CcUC02G039300.1 (mRNA) Watermelon (PI 537277) v1

Overview


Name	CcUC02G039300.1
Type	mRNA
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	glutelin type-D 1-like
Location	CicolChr02: 34640984 .. 34641596 (-)
Sequence length	450
RNA-Seq Expression	CcUC02G039300.1
Synteny	CcUC02G039300.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATATTGATTTGACTCCTCAATTGCCAAAGAAGATCTATGACAATGATGGAGGTTCCTATTATTCTTGGTCTCCCGAGGAGCTTCCCATGCTCCATGAAGGAAACATTGGTGCCTCCAGACTCGCCCTCGAGAAGAATGGTTTCGCTCTCCCTTGTTACTCTGATTCTGCCAAGGTTGCTTATGTTCTTCAAGGTATTTTTCCAATGCAGTTTATTTTCACGTAAATTTTAAATATGTTTAGTTCTATTTTCATTGTTTATTTTAGTACGAATCTAATTGATGAGCAAAATGTTATAGGCAATGGAGTAGCCGGAATCATTCTACCAGAATCAGAGGAGAAGGTGATCCCAATCAAGAAAGGAGATGCTATCGCTCTTCCCTTCGGTGTGGGTGACGTGGTGGTTCAACAAAGAAGCCACTGATTTGGTGGTTTTGTTCTTAGGTGATACATCAAAGGCTCACAAATCGGGTGAGTTTACTGACTTCTTTCTAACGGGCGCCAATGGAATCTTCACTGGCTTCTCTGCGGAGTTCGCCAAGAGAGCTTGGGATGTGGACGAGGCGTCAGTGAAATCTTTGGTGAAAAACCAACAGGAACTGGAATTGTGA

mRNA sequence

ATGGATATTGATTTGACTCCTCAATTGCCAAAGAAGATCTATGACAATGATGGAGGTTCCTATTATTCTTGGTCTCCCGAGGAGCTTCCCATGCTCCATGAAGGAAACATTGGTGCCTCCAGACTCGCCCTCGAGAAGAATGGTTTCGCTCTCCCTTGTTACTCTGATTCTGCCAAGGTTGCTTATGTTCTTCAAGGCAATGGAGTAGCCGGAATCATTCTACCAGAATCAGAGGAGAAGGTGATCCCAATCAAGAAAGGAGATGCTATCGCTCTTCCCTTCGGTGATACATCAAAGGCTCACAAATCGGGTGAGTTTACTGACTTCTTTCTAACGGGCGCCAATGGAATCTTCACTGGCTTCTCTGCGGAGTTCGCCAAGAGAGCTTGGGATGTGGACGAGGCGTCAGTGAAATCTTTGGTGAAAAACCAACAGGAACTGGAATTGTGA

Coding sequence (CDS)

ATGGATATTGATTTGACTCCTCAATTGCCAAAGAAGATCTATGACAATGATGGAGGTTCCTATTATTCTTGGTCTCCCGAGGAGCTTCCCATGCTCCATGAAGGAAACATTGGTGCCTCCAGACTCGCCCTCGAGAAGAATGGTTTCGCTCTCCCTTGTTACTCTGATTCTGCCAAGGTTGCTTATGTTCTTCAAGGCAATGGAGTAGCCGGAATCATTCTACCAGAATCAGAGGAGAAGGTGATCCCAATCAAGAAAGGAGATGCTATCGCTCTTCCCTTCGGTGATACATCAAAGGCTCACAAATCGGGTGAGTTTACTGACTTCTTTCTAACGGGCGCCAATGGAATCTTCACTGGCTTCTCTGCGGAGTTCGCCAAGAGAGCTTGGGATGTGGACGAGGCGTCAGTGAAATCTTTGGTGAAAAACCAACAGGAACTGGAATTGTGA

Protein sequence

MDIDLTPQLPKKIYDNDGGSYYSWSPEELPMLHEGNIGASRLALEKNGFALPCYSDSAKVAYVLQGNGVAGIILPESEEKVIPIKKGDAIALPFGDTSKAHKSGEFTDFFLTGANGIFTGFSAEFAKRAWDVDEASVKSLVKNQQELEL

Homology

[Close]

BLAST of CcUC02G039300.1 vs. NCBI nr
Match: XP_004150394.1 (glutelin type-D 1 [Cucumis sativus] >KGN44409.1 hypothetical protein Csa_015780 [Cucumis sativus])

HSP 1 Score: 255.8 bits (652), Expect = 2.4e-64
Identity = 131/163 (80.37%), Postives = 137/163 (84.05%), Query Frame = 0


