKKE 218

[Close]

BLAST of CcUC03G042890.1 vs. ExPASy Swiss-Prot
Match: Q9LMK7 (Ran-binding protein 1 homolog a OS=Arabidopsis thaliana OX=3702 GN=RANBP1A PE=1 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 5.1e-79
Identity = 163/220 (74.09%), Postives = 185/220 (84.09%), Query Frame = 0


Query: 1   MASNDT--ERREEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDLKSKLYRFD 60
           MA+N+   E R+EEEA A EDEDTGAQVAPIV+LEEV VTTGEE+EDA+LDLKSKLYRFD
Sbjct: 1   MATNEPEHEHRDEEEAGANEDEDTGAQVAPIVRLEEVAVTTGEEDEDAVLDLKSKLYRFD 60

Query: 61  KDGNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCV 120
           KD NQWKERGAGTVKFLKHK TGK+RLVMRQSKTLKICANH V   M+VQEHVGNEKSCV
Sbjct: 61  KDANQWKERGAGTVKFLKHKNTGKIRLVMRQSKTLKICANHFVKSGMSVQEHVGNEKSCV 120

Query: 121 WHATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKEENKDASGAAGLLEKLS 180
           WHA DFADGELKDELFCIRF SI+NCKTFM+ F+EVAES+++KEE+KDA+  AGLLEKL+
Sbjct: 121 WHARDFADGELKDELFCIRFASIENCKTFMQKFKEVAESEEEKEESKDAADTAGLLEKLT 180

Query: 181 VED---EKKAEDKAEDT-PAKPKEEDKPEGEAGKSDAEKK 215
           VE+   E+K E KA +T   + K E+K E EA KS   KK
Sbjct: 181 VEETKTEEKTEAKAVETAKTEVKAEEKKESEAEKSGEAKK 220

[Close]

BLAST of CcUC03G042890.1 vs. ExPASy Swiss-Prot
Match: Q8RWG8 (Ran-binding protein 1 homolog b OS=Arabidopsis thaliana OX=3702 GN=RANBP1B PE=1 SV=2)

HSP 1 Score: 280.4 bits (716), Expect = 1.7e-74
Identity = 150/209 (71.77%), Postives = 175/209 (83.73%), Query Frame = 0


Query: 3   SNDTER--REEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDLKSKLYRFDKD 62
           SN+ ER  R+EEE  A EDEDTGAQVAPIV+LEEV VTTGEE+ED ILDLKSKLYRFDKD
Sbjct: 5   SNEPERENRDEEETGANEDEDTGAQVAPIVRLEEVAVTTGEEDEDTILDLKSKLYRFDKD 64

Query: 63  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 122
           G+QWKERGAGTVKFLKH+ +GK+RLVMRQSKTLKICANHLV   M+VQEH GN+KSCVWH
Sbjct: 65  GSQWKERGAGTVKFLKHRVSGKIRLVMRQSKTLKICANHLVGSGMSVQEHAGNDKSCVWH 124

Query: 123 ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKEENKDASGAAGLLEKLSVE 182
           A DF+DGELKDELFCIRF S++NCK FM+ F+EVAES+++KEE+KDAS  AGLLEKL+VE
Sbjct: 125 ARDFSDGELKDELFCIRFASVENCKAFMQKFKEVAESEEEKEESKDASDTAGLLEKLTVE 184

Query: 183 D---EKKAEDKAEDTPAKPKEEDKPEGEA 207
           +   EKK  +KAE+       E+K   E+
Sbjct: 185 EKESEKKPVEKAEENKKSEAVEEKKTEES 213

[Close]

BLAST of CcUC03G042890.1 vs. ExPASy Swiss-Prot
Match: P92985 (Ran-binding protein 1 homolog c OS=Arabidopsis thaliana OX=3702 GN=RANBP1C PE=2 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 3.2e-73
Identity = 152/218 (69.72%), Postives = 175/218 (80.28%), Query Frame = 0


Query: 1   MASNDTER-REEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDLKSKLYRFDK 60
           MAS + ER   E+E    EDEDTGAQVAPIV+LEEV VTTGEE+EDA+LDLKSK+YRFDK
Sbjct: 1   MASTEPERENREDETEVNEDEDTGAQVAPIVRLEEVAVTTGEEDEDAVLDLKSKMYRFDK 60

Query: 61  DGNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVW 120
           +GNQWKERGAGTVK LKHKETGKVRLVMRQSKTLKICANHL+   M+VQEH GNEKSC+W
Sbjct: 61  EGNQWKERGAGTVKLLKHKETGKVRLVMRQSKTLKICANHLISSGMSVQEHSGNEKSCLW 120

