CcUC02G039940.1 (mRNA) Watermelon (PI 537277) v1

Overview


Name	CcUC02G039940.1
Type	mRNA
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	NAC domain-containing protein
Location	CicolChr02: 35237009 .. 35238124 (+)
Sequence length	947
RNA-Seq Expression	CcUC02G039940.1
Synteny	CcUC02G039940.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAGAACCGTGTGAAAACTTTCCACACACACACAGTACAAAGTCCCACATTTTTCTAATTTCACTCGGCAAAATCCCATATCATCTCTTTCATTTTATCTTATTACATATATATGTGTGTGTGTGTGTGTGATGCAAGAGGAAATTAAAAGAAACAAAGTAAAATGGAGGATCAGGTAATTGGCAATGATATTGAAGATGAAATTCTACCAGGTTTCCGATTCTTTCCGACGGAAGAAGAATTAGTATCGTTTTATTTGCACGACCAACTTGAAGGGCGGCGTAAGGATATCCACCGTGTGATTCCGGTGGTTGACATTTACGCCATTGAGCCATTCAATCTCTCCAGTTACGTAATAATATAATATGTCAATGTACTGATTTAAATTAATTAATGGGCTAATTAAGTATGTAATTAATAATTTTGCAGGGTATTCTGGGGAAAGGTGTAGGAGAGACAATGAGCAGTGGTTTTTCTTTGTGAAGCAGCAAGAGAGAGAAGCGAGAGGAGGGAGAGCTAATAGAACGACGTCGTCTGGATCTGGGTATTGGAAGGCTACCGGGTCTCCGGCTTATGTGTACTCTTCTCACAATAAGGTCATCGGAGTTAAGAAAACAATGGTGTTTTATAGAGGCAAAGCTCCCACCGGAACTAAAACTAAGTGGAAAATGAATGAATATAAAGCCATTCAAGACATTCCTCCTCATTCTCATTCCCCTTCCTCTTCTACTCCCACTCCCCAGGTACGTATTGAAATAAATATTTGTTCGCTGCATCTTATATCTTCCTTCTAATTATTGGTGTCTAAATTATCAATTATATATCGGCAGTTAAGGCATGAGTTCAGTTTGTGCCGAGTTTACGTGGTGTCGGGAAGCTTTCGAGCATTTGATCGCCGGCCATTACAAGCTTACAATTCATCAACTCACATACGATAGCGATAAGGAACTTTGTTCAAATCAACCACCGCCTTTCTCCACCTGTATACCACGTAATATCTTACATTATTATTACTATTTTTATCATTCATTTTCATTTTGTAATACAATTCCAGTTACCCAAATAATCCAACGCGCATCCATCTTTTTTCTTTTTAGTCATTTTGCTATGCAGCCC

mRNA sequence

AAAGAACCGTGTGAAAACTTTCCACACACACACAGTACAAAGTCCCACATTTTTCTAATTTCACTCGGCAAAATCCCATATCATCTCTTTCATTTTATCTTATTACATATATATGTGTGTGTGTGTGTGTGATGCAAGAGGAAATTAAAAGAAACAAAGTAAAATGGAGGATCAGGTAATTGGCAATGATATTGAAGATGAAATTCTACCAGGTTTCCGATTCTTTCCGACGGAAGAAGAATTAGTATCGTTTTATTTGCACGACCAACTTGAAGGGCGGCGTAAGGATATCCACCGTGTGATTCCGGTGGTTGACATTTACGCCATTGAGCCATTCAATCTCTCCAGGTATTCTGGGGAAAGGTGTAGGAGAGACAATGAGCAGTGGTTTTTCTTTGTGAAGCAGCAAGAGAGAGAAGCGAGAGGAGGGAGAGCTAATAGAACGACGTCGTCTGGATCTGGGTATTGGAAGGCTACCGGGTCTCCGGCTTATGTGTACTCTTCTCACAATAAGGTCATCGGAGTTAAGAAAACAATGGTGTTTTATAGAGGCAAAGCTCCCACCGGAACTAAAACTAAGTGGAAAATGAATGAATATAAAGCCATTCAAGACATTCCTCCTCATTCTCATTCCCCTTCCTCTTCTACTCCCACTCCCCAGTTAAGGCATGAGTTCAGTTTGTGCCGAGTTTACGTGGTGTCGGGAAGCTTTCGAGCATTTGATCGCCGGCCATTACAAGCTTACAATTCATCAACTCACATACGATAGCGATAAGGAACTTTGTTCAAATCAACCACCGCCTTTCTCCACCTGTATACCACGTAATATCTTACATTATTATTACTATTTTTATCATTCATTTTCATTTTGTAATACAATTCCAGTTACCCAAATAATCCAACGCGCATCCATCTTTTTTCTTTTTAGTCATTTTGCTATGCAGCCC

Coding sequence (CDS)

ATGGAGGATCAGGTAATTGGCAATGATATTGAAGATGAAATTCTACCAGGTTTCCGATTCTTTCCGACGGAAGAAGAATTAGTATCGTTTTATTTGCACGACCAACTTGAAGGGCGGCGTAAGGATATCCACCGTGTGATTCCGGTGGTTGACATTTACGCCATTGAGCCATTCAATCTCTCCAGGTATTCTGGGGAAAGGTGTAGGAGAGACAATGAGCAGTGGTTTTTCTTTGTGAAGCAGCAAGAGAGAGAAGCGAGAGGAGGGAGAGCTAATAGAACGACGTCGTCTGGATCTGGGTATTGGAAGGCTACCGGGTCTCCGGCTTATGTGTACTCTTCTCACAATAAGGTCATCGGAGTTAAGAAAACAATGGTGTTTTATAGAGGCAAAGCTCCCACCGGAACTAAAACTAAGTGGAAAATGAATGAATATAAAGCCATTCAAGACATTCCTCCTCATTCTCATTCCCCTTCCTCTTCTACTCCCACTCCCCAGTTAAGGCATGAGTTCAGTTTGTGCCGAGTTTACGTGGTGTCGGGAAGCTTTCGAGCATTTGATCGCCGGCCATTACAAGCTTACAATTCATCAACTCACATACGATAG

Protein sequence

MEDQVIGNDIEDEILPGFRFFPTEEELVSFYLHDQLEGRRKDIHRVIPVVDIYAIEPFNLSRYSGERCRRDNEQWFFFVKQQEREARGGRANRTTSSGSGYWKATGSPAYVYSSHNKVIGVKKTMVFYRGKAPTGTKTKWKMNEYKAIQDIPPHSHSPSSSTPTPQLRHEFSLCRVYVVSGSFRAFDRRPLQAYNSSTHIR

Homology

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BLAST of CcUC02G039940.1 vs. NCBI nr
Match: XP_038902139.1 (NAC domain-containing protein 90-like [Benincasa hispida])

HSP 1 Score: 358.6 bits (919), Expect = 3.5e-95
Identity = 174/195 (89.23%), Postives = 185/195 (94.87%), Query Frame = 0


Query: 1   MEDQVIGNDIEDEILPGFRFFPTEEELVSFYLHDQLEGRRKDIHRVIPVVDIYAIEPFNL 60
           M+DQVI    E+EILPGFRFFPTEEELVSFYLH+QL+GRRKD+HRVIPVVDIYAIEPF+L
Sbjct: 1   MDDQVIIGGEEEEILPGFRFFPTEEELVSFYLHNQLQGRRKDMHRVIPVVDIYAIEPFDL 60

Query: 61  SRYSGERCRRDNEQWFFFVKQQEREARGGRANRTTSSGSGYWKATGSPAYVYSSHNKVIG 120
           SRYSG+R RRD+EQWFFFVKQQEREARGGRANRTTSSGSGYWKATGSP+YVYSSHNKVIG
Sbjct: 61  SRYSGQRSRRDSEQWFFFVKQQEREARGGRANRTTSSGSGYWKATGSPSYVYSSHNKVIG 120

Query: 121 VKKTMVFYRGKAPTGTKTKWKMNEYKAIQDIPPHSHSPSSSTPTPQLRHEFSLCRVYVVS 180
           VKKTMVFYRGKAPTG KTKWKMNEYKAIQ+IPP  HSPSSSTP PQLRHEFSLCRVYVVS
Sbjct: 121 VKKTMVFYRGKAPTGNKTKWKMNEYKAIQNIPP--HSPSSSTPIPQLRHEFSLCRVYVVS 180

Query: 181 GSFRAFDRRPLQAYN 196
           GSFRAFDRRPL+A N
Sbjct: 181 GSFRAFDRRPLEACN 193

[Close]

BLAST of CcUC02G039940.1 vs. NCBI nr
Match: XP_008449583.1 (PREDICTED: NAC domain-containing protein 90 [Cucumis melo])

HSP 1 Score: 348.2 bits (892), Expect = 4.7e-92
Identity = 169/187 (90.37%), Postives = 175/187 (93.58%), Query Frame = 0


Query: 11  EDEILPGFRFFPTEEELVSFYLHDQLEGRRKDIHRVIPVVDIYAIEPFNLSRYSGERCRR 70
           ED+ILPGFRFFPTEEELV FYLH+QL+G RKDIHRVIPVVDIY IEPFNLSRYSGERCRR
Sbjct: 17  EDQILPGFRFFPTEEELVLFYLHNQLQGWRKDIHRVIPVVDIYEIEPFNLSRYSGERCRR 76

Query: 71  DNEQWFFFVKQQEREARGGRANRTTSSGSGYWKATGSPAYVYSSHNKVIGVKKTMVFYRG 130
           D+EQWFFFVKQQEREARGGRANRTTSSGSGYWKATGSP YVYSS N+VIGVKKTMVFYRG
Sbjct: 77  DSEQWFFFVKQQEREARGGRANRTTSSGSGYWKATGSPTYVYSSENRVIGVKKTMVFYRG 136

Query: 131 KAPTGTKTKWKMNEYKAIQDIPPHSHSPSSSTPTPQLRHEFSLCRVYVVSGSFRAFDRRP 190
           KAPTGTKTKWKMNEYKAIQDI P  H PSSSTP PQLRHEFSLCRVYVVSGSFRAFDRRP
Sbjct: 137 KAPTGTKTKWKMNEYKAIQDIIP-PHYPSSSTPIPQLRHEFSLCRVYVVSGSFRAFDRRP 196

Query: 191 LQAYNSS 198
           L+ YN S
Sbjct: 197 LEVYNRS 202

[Close]

BLAST of CcUC02G039940.1 vs. NCBI nr
Match: XP_004140261.1 (NAC domain-containing protein 90 [Cucumis sativus] >KGN48035.1 hypothetical protein Csa_004460 [Cucumis sativus])

HSP 1 Score: 344.4 bits (882), Expect = 6.8e-91
Identity = 170/195 (87.18%), Postives = 179/195 (91.79%), Query Frame = 0


Query: 3   DQVI--GNDIEDEILPGFRFFPTEEELVSFYLHDQLEGRRKDIHRVIPVVDIYAIEPFNL 62
           DQVI    + ED+ LPGFRFFPTEEELV FYLH+QL+G RKDIHRVIPVVDIY IEPFNL
Sbjct: 4   DQVIIREEEEEDQSLPGFRFFPTEEELVLFYLHNQLQGCRKDIHRVIPVVDIYEIEPFNL 63

Query: 63  SRYSGERCRRDNEQWFFFVKQQEREARGGRANRTTSSGSGYWKATGSPAYVYSSHNKVIG 122
           SRYSGERCRRD+EQWFFFVKQQER+ARGGRANRTTSSGSGYWKATGSP YVYSS N+VIG
Sbjct: 64  SRYSGERCRRDSEQWFFFVKQQERQARGGRANRTTSSGSGYWKATGSPTYVYSSENRVIG 123

Query: 123 VKKTMVFYRGKAPTGTKTKWKMNEYKAIQDIPPHSHSPSSSTPTPQLRHEFSLCRVYVVS 182
           VKKTMVFYRGKAPTGTKTKWKMNEYKAIQDI P  HSP SSTP PQLRHEFSLCRVYVVS
Sbjct: 124 VKKTMVFYRGKAPTGTKTKWKMNEYKAIQDIIP-PHSPFSSTPIPQLRHEFSLCRVYVVS 183

Query: 183 GSFRAFDRRPLQAYN 196
           GSFRAFDRRPL+AY+
Sbjct: 184 GSFRAFDRRPLKAYS 197

[Close]

BLAST of CcUC02G039940.1 vs. NCBI nr
Match: XP_022995147.1 (NAC domain-containing protein 90 [Cucurbita maxima])

HSP 1 Score: 332.4 bits (851), Expect = 2.7e-87
Identity = 162/190 (85.26%), Postives = 175/190 (92.11%), Query Frame = 0


Query: 7   GNDIED-EILPGFRFFPTEEELVSFYLHDQLEGRRKDIHRVIPVVDIYAIEPFNLSRYSG 66
           G ++ D EI PGFRFFPTEEELVSFYLH+QL+GRRKDIHRVIPVVDIY+IEPFNLSR+SG
Sbjct: 9   GEELADREITPGFRFFPTEEELVSFYLHNQLQGRRKDIHRVIPVVDIYSIEPFNLSRWSG 68

Query: 67  ERCRRDNEQWFFFVKQQEREARGGRANRTTSSGSGYWKATGSPAYVYSSHNKVIGVKKTM 126
           ERCRRD+EQWFFFVKQQEREARGGR NRTTSSGSGYWKATGSP+YVYSS N+VIGVKKTM
Sbjct: 69  ERCRRDSEQWFFFVKQQEREARGGRPNRTTSSGSGYWKATGSPSYVYSSDNRVIGVKKTM 128

Query: 127 VFYRGKAPTGTKTKWKMNEYKAIQDIPPHSHSPSSSTPTPQLRHEFSLCRVYVVSGSFRA 186
           VFYRGKAPTGTKTKWKMNEYKAI+D     +S SSS PTP+LRHEFSLCRVYVVSGSFRA
Sbjct: 129 VFYRGKAPTGTKTKWKMNEYKAIED----DYSNSSSIPTPELRHEFSLCRVYVVSGSFRA 188

Query: 187 FDRRPLQAYN 196
           FDRRPL+  N
Sbjct: 189 FDRRPLKCRN 194

[Close]

BLAST of CcUC02G039940.1 vs. NCBI nr
Match: XP_023533663.1 (NAC domain-containing protein 90 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 327.4 bits (838), Expect = 8.6e-86
Identity = 159/183 (86.89%), Postives = 169/183 (92.35%), Query Frame = 0


Query: 13  EILPGFRFFPTEEELVSFYLHDQLEGRRKDIHRVIPVVDIYAIEPFNLSRYSGERCRRDN 72
           EI PGFRFFPTEEELVSFYLH+QL+GRRKDIHRVIPVVDIY+IEPFNLS  SGERCRRD+
Sbjct: 16  EITPGFRFFPTEEELVSFYLHNQLQGRRKDIHRVIPVVDIYSIEPFNLSGCSGERCRRDS 75

Query: 73  EQWFFFVKQQEREARGGRANRTTSSGSGYWKATGSPAYVYSSHNKVIGVKKTMVFYRGKA 132
           EQWFFFVKQQEREARGGR NRTTSSGSGYWKATGSP+YVYSS N+VIGVKKTMVFYRGKA
Sbjct: 76  EQWFFFVKQQEREARGGRPNRTTSSGSGYWKATGSPSYVYSSDNRVIGVKKTMVFYRGKA 135

Query: 133 PTGTKTKWKMNEYKAIQDIPPHSHSPSSSTPTPQLRHEFSLCRVYVVSGSFRAFDRRPLQ 192
           PTGTKTKWKMNEYKAI+D     +S SSS PTP+LRHEFSLCRVYVVSGSFRAFDRRPL+
Sbjct: 136 PTGTKTKWKMNEYKAIED----DYSNSSSIPTPELRHEFSLCRVYVVSGSFRAFDRRPLK 194

Query: 193 AYN 196
             N
Sbjct: 196 CRN 194

[Close]

BLAST of CcUC02G039940.1 vs. ExPASy Swiss-Prot
Match: Q9FMR3 (NAC domain-containing protein 90 OS=Arabidopsis thaliana OX=3702 GN=NAC090 PE=1 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 2.0e-61
Identity = 117/180 (65.00%), Postives = 139/180 (77.22%), Query Frame = 0


Query: 12  DEILPGFRFFPTEEELVSFYLHDQLEGRRKD-IHRVIPVVDIYAIEPFNLSRYSGERCRR 71
           DE+  GFRF+PTEEELVSFYL +QLEGR  D +HRVIPV+D++ +EP +L   +G RCR 
Sbjct: 3   DEVTIGFRFYPTEEELVSFYLRNQLEGRSDDSMHRVIPVLDVFEVEPSHLPNVAGVRCRG 62

Query: 72  DNEQWFFFVKQQEREARGGRANRTTSSGSGYWKATGSPAYVYSSHNKVIGVKKTMVFYRG 131
           D EQWFFFV +QEREARGGR +RTT  GSGYWKATGSP  V+S  NK+IG KKTMVFY G
Sbjct: 63  DAEQWFFFVPRQEREARGGRPSRTT--GSGYWKATGSPGPVFSKDNKMIGAKKTMVFYTG 122

Query: 132 KAPTGTKTKWKMNEYKAIQDIPPHSHSPSSSTPTPQLRHEFSLCRVYVVSGSFRAFDRRP 191
           KAPTG KTKWKMNEY A+ +         +++  P+LR EFSLCRVY+ +GS RAFDRRP
Sbjct: 123 KAPTGRKTKWKMNEYHAVDE-------TVNASTIPKLRREFSLCRVYITTGSSRAFDRRP 173

