Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. ATGTGTAAGTACTGGTTGGCGATTTTTAAAGAAATTTTTTGAAACCTTTCGGATTCTCTAATCTGAGAAGAAAATGGTTGGGGTTTGGATTGATTTTGTTAAGCGCTTTTTATAAAAGCTGTTTGGGATGGGTCCTTGAGGTTAGAGGTTTTTCATTACTGATAATGGATAAGGCTTTATTATTTATTTCACTACGTTGTAAGTTCGAATTTACCAAAAACCCCTTCCTGCGATTTTCATGGAAATGACACGTCGGATATTTCAATTTATCCACTCAAAACGTTCTTTTTTTCTCTTTTTTTTTTTCCATTTGCGAGGATTCAGTGAATCGCACCCCATGATAATCGGGAAAGACAGTTCGTCGGTGTCAACCGTCATGGAAAGGAATGGCGCCGATGGCTGCCACGTATGAGACAGAGATGAAGACTAGCCATTGGGATACGCCACTGGGAAAGGGCATTATGGGAAGAGGAAAATGGCTGGAGTCAAGTTTTGTCGCGACGTGGGTGGGGCATTGAAGACTTAAGGTTTGGATAAAGAAGAAAGTTAAAATAGGACATAGCAAGGGAGATTCTTAAATAAAAATATTTTTGGTGCATTTTAGTAATATCTATCTTTAATTTAATTATAATTTGAGATGTGACAATTTTTTAAAAAAATTTATTCTTTCCATGTAAAATGGAGTTGATAAGAAGACGTCCGTGCTAAAAAAATCTCTCGTAGAAACACAAAAATTTACACAAAAGATTTCAAATTCGGAAAAAGACTATGACCCACCAAAAGAAATTTATCATATAAAATTTGTTACAGTTACATATAATAATTCTCTCTCCAATTTCCAAAATTTTTGCATGACTCACGCTCTTTTTTCATTCTCAAATTAAAGAATATATCATGAATTTAACTAAAGTGAGAACATTCAAACTTAAGTATTTTTTATCATGATAATTTGAAGCCGAAGTCACGAGCTTCTTGTATAGTACTTGTGGAGTTTTTCGGTGTCATTTAATACTTTTTGTAAAAGTAAAGAAGTGTGCAATATGAACAAATAAGAATAATTGGTGGTGTTTTTTTAATGTATTTCAGAGAACTAAAGAAAGAAAAGAGAGGAGTGAGAAGAGAGAAGATAATTGGGTGGAAAAAGAGGACGCGTGGCGAGATTGTGTTGCAGGCAATGGAAGAAGTATGATTGCACGTGAAGTAGGCCCCACGCTTGGATCTCGTGCGTTTGCTTGCCAGCTGGCCTAGTTCCGCTCTTGTCCTCTCACAAGCGACACCTCAAAAACTCTCTTCCATTTTCCAATATCTCTTCCTTTCCCTTTAATCTCGCGATAAATTCTTCCTCATACCCTAATGTACATTATGG mRNA sequence ATGTGTAAGTACTGTGAATCGCACCCCATGATAATCGGGAAAGACAGTTCGTCGGTGTCAACCGTCATGGAAAGGAATGGCGCCGATGGCTGCCACAGAACTAAAGAAAGAAAAGAGAGGAGTGAGAAGAGAGAAGATAATTGGGTGGAAAAAGAGGACGCGTGGCGAGATTGTGTTGCAGGCAATGGAAGAAGTATGATTGCACGTGAAGTAGGCCCCACGCTTGGATCTCGTGCGTTTGCTTGCCAGCTGGCCTAGTTCCGCTCTTGTCCTCTCACAAGCGACACCTCAAAAACTCTCTTCCATTTTCCAATATCTCTTCCTTTCCCTTTAATCTCGCGATAAATTCTTCCTCATACCCTAATGTACATTATGG Coding sequence (CDS) ATGTGTAAGTACTGTGAATCGCACCCCATGATAATCGGGAAAGACAGTTCGTCGGTGTCAACCGTCATGGAAAGGAATGGCGCCGATGGCTGCCACAGAACTAAAGAAAGAAAAGAGAGGAGTGAGAAGAGAGAAGATAATTGGGTGGAAAAAGAGGACGCGTGGCGAGATTGTGTTGCAGGCAATGGAAGAAGTATGATTGCACGTGAAGTAGGCCCCACGCTTGGATCTCGTGCGTTTGCTTGCCAGCTGGCCTAG Protein sequence MCKYCESHPMIIGKDSSSVSTVMERNGADGCHRTKERKERSEKREDNWVEKEDAWRDCVAGNGRSMIAREVGPTLGSRAFACQLA
Homology
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 28..46 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 22..46 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| CcUC02G038810.1-exon | CcUC02G038810.1-exon-CicolChr02:34180401..34180680 | exon |
| CcUC02G038810.1-exon | CcUC02G038810.1-exon-CicolChr02:34181361..34181442 | exon |
| CcUC02G038810.1-exon | CcUC02G038810.1-exon-CicolChr02:34181753..34181766 | exon |
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| CcUC02G038810.1-three_prime_utr | CcUC02G038810.1-three_prime_utr-CicolChr02:34180401..34180518 | three_prime_UTR |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| CcUC02G038810.1-cds | CcUC02G038810.1-cds-CicolChr02:34180519..34180680 | CDS |
| CcUC02G038810.1-cds | CcUC02G038810.1-cds-CicolChr02:34181361..34181442 | CDS |
| CcUC02G038810.1-cds | CcUC02G038810.1-cds-CicolChr02:34181753..34181766 | CDS |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
|---|
| CcUC02G038810.1 | CcUC02G038810.1-protein | polypeptide |
|