Query: 121 HATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKEENKDASGAAGLLEKLSV 180
           HATDF+DGELKDELFCIRF SI+NCKTFME F E+AESQ+  +E+     AAGL+E LSV
Sbjct: 121 HATDFSDGELKDELFCIRFASIENCKTFMEKFTEIAESQQVGKESTQGDEAAGLIENLSV 180

Query: 181 ED---EKKAEDKAEDTPAKPKEEDKPEGEAGKSDAEKK 215
           E+   E+KA++  E  PAK  +E K E    K + EKK
Sbjct: 181 EENISEEKAKEAEEKEPAKEDKETKKE----KVEEEKK 214

[Close]

BLAST of CcUC03G042890.1 vs. ExPASy Swiss-Prot
Match: Q09717 (Ran-specific GTPase-activating protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=sbp1 PE=1 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.2e-30
Identity = 71/160 (44.38%), Postives = 96/160 (60.00%), Query Frame = 0


Query: 2   ASNDTERREEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDLKSKLYRFDKDG 61
           AS + E++  E     E         PIVKL  V   T EE E     +++KL+RFDK  
Sbjct: 51  ASTNDEKKPAEGDEDAEPASPEVHFEPIVKLSAVETKTNEEEETVEFKMRAKLFRFDKAA 110

Query: 62  NQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH- 121
           ++WKERG G  + LKHKETGK RLVMR+ KTLK+CANHL++P M +  +VG+++S VW  
Sbjct: 111 SEWKERGTGDARLLKHKETGKTRLVMRRDKTLKVCANHLLMPEMKLTPNVGSDRSWVWTV 170

Query: 122 ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKK 161
           A D ++GE   E F IRF + +N   F E F++  E   K
Sbjct: 171 AADVSEGEPTAETFAIRFANSENANLFKENFEKYQEENAK 210

[Close]

BLAST of CcUC03G042890.1 vs. ExPASy Swiss-Prot
Match: P41920 (Ran-specific GTPase-activating protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=YRB1 PE=1 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.2e-30
Identity = 72/159 (45.28%), Postives = 103/159 (64.78%), Query Frame = 0


Query: 5   DTERREEEEAPAGED--EDTGAQVAPIVKLEEVTVTTGEENEDAILDLKSKLYRFDKDGN 64
           D E  +EE    G+D  E       P+V LE+V V T EE+E+ +  +++KL+RFD D  
Sbjct: 42  DEEDTKEETKKEGDDAPESPDIHFEPVVHLEKVDVKTMEEDEEVLYKVRAKLFRFDADAK 101

Query: 65  QWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWHAT 124
           +WKERG G  KFLK+K+T KVR++MR+ KTLKICANH++ P  T++ +VG+++S V+  T
Sbjct: 102 EWKERGTGDCKFLKNKKTNKVRILMRRDKTLKICANHIIAPEYTLKPNVGSDRSWVYACT 161

Query: 125 -DFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKK 161
            D A+GE +   F IRF S +N   F E F++  E  KK
Sbjct: 162 ADIAEGEAEAFTFAIRFGSKENADKFKEEFEKAQEINKK 200

[Close]

BLAST of CcUC03G042890.1 vs. ExPASy TrEMBL
Match: A0A5A7UVN5 (Ran-binding protein 1-like protein a-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G00850 PE=4 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 3.1e-103
Identity = 205/219 (93.61%), Postives = 208/219 (94.98%), Query Frame = 0


Query: 1   MASNDTERREEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDLKSKLYRFDKD 60
           MAS+DTERREEEEAPA EDEDTGAQVAPIVKLE V VTTGEE+EDAILDLKSKLYRFDKD
Sbjct: 1   MASSDTERREEEEAPAAEDEDTGAQVAPIVKLEAVNVTTGEEDEDAILDLKSKLYRFDKD 60

Query: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 120
           GNQWKERGAGTVKFLKHKETG+VRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKETGRVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 120

Query: 121 ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKEENKDASGAAGLLEKLSVE 180
           ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKK ENKDAS AAGLLEKLSVE
Sbjct: 121 ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKVENKDASAAAGLLEKLSVE 180

Query: 181 DEKKA----EDKAEDTPAKPKEEDKPEGEAGKSDAEKKD 216
           DEKKA    EDKAEDTP K KEEDKPEGEAGKSDAEKKD
Sbjct: 181 DEKKAEDKSEDKAEDTPVKSKEEDKPEGEAGKSDAEKKD 219

[Close]

BLAST of CcUC03G042890.1 vs. ExPASy TrEMBL
Match: A0A0A0LXN6 (RanBD1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G532320 PE=4 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 3.1e-103
Identity = 205/219 (93.61%), Postives = 208/219 (94.98%), Query Frame = 0


Query: 1   MASNDTERREEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDLKSKLYRFDKD 60
           MAS+DTERREEEEAPA EDEDTGAQVAPIVKLE V VTTGEE+EDAILDLKSKLYRFDKD
Sbjct: 1   MASSDTERREEEEAPAAEDEDTGAQVAPIVKLEAVNVTTGEEDEDAILDLKSKLYRFDKD 60

Query: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 120
           GNQWKERGAGTVKFLKHKETG+VRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKETGRVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 120

Query: 121 ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKEENKDASGAAGLLEKLSVE 180
           ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKK ENKDAS AAGLLEKLSVE
Sbjct: 121 ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKVENKDASAAAGLLEKLSVE 180

Query: 181 DEKKA----EDKAEDTPAKPKEEDKPEGEAGKSDAEKKD 216
           DEKKA    EDKAEDTP K KEEDKPEGEAGKSDAEKKD
Sbjct: 181 DEKKAEDKSEDKAEDTPVKSKEEDKPEGEAGKSDAEKKD 219

[Close]

BLAST of CcUC03G042890.1 vs. ExPASy TrEMBL
Match: A0A1S3C5A9 (ran-binding protein 1 homolog a OS=Cucumis melo OX=3656 GN=LOC103497065 PE=4 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 3.1e-103
Identity = 205/219 (93.61%), Postives = 208/219 (94.98%), Query Frame = 0


Query: 1   MASNDTERREEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDLKSKLYRFDKD 60
           MAS+DTERREEEEAPA EDEDTGAQVAPIVKLE V VTTGEE+EDAILDLKSKLYRFDKD
Sbjct: 1   MASSDTERREEEEAPAAEDEDTGAQVAPIVKLEAVNVTTGEEDEDAILDLKSKLYRFDKD 60

Query: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 120
           GNQWKERGAGTVKFLKHKETG+VRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKETGRVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 120

Query: 121 ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKEENKDASGAAGLLEKLSVE 180
           ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKK ENKDAS AAGLLEKLSVE
Sbjct: 121 ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKVENKDASAAAGLLEKLSVE 180

Query: 181 DEKKA----EDKAEDTPAKPKEEDKPEGEAGKSDAEKKD 216
           DEKKA    EDKAEDTP K KEEDKPEGEAGKSDAEKKD
Sbjct: 181 DEKKAEDKSEDKAEDTPVKSKEEDKPEGEAGKSDAEKKD 219

[Close]

BLAST of CcUC03G042890.1 vs. ExPASy TrEMBL
Match: A0A6J1I4C6 (ran-binding protein 1 homolog a-like OS=Cucurbita maxima OX=3661 GN=LOC111469534 PE=4 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 4.9e-101
Identity = 201/218 (92.20%), Postives = 207/218 (94.95%), Query Frame = 0


Query: 1   MASNDTERREEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDLKSKLYRFDKD 60
           MAS DTERREEEEAPA EDEDTGAQVAPIVKLEEV VTTGEENEDAILDLKSKLYRFDKD
Sbjct: 1   MASADTERREEEEAPAAEDEDTGAQVAPIVKLEEVAVTTGEENEDAILDLKSKLYRFDKD 60

Query: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 120
           GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSM+VQEHVGN+KSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHVGNDKSCVWH 120

Query: 121 ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKEENKDASGAAGLLEKLSVE 180
           ATDFADGELKDELFCIRFPSI+NCKTFMETFQEVAESQKKKEENKDAS AAGLLEKLSVE
Sbjct: 121 ATDFADGELKDELFCIRFPSIENCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSVE 180

Query: 181 DEK---KAEDKAEDTPAKPKEEDKPEGEAGKSDAEKKD 216
           DEK   KAEDKAE TP K +E+DKPEGEA KSDAEKK+
Sbjct: 181 DEKKAEKAEDKAEFTPVKSEEKDKPEGEAAKSDAEKKE 218

[Close]

BLAST of CcUC03G042890.1 vs. ExPASy TrEMBL
Match: A0A6J1HKC3 (ran-binding protein 1 homolog a-like OS=Cucurbita moschata OX=3662 GN=LOC111464892 PE=4 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 3.2e-100
Identity = 200/222 (90.09%), Postives = 207/222 (93.24%), Query Frame = 0


Query: 1   MASNDTERREEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDLKSKLYRFDKD 60
           MAS DTERREEEEAPA EDEDTGAQVAPIVKLEEV VTTGEENEDAILDLKSKLYRFDKD
Sbjct: 1   MASADTERREEEEAPAAEDEDTGAQVAPIVKLEEVAVTTGEENEDAILDLKSKLYRFDKD 60

Query: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 120
           GNQWKERGAGTVKFLKH+ETGKVRLVMRQSKTLKICANHLVLPSM+VQEHVGN+KSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHRETGKVRLVMRQSKTLKICANHLVLPSMSVQEHVGNDKSCVWH 120

Query: 121 ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKEENKDASGAAGLLEKLSVE 180
           ATDFADGELKDELFCIRFPSI+NCKTFMETFQEVAESQKKKEENKDAS AAGLLEKLSVE
Sbjct: 121 ATDFADGELKDELFCIRFPSIENCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSVE 180

Query: 181 DEKKA-------EDKAEDTPAKPKEEDKPEGEAGKSDAEKKD 216
           DEKKA       EDKAEDTP K +E+ KPEGEA KSDAEKK+
Sbjct: 181 DEKKAEKAEDKSEDKAEDTPVKSEEKGKPEGEAEKSDAEKKE 222

[Close]

BLAST of CcUC03G042890.1 vs. TAIR 10
Match: AT1G07140.1 (Pleckstrin homology (PH) domain superfamily protein )

HSP 1 Score: 295.4 bits (755), Expect = 3.6e-80
Identity = 163/220 (74.09%), Postives = 185/220 (84.09%), Query Frame = 0


Query: 1   MASNDT--ERREEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDLKSKLYRFD 60
           MA+N+   E R+EEEA A EDEDTGAQVAPIV+LEEV VTTGEE+EDA+LDLKSKLYRFD
Sbjct: 1   MATNEPEHEHRDEEEAGANEDEDTGAQVAPIVRLEEVAVTTGEEDEDAVLDLKSKLYRFD 60

Query: 61  KDGNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCV 120
           KD NQWKERGAGTVKFLKHK TGK+RLVMRQSKTLKICANH V   M+VQEHVGNEKSCV
Sbjct: 61  KDANQWKERGAGTVKFLKHKNTGKIRLVMRQSKTLKICANHFVKSGMSVQEHVGNEKSCV 120

Query: 121 WHATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKEENKDASGAAGLLEKLS 180
           WHA DFADGELKDELFCIRF SI+NCKTFM+ F+EVAES+++KEE+KDA+  AGLLEKL+
Sbjct: 121 WHARDFADGELKDELFCIRFASIENCKTFMQKFKEVAESEEEKEESKDAADTAGLLEKLT 180

Query: 181 VED---EKKAEDKAEDT-PAKPKEEDKPEGEAGKSDAEKK 215
           VE+   E+K E KA +T   + K E+K E EA KS   KK
Sbjct: 181 VEETKTEEKTEAKAVETAKTEVKAEEKKESEAEKSGEAKK 220

[Close]

BLAST of CcUC03G042890.1 vs. TAIR 10
Match: AT2G30060.1 (Pleckstrin homology (PH) domain superfamily protein )

HSP 1 Score: 280.4 bits (716), Expect = 1.2e-75
Identity = 150/209 (71.77%), Postives = 175/209 (83.73%), Query Frame = 0


Query: 3   SNDTER--REEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDLKSKLYRFDKD 62
           SN+ ER  R+EEE  A EDEDTGAQVAPIV+LEEV VTTGEE+ED ILDLKSKLYRFDKD
Sbjct: 5   SNEPERENRDEEETGANEDEDTGAQVAPIVRLEEVAVTTGEEDEDTILDLKSKLYRFDKD 64

Query: 63  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 122
           G+QWKERGAGTVKFLKH+ +GK+RLVMRQSKTLKICANHLV   M+VQEH GN+KSCVWH
Sbjct: 65  GSQWKERGAGTVKFLKHRVSGKIRLVMRQSKTLKICANHLVGSGMSVQEHAGNDKSCVWH 124

Query: 123 ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKEENKDASGAAGLLEKLSVE 182
           A DF+DGELKDELFCIRF S++NCK FM+ F+EVAES+++KEE+KDAS  AGLLEKL+VE
Sbjct: 125 ARDFSDGELKDELFCIRFASVENCKAFMQKFKEVAESEEEKEESKDASDTAGLLEKLTVE 184

Query: 183 D---EKKAEDKAEDTPAKPKEEDKPEGEA 207
           +   EKK  +KAE+       E+K   E+
Sbjct: 185 EKESEKKPVEKAEENKKSEAVEEKKTEES 213

[Close]

BLAST of CcUC03G042890.1 vs. TAIR 10
Match: AT5G58590.1 (RAN binding protein 1 )

HSP 1 Score: 276.2 bits (705), Expect = 2.3e-74
Identity = 152/218 (69.72%), Postives = 175/218 (80.28%), Query Frame = 0


Query: 1   MASNDTER-REEEEAPAGEDEDTGAQVAPIVKLEEVTVTTGEENEDAILDLKSKLYRFDK 60
           MAS + ER   E+E    EDEDTGAQVAPIV+LEEV VTTGEE+EDA+LDLKSK+YRFDK
Sbjct: 1   MASTEPERENREDETEVNEDEDTGAQVAPIVRLEEVAVTTGEEDEDAVLDLKSKMYRFDK 60

Query: 61  DGNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVW 120
           +GNQWKERGAGTVK LKHKETGKVRLVMRQSKTLKICANHL+   M+VQEH GNEKSC+W
Sbjct: 61  EGNQWKERGAGTVKLLKHKETGKVRLVMRQSKTLKICANHLISSGMSVQEHSGNEKSCLW 120

Query: 121 HATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKEENKDASGAAGLLEKLSV 180
           HATDF+DGELKDELFCIRF SI+NCKTFME F E+AESQ+  +E+     AAGL+E LSV
Sbjct: 121 HATDFSDGELKDELFCIRFASIENCKTFMEKFTEIAESQQVGKESTQGDEAAGLIENLSV 180

Query: 181 ED---EKKAEDKAEDTPAKPKEEDKPEGEAGKSDAEKK 215
           E+   E+KA++  E  PAK  +E K E    K + EKK
Sbjct: 181 EENISEEKAKEAEEKEPAKEDKETKKE----KVEEEKK 214

[Close]

BLAST of CcUC03G042890.1 vs. TAIR 10
Match: AT3G15970.1 (NUP50 (Nucleoporin 50 kDa) protein )

HSP 1 Score: 48.5 bits (114), Expect = 7.7e-06
Identity = 49/158 (31.01%), Postives = 73/158 (46.20%), Query Frame = 0


Query: 33  EEVTVTTGEENEDAILDLKSKLYRFDKDGNQWKERGAGTVKF-LKHKETGKVRLVMRQSK 92
           ++V+V TGEENE A     S ++ + + G  WKERG G +K  +   E  K RLVMR   
Sbjct: 320 QDVSVETGEENEKAAFTADSVMFEYLEGG--WKERGKGELKVNISTTENRKARLVMRSKG 379

Query: 93  TLKICANHLVLPSMTV--QEHVGNEKSCVWHATDFADGELKDELFCIRFPSIDNCKTFME 152
             ++  N  + P M +   +  G   +CV   +D  DG        ++F       T +E
Sbjct: 380 NYRLTLNASLYPEMKLAKMDKKGITFACVNSVSDAKDGL---STLALKFKD----PTVVE 439

Query: 153 TFQEVAESQKKKEENKDASGAAGLLEKLSVEDEKKAED 188
            F+ V E  K  + +  A  AA L    + E+   AED
Sbjct: 440 EFRAVIEEHKDSKPSV-AEAAAPL---KTPENSPSAED 464

The following BLAST results are available for this feature:

BLAST of CcUC03G042890.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008457357.1	6.4e-103	93.61	PREDICTED: ran-binding protein 1 homolog a [Cucumis melo] >XP_011658664.2 ran-bi...	[more]
XP_038894876.1	2.4e-102	94.91	ran-binding protein 1 homolog a [Benincasa hispida]	[more]
XP_023519267.1	3.5e-101	92.20	ran-binding protein 1 homolog a-like [Cucurbita pepo subsp. pepo]	[more]
KAG6583353.1	7.8e-101	92.20	Ran-binding protein 1-like c, partial [Cucurbita argyrosperma subsp. sororia] >K...	[more]
XP_022970593.1	1.0e-100	92.20	ran-binding protein 1 homolog a-like [Cucurbita maxima]	[more]

BLAST of CcUC03G042890.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LMK7	5.1e-79	74.09	Ran-binding protein 1 homolog a OS=Arabidopsis thaliana OX=3702 GN=RANBP1A PE=1 ...	[more]
Q8RWG8	1.7e-74	71.77	Ran-binding protein 1 homolog b OS=Arabidopsis thaliana OX=3702 GN=RANBP1B PE=1 ...	[more]
P92985	3.2e-73	69.72	Ran-binding protein 1 homolog c OS=Arabidopsis thaliana OX=3702 GN=RANBP1C PE=2 ...	[more]
Q09717	1.2e-30	44.38	Ran-specific GTPase-activating protein 1 OS=Schizosaccharomyces pombe (strain 97...	[more]
P41920	1.2e-30	45.28	Ran-specific GTPase-activating protein 1 OS=Saccharomyces cerevisiae (strain ATC...	[more]

BLAST of CcUC03G042890.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UVN5	3.1e-103	93.61	Ran-binding protein 1-like protein a-like OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A0A0LXN6	3.1e-103	93.61	RanBD1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G532320 PE=4...	[more]
A0A1S3C5A9	3.1e-103	93.61	ran-binding protein 1 homolog a OS=Cucumis melo OX=3656 GN=LOC103497065 PE=4 SV=...	[more]
A0A6J1I4C6	4.9e-101	92.20	ran-binding protein 1 homolog a-like OS=Cucurbita maxima OX=3661 GN=LOC111469534...	[more]
A0A6J1HKC3	3.2e-100	90.09	ran-binding protein 1 homolog a-like OS=Cucurbita moschata OX=3662 GN=LOC1114648...	[more]

BLAST of CcUC03G042890.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07140.1	3.6e-80	74.09	Pleckstrin homology (PH) domain superfamily protein	[more]
AT2G30060.1	1.2e-75	71.77	Pleckstrin homology (PH) domain superfamily protein	[more]
AT5G58590.1	2.3e-74	69.72	RAN binding protein 1	[more]
AT3G15970.1	7.7e-06	31.01	NUP50 (Nucleoporin 50 kDa) protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000156	Ran binding domain	SMART	SM00160	ranbd_3	coord: 26..154 e-value: 1.7E-41 score: 153.9
IPR000156	Ran binding domain	PFAM	PF00638	Ran_BP1	coord: 37..154 e-value: 1.5E-39 score: 135.0
IPR000156	Ran binding domain	PROSITE	PS50196	RANBD1	coord: 25..160 score: 34.429565
IPR011993	PH-like domain superfamily	GENE3D	2.30.29.30		coord: 9..172 e-value: 7.3E-54 score: 183.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 176..215
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 157..215
None	No IPR available	PANTHER	PTHR23138	RAN BINDING PROTEIN	coord: 6..215
None	No IPR available	PANTHER	PTHR23138:SF156	RAN-BINDING PROTEIN 1 HOMOLOG C-LIKE	coord: 6..215
None	No IPR available	CDD	cd13179	RanBD_RanBP1	coord: 23..156 e-value: 3.60902E-68 score: 203.569
None	No IPR available	SUPERFAMILY	50729	PH domain-like	coord: 24..162

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CcUC03G042890	CcUC03G042890	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC03G042890.1-exon	CcUC03G042890.1-exon-CicolChr03:577687..578529	exon
CcUC03G042890.1-exon	CcUC03G042890.1-exon-CicolChr03:580322..580447	exon
CcUC03G042890.1-exon	CcUC03G042890.1-exon-CicolChr03:581040..581191	exon
CcUC03G042890.1-exon	CcUC03G042890.1-exon-CicolChr03:581285..581608	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC03G042890.1-three_prime_utr	CcUC03G042890.1-three_prime_utr-CicolChr03:577687..578308	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC03G042890.1-cds	CcUC03G042890.1-cds-CicolChr03:578309..578529	CDS
CcUC03G042890.1-cds	CcUC03G042890.1-cds-CicolChr03:580322..580447	CDS
CcUC03G042890.1-cds	CcUC03G042890.1-cds-CicolChr03:581040..581191	CDS
CcUC03G042890.1-cds	CcUC03G042890.1-cds-CicolChr03:581285..581433	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC03G042890.1-five_prime_utr	CcUC03G042890.1-five_prime_utr-CicolChr03:581434..581608	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CcUC03G042890.1	CcUC03G042890.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0046907	intracellular transport
biological_process	GO:0050790	regulation of catalytic activity
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005643	nuclear pore
molecular_function	GO:0005096	GTPase activator activity