Query: 1   MDIDLTPQLPKKIYDNDGGSYYSWSPEELPMLHEGNIGASRLALEKNGFALPCYSDSAKV 60
           M+IDLTPQLPKKIY +DGGSYY+WSP+ELPML EGNIGAS+LALEKNGFALP YSDSAKV
Sbjct: 1   MEIDLTPQLPKKIYGSDGGSYYAWSPKELPMLREGNIGASKLALEKNGFALPRYSDSAKV 60

Query: 61  AYVLQGNGVAGIILPESEEKVIPIKKGDAIALPF-------------------GDTSKAH 120
           AYVLQGNGVAGIILPESEEKVI IKKGDAIALPF                   GDTSKAH
Sbjct: 61  AYVLQGNGVAGIILPESEEKVIAIKKGDAIALPFGVVTWWFNKEATDLVVLFLGDTSKAH 120

Query: 121 KSGEFTDFFLTGANGIFTGFSAEFAKRAWDVDEASVKSLVKNQ 145
           KSGEFTDFFLTGANGIFTGFS EF  RAWD+DEASVKSLVKNQ
Sbjct: 121 KSGEFTDFFLTGANGIFTGFSTEFVGRAWDMDEASVKSLVKNQ 163

[Close]

BLAST of CcUC02G039300.1 vs. NCBI nr
Match: XP_008461502.1 (PREDICTED: glutelin type-B 5-like [Cucumis melo] >KAA0052863.1 glutelin type-B 5-like [Cucumis melo var. makuwa] >TYK04362.1 glutelin type-B 5-like [Cucumis melo var. makuwa])

HSP 1 Score: 254.6 bits (649), Expect = 5.3e-64
Identity = 131/163 (80.37%), Postives = 136/163 (83.44%), Query Frame = 0


Query: 1   MDIDLTPQLPKKIYDNDGGSYYSWSPEELPMLHEGNIGASRLALEKNGFALPCYSDSAKV 60
           M+IDLTPQLPKKIY  DGGSYYSWSP+ELPML EGNIGAS+LALEKNGFALP YSDSAKV
Sbjct: 1   MEIDLTPQLPKKIYGGDGGSYYSWSPKELPMLREGNIGASKLALEKNGFALPRYSDSAKV 60

Query: 61  AYVLQGNGVAGIILPESEEKVIPIKKGDAIALPF-------------------GDTSKAH 120
           AYVLQG+GVAGIILPESEEKVI IKKGDAIALPF                   GDTSKAH
Sbjct: 61  AYVLQGSGVAGIILPESEEKVIAIKKGDAIALPFGVVTWWFNKEATDLVVLFLGDTSKAH 120

Query: 121 KSGEFTDFFLTGANGIFTGFSAEFAKRAWDVDEASVKSLVKNQ 145
           KSGEFTDFFLTGANGIFTGFS EF  RAWD+DEASVKSLVKNQ
Sbjct: 121 KSGEFTDFFLTGANGIFTGFSTEFVGRAWDMDEASVKSLVKNQ 163

[Close]

BLAST of CcUC02G039300.1 vs. NCBI nr
Match: XP_038897477.1 (glutelin type-D 1-like [Benincasa hispida])

HSP 1 Score: 253.8 bits (647), Expect = 9.0e-64
Identity = 129/163 (79.14%), Postives = 135/163 (82.82%), Query Frame = 0


Query: 1   MDIDLTPQLPKKIYDNDGGSYYSWSPEELPMLHEGNIGASRLALEKNGFALPCYSDSAKV 60
           MD+DLTPQLPKKIY  DGGSYY+WSP+ELPML EGNIGAS+LALEKNGFALP YSDSAKV
Sbjct: 1   MDVDLTPQLPKKIYGGDGGSYYAWSPKELPMLREGNIGASKLALEKNGFALPRYSDSAKV 60

Query: 61  AYVLQGNGVAGIILPESEEKVIPIKKGDAIALPF-------------------GDTSKAH 120
           AYVLQGNGVAGIILPE EEKVI IKKGDAIALPF                   GDTSKAH
Sbjct: 61  AYVLQGNGVAGIILPEKEEKVIAIKKGDAIALPFGVVTWWFNKEAIDLVVLFLGDTSKAH 120

Query: 121 KSGEFTDFFLTGANGIFTGFSAEFAKRAWDVDEASVKSLVKNQ 145
           KSGEFTDFFLTGANGIFTGFS EF  RAWD+DEASVK+LVKNQ
Sbjct: 121 KSGEFTDFFLTGANGIFTGFSTEFVGRAWDMDEASVKTLVKNQ 163

[Close]

BLAST of CcUC02G039300.1 vs. NCBI nr
Match: XP_023535755.1 (glutelin type-D 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 252.7 bits (644), Expect = 2.0e-63
Identity = 130/163 (79.75%), Postives = 136/163 (83.44%), Query Frame = 0


Query: 1   MDIDLTPQLPKKIYDNDGGSYYSWSPEELPMLHEGNIGASRLALEKNGFALPCYSDSAKV 60
           M+IDLTPQL KKIY +DGGSYYSWSP+ELPML EGNIGA++LALEKNGFALP YSDSAKV
Sbjct: 1   MEIDLTPQLAKKIYGSDGGSYYSWSPKELPMLREGNIGAAKLALEKNGFALPRYSDSAKV 60

Query: 61  AYVLQGNGVAGIILPESEEKVIPIKKGDAIALPF-------------------GDTSKAH 120
           AYVLQGNGVAGIILPESEEKVI IKKGDAIALPF                   GDTSKAH
Sbjct: 61  AYVLQGNGVAGIILPESEEKVIAIKKGDAIALPFGVVTWWFNKEATDLVVLFLGDTSKAH 120

Query: 121 KSGEFTDFFLTGANGIFTGFSAEFAKRAWDVDEASVKSLVKNQ 145
           KSGEFTDFFLTGANGIFTGFS EF  RAWD+DEASVKSLVKNQ
Sbjct: 121 KSGEFTDFFLTGANGIFTGFSTEFVGRAWDMDEASVKSLVKNQ 163

[Close]

BLAST of CcUC02G039300.1 vs. NCBI nr
Match: KAG6592225.1 (Glutelin type-D 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7025082.1 Glutelin type-B 5 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 252.7 bits (644), Expect = 2.0e-63
Identity = 130/163 (79.75%), Postives = 136/163 (83.44%), Query Frame = 0


Query: 1   MDIDLTPQLPKKIYDNDGGSYYSWSPEELPMLHEGNIGASRLALEKNGFALPCYSDSAKV 60
           M+IDLTPQL KKIY +DGGSYYSWSP+ELPML EGNIGA++LALEKNGFALP YSDSAKV
Sbjct: 1   MEIDLTPQLAKKIYGSDGGSYYSWSPKELPMLREGNIGAAKLALEKNGFALPRYSDSAKV 60

Query: 61  AYVLQGNGVAGIILPESEEKVIPIKKGDAIALPF-------------------GDTSKAH 120
           AYVLQGNGVAGIILPESEEKVI IKKGDAIALPF                   GDTSKAH
Sbjct: 61  AYVLQGNGVAGIILPESEEKVIAIKKGDAIALPFGVVTWWFNKEATDLVVLFLGDTSKAH 120

Query: 121 KSGEFTDFFLTGANGIFTGFSAEFAKRAWDVDEASVKSLVKNQ 145
           KSGEFTDFFLTGANGIFTGFS EF  RAWD+DEASVKSLVKNQ
Sbjct: 121 KSGEFTDFFLTGANGIFTGFSTEFVGRAWDMDEASVKSLVKNQ 163

[Close]

BLAST of CcUC02G039300.1 vs. ExPASy Swiss-Prot
Match: P05190 (Legumin type B OS=Vicia faba OX=3906 GN=LEB4 PE=3 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.0e-06
Identity = 32/119 (26.89%), Postives = 53/119 (44.54%), Query Frame = 0


Query: 10  PKKIYDNDGGSYYSWSPEELPMLHEGNIGASRLALEKNGFALPCYSDSAKVAYVLQGNGV 69
           P    +++ G   +W+P   P L    +   R  ++ NG  LP YS S ++ Y++QG GV
Sbjct: 43  PDHRVESEAGLTETWNPNH-PELRCAGVSLIRRTIDPNGLHLPSYSPSPQLIYIIQGKGV 102

Query: 70  AGIIL-----------------------PESEEKVIPIKKGDAIALPFGDTSKAHKSGE 106
            G+ L                       P+S +K+   +KGD IA+P G     + +G+
Sbjct: 103 IGLTLPGCPQTYQEPRSSQSRQGSRQQQPDSHQKIRRFRKGDIIAIPSGIPYWTYNNGD 160

[Close]

BLAST of CcUC02G039300.1 vs. ExPASy Swiss-Prot
Match: P09802 (Legumin A OS=Gossypium hirsutum OX=3635 GN=LEGA PE=2 SV=2)

HSP 1 Score: 50.8 bits (120), Expect = 1.5e-05
Identity = 29/121 (23.97%), Postives = 53/121 (43.80%), Query Frame = 0


Query: 5   LTPQLPKKIYDNDGGSYYSWSPEELPMLHEGNIGASRLALEKNGFALPCYSDSAKVAYVL 64
           L    P+    ++ G+   W+P     L    +   R  +E NG  LP ++++ ++ Y++
Sbjct: 39  LRASAPQTRIRSEAGTTEWWNP-NCQQLRCAGVSVMRQTIEPNGLVLPSFTNAPQLLYIV 98

Query: 65  QGNGVAGIILP---------------------ESEEKVIPIKKGDAIALPFGDTSKAHKS 105
           QG G+ GI++P                     +  +KV   ++GD IALP G    ++  
Sbjct: 99  QGRGIQGIVMPGCAETFQDSQQWQHQSRGRFQDQHQKVRRFRQGDIIALPQGVVHWSYND 158

[Close]

BLAST of CcUC02G039300.1 vs. ExPASy Swiss-Prot
Match: P04405 (Glycinin G2 OS=Glycine max OX=3847 GN=GY2 PE=1 SV=2)

HSP 1 Score: 50.4 bits (119), Expect = 2.0e-05
Identity = 29/108 (26.85%), Postives = 47/108 (43.52%), Query Frame = 0


Query: 10  PKKIYDNDGGSYYSWSPEELPMLHEGNIGASRLALEKNGFALPCYSDSAKVAYVLQGNGV 69
           P    +++GG   +W+P   P    G +  SR  L +N    P Y++  +  Y+ QGNG+
Sbjct: 38  PDNRIESEGGFIETWNPNNKPFQCAG-VALSRCTLNRNALRRPSYTNGPQEIYIQQGNGI 97

Query: 70  AGIILP----------------------ESEEKVIPIKKGDAIALPFG 96
            G+I P                      +  +KV   ++GD IA+P G
Sbjct: 98  FGMIFPGCPSTYQEPQESQQRGRSQRPQDRHQKVHRFREGDLIAVPTG 144

[Close]

BLAST of CcUC02G039300.1 vs. ExPASy Swiss-Prot
Match: P11828 (Glycinin G3 OS=Glycine max OX=3847 GN=GY3 PE=1 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 2.0e-05
Identity = 27/105 (25.71%), Postives = 48/105 (45.71%), Query Frame = 0


Query: 10  PKKIYDNDGGSYYSWSPEELPMLHEGNIGASRLALEKNGFALPCYSDSAKVAYVLQGNGV 69
           P    +++GG   +W+P   P    G +  SR  L +N    P Y+++ +  Y+ QG+G+
Sbjct: 41  PDNRIESEGGFIETWNPNNKPFQCAG-VALSRCTLNRNALRRPSYTNAPQEIYIQQGSGI 100

Query: 70  AGIILP-------------------ESEEKVIPIKKGDAIALPFG 96
            G+I P                   +  +K+   ++GD IA+P G
Sbjct: 101 FGMIFPGCPSTFEEPQQKGQSSRPQDRHQKIYHFREGDLIAVPTG 144

[Close]

BLAST of CcUC02G039300.1 vs. ExPASy Swiss-Prot
Match: Q8GZP6 (11S globulin seed storage protein Ana o 2.0101 (Fragment) OS=Anacardium occidentale OX=171929 PE=1 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 5.8e-05
Identity = 44/189 (23.28%), Postives = 69/189 (36.51%), Query Frame = 0


Query: 10  PKKIYDNDGGSYYSWSPEELPMLHEGNIGASRLALEKNGFALPCYSDSAKVAYVLQGNGV 69
           P    + + G+  +W P        G +   R  ++ NG  LP YS++ ++ YV+QG G+
Sbjct: 35  PDNRVEYEAGTVEAWDPNHEQFRCAG-VALVRHTIQPNGLLLPQYSNAPQLIYVVQGEGM 94

Query: 70  AGIILP----------------------ESEEKVIPIKKGDAIALPFG------------ 129
            GI  P                      +  +K+   ++GD IA+P G            
Sbjct: 95  TGISYPGCPETYQAPQQGRQQGQSGRFQDRHQKIRRFRRGDIIAIPAGVAHWCYNEGNSP 154

Query: 130 -------DTS-----------KAHKSGEFTDFF------LTGANGIFTGFSAEFAKRAWD 141
                  D S           K H +G   D F       +    +F+GF  E    A+ 
Sbjct: 155 VVTVTLLDVSNSQNQLDRTPRKFHLAGNPKDVFQQQQQHQSRGRNLFSGFDTELLAEAFQ 214

[Close]

BLAST of CcUC02G039300.1 vs. ExPASy TrEMBL
Match: A0A0A0K666 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G281380 PE=3 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 1.1e-64
Identity = 131/163 (80.37%), Postives = 137/163 (84.05%), Query Frame = 0


Query: 1   MDIDLTPQLPKKIYDNDGGSYYSWSPEELPMLHEGNIGASRLALEKNGFALPCYSDSAKV 60
           M+IDLTPQLPKKIY +DGGSYY+WSP+ELPML EGNIGAS+LALEKNGFALP YSDSAKV
Sbjct: 1   MEIDLTPQLPKKIYGSDGGSYYAWSPKELPMLREGNIGASKLALEKNGFALPRYSDSAKV 60

Query: 61  AYVLQGNGVAGIILPESEEKVIPIKKGDAIALPF-------------------GDTSKAH 120
           AYVLQGNGVAGIILPESEEKVI IKKGDAIALPF                   GDTSKAH
Sbjct: 61  AYVLQGNGVAGIILPESEEKVIAIKKGDAIALPFGVVTWWFNKEATDLVVLFLGDTSKAH 120

Query: 121 KSGEFTDFFLTGANGIFTGFSAEFAKRAWDVDEASVKSLVKNQ 145
           KSGEFTDFFLTGANGIFTGFS EF  RAWD+DEASVKSLVKNQ
Sbjct: 121 KSGEFTDFFLTGANGIFTGFSTEFVGRAWDMDEASVKSLVKNQ 163

[Close]

BLAST of CcUC02G039300.1 vs. ExPASy TrEMBL
Match: A0A5A7UAB0 (Glutelin type-B 5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold675G00320 PE=3 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 2.6e-64
Identity = 131/163 (80.37%), Postives = 136/163 (83.44%), Query Frame = 0


Query: 1   MDIDLTPQLPKKIYDNDGGSYYSWSPEELPMLHEGNIGASRLALEKNGFALPCYSDSAKV 60
           M+IDLTPQLPKKIY  DGGSYYSWSP+ELPML EGNIGAS+LALEKNGFALP YSDSAKV
Sbjct: 1   MEIDLTPQLPKKIYGGDGGSYYSWSPKELPMLREGNIGASKLALEKNGFALPRYSDSAKV 60

Query: 61  AYVLQGNGVAGIILPESEEKVIPIKKGDAIALPF-------------------GDTSKAH 120
           AYVLQG+GVAGIILPESEEKVI IKKGDAIALPF                   GDTSKAH
Sbjct: 61  AYVLQGSGVAGIILPESEEKVIAIKKGDAIALPFGVVTWWFNKEATDLVVLFLGDTSKAH 120

Query: 121 KSGEFTDFFLTGANGIFTGFSAEFAKRAWDVDEASVKSLVKNQ 145
           KSGEFTDFFLTGANGIFTGFS EF  RAWD+DEASVKSLVKNQ
Sbjct: 121 KSGEFTDFFLTGANGIFTGFSTEFVGRAWDMDEASVKSLVKNQ 163

[Close]

BLAST of CcUC02G039300.1 vs. ExPASy TrEMBL
Match: A0A1S3CG59 (glutelin type-B 5-like OS=Cucumis melo OX=3656 GN=LOC103500083 PE=3 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 2.6e-64
Identity = 131/163 (80.37%), Postives = 136/163 (83.44%), Query Frame = 0


Query: 1   MDIDLTPQLPKKIYDNDGGSYYSWSPEELPMLHEGNIGASRLALEKNGFALPCYSDSAKV 60
           M+IDLTPQLPKKIY  DGGSYYSWSP+ELPML EGNIGAS+LALEKNGFALP YSDSAKV
Sbjct: 1   MEIDLTPQLPKKIYGGDGGSYYSWSPKELPMLREGNIGASKLALEKNGFALPRYSDSAKV 60

Query: 61  AYVLQGNGVAGIILPESEEKVIPIKKGDAIALPF-------------------GDTSKAH 120
           AYVLQG+GVAGIILPESEEKVI IKKGDAIALPF                   GDTSKAH
Sbjct: 61  AYVLQGSGVAGIILPESEEKVIAIKKGDAIALPFGVVTWWFNKEATDLVVLFLGDTSKAH 120

Query: 121 KSGEFTDFFLTGANGIFTGFSAEFAKRAWDVDEASVKSLVKNQ 145
           KSGEFTDFFLTGANGIFTGFS EF  RAWD+DEASVKSLVKNQ
Sbjct: 121 KSGEFTDFFLTGANGIFTGFSTEFVGRAWDMDEASVKSLVKNQ 163

[Close]

BLAST of CcUC02G039300.1 vs. ExPASy TrEMBL
Match: A0A6J1EX25 (glutelin type-D 1-like OS=Cucurbita moschata OX=3662 GN=LOC111439037 PE=3 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 3.7e-63
Identity = 129/163 (79.14%), Postives = 136/163 (83.44%), Query Frame = 0


Query: 1   MDIDLTPQLPKKIYDNDGGSYYSWSPEELPMLHEGNIGASRLALEKNGFALPCYSDSAKV 60
           M++DLTPQL KKIY +DGGSYYSWSP+ELPML EGNIGA++LALEKNGFALP YSDSAKV
Sbjct: 1   MEMDLTPQLAKKIYVSDGGSYYSWSPKELPMLREGNIGAAKLALEKNGFALPRYSDSAKV 60

Query: 61  AYVLQGNGVAGIILPESEEKVIPIKKGDAIALPF-------------------GDTSKAH 120
           AYVLQGNGVAGIILPESEEKVI IKKGDAIALPF                   GDTSKAH
Sbjct: 61  AYVLQGNGVAGIILPESEEKVIAIKKGDAIALPFGVVTWWFNKEATDLVVLFLGDTSKAH 120

Query: 121 KSGEFTDFFLTGANGIFTGFSAEFAKRAWDVDEASVKSLVKNQ 145
           KSGEFTDFFLTGANGIFTGFS EF  RAWD+DEASVKSLVKNQ
Sbjct: 121 KSGEFTDFFLTGANGIFTGFSTEFVGRAWDMDEASVKSLVKNQ 163

[Close]

BLAST of CcUC02G039300.1 vs. ExPASy TrEMBL
Match: A0A6J1IH21 (glutelin type-D 1-like OS=Cucurbita maxima OX=3661 GN=LOC111477153 PE=3 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 1.1e-62
Identity = 129/163 (79.14%), Postives = 135/163 (82.82%), Query Frame = 0


Query: 1   MDIDLTPQLPKKIYDNDGGSYYSWSPEELPMLHEGNIGASRLALEKNGFALPCYSDSAKV 60
           M+IDLTPQL KKIY  DGGSYYSWSP+ELPML EGNIGA++LALEKNGFALP YSDSAKV
Sbjct: 1   MEIDLTPQLAKKIYGCDGGSYYSWSPKELPMLREGNIGAAKLALEKNGFALPRYSDSAKV 60

Query: 61  AYVLQGNGVAGIILPESEEKVIPIKKGDAIALPF-------------------GDTSKAH 120
           AYVLQGNGVAGIILPESEEKVI IKKGDAIALPF                   GDTSKAH
Sbjct: 61  AYVLQGNGVAGIILPESEEKVIAIKKGDAIALPFGVVTWWFNKEATDLVVLFLGDTSKAH 120

Query: 121 KSGEFTDFFLTGANGIFTGFSAEFAKRAWDVDEASVKSLVKNQ 145
           KSGEFTDFFLTGANGIFTGFS EF  RAWD+DEASVKSLVK+Q
Sbjct: 121 KSGEFTDFFLTGANGIFTGFSTEFVGRAWDMDEASVKSLVKSQ 163

[Close]

BLAST of CcUC02G039300.1 vs. TAIR 10
Match: AT1G07750.1 (RmlC-like cupins superfamily protein )

HSP 1 Score: 214.5 bits (545), Expect = 5.6e-56
Identity = 104/163 (63.80%), Postives = 126/163 (77.30%), Query Frame = 0


Query: 1   MDIDLTPQLPKKIYDNDGGSYYSWSPEELPMLHEGNIGASRLALEKNGFALPCYSDSAKV 60
           M++DLTP+LPKK+Y  DGGSY +W PEELPML +GNIGA++LALEKNGFA+P YSDS+KV
Sbjct: 1   MELDLTPKLPKKVYGGDGGSYSAWCPEELPMLKQGNIGAAKLALEKNGFAVPRYSDSSKV 60

Query: 61  AYVLQGNGVAGIILPESEEKVIPIKKGDAIALPF-------------------GDTSKAH 120
           AYVLQG+G AGI+LPE EEKVI IK+GD+IALPF                   G+T K H
Sbjct: 61  AYVLQGSGTAGIVLPEKEEKVIAIKQGDSIALPFGVVTWWFNNEDPELVILFLGETHKGH 120

Query: 121 KSGEFTDFFLTGANGIFTGFSAEFAKRAWDVDEASVKSLVKNQ 145
           K+G+FT+F+LTG NGIFTGFS EF  RAWD+DE +VK LV +Q
Sbjct: 121 KAGQFTEFYLTGTNGIFTGFSTEFVGRAWDLDENTVKKLVGSQ 163

[Close]

BLAST of CcUC02G039300.1 vs. TAIR 10
Match: AT2G28680.1 (RmlC-like cupins superfamily protein )

HSP 1 Score: 214.5 bits (545), Expect = 5.6e-56
Identity = 105/163 (64.42%), Postives = 124/163 (76.07%), Query Frame = 0


Query: 1   MDIDLTPQLPKKIYDNDGGSYYSWSPEELPMLHEGNIGASRLALEKNGFALPCYSDSAKV 60
           M++DL+P+LPKK+Y  DGGSY++W PEELPML +GNIGAS+LALEK G ALP YSDS KV
Sbjct: 1   MELDLSPRLPKKVYGGDGGSYFAWCPEELPMLRDGNIGASKLALEKYGLALPRYSDSPKV 60

Query: 61  AYVLQGNGVAGIILPESEEKVIPIKKGDAIALPF-------------------GDTSKAH 120
           AYVLQG G AGI+LPE EEKVI IKKGD+IALPF                   G+T K H
Sbjct: 61  AYVLQGAGTAGIVLPEKEEKVIAIKKGDSIALPFGVVTWWFNNEDTELVVLFLGETHKGH 120

Query: 121 KSGEFTDFFLTGANGIFTGFSAEFAKRAWDVDEASVKSLVKNQ 145
           K+G+FTDF+LTG+NGIFTGFS EF  RAWD+DE +VK LV +Q
Sbjct: 121 KAGQFTDFYLTGSNGIFTGFSTEFVGRAWDLDETTVKKLVGSQ 163

[Close]

BLAST of CcUC02G039300.1 vs. TAIR 10
Match: AT4G28520.2 (cruciferin 3 )

HSP 1 Score: 42.0 bits (97), Expect = 5.0e-04
Identity = 19/64 (29.69%), Postives = 33/64 (51.56%), Query Frame = 0


Query: 16  NDGGSYYSWSPEELPMLHEGNIGASRLALEKNGFALPCYSDSAKVAYVLQGNGVAGIILP 75
           ++ G    W     P L    +  +R  +E+ G  LP +  S K++YV+QG G++G ++P
Sbjct: 53  SEAGQIEYWDHNH-PQLRCVGVSVARYVIEQGGLYLPTFFTSPKISYVVQGTGISGRVVP 112

Query: 76  ESEE 80
              E
Sbjct: 113 GCAE 115

[Close]

BLAST of CcUC02G039300.1 vs. TAIR 10
Match: AT4G28520.1 (cruciferin 3 )

HSP 1 Score: 42.0 bits (97), Expect = 5.0e-04
Identity = 19/64 (29.69%), Postives = 33/64 (51.56%), Query Frame = 0


Query: 16  NDGGSYYSWSPEELPMLHEGNIGASRLALEKNGFALPCYSDSAKVAYVLQGNGVAGIILP 75
           ++ G    W     P L    +  +R  +E+ G  LP +  S K++YV+QG G++G ++P
Sbjct: 53  SEAGQIEYWDHNH-PQLRCVGVSVARYVIEQGGLYLPTFFTSPKISYVVQGTGISGRVVP 112

Query: 76  ESEE 80
              E
Sbjct: 113 GCAE 115

[Close]

BLAST of CcUC02G039300.1 vs. TAIR 10
Match: AT4G28520.3 (cruciferin 3 )

HSP 1 Score: 42.0 bits (97), Expect = 5.0e-04
Identity = 19/64 (29.69%), Postives = 33/64 (51.56%), Query Frame = 0


Query: 16  NDGGSYYSWSPEELPMLHEGNIGASRLALEKNGFALPCYSDSAKVAYVLQGNGVAGIILP 75
           ++ G    W     P L    +  +R  +E+ G  LP +  S K++YV+QG G++G ++P
Sbjct: 53  SEAGQIEYWDHNH-PQLRCVGVSVARYVIEQGGLYLPTFFTSPKISYVVQGTGISGRVVP 112

Query: 76  ESEE 80
              E
Sbjct: 113 GCAE 115

The following BLAST results are available for this feature:

BLAST of CcUC02G039300.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150394.1	2.4e-64	80.37	glutelin type-D 1 [Cucumis sativus] >KGN44409.1 hypothetical protein Csa_015780 ...	[more]
XP_008461502.1	5.3e-64	80.37	PREDICTED: glutelin type-B 5-like [Cucumis melo] >KAA0052863.1 glutelin type-B 5...	[more]
XP_038897477.1	9.0e-64	79.14	glutelin type-D 1-like [Benincasa hispida]	[more]
XP_023535755.1	2.0e-63	79.75	glutelin type-D 1-like [Cucurbita pepo subsp. pepo]	[more]
KAG6592225.1	2.0e-63	79.75	Glutelin type-D 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7025082.1...	[more]

BLAST of CcUC02G039300.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P05190	1.0e-06	26.89	Legumin type B OS=Vicia faba OX=3906 GN=LEB4 PE=3 SV=1	[more]
P09802	1.5e-05	23.97	Legumin A OS=Gossypium hirsutum OX=3635 GN=LEGA PE=2 SV=2	[more]
P04405	2.0e-05	26.85	Glycinin G2 OS=Glycine max OX=3847 GN=GY2 PE=1 SV=2	[more]
P11828	2.0e-05	25.71	Glycinin G3 OS=Glycine max OX=3847 GN=GY3 PE=1 SV=1	[more]
Q8GZP6	5.8e-05	23.28	11S globulin seed storage protein Ana o 2.0101 (Fragment) OS=Anacardium occident...	[more]

BLAST of CcUC02G039300.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K666	1.1e-64	80.37	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G281380 PE=3 SV=1	[more]
A0A5A7UAB0	2.6e-64	80.37	Glutelin type-B 5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold6...	[more]
A0A1S3CG59	2.6e-64	80.37	glutelin type-B 5-like OS=Cucumis melo OX=3656 GN=LOC103500083 PE=3 SV=1	[more]
A0A6J1EX25	3.7e-63	79.14	glutelin type-D 1-like OS=Cucurbita moschata OX=3662 GN=LOC111439037 PE=3 SV=1	[more]
A0A6J1IH21	1.1e-62	79.14	glutelin type-D 1-like OS=Cucurbita maxima OX=3661 GN=LOC111477153 PE=3 SV=1	[more]

BLAST of CcUC02G039300.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07750.1	5.6e-56	63.80	RmlC-like cupins superfamily protein	[more]
AT2G28680.1	5.6e-56	64.42	RmlC-like cupins superfamily protein	[more]
AT4G28520.2	5.0e-04	29.69	cruciferin 3	[more]
AT4G28520.1	5.0e-04	29.69	cruciferin 3	[more]
AT4G28520.3	5.0e-04	29.69	cruciferin 3	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006045	Cupin 1	SMART	SM00835	Cupin_1_3	coord: 3..138 e-value: 1.2E-18 score: 77.9
IPR006045	Cupin 1	PFAM	PF00190	Cupin_1	coord: 9..95 e-value: 1.7E-18 score: 66.6
IPR014710	RmlC-like jelly roll fold	GENE3D	2.60.120.10	Jelly Rolls	coord: 10..148 e-value: 1.8E-24 score: 88.0
None	No IPR available	PANTHER	PTHR31189	OS03G0336100 PROTEIN-RELATED	coord: 95..142
None	No IPR available	PANTHER	PTHR31189:SF51	SUBFAMILY NOT NAMED	coord: 2..95
None	No IPR available	PANTHER	PTHR31189	OS03G0336100 PROTEIN-RELATED	coord: 2..95
None	No IPR available	PANTHER	PTHR31189:SF51	SUBFAMILY NOT NAMED	coord: 95..142
None	No IPR available	CDD	cd02242	cupin_11S_legumin_N	coord: 4..146 e-value: 3.35097E-53 score: 165.451
IPR011051	RmlC-like cupin domain superfamily	SUPERFAMILY	51182	RmlC-like cupins	coord: 7..146

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CcUC02G039300	CcUC02G039300	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC02G039300.1-exon	CcUC02G039300.1-exon-CicolChr02:34640984..34641150	exon
CcUC02G039300.1-exon	CcUC02G039300.1-exon-CicolChr02:34641209..34641295	exon
CcUC02G039300.1-exon	CcUC02G039300.1-exon-CicolChr02:34641401..34641596	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC02G039300.1-cds	CcUC02G039300.1-cds-CicolChr02:34640984..34641150	CDS
CcUC02G039300.1-cds	CcUC02G039300.1-cds-CicolChr02:34641209..34641295	CDS
CcUC02G039300.1-cds	CcUC02G039300.1-cds-CicolChr02:34641401..34641596	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CcUC02G039300.1	CcUC02G039300.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010431	seed maturation
molecular_function	GO:0045735	nutrient reservoir activity