[Close]

BLAST of CcUC02G039940.1 vs. ExPASy Swiss-Prot
Match: Q9M290 (Putative NAC domain-containing protein 61 OS=Arabidopsis thaliana OX=3702 GN=NAC061 PE=3 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 1.6e-50
Identity = 103/183 (56.28%), Postives = 127/183 (69.40%), Query Frame = 0


Query: 12  DEILPGFRFFPTEEELVSFYLHDQLEGRRKDIHRVIPVVDIYAIEPFNLSRYSGERCRRD 71
           +E+  GFRF+PTE EL+++YL  QL G    IH +IP++D++++EP  L   +GERCR D
Sbjct: 3   EELSVGFRFYPTEVELLTYYLRIQLGGGNATIHSLIPILDVFSVEPTQLPNLAGERCRGD 62

Query: 72  NEQWFFFVKQQEREARGGRANRTTSSGSGYWKATGSPAYVYSSHNKVIGVKKTMVFYRGK 131
            EQW FFV +QEREARGGR +RTT  GSGYWKATGSP  V+S  N+VIGVKKTMVFY GK
Sbjct: 63  AEQWIFFVPRQEREARGGRPSRTT--GSGYWKATGSPGPVFSPDNRVIGVKKTMVFYTGK 122

Query: 132 APTGTKTKWKMNEYKAIQDIPPHSHSPSSSTPTPQLRHEFSLCRVYVVSGSFRAFDRRPL 191
           APTG KTKWKMNEYKA++         +S +  P+             SGS RAFDRRP 
Sbjct: 123 APTGRKTKWKMNEYKAVE--------TASVSTIPK-------------SGSSRAFDRRPT 162

Query: 192 QAY 195
           +AY
Sbjct: 183 EAY 162

[Close]

BLAST of CcUC02G039940.1 vs. ExPASy Swiss-Prot
Match: Q9ZVP8 (NAC domain-containing protein 35 OS=Arabidopsis thaliana OX=3702 GN=NAC035 PE=1 SV=2)

HSP 1 Score: 132.9 bits (333), Expect = 4.1e-30
Identity = 74/178 (41.57%), Postives = 107/178 (60.11%), Query Frame = 0


Query: 2   EDQVIGNDIEDEILPGFRFFPTEEELVSFYLHDQLEGRRKDIHRVIPVVDIYAIEPFNLS 61
           ED+   +D  D ++PGFRF PTEEEL+ FYL  ++EG+R ++  +I  +D+Y  +P+ L 
Sbjct: 40  EDEADDHD-HDMVMPGFRFHPTEEELIEFYLRRKVEGKRFNV-ELITFLDLYRYDPWELP 99

Query: 62  RYS--GERCRRDNEQWFFFVKQQEREARGGRANRTTSSGSGYWKATGSPAYVYSSHNKVI 121
             +  GE+      +W+F+V +  +   G R NR T+  SGYWKATG+   + S  ++ I
Sbjct: 100 AMAAIGEK------EWYFYVPRDRKYRNGDRPNRVTT--SGYWKATGADRMIRSETSRPI 159

Query: 122 GVKKTMVFYRGKAPTGTKTKWKMNEYKAIQDIPPHSHSPSSSTPTPQLRHEFSLCRVY 178
           G+KKT+VFY GKAP GT+T W MNEY+      PH  +          + E SLCRVY
Sbjct: 160 GLKKTLVFYSGKAPKGTRTSWIMNEYRL-----PHHETEKYQ------KAEISLCRVY 196

[Close]

BLAST of CcUC02G039940.1 vs. ExPASy Swiss-Prot
Match: A2WQE4 (NAC domain-containing protein 26 OS=Oryza sativa subsp. indica OX=39946 GN=NAC26 PE=1 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.3e-28
Identity = 64/182 (35.16%), Postives = 107/182 (58.79%), Query Frame = 0


Query: 11  EDEILPGFRFFPTEEELVSFYLHDQLEGRRKDIHRVIPVVDIYAIEPFNLSRYSGERCRR 70
           + ++ PGFRF PT+EE+++FYL  ++   R      I  VD+   EP++L    G+    
Sbjct: 11  QPDLPPGFRFHPTDEEIITFYLAPKVVDSRGFCVAAIGEVDLNKCEPWDL---PGKAKMN 70

Query: 71  DNEQWFFFVKQQEREARGGRANRTTSSGSGYWKATGSPAYVYSSHNKVIGVKKTMVFYRG 130
             ++W+F+ ++  +   G R NR T   +GYWKATG    ++ +H+ +IG+KKT+VFY+G
Sbjct: 71  GEKEWYFYCQKDRKYPTGMRTNRATE--AGYWKATGKDKEIFRNHHMLIGMKKTLVFYKG 130

Query: 131 KAPTGTKTKWKMNEYKAIQDIPPHSHSPSSSTPTPQLRHEFSLCRVYVVSGSFRAFDRRP 190
           +AP G KT W M+EY+     PP    P SS   P+ + ++++CR++  S   +   + P
Sbjct: 131 RAPKGDKTNWVMHEYRLADASPPQPPPPPSSAEPPR-QDDWAVCRIFHKSSGIKKPVQVP 186

Query: 191 LQ 193
           +Q
Sbjct: 191 MQ 186

[Close]

BLAST of CcUC02G039940.1 vs. ExPASy Swiss-Prot
Match: Q5VNK1 (NAC domain-containing protein 26 OS=Oryza sativa subsp. japonica OX=39947 GN=NAC26 PE=1 SV=2)

HSP 1 Score: 127.9 bits (320), Expect = 1.3e-28
Identity = 64/182 (35.16%), Postives = 107/182 (58.79%), Query Frame = 0


Query: 11  EDEILPGFRFFPTEEELVSFYLHDQLEGRRKDIHRVIPVVDIYAIEPFNLSRYSGERCRR 70
           + ++ PGFRF PT+EE+++FYL  ++   R      I  VD+   EP++L    G+    
Sbjct: 11  QPDLPPGFRFHPTDEEIITFYLAPKVVDSRGFCVAAIGEVDLNKCEPWDL---PGKAKMN 70

Query: 71  DNEQWFFFVKQQEREARGGRANRTTSSGSGYWKATGSPAYVYSSHNKVIGVKKTMVFYRG 130
             ++W+F+ ++  +   G R NR T   +GYWKATG    ++ +H+ +IG+KKT+VFY+G
Sbjct: 71  GEKEWYFYCQKDRKYPTGMRTNRATE--AGYWKATGKDKEIFRNHHMLIGMKKTLVFYKG 130

Query: 131 KAPTGTKTKWKMNEYKAIQDIPPHSHSPSSSTPTPQLRHEFSLCRVYVVSGSFRAFDRRP 190
           +AP G KT W M+EY+     PP    P SS   P+ + ++++CR++  S   +   + P
Sbjct: 131 RAPKGDKTNWVMHEYRLADASPPQPPPPPSSAEPPR-QDDWAVCRIFHKSSGIKKPVQVP 186

Query: 191 LQ 193
           +Q
Sbjct: 191 MQ 186

[Close]

BLAST of CcUC02G039940.1 vs. ExPASy TrEMBL
Match: A0A1S3BMD5 (NAC domain-containing protein 90 OS=Cucumis melo OX=3656 GN=LOC103491423 PE=4 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 2.3e-92
Identity = 169/187 (90.37%), Postives = 175/187 (93.58%), Query Frame = 0


Query: 11  EDEILPGFRFFPTEEELVSFYLHDQLEGRRKDIHRVIPVVDIYAIEPFNLSRYSGERCRR 70
           ED+ILPGFRFFPTEEELV FYLH+QL+G RKDIHRVIPVVDIY IEPFNLSRYSGERCRR
Sbjct: 17  EDQILPGFRFFPTEEELVLFYLHNQLQGWRKDIHRVIPVVDIYEIEPFNLSRYSGERCRR 76

Query: 71  DNEQWFFFVKQQEREARGGRANRTTSSGSGYWKATGSPAYVYSSHNKVIGVKKTMVFYRG 130
           D+EQWFFFVKQQEREARGGRANRTTSSGSGYWKATGSP YVYSS N+VIGVKKTMVFYRG
Sbjct: 77  DSEQWFFFVKQQEREARGGRANRTTSSGSGYWKATGSPTYVYSSENRVIGVKKTMVFYRG 136

Query: 131 KAPTGTKTKWKMNEYKAIQDIPPHSHSPSSSTPTPQLRHEFSLCRVYVVSGSFRAFDRRP 190
           KAPTGTKTKWKMNEYKAIQDI P  H PSSSTP PQLRHEFSLCRVYVVSGSFRAFDRRP
Sbjct: 137 KAPTGTKTKWKMNEYKAIQDIIP-PHYPSSSTPIPQLRHEFSLCRVYVVSGSFRAFDRRP 196

Query: 191 LQAYNSS 198
           L+ YN S
Sbjct: 197 LEVYNRS 202

[Close]

BLAST of CcUC02G039940.1 vs. ExPASy TrEMBL
Match: A0A0A0KEE9 (NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G425720 PE=4 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 3.3e-91
Identity = 170/195 (87.18%), Postives = 179/195 (91.79%), Query Frame = 0


Query: 3   DQVI--GNDIEDEILPGFRFFPTEEELVSFYLHDQLEGRRKDIHRVIPVVDIYAIEPFNL 62
           DQVI    + ED+ LPGFRFFPTEEELV FYLH+QL+G RKDIHRVIPVVDIY IEPFNL
Sbjct: 4   DQVIIREEEEEDQSLPGFRFFPTEEELVLFYLHNQLQGCRKDIHRVIPVVDIYEIEPFNL 63

Query: 63  SRYSGERCRRDNEQWFFFVKQQEREARGGRANRTTSSGSGYWKATGSPAYVYSSHNKVIG 122
           SRYSGERCRRD+EQWFFFVKQQER+ARGGRANRTTSSGSGYWKATGSP YVYSS N+VIG
Sbjct: 64  SRYSGERCRRDSEQWFFFVKQQERQARGGRANRTTSSGSGYWKATGSPTYVYSSENRVIG 123

Query: 123 VKKTMVFYRGKAPTGTKTKWKMNEYKAIQDIPPHSHSPSSSTPTPQLRHEFSLCRVYVVS 182
           VKKTMVFYRGKAPTGTKTKWKMNEYKAIQDI P  HSP SSTP PQLRHEFSLCRVYVVS
Sbjct: 124 VKKTMVFYRGKAPTGTKTKWKMNEYKAIQDIIP-PHSPFSSTPIPQLRHEFSLCRVYVVS 183

Query: 183 GSFRAFDRRPLQAYN 196
           GSFRAFDRRPL+AY+
Sbjct: 184 GSFRAFDRRPLKAYS 197

[Close]

BLAST of CcUC02G039940.1 vs. ExPASy TrEMBL
Match: A0A6J1JXZ0 (NAC domain-containing protein 90 OS=Cucurbita maxima OX=3661 GN=LOC111490775 PE=4 SV=1)

HSP 1 Score: 332.4 bits (851), Expect = 1.3e-87
Identity = 162/190 (85.26%), Postives = 175/190 (92.11%), Query Frame = 0


Query: 7   GNDIED-EILPGFRFFPTEEELVSFYLHDQLEGRRKDIHRVIPVVDIYAIEPFNLSRYSG 66
           G ++ D EI PGFRFFPTEEELVSFYLH+QL+GRRKDIHRVIPVVDIY+IEPFNLSR+SG
Sbjct: 9   GEELADREITPGFRFFPTEEELVSFYLHNQLQGRRKDIHRVIPVVDIYSIEPFNLSRWSG 68

Query: 67  ERCRRDNEQWFFFVKQQEREARGGRANRTTSSGSGYWKATGSPAYVYSSHNKVIGVKKTM 126
           ERCRRD+EQWFFFVKQQEREARGGR NRTTSSGSGYWKATGSP+YVYSS N+VIGVKKTM
Sbjct: 69  ERCRRDSEQWFFFVKQQEREARGGRPNRTTSSGSGYWKATGSPSYVYSSDNRVIGVKKTM 128

Query: 127 VFYRGKAPTGTKTKWKMNEYKAIQDIPPHSHSPSSSTPTPQLRHEFSLCRVYVVSGSFRA 186
           VFYRGKAPTGTKTKWKMNEYKAI+D     +S SSS PTP+LRHEFSLCRVYVVSGSFRA
Sbjct: 129 VFYRGKAPTGTKTKWKMNEYKAIED----DYSNSSSIPTPELRHEFSLCRVYVVSGSFRA 188

Query: 187 FDRRPLQAYN 196
           FDRRPL+  N
Sbjct: 189 FDRRPLKCRN 194

[Close]

BLAST of CcUC02G039940.1 vs. ExPASy TrEMBL
Match: A0A6J1H553 (NAC domain-containing protein 90 OS=Cucurbita moschata OX=3662 GN=LOC111459674 PE=4 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 4.2e-86
Identity = 159/185 (85.95%), Postives = 170/185 (91.89%), Query Frame = 0


Query: 11  EDEILPGFRFFPTEEELVSFYLHDQLEGRRKDIHRVIPVVDIYAIEPFNLSRYSGERCRR 70
           + EI PGFRFFPTEEELVSFYLH+QL+GRRKDIHRVIPVVDIY+IEPFNLS  SGERCRR
Sbjct: 14  DGEITPGFRFFPTEEELVSFYLHNQLQGRRKDIHRVIPVVDIYSIEPFNLSGCSGERCRR 73

Query: 71  DNEQWFFFVKQQEREARGGRANRTTSSGSGYWKATGSPAYVYSSHNKVIGVKKTMVFYRG 130
           D+EQWFFFVKQQEREARGGR NRTTSSGSGYWKATGSP+YVYSS N+VIGVKKTMVFYRG
Sbjct: 74  DSEQWFFFVKQQEREARGGRPNRTTSSGSGYWKATGSPSYVYSSDNRVIGVKKTMVFYRG 133

Query: 131 KAPTGTKTKWKMNEYKAIQDIPPHSHSPSSSTPTPQLRHEFSLCRVYVVSGSFRAFDRRP 190
           KAPTGTKTKWKMNEYKAI+D     +S SSS PTP+LRHEFSLCRVYVVSGSFRAFDRRP
Sbjct: 134 KAPTGTKTKWKMNEYKAIED----DYSNSSSIPTPELRHEFSLCRVYVVSGSFRAFDRRP 193

Query: 191 LQAYN 196
           L+  N
Sbjct: 194 LKCRN 194

[Close]

BLAST of CcUC02G039940.1 vs. ExPASy TrEMBL
Match: A0A6J1DFI9 (NAC domain-containing protein 90-like OS=Momordica charantia OX=3673 GN=LOC111020611 PE=4 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 1.8e-84
Identity = 155/195 (79.49%), Postives = 175/195 (89.74%), Query Frame = 0


Query: 3   DQVIGNDIE--DEILPGFRFFPTEEELVSFYLHDQLEGRRKDIHRVIPVVDIYAIEPFNL 62
           D+V+  + E   E+LPGFRFFPTEEEL+SFYLH+QL+GRR++IHRVIPV+DIY+IEPFNL
Sbjct: 14  DEVVRGEEEAAQELLPGFRFFPTEEELISFYLHNQLQGRRREIHRVIPVLDIYSIEPFNL 73

Query: 63  SRYSGERCRRDNEQWFFFVKQQEREARGGRANRTTSSGSGYWKATGSPAYVYSSHNKVIG 122
           SRYSGERCRR+ EQWFFFVKQQ+REARGGR NRTTSSGSGYWKATGSP YVYSS N+VIG
Sbjct: 74  SRYSGERCRREREQWFFFVKQQDREARGGRPNRTTSSGSGYWKATGSPGYVYSSDNRVIG 133

Query: 123 VKKTMVFYRGKAPTGTKTKWKMNEYKAIQDIPPHSHSPSSSTPTPQLRHEFSLCRVYVVS 182
           +KKTMVFY+GKAPTGTKTKWKMNEYKAIQD     H  SSS+ TP+LRHEFSLCR+YVVS
Sbjct: 134 LKKTMVFYKGKAPTGTKTKWKMNEYKAIQD-----HQTSSSS-TPELRHEFSLCRIYVVS 193

Query: 183 GSFRAFDRRPLQAYN 196
           GSFRAFDRRPL+  N
Sbjct: 194 GSFRAFDRRPLEVCN 202

[Close]

BLAST of CcUC02G039940.1 vs. TAIR 10
Match: AT5G22380.1 (NAC domain containing protein 90 )

HSP 1 Score: 236.9 bits (603), Expect = 1.4e-62
Identity = 117/180 (65.00%), Postives = 139/180 (77.22%), Query Frame = 0


Query: 12  DEILPGFRFFPTEEELVSFYLHDQLEGRRKD-IHRVIPVVDIYAIEPFNLSRYSGERCRR 71
           DE+  GFRF+PTEEELVSFYL +QLEGR  D +HRVIPV+D++ +EP +L   +G RCR 
Sbjct: 3   DEVTIGFRFYPTEEELVSFYLRNQLEGRSDDSMHRVIPVLDVFEVEPSHLPNVAGVRCRG 62

Query: 72  DNEQWFFFVKQQEREARGGRANRTTSSGSGYWKATGSPAYVYSSHNKVIGVKKTMVFYRG 131
           D EQWFFFV +QEREARGGR +RTT  GSGYWKATGSP  V+S  NK+IG KKTMVFY G
Sbjct: 63  DAEQWFFFVPRQEREARGGRPSRTT--GSGYWKATGSPGPVFSKDNKMIGAKKTMVFYTG 122

Query: 132 KAPTGTKTKWKMNEYKAIQDIPPHSHSPSSSTPTPQLRHEFSLCRVYVVSGSFRAFDRRP 191
           KAPTG KTKWKMNEY A+ +         +++  P+LR EFSLCRVY+ +GS RAFDRRP
Sbjct: 123 KAPTGRKTKWKMNEYHAVDE-------TVNASTIPKLRREFSLCRVYITTGSSRAFDRRP 173

[Close]

BLAST of CcUC02G039940.1 vs. TAIR 10
Match: AT3G44350.2 (NAC domain containing protein 61 )

HSP 1 Score: 229.6 bits (584), Expect = 2.3e-60
Identity = 111/183 (60.66%), Postives = 138/183 (75.41%), Query Frame = 0


Query: 12  DEILPGFRFFPTEEELVSFYLHDQLEGRRKDIHRVIPVVDIYAIEPFNLSRYSGERCRRD 71
           +E+  GFRF+PTE EL+++YL  QL G    IH +IP++D++++EP  L   +GERCR D
Sbjct: 3   EELSVGFRFYPTEVELLTYYLRIQLGGGNATIHSLIPILDVFSVEPTQLPNLAGERCRGD 62

Query: 72  NEQWFFFVKQQEREARGGRANRTTSSGSGYWKATGSPAYVYSSHNKVIGVKKTMVFYRGK 131
            EQW FFV +QEREARGGR +RTT  GSGYWKATGSP  V+S  N+VIGVKKTMVFY GK
Sbjct: 63  AEQWIFFVPRQEREARGGRPSRTT--GSGYWKATGSPGPVFSPDNRVIGVKKTMVFYTGK 122

Query: 132 APTGTKTKWKMNEYKAIQDIPPHSHSPSSSTPTPQLRHEFSLCRVYVVSGSFRAFDRRPL 191
           APTG KTKWKMNEYKA++         +S +  P+LR EFS+CR+Y+ SGS RAFDRRP 
Sbjct: 123 APTGRKTKWKMNEYKAVE--------TASVSTIPKLRPEFSICRIYIKSGSSRAFDRRPT 175

Query: 192 QAY 195
           +AY
Sbjct: 183 EAY 175

[Close]

BLAST of CcUC02G039940.1 vs. TAIR 10
Match: AT3G44350.1 (NAC domain containing protein 61 )

HSP 1 Score: 200.7 bits (509), Expect = 1.1e-51
Identity = 103/183 (56.28%), Postives = 127/183 (69.40%), Query Frame = 0


Query: 12  DEILPGFRFFPTEEELVSFYLHDQLEGRRKDIHRVIPVVDIYAIEPFNLSRYSGERCRRD 71
           +E+  GFRF+PTE EL+++YL  QL G    IH +IP++D++++EP  L   +GERCR D
Sbjct: 3   EELSVGFRFYPTEVELLTYYLRIQLGGGNATIHSLIPILDVFSVEPTQLPNLAGERCRGD 62

Query: 72  NEQWFFFVKQQEREARGGRANRTTSSGSGYWKATGSPAYVYSSHNKVIGVKKTMVFYRGK 131
            EQW FFV +QEREARGGR +RTT  GSGYWKATGSP  V+S  N+VIGVKKTMVFY GK
Sbjct: 63  AEQWIFFVPRQEREARGGRPSRTT--GSGYWKATGSPGPVFSPDNRVIGVKKTMVFYTGK 122

Query: 132 APTGTKTKWKMNEYKAIQDIPPHSHSPSSSTPTPQLRHEFSLCRVYVVSGSFRAFDRRPL 191
           APTG KTKWKMNEYKA++         +S +  P+             SGS RAFDRRP 
Sbjct: 123 APTGRKTKWKMNEYKAVE--------TASVSTIPK-------------SGSSRAFDRRPT 162

Query: 192 QAY 195
           +AY
Sbjct: 183 EAY 162

[Close]

BLAST of CcUC02G039940.1 vs. TAIR 10
Match: AT2G02450.1 (NAC domain containing protein 35 )

HSP 1 Score: 132.9 bits (333), Expect = 2.9e-31
Identity = 74/178 (41.57%), Postives = 107/178 (60.11%), Query Frame = 0


Query: 2   EDQVIGNDIEDEILPGFRFFPTEEELVSFYLHDQLEGRRKDIHRVIPVVDIYAIEPFNLS 61
           ED+   +D  D ++PGFRF PTEEEL+ FYL  ++EG+R ++  +I  +D+Y  +P+ L 
Sbjct: 40  EDEADDHD-HDMVMPGFRFHPTEEELIEFYLRRKVEGKRFNV-ELITFLDLYRYDPWELP 99

Query: 62  RYS--GERCRRDNEQWFFFVKQQEREARGGRANRTTSSGSGYWKATGSPAYVYSSHNKVI 121
             +  GE+      +W+F+V +  +   G R NR T+  SGYWKATG+   + S  ++ I
Sbjct: 100 AMAAIGEK------EWYFYVPRDRKYRNGDRPNRVTT--SGYWKATGADRMIRSETSRPI 159

Query: 122 GVKKTMVFYRGKAPTGTKTKWKMNEYKAIQDIPPHSHSPSSSTPTPQLRHEFSLCRVY 178
           G+KKT+VFY GKAP GT+T W MNEY+      PH  +          + E SLCRVY
Sbjct: 160 GLKKTLVFYSGKAPKGTRTSWIMNEYRL-----PHHETEKYQ------KAEISLCRVY 196

[Close]

BLAST of CcUC02G039940.1 vs. TAIR 10
Match: AT2G02450.2 (NAC domain containing protein 35 )

HSP 1 Score: 132.9 bits (333), Expect = 2.9e-31
Identity = 74/178 (41.57%), Postives = 107/178 (60.11%), Query Frame = 0


Query: 2   EDQVIGNDIEDEILPGFRFFPTEEELVSFYLHDQLEGRRKDIHRVIPVVDIYAIEPFNLS 61
           ED+   +D  D ++PGFRF PTEEEL+ FYL  ++EG+R ++  +I  +D+Y  +P+ L 
Sbjct: 40  EDEADDHD-HDMVMPGFRFHPTEEELIEFYLRRKVEGKRFNV-ELITFLDLYRYDPWELP 99

Query: 62  RYS--GERCRRDNEQWFFFVKQQEREARGGRANRTTSSGSGYWKATGSPAYVYSSHNKVI 121
             +  GE+      +W+F+V +  +   G R NR T+  SGYWKATG+   + S  ++ I
Sbjct: 100 AMAAIGEK------EWYFYVPRDRKYRNGDRPNRVTT--SGYWKATGADRMIRSETSRPI 159

Query: 122 GVKKTMVFYRGKAPTGTKTKWKMNEYKAIQDIPPHSHSPSSSTPTPQLRHEFSLCRVY 178
           G+KKT+VFY GKAP GT+T W MNEY+      PH  +          + E SLCRVY
Sbjct: 160 GLKKTLVFYSGKAPKGTRTSWIMNEYRL-----PHHETEKYQ------KAEISLCRVY 196

The following BLAST results are available for this feature:

BLAST of CcUC02G039940.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038902139.1	3.5e-95	89.23	NAC domain-containing protein 90-like [Benincasa hispida]	[more]
XP_008449583.1	4.7e-92	90.37	PREDICTED: NAC domain-containing protein 90 [Cucumis melo]	[more]
XP_004140261.1	6.8e-91	87.18	NAC domain-containing protein 90 [Cucumis sativus] >KGN48035.1 hypothetical prot...	[more]
XP_022995147.1	2.7e-87	85.26	NAC domain-containing protein 90 [Cucurbita maxima]	[more]
XP_023533663.1	8.6e-86	86.89	NAC domain-containing protein 90 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CcUC02G039940.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FMR3	2.0e-61	65.00	NAC domain-containing protein 90 OS=Arabidopsis thaliana OX=3702 GN=NAC090 PE=1 ...	[more]
Q9M290	1.6e-50	56.28	Putative NAC domain-containing protein 61 OS=Arabidopsis thaliana OX=3702 GN=NAC...	[more]
Q9ZVP8	4.1e-30	41.57	NAC domain-containing protein 35 OS=Arabidopsis thaliana OX=3702 GN=NAC035 PE=1 ...	[more]
A2WQE4	1.3e-28	35.16	NAC domain-containing protein 26 OS=Oryza sativa subsp. indica OX=39946 GN=NAC26...	[more]
Q5VNK1	1.3e-28	35.16	NAC domain-containing protein 26 OS=Oryza sativa subsp. japonica OX=39947 GN=NAC...	[more]

BLAST of CcUC02G039940.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BMD5	2.3e-92	90.37	NAC domain-containing protein 90 OS=Cucumis melo OX=3656 GN=LOC103491423 PE=4 SV...	[more]
A0A0A0KEE9	3.3e-91	87.18	NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G425720 PE=4 SV...	[more]
A0A6J1JXZ0	1.3e-87	85.26	NAC domain-containing protein 90 OS=Cucurbita maxima OX=3661 GN=LOC111490775 PE=...	[more]
A0A6J1H553	4.2e-86	85.95	NAC domain-containing protein 90 OS=Cucurbita moschata OX=3662 GN=LOC111459674 P...	[more]
A0A6J1DFI9	1.8e-84	79.49	NAC domain-containing protein 90-like OS=Momordica charantia OX=3673 GN=LOC11102...	[more]

BLAST of CcUC02G039940.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G22380.1	1.4e-62	65.00	NAC domain containing protein 90	[more]
AT3G44350.2	2.3e-60	60.66	NAC domain containing protein 61	[more]
AT3G44350.1	1.1e-51	56.28	NAC domain containing protein 61	[more]
AT2G02450.1	2.9e-31	41.57	NAC domain containing protein 35	[more]
AT2G02450.2	2.9e-31	41.57	NAC domain containing protein 35	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003441	NAC domain	PFAM	PF02365	NAM	coord: 16..146 e-value: 3.3E-28 score: 99.1
IPR003441	NAC domain	PROSITE	PS51005	NAC	coord: 14..179 score: 44.496819
IPR036093	NAC domain superfamily	GENE3D	2.170.150.80	NAC domain	coord: 23..182 e-value: 1.6E-38 score: 133.9
IPR036093	NAC domain superfamily	SUPERFAMILY	101941	NAC domain	coord: 13..178
None	No IPR available	PANTHER	PTHR31989:SF4	NAC DOMAIN-CONTAINING PROTEIN 90	coord: 14..197
None	No IPR available	PANTHER	PTHR31989	NAC DOMAIN-CONTAINING PROTEIN 82-RELATED	coord: 14..197

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CcUC02G039940	CcUC02G039940	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC02G039940.1-exon	CcUC02G039940.1-exon-CicolChr02:35237009..35237355	exon
CcUC02G039940.1-exon	CcUC02G039940.1-exon-CicolChr02:35237438..35237751	exon
CcUC02G039940.1-exon	CcUC02G039940.1-exon-CicolChr02:35237839..35238124	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC02G039940.1-five_prime_utr	CcUC02G039940.1-five_prime_utr-CicolChr02:35237009..35237171	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC02G039940.1-cds	CcUC02G039940.1-cds-CicolChr02:35237172..35237355	CDS
CcUC02G039940.1-cds	CcUC02G039940.1-cds-CicolChr02:35237438..35237751	CDS
CcUC02G039940.1-cds	CcUC02G039940.1-cds-CicolChr02:35237839..35237946	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC02G039940.1-three_prime_utr	CcUC02G039940.1-three_prime_utr-CicolChr02:35237947..35238124	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CcUC02G039940.1	CcUC02G039940.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding