CcUC02G039810.1 (mRNA) Watermelon (PI 537277) v1

Overview


Name	CcUC02G039810.1
Type	mRNA
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Ribosomal protein
Location	CicolChr02: 35106413 .. 35111254 (-)
Sequence length	1255
RNA-Seq Expression	CcUC02G039810.1
Synteny	CcUC02G039810.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTCCTCCAAATTGCTCCGATTCCGACGACTGTCTTTCCGCCGGAGAAAACGGTACGGCACCTGCAGCATCCCCTGCCGGTGGGTCCGCCGGAGATTCTAGCGGCGGTGTTGGGGTTGAGAAATTGAAGGGTTGTTGTGGGGTTCGAGAGCGGCTGAAGAGGCACCGTGAGGAGGTAGCCGGAAAAGTGACGGTGCCAGAGAAATGGGGCAAGGAGGAGCTGCTGAAGGATTGGATCGACTACTCGGCGTTCGACAGAATCTTGGCGGCCGGCAGAATTGCGTCGGCGAGGGCGTCGCTTGCGGCGGAGGGACAGAGGGCCAGTTGCCGTTCACGGCGGAGGGTAGAAAGTAGGTGTTGAAATGGGAAAAATATGTTTTAAATTGCTTTTTTATTAAGTTTAATTGACAATTGATATTAATGTTATTTATAGAAAGAGATTAAATATAAACACACGTCTTGAAAATTCAGACTTTGGGCTATGTTCTTGTGAGTGATTGATTTCATTTATATTTGTAAAACTAGAGACCCTACGAAATAATTATGTTATATTAAATTGTTGGTTGACTCAAAAGTTTGAATTAGTGAATGAAAGTAAATTTAATATGTTTATAGTTTTATTTGCTTTTACTTCTATTTATAAATTCTTTGAGTTAGTTTAATTTATCTTATTTTGGGGCATGGTTATTTGACATGTTCTTCTATTCCACATTTAAAATTGTTTAAAATATAAATTATTGTCCAATATGCTCTCGAGATGAGGCATATCTTATAATTATAATTTTTATGAATTTTATAAAGAGTGTGAGTTATGATCGTCTTTCTAATATGAGTTTTTCAACAATTAACTCGAGATGAGGTTACTTTATATTCTTTATTGTTATGATGGCGTATGGATCCATTTTTTCGGCTGAATACTAACTTGAGTTTTTTGAGAGTTGATCATGTTAGATAATCATGAAATTTCATCTCAAATTCAACTAGTAATAAGAGGGTAATTTACATGTCTCATAATGGTTGTAAGGTCTTTCTATGTTTTTTAATGTAGAATCTTCAACCGTTTTAACCCACCTACAATTATTGAACTCGAAAAAAAAAAAAATATTTGTTTGCTTGGTTTGATTTGCTATATTTCAACCTAAAAATTCACATAGCGTTTTGTCATTGGTTCATATTTTGAAAAACTTCTTTGTAAATTTTCAATTATGCGTTTAATAAATTTGTTAACATTCATTTTATTTTTATTAGGTACGCTAACTATGTATTAGGATAAGAATCACATGATGAGTTCATTTTGGGAGTATTCCGACGTAGGTCTTTTTAAAATGTAGTTTATGTACAATATAAAACATATATTATTGGTGGGATTAAGTACAATAGGAATATATTACACATGTAACCGATAATCTAGAGAATAACCCGTATGGTTGTATGATCGTATAGTTATATAGTTAAGTACTAACATAGTGATGGTGAGAGTTAAATAAATAATTTAAGTGAAAAAGTATTTTGGTTTATCGATAGATTTATTTTTATTTGGTCGTATTAATTTTATTGAATTTATGGGACTTTGGACAAAATAATAATTGTTACAATCTTGTCTCATTCATCTTCTTTAAGAGAAATTGCGAGTACTTTTCACAAAGGCATTGCATAAGAACTTAATACATTGCCATCATGCCATTTTAATATAATTGAGAGGATGAAAAAGATGTTATGTAATTTTTTTAAAAAGTGTTAAATATATAAGTTAAATTGCATAAAGGAGAGTTGAATCTAAATTTATATTTGGGTGTAAATCACGTATGACAAAATTTACCAATTTACATATTGGGTAGGTTCAAACACTATCTACCTTTTATATTTTAAGATAAACTTTAAGATTGTAAATTAATATAGATGTTCAAATTTTCATATCTTATCTATTTTATGCAAAAATTGTATACAAAATTTCAAACCTAATACTTTCAAAAAAATAAGAGTCCGTTTAACAATGTCTTTATATTGCCTCTCTATATTCCTCTTATTTTTTTTCGTTAAAAAATGTATTTTTCGTCATTGTTATTCTTATTTTGTAATACGCCTTTAAAATAGCTTTCAAATAAGGCAAAATATAAATCATCTAAAACTAGAGTGAGCTTTTAAACTAGCAAAATATAAAACCATCTCACGAACAAGTTCCCAATTCACCCATCCTTGAATTCTTGACATTGGTTTTAAATTTTAATATTCAATAAACTAGTAAATTATGAATATTCACTCAAAAAGAAAAAAAGTAAATTATGAATAAGTTTGTTTGGTTTTATTTCCCTTTCTTGAATCCACATGTCGTTTTTCTTCATCGATTGTCGTCCAGTCACAAGCCAAAGGCCCATTACACAACACTTTGGGCCAACAAACGAGCCCAATCCCAACTCGAAAATAAAGGCCTGAGCCCACGGCTGTCGCAAAACTGCATAACCTAGGTTTATCCTTAGCCCTTCTTGCTGGATCGCCTCTCTTCGGTCTTCCATTATATATCTATTCTCAGTTTAGCCGTCGAAAAACCCTAGCCTCGCGTCTTCTCCCAAGGTACACATCCATCCTTGTTCTTTCCAACCTAAGTTTATTTTGTTGAAACTGCTACTCAATTCTCTATCCTTGAAGCATTTTTCTTGCTCTTTCTTCTTCCTTCCATCTCATTTTCAGTTCTTGTTTCTCTGTATTTTTCTTTCTTGCTTGCGCCATCGATTTGGTTCCATTAGTTTGTTAAATTTTGGTTTATCGTTTTTGTTTTCTTCTCACCAGTCTGTAGCTTCTCCTTAGGAAAGACGAAGCTCCGAAAATGAGGTATGTAGTTTTATTTACCGCTCAGATTCTACTTTTCGAAACGAACATGATTACTGTTTCTGTTGTTTTTATTCAATTTTCCGGATTCATAAAATTAGTTCCTGTTGTTTATACCTGCCAGTAATCTAAATCTTTGATTTGAGGTGGATTTGGAAGTGTGAAGTTGGTACTGCCGGAATTTATTTAGGGTTTATAGTTTTACCAACAGGGGAGTTAGAGTATTTGTTTGTGCGTTTATACTGAAATAAAATCTTGCTTTTTGGAGGCCCTGGTTGCTGATTGGGTTCTTGGCATTTACTGAATGAAGTTTTGTTGGTTTGAATCTGCAGCAAACTTCAGAGCGATGCTTTGAGAGAAGCCATTTCATCTATCTTCGCTGATAGCAGTGAAAAGAAGCGCAACTTTACTGAGACCATTGAACTTCAGATTGGACTGAAGAACTATGATCCACAAAAGGACAAGCGTTTCAGTGGATCAGTGAAGTTGCCCCATATCCCTCGCCCTAAGATGAAGATTTGCATGCTTGGAGATGCCTCTCACGTTGAAGAGGTAAACTTAATCTCCTCTTAACATCATCACTTGTCATGTTCGGTAAATGTTGTCCTTGAAGAAATGACTGCTAGTTTGTATGTTGCTTGCTGGTTGGAGTTTGGGGTACGATGTTGTGTTTATGTTATGTATGAAAAATCTTAATGGTAGTAACATTTGGTTAAAGTTTATAGTTTGCATCATTCTCTATTTGTGTTTTAATGTTGAACGGATATGGTGCTGAATTCTTCATTTATAGTATTAGTGAGTTTGTACTTGTCTTGGACAATATTGTACTTTATTTGCATTTCACACACGGTTTATTGTAATTAAAGGCTGTTATGCTTCAGCTCTGGTCTTCTGCTGAATGTGTGTGTGCTTATTATAGGCAGAGAAAATCGGTTTGGATTATATGGACGTTGAAGGTCTGAAGAAGCTAAACAAAAACAAGAAGTTGGTGAAGAAACTTGCCAAGAAGTATCATGCCTTTTTAGCATCTGAAGCTATTATTAAGCAAATTCCCCGTCTTCTGGGCCCTGGGCTCAACAAGGCAGGCAAGTATGCTTATGACTAATAGACATCTGGATTTTACCCTTGTTCTGGTGACTCAAGTTAGAAAGCTTTTCTTAGCTCCTATCGATTGTTGTTGTTTACAGTGGTGATGCTAGCAAATGTTATAACTTGATACTTCATTTTCTACTTTCTGTTTTAGCTTATCATTGGCTGCACACTTGAATTTTGAATTGCAAATTCTTTCTTTGAAGGAAGCAAACTGTTTTGTTTGTAGAACCTAGTGCGTACTAACATTGACATTGACGTTGTCATTACAGGGAAGTTCCCTACCCTGGTCACTCACCAAGAATCTCTCGAATCTAAAGTAAATGAGACTAAGGCAATGGTTAAGTTCCAATTGAAGAAGGTTCTTTGTATGGGTGTGGCCGTAGGCAATGTGGCCATGGAAGAGAAACAAGTTTTCCAGAACGTTCAAATGAGTGTCAATTTCCTTGTTTCCTTGTTGAAAAAGAATTGGCAAAATGTAAGTCACGGGCCATATTTTTCCACAATGTTATTTTTAGTTCGGTTTTCTATTTACCTGCCAAGCGAACTCAAGACTTGTCTTATTTCATGACTAACACAATCTAGAATGCTCTCTACACTTAATGAAGCATTGCCCTTTTATCTAATAATAGTATGATGTTTGTTGTTCATCAGGTGAGGTGCTTGTACCTGAAGAGTACAATGGGGAAGGCATATCGAGTCTTCTGAGGAATTTTCATAACTTAGATAGTAATGTTTGTTCTTACATTGAAGAACCAAGTTGAGATGAAATTCTATATTTATGATTGATGAAAAATTTTCCTGCTTGTTTTTTTTGTTCAGTAAAAACCATTTAGCTGCACAATCGTTAACATTGTGATGGGAGTAATGTGTTTTTTTTGTTCACTTTCTTGTTACACTTTACATGTTTTATAGATTTATTTCG

mRNA sequence

ATGATTCCTCCAAATTGCTCCGATTCCGACGACTGTCTTTCCGCCGGAGAAAACGGTACGGCACCTGCAGCATCCCCTGCCGGTGGGTCCGCCGGAGATTCTAGCGGCGGTGTTGGGGTTGAGAAATTGAAGGGTTGTTGTGGGGTTCGAGAGCGGCTGAAGAGGCACCGTGAGGAGGTAGCCGGAAAAGTGACGGTGCCAGAGAAATGGGGCAAGGAGGAGCTGCTGAAGGATTGGATCGACTACTCGGCGTTCGACAGAATCTTGGCGGCCGGCAGAATTGCGTCGGCGAGGGCGTCGCTTGCGGCGGAGGGACAGAGGGCCAGTTGCCGTTCACGGCGGAGGCTTCTCCTTAGGAAAGACGAAGCTCCGAAAATGAGCAAACTTCAGAGCGATGCTTTGAGAGAAGCCATTTCATCTATCTTCGCTGATAGCAGTGAAAAGAAGCGCAACTTTACTGAGACCATTGAACTTCAGATTGGACTGAAGAACTATGATCCACAAAAGGACAAGCGTTTCAGTGGATCAGTGAAGTTGCCCCATATCCCTCGCCCTAAGATGAAGATTTGCATGCTTGGAGATGCCTCTCACGTTGAAGAGGCAGAGAAAATCGGTTTGGATTATATGGACGTTGAAGGTCTGAAGAAGCTAAACAAAAACAAGAAGTTGGTGAAGAAACTTGCCAAGAAGTATCATGCCTTTTTAGCATCTGAAGCTATTATTAAGCAAATTCCCCGTCTTCTGGGCCCTGGGCTCAACAAGGCAGGCAAGTATGCTTGGAAGTTCCCTACCCTGGTCACTCACCAAGAATCTCTCGAATCTAAAGTAAATGAGACTAAGGCAATGGTTAAGTTCCAATTGAAGAAGGTTCTTTGTATGGGTGTGGCCGTAGGCAATGTGGCCATGGAAGAGAAACAAGTTTTCCAGAACGTTCAAATGAGTGTCAATTTCCTTGTTTCCTTGTTGAAAAAGAATTGGCAAAATGTGAGGTGCTTGTACCTGAAGAGTACAATGGGGAAGGCATATCGAGTCTTCTGAGGAATTTTCATAACTTAGATAGTAATGTTTGTTCTTACATTGAAGAACCAAGTTGAGATGAAATTCTATATTTATGATTGATGAAAAATTTTCCTGCTTGTTTTTTTTGTTCAGTAAAAACCATTTAGCTGCACAATCGTTAACATTGTGATGGGAGTAATGTGTTTTTTTTGTTCACTTTCTTGTTACACTTTACATGTTTTATAGATTTATTTCG

Coding sequence (CDS)

ATGATTCCTCCAAATTGCTCCGATTCCGACGACTGTCTTTCCGCCGGAGAAAACGGTACGGCACCTGCAGCATCCCCTGCCGGTGGGTCCGCCGGAGATTCTAGCGGCGGTGTTGGGGTTGAGAAATTGAAGGGTTGTTGTGGGGTTCGAGAGCGGCTGAAGAGGCACCGTGAGGAGGTAGCCGGAAAAGTGACGGTGCCAGAGAAATGGGGCAAGGAGGAGCTGCTGAAGGATTGGATCGACTACTCGGCGTTCGACAGAATCTTGGCGGCCGGCAGAATTGCGTCGGCGAGGGCGTCGCTTGCGGCGGAGGGACAGAGGGCCAGTTGCCGTTCACGGCGGAGGCTTCTCCTTAGGAAAGACGAAGCTCCGAAAATGAGCAAACTTCAGAGCGATGCTTTGAGAGAAGCCATTTCATCTATCTTCGCTGATAGCAGTGAAAAGAAGCGCAACTTTACTGAGACCATTGAACTTCAGATTGGACTGAAGAACTATGATCCACAAAAGGACAAGCGTTTCAGTGGATCAGTGAAGTTGCCCCATATCCCTCGCCCTAAGATGAAGATTTGCATGCTTGGAGATGCCTCTCACGTTGAAGAGGCAGAGAAAATCGGTTTGGATTATATGGACGTTGAAGGTCTGAAGAAGCTAAACAAAAACAAGAAGTTGGTGAAGAAACTTGCCAAGAAGTATCATGCCTTTTTAGCATCTGAAGCTATTATTAAGCAAATTCCCCGTCTTCTGGGCCCTGGGCTCAACAAGGCAGGCAAGTATGCTTGGAAGTTCCCTACCCTGGTCACTCACCAAGAATCTCTCGAATCTAAAGTAAATGAGACTAAGGCAATGGTTAAGTTCCAATTGAAGAAGGTTCTTTGTATGGGTGTGGCCGTAGGCAATGTGGCCATGGAAGAGAAACAAGTTTTCCAGAACGTTCAAATGAGTGTCAATTTCCTTGTTTCCTTGTTGAAAAAGAATTGGCAAAATGTGAGGTGCTTGTACCTGAAGAGTACAATGGGGAAGGCATATCGAGTCTTCTGA

Protein sequence

MIPPNCSDSDDCLSAGENGTAPAASPAGGSAGDSSGGVGVEKLKGCCGVRERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAAGRIASARASLAAEGQRASCRSRRRLLLRKDEAPKMSKLQSDALREAISSIFADSSEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIPRLLGPGLNKAGKYAWKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF

Homology

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BLAST of CcUC02G039810.1 vs. NCBI nr
Match: KAG6570486.1 (Protein HIRA, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 571.2 bits (1471), Expect = 5.9e-159
Identity = 308/343 (89.80%), Postives = 314/343 (91.55%), Query Frame = 0


Query: 1   MIPPNCSDSDDCLSAGENGTAPAASPAGGSAGDSSGGVGVEKLKGCCGVRERLKRHREEV 60
           M+PPN SDS D LS G N T PAA+P  GS GDSSG  G EKLKGCCG RERLKRHREEV
Sbjct: 1   MVPPNRSDSGDRLSTGINST-PAAAPVDGSPGDSSG--GAEKLKGCCGFRERLKRHREEV 60

Query: 61  AGKVTVPEKWGKEELLKDWIDYSAFDRILAAGRIASARASLAAEGQRASCRSRRRLLLRK 120
           AGKVTVPEKWGKEELLKDWIDYSAFDRILAAGRIASARASL AEG        RRLLLR+
Sbjct: 61  AGKVTVPEKWGKEELLKDWIDYSAFDRILAAGRIASARASLVAEG--------RRLLLRE 120

Query: 121 DEAPKMSKLQSDALREAISSIFADSSEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLP 180
           D+APKMSKLQS+ALREAISSIF DSSEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLP
Sbjct: 121 DKAPKMSKLQSEALREAISSIFGDSSEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLP 180

Query: 181 HIPRPKMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAI 240
           HIPRPKMKICMLGDA HVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEA+
Sbjct: 181 HIPRPKMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAV 240

Query: 241 IKQIPRLLGPGLNKAGKYAWKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNV 300
           IKQIPRLLGPGLNKAG    KFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNV
Sbjct: 241 IKQIPRLLGPGLNKAG----KFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNV 300

Query: 301 AMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYR 344
           AMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYR
Sbjct: 301 AMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYR 328

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BLAST of CcUC02G039810.1 vs. NCBI nr
Match: KAG7010351.1 (60S ribosomal protein L10a, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 486.9 bits (1252), Expect = 1.5e-133
Identity = 271/351 (77.21%), Postives = 288/351 (82.05%), Query Frame = 0


Query: 1   MIPPNCSDSDDCLSAGENGTAPAASPAGGSAGDSSGGVGVEKLKGCCGVRERLKRHREEV 60
           M+PPN SDS D LS G N T PAA+P  GS GDSSG  G EK KGCCG RERLKRHREEV
Sbjct: 1   MVPPNRSDSGDRLSTGINST-PAAAPVDGSPGDSSG--GAEKFKGCCGFRERLKRHREEV 60

Query: 61  AGKVTVPEKWGKEELLKDWIDYSAFDRILAAGRIASARASLAAEGQRASCRSRRRLLLRK 120
           AGKVTVPEKWGKEELLKDWIDYSAFDRILAAGRIASARASL AEG+R    SR+ +   +
Sbjct: 61  AGKVTVPEKWGKEELLKDWIDYSAFDRILAAGRIASARASLVAEGRRV--ESRQFVAAAQ 120

Query: 121 DEAPKMSKLQSDALREAISSIFADSSEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLP 180
                 ++LQS+ALREAISSIF DSSEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLP
Sbjct: 121 GRQGSENELQSEALREAISSIFGDSSEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLP 180

Query: 181 HIPRPKMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHA----FLA 240
           HIPRPKMKICMLGDA HVEEAEKIGLDYMDVEGLKKLNKNKKL        H+    +L 
Sbjct: 181 HIPRPKMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLASVFMTTSHSEFTLYLV 240

Query: 241 SEA--IIKQIPRLLGPGLNKAGKYAWKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMG 300
           ++   +      L+   ++     A KFPTLVTHQESLESKVNETKAMVKFQLKKVLCMG
Sbjct: 241 TQVWKLFLAFSDLVRTNMDICIDIAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMG 300

Query: 301 VAVGNVAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 346
           VAVGNVAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF
Sbjct: 301 VAVGNVAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 346

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BLAST of CcUC02G039810.1 vs. NCBI nr
Match: KAG7035940.1 (60S ribosomal protein L10a, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 484.2 bits (1245), Expect = 9.5e-133
Identity = 270/365 (73.97%), Postives = 281/365 (76.99%), Query Frame = 0


Query: 47  CGVRERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAAGRIASARASLAAEGQ 106
           CGVRERLKRH EEVAGKV VPEKWGKEELLKDWIDYS FDRIL A RIASARASL AEG+
Sbjct: 23  CGVRERLKRHCEEVAGKVMVPEKWGKEELLKDWIDYSTFDRILTADRIASARASLVAEGR 82

Query: 107 RASCRSRRRLLLRKDE-APKM--------------------------------------- 166
           R+S RS  R  LR +  +P++                                       
Sbjct: 83  RSSPRSSSRSPLRVESLSPRLLFGSHLFGRPLYIYCQLPSKNPSLASSHQNTILISASAA 142

Query: 167 --------------------------SKLQSDALREAISSIFADSSEKKRNFTETIELQI 226
                                     SKLQS+ALREAISSIF DS+EKKRNFTETIELQI
Sbjct: 143 VYVKYAVAINLVRVLFSWKIWKYGVASKLQSEALREAISSIFGDSTEKKRNFTETIELQI 202

Query: 227 GLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKN 286
           GLKNYDPQKDKRFSGSVKLPHIPRPKMK+CMLGDA HVEEAEKIG+DYMDVEGLKKLNKN
Sbjct: 203 GLKNYDPQKDKRFSGSVKLPHIPRPKMKLCMLGDALHVEEAEKIGMDYMDVEGLKKLNKN 262

Query: 287 KKLVKKLAKKYHAFLASEAIIKQIPRLLGPGLNKAGKYAWKFPTLVTHQESLESKVNETK 346
           KKLVKKLAKKYHAFLASEA+IKQIPRLLGPGLNKAGK   KFPTLVTHQESLESKVNETK
Sbjct: 263 KKLVKKLAKKYHAFLASEAVIKQIPRLLGPGLNKAGK--CKFPTLVTHQESLESKVNETK 322

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BLAST of CcUC02G039810.1 vs. NCBI nr
Match: KAF2321621.1 (hypothetical protein GH714_000675 [Hevea brasiliensis])

HSP 1 Score: 444.5 bits (1142), Expect = 8.3e-121
Identity = 234/298 (78.52%), Postives = 256/298 (85.91%), Query Frame = 0


Query: 48  GVRERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAAGRIASARASLAAEGQR 107
           G RERLKRHREEVAGKV +P+ W +E  L DWIDYS+FD++LAA  IASAR +L A+G+R
Sbjct: 89  GGRERLKRHREEVAGKVMIPDAWNQENFLMDWIDYSSFDKLLAANGIASAREALMAQGRR 148

Query: 108 ASCRSRRRLLLRKDEAPKMSKLQSDALREAISSIFADSSEKKRNFTETIELQIGLKNYDP 167
               S+R  +       + SKLQS+ALREAIS+I   S EKKRNFTETIELQIGLKNYDP
Sbjct: 149 GRASSQRLRI-------ESSKLQSEALREAISTIMTASKEKKRNFTETIELQIGLKNYDP 208

Query: 168 QKDKRFSGSVKLPHIPRPKMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKL 227
           QKDKRFSGSVKLPHIPRPKMKICMLGDA HVEEAE IGL +MDVE LKKLNKNKKLVKKL
Sbjct: 209 QKDKRFSGSVKLPHIPRPKMKICMLGDAQHVEEAEGIGLQWMDVEALKKLNKNKKLVKKL 268

Query: 228 AKKYHAFLASEAIIKQIPRLLGPGLNKAGKYAWKFPTLVTHQESLESKVNETKAMVKFQL 287
           AK+YHAFLASE++IKQIPRLLGPGLNKAG    KFPTLVTHQESLESKVNETKA VKFQL
Sbjct: 269 AKQYHAFLASESVIKQIPRLLGPGLNKAG----KFPTLVTHQESLESKVNETKATVKFQL 328

Query: 288 KKVLCMGVAVGNVAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 346
           KKVLCMGVAVGN AMEEKQVFQNVQMSVNFLVSLLKKNWQNV+CL+LK+TMG   R+F
Sbjct: 329 KKVLCMGVAVGNCAMEEKQVFQNVQMSVNFLVSLLKKNWQNVKCLHLKTTMGAPQRIF 375

[Close]

BLAST of CcUC02G039810.1 vs. NCBI nr
Match: KAB2028213.1 (hypothetical protein ES319_D05G083700v1, partial [Gossypium barbadense])

HSP 1 Score: 431.0 bits (1107), Expect = 9.5e-117
Identity = 232/296 (78.38%), Postives = 252/296 (85.14%), Query Frame = 0


Query: 50  RERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAAGRIASARASLAAEGQRAS 109
           RERLKRHREEVAG+V VP+KWGKEELLKDW+DYS+FD +LA   +ASAR +L  EG+R+S
Sbjct: 26  RERLKRHREEVAGRVLVPDKWGKEELLKDWMDYSSFDSLLAPTGLASARKALMTEGRRSS 85

Query: 110 CRSRRRLLLRKDEAPKMSKLQSDALREAISSIFADSSEKKRNFTETIELQIGLKNYDPQK 169
             S+R + ++       SKLQSDALREAIS+I A S EK+R FTETIELQIGLKNYDPQK
Sbjct: 86  --SQRLMRIQNFGILIYSKLQSDALREAISTIVAQSKEKQRKFTETIELQIGLKNYDPQK 145

Query: 170 DKRFSGSVKLPHIPRPKMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAK 229
           DKRFSGSVKLPHIPRPKMKICMLGDA HVEE               KLNKNKKLVKKLAK
Sbjct: 146 DKRFSGSVKLPHIPRPKMKICMLGDAQHVEE---------------KLNKNKKLVKKLAK 205

Query: 230 KYHAFLASEAIIKQIPRLLGPGLNKAGKYAWKFPTLVTHQESLESKVNETKAMVKFQLKK 289
           KYHAFLASE++IKQIPRLLGPGLNKAGK   KFPTLVTHQESLESKVNETKAMVKFQLKK
Sbjct: 206 KYHAFLASESVIKQIPRLLGPGLNKAGK-CCKFPTLVTHQESLESKVNETKAMVKFQLKK 265

Query: 290 VLCMGVAVGNVAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 346
           VLCMGVAVGNVAMEEKQ+FQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMG + R+F
Sbjct: 266 VLCMGVAVGNVAMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 303

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BLAST of CcUC02G039810.1 vs. ExPASy Swiss-Prot
Match: B8B9K6 (60S ribosomal protein L10a OS=Oryza sativa subsp. indica OX=39946 GN=RPL10A PE=3 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 8.1e-103
Identity = 191/220 (86.82%), Postives = 203/220 (92.27%), Query Frame = 0


Query: 126 MSKLQSDALREAISSIFADSSEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 185
           MSKLQS+ L+EAIS +  +S EK R FTET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEVLKEAISQVVGESKEKGRKFTETVELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 186 KMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIP 245
           KMK+CMLGDA HVEEAEKIGLDYMDVE LKK+NKNKKLVKKLAKKYHAFLASEAIIKQIP
Sbjct: 61  KMKVCMLGDAQHVEEAEKIGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIP 120

Query: 246 RLLGPGLNKAGKYAWKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEK 305
           RLLGPGLNKAG    KFPTLVTHQESLESKVNETKA VKFQLKKVLCMGVAVGN++MEEK
Sbjct: 121 RLLGPGLNKAG----KFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEK 180

Query: 306 QVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 346
           Q+ QN+QMSVNFLVSLLKKNWQNVRCLY+KSTMGK  RVF
Sbjct: 181 QIQQNIQMSVNFLVSLLKKNWQNVRCLYIKSTMGKPIRVF 216

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BLAST of CcUC02G039810.1 vs. ExPASy Swiss-Prot
Match: B7F845 (60S ribosomal protein L10a OS=Oryza sativa subsp. japonica OX=39947 GN=RPL10A PE=1 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 8.1e-103
Identity = 191/220 (86.82%), Postives = 203/220 (92.27%), Query Frame = 0


Query: 126 MSKLQSDALREAISSIFADSSEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 185
           MSKLQS+ L+EAIS +  +S EK R FTET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEVLKEAISQVVGESKEKGRKFTETVELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 186 KMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIP 245
           KMK+CMLGDA HVEEAEKIGLDYMDVE LKK+NKNKKLVKKLAKKYHAFLASEAIIKQIP
Sbjct: 61  KMKVCMLGDAQHVEEAEKIGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIP 120

Query: 246 RLLGPGLNKAGKYAWKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEK 305
           RLLGPGLNKAG    KFPTLVTHQESLESKVNETKA VKFQLKKVLCMGVAVGN++MEEK
Sbjct: 121 RLLGPGLNKAG----KFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEK 180

Query: 306 QVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 346
           Q+ QN+QMSVNFLVSLLKKNWQNVRCLY+KSTMGK  RVF
Sbjct: 181 QIQQNIQMSVNFLVSLLKKNWQNVRCLYIKSTMGKPIRVF 216

[Close]

BLAST of CcUC02G039810.1 vs. ExPASy Swiss-Prot
Match: Q8VZB9 (60S ribosomal protein L10a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL10AA PE=1 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 3.4e-101
Identity = 190/220 (86.36%), Postives = 203/220 (92.27%), Query Frame = 0


Query: 126 MSKLQSDALREAISSIFADSSEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 185
           MSKLQS+A+REAI++I   S  KKRNF ETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEAVREAITTITGKSEAKKRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 186 KMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIP 245
           KMKICMLGDA HVEEAEK+GL+ MDVE LKKLNKNKKLVKKLAKKYHAFLASE++IKQIP
Sbjct: 61  KMKICMLGDAQHVEEAEKMGLENMDVESLKKLNKNKKLVKKLAKKYHAFLASESVIKQIP 120

Query: 246 RLLGPGLNKAGKYAWKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEK 305
           RLLGPGLNKAG    KFPTLV+HQESLESKVNETKA VKFQLKKVLCMGVAVGN++MEEK
Sbjct: 121 RLLGPGLNKAG----KFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEK 180

Query: 306 QVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 346
           Q+FQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   R+F
Sbjct: 181 QIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQRIF 216

[Close]

BLAST of CcUC02G039810.1 vs. ExPASy Swiss-Prot
Match: P59231 (60S ribosomal protein L10a-3 OS=Arabidopsis thaliana OX=3702 GN=RPL10AC PE=1 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 1.7e-100
Identity = 192/221 (86.88%), Postives = 203/221 (91.86%), Query Frame = 0


Query: 126 MSKLQSDALREAISSIFADSSE-KKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPR 185
           MSKLQS+A+REAISSI     E K RNFTETIELQIGLKNYDPQKDKRFSGSVKLPH+PR
Sbjct: 1   MSKLQSEAVREAISSIITHCKETKPRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHVPR 60

Query: 186 PKMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQI 245
           PKMKICMLGDA HVEEAEKIGL+ MDVE LKKLNKNKKLVKKLAKK+HAFLASE++IKQI
Sbjct: 61  PKMKICMLGDAQHVEEAEKIGLESMDVEALKKLNKNKKLVKKLAKKFHAFLASESVIKQI 120

Query: 246 PRLLGPGLNKAGKYAWKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEE 305
           PRLLGPGLNKAG    KFPTLV+HQESLESKVNETKA VKFQLKKVLCMGVAVGN++MEE
Sbjct: 121 PRLLGPGLNKAG----KFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEE 180

Query: 306 KQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 346
           KQ+FQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   RVF
Sbjct: 181 KQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPNRVF 217

[Close]

BLAST of CcUC02G039810.1 vs. ExPASy Swiss-Prot
Match: P59230 (60S ribosomal protein L10a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL10AB PE=1 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 2.9e-100
Identity = 188/220 (85.45%), Postives = 202/220 (91.82%), Query Frame = 0


Query: 126 MSKLQSDALREAISSIFADSSEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 185
           MSKLQS+A+REAI++I   S EKKRNF ET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEAVREAITTIKGKSEEKKRNFVETVELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 186 KMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIP 245
           KMKICMLGDA HVEEAEK+GL  MDVE LKKLNKNKKLVKKLAK YHAFLASE++IKQIP
Sbjct: 61  KMKICMLGDAQHVEEAEKMGLSNMDVEALKKLNKNKKLVKKLAKSYHAFLASESVIKQIP 120

Query: 246 RLLGPGLNKAGKYAWKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEK 305
           RLLGPGLNKAG    KFPTLV+HQESLE+KVNETKA VKFQLKKVLCMGVAVGN++MEEK
Sbjct: 121 RLLGPGLNKAG----KFPTLVSHQESLEAKVNETKATVKFQLKKVLCMGVAVGNLSMEEK 180

Query: 306 QVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 346
           Q+FQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   R+F
Sbjct: 181 QLFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQRIF 216

[Close]

BLAST of CcUC02G039810.1 vs. ExPASy TrEMBL
Match: A0A6A6N623 (Ribosomal protein OS=Hevea brasiliensis OX=3981 GN=GH714_000675 PE=3 SV=1)

HSP 1 Score: 444.5 bits (1142), Expect = 4.0e-121
Identity = 234/298 (78.52%), Postives = 256/298 (85.91%), Query Frame = 0


Query: 48  GVRERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAAGRIASARASLAAEGQR 107
           G RERLKRHREEVAGKV +P+ W +E  L DWIDYS+FD++LAA  IASAR +L A+G+R
Sbjct: 89  GGRERLKRHREEVAGKVMIPDAWNQENFLMDWIDYSSFDKLLAANGIASAREALMAQGRR 148

Query: 108 ASCRSRRRLLLRKDEAPKMSKLQSDALREAISSIFADSSEKKRNFTETIELQIGLKNYDP 167
               S+R  +       + SKLQS+ALREAIS+I   S EKKRNFTETIELQIGLKNYDP
Sbjct: 149 GRASSQRLRI-------ESSKLQSEALREAISTIMTASKEKKRNFTETIELQIGLKNYDP 208

Query: 168 QKDKRFSGSVKLPHIPRPKMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKL 227
           QKDKRFSGSVKLPHIPRPKMKICMLGDA HVEEAE IGL +MDVE LKKLNKNKKLVKKL
Sbjct: 209 QKDKRFSGSVKLPHIPRPKMKICMLGDAQHVEEAEGIGLQWMDVEALKKLNKNKKLVKKL 268

Query: 228 AKKYHAFLASEAIIKQIPRLLGPGLNKAGKYAWKFPTLVTHQESLESKVNETKAMVKFQL 287
           AK+YHAFLASE++IKQIPRLLGPGLNKAG    KFPTLVTHQESLESKVNETKA VKFQL
Sbjct: 269 AKQYHAFLASESVIKQIPRLLGPGLNKAG----KFPTLVTHQESLESKVNETKATVKFQL 328

Query: 288 KKVLCMGVAVGNVAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 346
           KKVLCMGVAVGN AMEEKQVFQNVQMSVNFLVSLLKKNWQNV+CL+LK+TMG   R+F
Sbjct: 329 KKVLCMGVAVGNCAMEEKQVFQNVQMSVNFLVSLLKKNWQNVKCLHLKTTMGAPQRIF 375

[Close]

BLAST of CcUC02G039810.1 vs. ExPASy TrEMBL
Match: F6HHG2 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_06s0080g00400 PE=4 SV=1)

HSP 1 Score: 440.3 bits (1131), Expect = 7.6e-120
Identity = 239/329 (72.64%), Postives = 264/329 (80.24%), Query Frame = 0


Query: 49  VRERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAAGRIASARASLAAEGQRA 108
           VR+RL+RH  EV GKV +P+KWGKE+LLK+WIDYS+FD +LA   I  AR +L A G+ A
Sbjct: 57  VRQRLRRHWSEVGGKVLIPDKWGKEDLLKEWIDYSSFDALLAPNGIGVAREALVAAGRGA 116

Query: 109 SCRSRR---RLLLR-----KDEAPKM------------------------SKLQSDALRE 168
           S +  R   RL  R       + P +                        +KLQSDALRE
Sbjct: 117 STQGLRISSRLAARVFFISSGKKPVVDPLEGRGFKHERSVHPTWINEDAGAKLQSDALRE 176

Query: 169 AISSIFADSSEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDAS 228
           AI++I  +S EKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMK+CMLGDA 
Sbjct: 177 AITNIVNESKEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCMLGDAQ 236

Query: 229 HVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIPRLLGPGLNKAG 288
           HVEEAEKIGL+YMDVEGLKKLNKNKKLVKKLAKKYHAFLASEA+IKQIPRLLGPGLNKAG
Sbjct: 237 HVEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPRLLGPGLNKAG 296

Query: 289 KYAWKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQNVQMSVN 346
           K    FPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGN +MEEKQ+FQNVQ+SVN
Sbjct: 297 KKI--FPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNCSMEEKQIFQNVQLSVN 356

[Close]

BLAST of CcUC02G039810.1 vs. ExPASy TrEMBL
Match: A0A5J5RB30 (Uncharacterized protein (Fragment) OS=Gossypium barbadense OX=3634 GN=ES319_D05G083700v1 PE=4 SV=1)

HSP 1 Score: 431.0 bits (1107), Expect = 4.6e-117
Identity = 232/296 (78.38%), Postives = 252/296 (85.14%), Query Frame = 0


Query: 50  RERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAAGRIASARASLAAEGQRAS 109
           RERLKRHREEVAG+V VP+KWGKEELLKDW+DYS+FD +LA   +ASAR +L  EG+R+S
Sbjct: 26  RERLKRHREEVAGRVLVPDKWGKEELLKDWMDYSSFDSLLAPTGLASARKALMTEGRRSS 85

Query: 110 CRSRRRLLLRKDEAPKMSKLQSDALREAISSIFADSSEKKRNFTETIELQIGLKNYDPQK 169
             S+R + ++       SKLQSDALREAIS+I A S EK+R FTETIELQIGLKNYDPQK
Sbjct: 86  --SQRLMRIQNFGILIYSKLQSDALREAISTIVAQSKEKQRKFTETIELQIGLKNYDPQK 145

Query: 170 DKRFSGSVKLPHIPRPKMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAK 229
           DKRFSGSVKLPHIPRPKMKICMLGDA HVEE               KLNKNKKLVKKLAK
Sbjct: 146 DKRFSGSVKLPHIPRPKMKICMLGDAQHVEE---------------KLNKNKKLVKKLAK 205

Query: 230 KYHAFLASEAIIKQIPRLLGPGLNKAGKYAWKFPTLVTHQESLESKVNETKAMVKFQLKK 289
           KYHAFLASE++IKQIPRLLGPGLNKAGK   KFPTLVTHQESLESKVNETKAMVKFQLKK
Sbjct: 206 KYHAFLASESVIKQIPRLLGPGLNKAGK-CCKFPTLVTHQESLESKVNETKAMVKFQLKK 265

Query: 290 VLCMGVAVGNVAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 346
           VLCMGVAVGNVAMEEKQ+FQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMG + R+F
Sbjct: 266 VLCMGVAVGNVAMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 303

[Close]

BLAST of CcUC02G039810.1 vs. ExPASy TrEMBL
Match: A0A0A0KEW8 (Ribosomal protein OS=Cucumis sativus OX=3659 GN=Csa_6G152330 PE=3 SV=1)

HSP 1 Score: 409.5 bits (1051), Expect = 1.4e-110
Identity = 213/220 (96.82%), Postives = 214/220 (97.27%), Query Frame = 0


Query: 126 MSKLQSDALREAISSIFADSSEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 185
           MSKLQSDALREAISSIFADS EKKR FTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSDALREAISSIFADSGEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 186 KMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIP 245
           KMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIP
Sbjct: 61  KMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIP 120

Query: 246 RLLGPGLNKAGKYAWKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEK 305
           RLLGPGLNKAG    KFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGN+AMEEK
Sbjct: 121 RLLGPGLNKAG----KFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEK 180

Query: 306 QVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 346
           QVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF
Sbjct: 181 QVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 216

[Close]

BLAST of CcUC02G039810.1 vs. ExPASy TrEMBL
Match: A0A1S3C7Q8 (Ribosomal protein OS=Cucumis melo OX=3656 GN=LOC103497946 PE=3 SV=1)

HSP 1 Score: 409.5 bits (1051), Expect = 1.4e-110
Identity = 213/220 (96.82%), Postives = 214/220 (97.27%), Query Frame = 0


Query: 126 MSKLQSDALREAISSIFADSSEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 185
           MSKLQSDALREAISSIFADS EKKR FTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSDALREAISSIFADSGEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 186 KMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIP 245
           KMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIP
Sbjct: 61  KMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIP 120

Query: 246 RLLGPGLNKAGKYAWKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEK 305
           RLLGPGLNKAG    KFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGN+AMEEK
Sbjct: 121 RLLGPGLNKAG----KFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEK 180

Query: 306 QVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 346
           QVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF
Sbjct: 181 QVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 216

[Close]

BLAST of CcUC02G039810.1 vs. TAIR 10
Match: AT1G08360.1 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 369.8 bits (948), Expect = 2.4e-102
Identity = 190/220 (86.36%), Postives = 203/220 (92.27%), Query Frame = 0


Query: 126 MSKLQSDALREAISSIFADSSEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 185
           MSKLQS+A+REAI++I   S  KKRNF ETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEAVREAITTITGKSEAKKRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 186 KMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIP 245
           KMKICMLGDA HVEEAEK+GL+ MDVE LKKLNKNKKLVKKLAKKYHAFLASE++IKQIP
Sbjct: 61  KMKICMLGDAQHVEEAEKMGLENMDVESLKKLNKNKKLVKKLAKKYHAFLASESVIKQIP 120

Query: 246 RLLGPGLNKAGKYAWKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEK 305
           RLLGPGLNKAG    KFPTLV+HQESLESKVNETKA VKFQLKKVLCMGVAVGN++MEEK
Sbjct: 121 RLLGPGLNKAG----KFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEK 180

Query: 306 QVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 346
           Q+FQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   R+F
Sbjct: 181 QIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQRIF 216

[Close]

BLAST of CcUC02G039810.1 vs. TAIR 10
Match: AT5G22440.1 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 367.5 bits (942), Expect = 1.2e-101
Identity = 192/221 (86.88%), Postives = 203/221 (91.86%), Query Frame = 0


Query: 126 MSKLQSDALREAISSIFADSSE-KKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPR 185
           MSKLQS+A+REAISSI     E K RNFTETIELQIGLKNYDPQKDKRFSGSVKLPH+PR
Sbjct: 1   MSKLQSEAVREAISSIITHCKETKPRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHVPR 60

Query: 186 PKMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQI 245
           PKMKICMLGDA HVEEAEKIGL+ MDVE LKKLNKNKKLVKKLAKK+HAFLASE++IKQI
Sbjct: 61  PKMKICMLGDAQHVEEAEKIGLESMDVEALKKLNKNKKLVKKLAKKFHAFLASESVIKQI 120

Query: 246 PRLLGPGLNKAGKYAWKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEE 305
           PRLLGPGLNKAG    KFPTLV+HQESLESKVNETKA VKFQLKKVLCMGVAVGN++MEE
Sbjct: 121 PRLLGPGLNKAG----KFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEE 180

Query: 306 KQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 346
           KQ+FQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   RVF
Sbjct: 181 KQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPNRVF 217

[Close]

BLAST of CcUC02G039810.1 vs. TAIR 10
Match: AT5G22440.2 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 367.5 bits (942), Expect = 1.2e-101
Identity = 192/221 (86.88%), Postives = 203/221 (91.86%), Query Frame = 0


Query: 126 MSKLQSDALREAISSIFADSSE-KKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPR 185
           MSKLQS+A+REAISSI     E K RNFTETIELQIGLKNYDPQKDKRFSGSVKLPH+PR
Sbjct: 1   MSKLQSEAVREAISSIITHCKETKPRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHVPR 60

Query: 186 PKMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQI 245
           PKMKICMLGDA HVEEAEKIGL+ MDVE LKKLNKNKKLVKKLAKK+HAFLASE++IKQI
Sbjct: 61  PKMKICMLGDAQHVEEAEKIGLESMDVEALKKLNKNKKLVKKLAKKFHAFLASESVIKQI 120

Query: 246 PRLLGPGLNKAGKYAWKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEE 305
           PRLLGPGLNKAG    KFPTLV+HQESLESKVNETKA VKFQLKKVLCMGVAVGN++MEE
Sbjct: 121 PRLLGPGLNKAG----KFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEE 180

Query: 306 KQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 346
           KQ+FQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   RVF
Sbjct: 181 KQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPNRVF 217

[Close]

BLAST of CcUC02G039810.1 vs. TAIR 10
Match: AT2G27530.1 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 366.7 bits (940), Expect = 2.1e-101
Identity = 188/220 (85.45%), Postives = 202/220 (91.82%), Query Frame = 0


Query: 126 MSKLQSDALREAISSIFADSSEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 185
           MSKLQS+A+REAI++I   S EKKRNF ET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEAVREAITTIKGKSEEKKRNFVETVELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 186 KMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIP 245
           KMKICMLGDA HVEEAEK+GL  MDVE LKKLNKNKKLVKKLAK YHAFLASE++IKQIP
Sbjct: 61  KMKICMLGDAQHVEEAEKMGLSNMDVEALKKLNKNKKLVKKLAKSYHAFLASESVIKQIP 120

Query: 246 RLLGPGLNKAGKYAWKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEK 305
           RLLGPGLNKAG    KFPTLV+HQESLE+KVNETKA VKFQLKKVLCMGVAVGN++MEEK
Sbjct: 121 RLLGPGLNKAG----KFPTLVSHQESLEAKVNETKATVKFQLKKVLCMGVAVGNLSMEEK 180

Query: 306 QVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 346
           Q+FQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   R+F
Sbjct: 181 QLFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQRIF 216

[Close]

BLAST of CcUC02G039810.1 vs. TAIR 10
Match: AT2G27530.2 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 366.7 bits (940), Expect = 2.1e-101
Identity = 188/220 (85.45%), Postives = 202/220 (91.82%), Query Frame = 0


Query: 126 MSKLQSDALREAISSIFADSSEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 185
           MSKLQS+A+REAI++I   S EKKRNF ET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEAVREAITTIKGKSEEKKRNFVETVELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 186 KMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIP 245
           KMKICMLGDA HVEEAEK+GL  MDVE LKKLNKNKKLVKKLAK YHAFLASE++IKQIP
Sbjct: 61  KMKICMLGDAQHVEEAEKMGLSNMDVEALKKLNKNKKLVKKLAKSYHAFLASESVIKQIP 120

Query: 246 RLLGPGLNKAGKYAWKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEK 305
           RLLGPGLNKAG    KFPTLV+HQESLE+KVNETKA VKFQLKKVLCMGVAVGN++MEEK
Sbjct: 121 RLLGPGLNKAG----KFPTLVSHQESLEAKVNETKATVKFQLKKVLCMGVAVGNLSMEEK 180

Query: 306 QVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 346
           Q+FQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   R+F
Sbjct: 181 QLFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQRIF 216

The following BLAST results are available for this feature:

BLAST of CcUC02G039810.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6570486.1	5.9e-159	89.80	Protein HIRA, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7010351.1	1.5e-133	77.21	60S ribosomal protein L10a, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG7035940.1	9.5e-133	73.97	60S ribosomal protein L10a, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAF2321621.1	8.3e-121	78.52	hypothetical protein GH714_000675 [Hevea brasiliensis]	[more]
KAB2028213.1	9.5e-117	78.38	hypothetical protein ES319_D05G083700v1, partial [Gossypium barbadense]	[more]

BLAST of CcUC02G039810.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B8B9K6	8.1e-103	86.82	60S ribosomal protein L10a OS=Oryza sativa subsp. indica OX=39946 GN=RPL10A PE=3...	[more]
B7F845	8.1e-103	86.82	60S ribosomal protein L10a OS=Oryza sativa subsp. japonica OX=39947 GN=RPL10A PE...	[more]
Q8VZB9	3.4e-101	86.36	60S ribosomal protein L10a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL10AA PE=1 SV=...	[more]
P59231	1.7e-100	86.88	60S ribosomal protein L10a-3 OS=Arabidopsis thaliana OX=3702 GN=RPL10AC PE=1 SV=...	[more]
P59230	2.9e-100	85.45	60S ribosomal protein L10a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL10AB PE=1 SV=...	[more]

BLAST of CcUC02G039810.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6A6N623	4.0e-121	78.52	Ribosomal protein OS=Hevea brasiliensis OX=3981 GN=GH714_000675 PE=3 SV=1	[more]
F6HHG2	7.6e-120	72.64	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_06s0080g00400 PE=4 SV=...	[more]
A0A5J5RB30	4.6e-117	78.38	Uncharacterized protein (Fragment) OS=Gossypium barbadense OX=3634 GN=ES319_D05G...	[more]
A0A0A0KEW8	1.4e-110	96.82	Ribosomal protein OS=Cucumis sativus OX=3659 GN=Csa_6G152330 PE=3 SV=1	[more]
A0A1S3C7Q8	1.4e-110	96.82	Ribosomal protein OS=Cucumis melo OX=3656 GN=LOC103497946 PE=3 SV=1	[more]

BLAST of CcUC02G039810.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G08360.1	2.4e-102	86.36	Ribosomal protein L1p/L10e family	[more]
AT5G22440.1	1.2e-101	86.88	Ribosomal protein L1p/L10e family	[more]
AT5G22440.2	1.2e-101	86.88	Ribosomal protein L1p/L10e family	[more]
AT2G27530.1	2.1e-101	85.45	Ribosomal protein L1p/L10e family	[more]
AT2G27530.2	2.1e-101	85.45	Ribosomal protein L1p/L10e family	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.190.20		coord: 265..343 e-value: 1.5E-20 score: 75.5 coord: 126..244 e-value: 3.6E-36 score: 125.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..36
None	No IPR available	PANTHER	PTHR23105:SF164	60S RIBOSOMAL PROTEIN L10A-3	coord: 127..343
None	No IPR available	PANTHER	PTHR23105	RIBOSOMAL PROTEIN L7AE FAMILY MEMBER	coord: 127..343
IPR028364	Ribosomal protein L1/ribosomal biogenesis protein	PFAM	PF00687	Ribosomal_L1	coord: 148..339 e-value: 3.6E-41 score: 141.1
IPR028364	Ribosomal protein L1/ribosomal biogenesis protein	CDD	cd00403	Ribosomal_L1	coord: 134..344 e-value: 2.45474E-62 score: 195.866
IPR023674	Ribosomal protein L1-like	SUPERFAMILY	56808	Ribosomal protein L1	coord: 147..345

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CcUC02G039810	CcUC02G039810	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC02G039810.1-exon	CcUC02G039810.1-exon-CicolChr02:35106413..35106683	exon
CcUC02G039810.1-exon	CcUC02G039810.1-exon-CicolChr02:35106860..35107065	exon
CcUC02G039810.1-exon	CcUC02G039810.1-exon-CicolChr02:35107330..35107507	exon
CcUC02G039810.1-exon	CcUC02G039810.1-exon-CicolChr02:35107875..35108094	exon
CcUC02G039810.1-exon	CcUC02G039810.1-exon-CicolChr02:35108424..35108458	exon
CcUC02G039810.1-exon	CcUC02G039810.1-exon-CicolChr02:35110910..35111254	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC02G039810.1-three_prime_utr	CcUC02G039810.1-three_prime_utr-CicolChr02:35106413..35106629	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC02G039810.1-cds	CcUC02G039810.1-cds-CicolChr02:35106630..35106683	CDS
CcUC02G039810.1-cds	CcUC02G039810.1-cds-CicolChr02:35106860..35107065	CDS
CcUC02G039810.1-cds	CcUC02G039810.1-cds-CicolChr02:35107330..35107507	CDS
CcUC02G039810.1-cds	CcUC02G039810.1-cds-CicolChr02:35107875..35108094	CDS
CcUC02G039810.1-cds	CcUC02G039810.1-cds-CicolChr02:35108424..35108458	CDS
CcUC02G039810.1-cds	CcUC02G039810.1-cds-CicolChr02:35110910..35111254	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CcUC02G039810.1	CcUC02G039810.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0015934	large ribosomal subunit
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome