CcUC02G038770.1 (mRNA) Watermelon (PI 537277) v1

Overview


Name	CcUC02G038770.1
Type	mRNA
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	lysine-rich arabinogalactan protein 18-like
Location	CicolChr02: 34158576 .. 34159082 (-)
Sequence length	507
RNA-Seq Expression	CcUC02G038770.1
Synteny	CcUC02G038770.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAAATCCATTGCTTTCCCTTCTCTTCTTTTCATCTTCGTTTCGCTAGTGATCAACGACGTTTTCTCTTTGGAACTATCGCAGCAACTTTCTCCTTCTCCATCTCCTGAATCTCCTGAAAATTCTCCTCCATTACCTTCTCCCACTCCATTCCCTCACGCTCCAGCGAGTTCTCCGGTCGAATCGCCTCTGCATTCTCCTCCTGCACCTCCTCCCTCAGATCTCACTCCAACTCCATCTCCAGCGCCTGTTCCTTCTCTGCCACCGACTCCCTCTCCTTCACCAACGGCCGACAGCGATTTCAGTAACAGCACTTCCACAGGCGGTGGAGAAGACTCCGAAGCCTCCAAAGGCGGGATGAATGGAGGAAAGAAGGCTGGAATTGCAGTTGGAGTGATTGCTGCAGTGTGTTTCGTCGGAATAGGAGGATTCGTGTACAAGAAGCGCCAGGATAACATTCGTCGATCTCAGTACGGGAGCGCTGCTAGGTCGTCGTTCTTGTGA

mRNA sequence

ATGGCGAAATCCATTGCTTTCCCTTCTCTTCTTTTCATCTTCGTTTCGCTAGTGATCAACGACGTTTTCTCTTTGGAACTATCGCAGCAACTTTCTCCTTCTCCATCTCCTGAATCTCCTGAAAATTCTCCTCCATTACCTTCTCCCACTCCATTCCCTCACGCTCCAGCGAGTTCTCCGGTCGAATCGCCTCTGCATTCTCCTCCTGCACCTCCTCCCTCAGATCTCACTCCAACTCCATCTCCAGCGCCTGTTCCTTCTCTGCCACCGACTCCCTCTCCTTCACCAACGGCCGACAGCGATTTCAGTAACAGCACTTCCACAGGCGGTGGAGAAGACTCCGAAGCCTCCAAAGGCGGGATGAATGGAGGAAAGAAGGCTGGAATTGCAGTTGGAGTGATTGCTGCAGTGTGTTTCGTCGGAATAGGAGGATTCGTGTACAAGAAGCGCCAGGATAACATTCGTCGATCTCAGTACGGGAGCGCTGCTAGGTCGTCGTTCTTGTGA

Coding sequence (CDS)

ATGGCGAAATCCATTGCTTTCCCTTCTCTTCTTTTCATCTTCGTTTCGCTAGTGATCAACGACGTTTTCTCTTTGGAACTATCGCAGCAACTTTCTCCTTCTCCATCTCCTGAATCTCCTGAAAATTCTCCTCCATTACCTTCTCCCACTCCATTCCCTCACGCTCCAGCGAGTTCTCCGGTCGAATCGCCTCTGCATTCTCCTCCTGCACCTCCTCCCTCAGATCTCACTCCAACTCCATCTCCAGCGCCTGTTCCTTCTCTGCCACCGACTCCCTCTCCTTCACCAACGGCCGACAGCGATTTCAGTAACAGCACTTCCACAGGCGGTGGAGAAGACTCCGAAGCCTCCAAAGGCGGGATGAATGGAGGAAAGAAGGCTGGAATTGCAGTTGGAGTGATTGCTGCAGTGTGTTTCGTCGGAATAGGAGGATTCGTGTACAAGAAGCGCCAGGATAACATTCGTCGATCTCAGTACGGGAGCGCTGCTAGGTCGTCGTTCTTGTGA

Protein sequence

MAKSIAFPSLLFIFVSLVINDVFSLELSQQLSPSPSPESPENSPPLPSPTPFPHAPASSPVESPLHSPPAPPPSDLTPTPSPAPVPSLPPTPSPSPTADSDFSNSTSTGGGEDSEASKGGMNGGKKAGIAVGVIAAVCFVGIGGFVYKKRQDNIRRSQYGSAARSSFL

Homology

[Close]

BLAST of CcUC02G038770.1 vs. NCBI nr
Match: XP_038901486.1 (early nodulin-20-like isoform X1 [Benincasa hispida])

HSP 1 Score: 254.6 bits (649), Expect = 5.9e-64
Identity = 150/168 (89.29%), Postives = 155/168 (92.26%), Query Frame = 0


Query: 1   MAKSIAFPSLLFIFVSLVINDVFSLELSQQLSPSPSPESPENSPPLPSPTPFPHAPASSP 60
           MAKSI F SLLFIFVSL IN  FSLELSQQL PSPSPESPENSPPLPSPTPFPHAPASSP
Sbjct: 1   MAKSIPFCSLLFIFVSLFINVSFSLELSQQLPPSPSPESPENSPPLPSPTPFPHAPASSP 60

Query: 61  VESPLHSPPAPPPSDLTPTPSPAPVPSLPPTPSPSPTADSDFSNSTSTGGGEDSEASKGG 120
           VESPLHSPPAPPPSDLT +PSP+P PS  P+PSPSPTADSDFSNSTS+GGGEDSEASKGG
Sbjct: 61  VESPLHSPPAPPPSDLTHSPSPSPSPS--PSPSPSPTADSDFSNSTSSGGGEDSEASKGG 120

Query: 121 MNGGKKAGIAVGVIAAVCFVGIGGFVYKKRQDNIRRSQYGSAARSSFL 169
           M GGKKAGIAVGVIAA  FVGIGGFVYKKRQDNIRRSQYG+AARSSFL
Sbjct: 121 MTGGKKAGIAVGVIAAASFVGIGGFVYKKRQDNIRRSQYGNAARSSFL 166

[Close]

BLAST of CcUC02G038770.1 vs. NCBI nr
Match: XP_008463942.2 (PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 1 [Cucumis melo] >KAA0035341.1 pollen-specific leucine-rich repeat extensin-like protein 1 [Cucumis melo var. makuwa] >TYK14296.1 pollen-specific leucine-rich repeat extensin-like protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 220.3 bits (560), Expect = 1.2e-53
Identity = 136/168 (80.95%), Postives = 140/168 (83.33%), Query Frame = 0


Query: 1   MAKSIAFPSLLFIFVSLVINDVFSLELSQQLSPSPSPESPENSPPLPSPTPFPHAPASSP 60
           MAK+I    LLFIF+SL IN  FSLELS QL PS    SP NSPPLPSPTPFP+ PASSP
Sbjct: 1   MAKTIHLSCLLFIFLSLFINVSFSLELSHQLPPS---TSPVNSPPLPSPTPFPNVPASSP 60

Query: 61  VESPLHSPPAPPPSDLTPTPSPAPVPSLPPTPSPSPTADSDFSNSTSTGGGEDSEASKGG 120
            ESPLHSPPAPPPSDL PTPSPAPV S  PTPS S  ADSD  N TS GGGEDSE SKGG
Sbjct: 61  AESPLHSPPAPPPSDLPPTPSPAPVLSPAPTPSHSLAADSDSGNITSGGGGEDSEVSKGG 120

Query: 121 MNGGKKAGIAVGVIAAVCFVGIGGFVYKKRQDNIRRSQYGSAARSSFL 169
           MNGGKKAGIAVGVIAA+CFVGIGGFVYKKRQDNIRRSQYGSAARSSFL
Sbjct: 121 MNGGKKAGIAVGVIAALCFVGIGGFVYKKRQDNIRRSQYGSAARSSFL 165

[Close]

BLAST of CcUC02G038770.1 vs. NCBI nr
Match: XP_022995398.1 (lysine-rich arabinogalactan protein 18-like [Cucurbita maxima])

HSP 1 Score: 215.7 bits (548), Expect = 3.1e-52
Identity = 126/168 (75.00%), Postives = 143/168 (85.12%), Query Frame = 0


Query: 1   MAKSIAFPSLLFIFVSLVINDVFSLELSQQLSPSPSPESPENSPPLPSPTPFPHAPASSP 60
           MAKS+AF  LL +FV++ ++  FSLE   ++ PSPSPES  +SPP+PSPTPFPHAPASSP
Sbjct: 1   MAKSVAFCCLLLMFVAVFMDAAFSLEQPVEVPPSPSPESAADSPPVPSPTPFPHAPASSP 60

Query: 61  VESPLHSPPAPPPSDLTPTPSPAPVPSLPPTPSPSPTADSDFSNSTSTGGGEDSEASKGG 120
            ESPL SPPAPPPSDLTP+PSPA VPS  P P+PS TADSDF NS + GGG ++EASKGG
Sbjct: 61  AESPLKSPPAPPPSDLTPSPSPARVPSPSPAPAPSLTADSDFRNSIANGGGGETEASKGG 120

Query: 121 MNGGKKAGIAVGVIAAVCFVGIGGFVYKKRQDNIRRSQYGSAARSSFL 169
           MNGGKKAGIAVGVIAA CFVGIGG VYKKRQDNIRRSQ+G+AARSSFL
Sbjct: 121 MNGGKKAGIAVGVIAAACFVGIGGIVYKKRQDNIRRSQFGNAARSSFL 168

[Close]

BLAST of CcUC02G038770.1 vs. NCBI nr
Match: XP_011656995.1 (proline-rich receptor-like protein kinase PERK9 [Cucumis sativus] >KGN46836.1 hypothetical protein Csa_020743 [Cucumis sativus])

HSP 1 Score: 215.7 bits (548), Expect = 3.1e-52
Identity = 136/170 (80.00%), Postives = 140/170 (82.35%), Query Frame = 0


Query: 1   MAKSIAFPSLLFIFVSLVINDVFSLELSQQLSPSPSPESPENSPPLPSPTPFPHAPASSP 60
           M K+I    LLFIFVSL  N  FSLE  QQL PSP   SP NSPPLPSPTP PHAPASSP
Sbjct: 1   MVKTIHLSCLLFIFVSLFNNVSFSLEQPQQLPPSP---SPVNSPPLPSPTPLPHAPASSP 60

Query: 61  VESPLHSPPAPPPSDLTPTPSPAPVPSLPPTPSP--SPTADSDFSNSTSTGGGEDSEASK 120
           VESPLHSPPAPPPSDL  TPSPAP+  LPP  SP  SP ADSD SN TS GGGEDSE SK
Sbjct: 61  VESPLHSPPAPPPSDLPHTPSPAPL--LPPVSSPSISPAADSDSSNITSGGGGEDSEVSK 120

Query: 121 GGMNGGKKAGIAVGVIAAVCFVGIGGFVYKKRQDNIRRSQYGSAARSSFL 169
           GGMNGGKKAGIAVGVIAA+CFVGIGGFVYKKRQDNIRRSQYG+AARSSFL
Sbjct: 121 GGMNGGKKAGIAVGVIAALCFVGIGGFVYKKRQDNIRRSQYGNAARSSFL 165

[Close]

BLAST of CcUC02G038770.1 vs. NCBI nr
Match: XP_023534499.1 (alpha carbonic anhydrase 8-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 213.8 bits (543), Expect = 1.2e-51
Identity = 124/168 (73.81%), Postives = 142/168 (84.52%), Query Frame = 0


Query: 1   MAKSIAFPSLLFIFVSLVINDVFSLELSQQLSPSPSPESPENSPPLPSPTPFPHAPASSP 60
           MAKS+AF  LL +FV++ ++  FSLE   ++ PSPSPES  +SPP+PSPTPFPHAPASSP
Sbjct: 1   MAKSVAFYCLLLMFVAVFMDAAFSLEQPVEVPPSPSPESAADSPPVPSPTPFPHAPASSP 60

Query: 61  VESPLHSPPAPPPSDLTPTPSPAPVPSLPPTPSPSPTADSDFSNSTSTGGGEDSEASKGG 120
            ESPL SPPAPPPSDLTP+PSPA VPS  P P+PS TADSDF NS + GGG ++E SKGG
Sbjct: 61  AESPLKSPPAPPPSDLTPSPSPARVPSPSPAPAPSLTADSDFRNSIANGGGGETETSKGG 120

Query: 121 MNGGKKAGIAVGVIAAVCFVGIGGFVYKKRQDNIRRSQYGSAARSSFL 169
           MNGGKKAGIAVGVIAA CFVG+GG VYKKRQDNIRRSQ+G+AARSSFL
Sbjct: 121 MNGGKKAGIAVGVIAAACFVGVGGIVYKKRQDNIRRSQFGNAARSSFL 168

[Close]

BLAST of CcUC02G038770.1 vs. ExPASy TrEMBL
Match: A0A5D3CV84 (Pollen-specific leucine-rich repeat extensin-like protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G00190 PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 6.0e-54
Identity = 136/168 (80.95%), Postives = 140/168 (83.33%), Query Frame = 0


Query: 1   MAKSIAFPSLLFIFVSLVINDVFSLELSQQLSPSPSPESPENSPPLPSPTPFPHAPASSP 60
           MAK+I    LLFIF+SL IN  FSLELS QL PS    SP NSPPLPSPTPFP+ PASSP
Sbjct: 1   MAKTIHLSCLLFIFLSLFINVSFSLELSHQLPPS---TSPVNSPPLPSPTPFPNVPASSP 60

Query: 61  VESPLHSPPAPPPSDLTPTPSPAPVPSLPPTPSPSPTADSDFSNSTSTGGGEDSEASKGG 120
            ESPLHSPPAPPPSDL PTPSPAPV S  PTPS S  ADSD  N TS GGGEDSE SKGG
Sbjct: 61  AESPLHSPPAPPPSDLPPTPSPAPVLSPAPTPSHSLAADSDSGNITSGGGGEDSEVSKGG 120

Query: 121 MNGGKKAGIAVGVIAAVCFVGIGGFVYKKRQDNIRRSQYGSAARSSFL 169
           MNGGKKAGIAVGVIAA+CFVGIGGFVYKKRQDNIRRSQYGSAARSSFL
Sbjct: 121 MNGGKKAGIAVGVIAALCFVGIGGFVYKKRQDNIRRSQYGSAARSSFL 165

[Close]

BLAST of CcUC02G038770.1 vs. ExPASy TrEMBL
Match: A0A1S3CKF5 (pollen-specific leucine-rich repeat extensin-like protein 1 OS=Cucumis melo OX=3656 GN=LOC103501947 PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 6.0e-54
Identity = 136/168 (80.95%), Postives = 140/168 (83.33%), Query Frame = 0


Query: 1   MAKSIAFPSLLFIFVSLVINDVFSLELSQQLSPSPSPESPENSPPLPSPTPFPHAPASSP 60
           MAK+I    LLFIF+SL IN  FSLELS QL PS    SP NSPPLPSPTPFP+ PASSP
Sbjct: 1   MAKTIHLSCLLFIFLSLFINVSFSLELSHQLPPS---TSPVNSPPLPSPTPFPNVPASSP 60

Query: 61  VESPLHSPPAPPPSDLTPTPSPAPVPSLPPTPSPSPTADSDFSNSTSTGGGEDSEASKGG 120
            ESPLHSPPAPPPSDL PTPSPAPV S  PTPS S  ADSD  N TS GGGEDSE SKGG
Sbjct: 61  AESPLHSPPAPPPSDLPPTPSPAPVLSPAPTPSHSLAADSDSGNITSGGGGEDSEVSKGG 120

Query: 121 MNGGKKAGIAVGVIAAVCFVGIGGFVYKKRQDNIRRSQYGSAARSSFL 169
           MNGGKKAGIAVGVIAA+CFVGIGGFVYKKRQDNIRRSQYGSAARSSFL
Sbjct: 121 MNGGKKAGIAVGVIAALCFVGIGGFVYKKRQDNIRRSQYGSAARSSFL 165

[Close]

BLAST of CcUC02G038770.1 vs. ExPASy TrEMBL
Match: A0A6J1K7T9 (lysine-rich arabinogalactan protein 18-like OS=Cucurbita maxima OX=3661 GN=LOC111490958 PE=4 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 1.5e-52
Identity = 126/168 (75.00%), Postives = 143/168 (85.12%), Query Frame = 0


Query: 1   MAKSIAFPSLLFIFVSLVINDVFSLELSQQLSPSPSPESPENSPPLPSPTPFPHAPASSP 60
           MAKS+AF  LL +FV++ ++  FSLE   ++ PSPSPES  +SPP+PSPTPFPHAPASSP
Sbjct: 1   MAKSVAFCCLLLMFVAVFMDAAFSLEQPVEVPPSPSPESAADSPPVPSPTPFPHAPASSP 60

Query: 61  VESPLHSPPAPPPSDLTPTPSPAPVPSLPPTPSPSPTADSDFSNSTSTGGGEDSEASKGG 120
            ESPL SPPAPPPSDLTP+PSPA VPS  P P+PS TADSDF NS + GGG ++EASKGG
Sbjct: 61  AESPLKSPPAPPPSDLTPSPSPARVPSPSPAPAPSLTADSDFRNSIANGGGGETEASKGG 120

Query: 121 MNGGKKAGIAVGVIAAVCFVGIGGFVYKKRQDNIRRSQYGSAARSSFL 169
           MNGGKKAGIAVGVIAA CFVGIGG VYKKRQDNIRRSQ+G+AARSSFL
Sbjct: 121 MNGGKKAGIAVGVIAAACFVGIGGIVYKKRQDNIRRSQFGNAARSSFL 168

[Close]

BLAST of CcUC02G038770.1 vs. ExPASy TrEMBL
Match: A0A0A0KGE9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G140840 PE=4 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 1.5e-52
Identity = 136/170 (80.00%), Postives = 140/170 (82.35%), Query Frame = 0


Query: 1   MAKSIAFPSLLFIFVSLVINDVFSLELSQQLSPSPSPESPENSPPLPSPTPFPHAPASSP 60
           M K+I    LLFIFVSL  N  FSLE  QQL PSP   SP NSPPLPSPTP PHAPASSP
Sbjct: 1   MVKTIHLSCLLFIFVSLFNNVSFSLEQPQQLPPSP---SPVNSPPLPSPTPLPHAPASSP 60

Query: 61  VESPLHSPPAPPPSDLTPTPSPAPVPSLPPTPSP--SPTADSDFSNSTSTGGGEDSEASK 120
           VESPLHSPPAPPPSDL  TPSPAP+  LPP  SP  SP ADSD SN TS GGGEDSE SK
Sbjct: 61  VESPLHSPPAPPPSDLPHTPSPAPL--LPPVSSPSISPAADSDSSNITSGGGGEDSEVSK 120

Query: 121 GGMNGGKKAGIAVGVIAAVCFVGIGGFVYKKRQDNIRRSQYGSAARSSFL 169
           GGMNGGKKAGIAVGVIAA+CFVGIGGFVYKKRQDNIRRSQYG+AARSSFL
Sbjct: 121 GGMNGGKKAGIAVGVIAALCFVGIGGFVYKKRQDNIRRSQYGNAARSSFL 165

[Close]

BLAST of CcUC02G038770.1 vs. ExPASy TrEMBL
Match: A0A6J1H149 (lysine-rich arabinogalactan protein 18-like OS=Cucurbita moschata OX=3662 GN=LOC111459430 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 1.1e-50
Identity = 123/168 (73.21%), Postives = 140/168 (83.33%), Query Frame = 0


Query: 1   MAKSIAFPSLLFIFVSLVINDVFSLELSQQLSPSPSPESPENSPPLPSPTPFPHAPASSP 60
           MAKS+AF  LL +FV++ ++  FSLE   ++ PSPSPES  +SPP+PSPTPFPHAPASSP
Sbjct: 1   MAKSVAFCCLLLMFVAVFMDAAFSLEQPVEVPPSPSPESAADSPPVPSPTPFPHAPASSP 60

Query: 61  VESPLHSPPAPPPSDLTPTPSPAPVPSLPPTPSPSPTADSDFSNSTSTGGGEDSEASKGG 120
            ESPL SPPAPP SDLTP PSPA VPS  P P+PS TADSDF NS + GGG ++E SKGG
Sbjct: 61  AESPLKSPPAPPRSDLTPCPSPARVPSPSPAPAPSLTADSDFRNSIANGGGGETETSKGG 120

Query: 121 MNGGKKAGIAVGVIAAVCFVGIGGFVYKKRQDNIRRSQYGSAARSSFL 169
           MNGGKKAGIAVGVIAA CFVG+GG VYKKRQDNIRRSQ+G+AARSSFL
Sbjct: 121 MNGGKKAGIAVGVIAAACFVGVGGIVYKKRQDNIRRSQFGNAARSSFL 168

[Close]

BLAST of CcUC02G038770.1 vs. TAIR 10
Match: AT3G45230.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 83.6 bits (205), Expect = 1.7e-16
Identity = 79/172 (45.93%), Postives = 108/172 (62.79%), Query Frame = 0


Query: 10  LLFIFVSLVINDVF-SLELSQQLSPSPSPESPENSPPLPSPTPFPHAPASSPVESPL-HS 69
           L FI V+++++ V  S E+  + SP+PSP+  + SP + +  P      +SP ESP+ +S
Sbjct: 3   LEFIIVAMMLSLVLVSGEILTKSSPAPSPDLAD-SPLIHASPPSKLGSHNSPAESPIEYS 62

Query: 70  PPAPPPSDLTPTPSPAPVPSLPP-------------TPSPSPTADSDFSNSTSTG--GGE 129
            P  P ++ +P+PSPA  PS+ P             +PSPSP A SD ++S  TG  G +
Sbjct: 63  SPPEPETEHSPSPSPANSPSVSPPLPNDSQSPSSSASPSPSPEA-SDVNHSDITGIEGEK 122

Query: 130 DSEASKGGMNGGKKAGIAVGVIAAVCFVGIGGFVYKKRQDNIRRSQYGSAAR 165
               S GGM+GGKK G+A G IAAVC VG+ GFVYKKRQ+NIRRS+YG AAR
Sbjct: 123 LPSGSGGGMSGGKKVGVAFGAIAAVCVVGVAGFVYKKRQENIRRSRYGYAAR 172

[Close]

BLAST of CcUC02G038770.1 vs. TAIR 10
Match: AT2G28440.1 (proline-rich family protein )

HSP 1 Score: 52.8 bits (125), Expect = 3.2e-07
Identity = 55/143 (38.46%), Postives = 71/143 (49.65%), Query Frame = 0


Query: 29  QQLSPSPSPESPENSPPLPSPTPFPHAPASSPVESPLHSPPAPPPSDLTPTPSPAPVPSL 88
           Q  + SP PES  +SP  P P P P +P+S     P    P P PSD      P P    
Sbjct: 129 QSPASSPKPESLADSPSPPPPPPQPESPSSPSYPEP---APVPAPSDDDSDDDPEPETEY 188

Query: 89  PPTPSPSPTADSDFSNSTSTGGGEDSEASKG---GMNGGKKAGIAVGVIAAVCFVGIGGF 148
            P+P+PSP          S   GE+    +G   GM+G +KAGIA+G I  V  + IG  
Sbjct: 189 FPSPAPSPELGMAQDIKASDAAGEELNDERGEDYGMSGLEKAGIAIGTILGVGAIVIGAL 248

Query: 149 VYKKRQDNIRRSQYGSAARSSFL 169
           VYKKR+DN+ R++Y       FL
Sbjct: 249 VYKKRRDNMTRARYTYFTEGEFL 268

[Close]

BLAST of CcUC02G038770.1 vs. TAIR 10
Match: AT5G60630.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT3G45230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 49.7 bits (117), Expect = 2.7e-06
Identity = 43/104 (41.35%), Postives = 63/104 (60.58%), Query Frame = 0


Query: 66  HSPPAP-PPSDLTPTPSPAPVPSLPPTPSPSPTADSDFSNSTSTGGGEDSEASKGGMNGG 125
           HS   P   ++++P+P+ +     P +   + + D ++++ST  GG E S   + G  GG
Sbjct: 36  HSSSLPQSETEMSPSPTMSNDYDYPSSSQLTESNDLNYTDSTRPGGEEASVGGENGGGGG 95

Query: 126 KKAGIA-VGVIAAVCFVGIGGFVYKKRQDNIRRSQYGSAARSSF 168
           KK GIA VG IAA   VG GG+V KKR++NIRRS+YG A+   F
Sbjct: 96  KKTGIAVVGSIAAASMVGFGGYVLKKRRENIRRSRYGYASTEFF 139

The following BLAST results are available for this feature:

BLAST of CcUC02G038770.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038901486.1	5.9e-64	89.29	early nodulin-20-like isoform X1 [Benincasa hispida]	[more]
XP_008463942.2	1.2e-53	80.95	PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 1 [Cucumis ...	[more]
XP_022995398.1	3.1e-52	75.00	lysine-rich arabinogalactan protein 18-like [Cucurbita maxima]	[more]
XP_011656995.1	3.1e-52	80.00	proline-rich receptor-like protein kinase PERK9 [Cucumis sativus] >KGN46836.1 hy...	[more]
XP_023534499.1	1.2e-51	73.81	alpha carbonic anhydrase 8-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CcUC02G038770.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CcUC02G038770.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CV84	6.0e-54	80.95	Pollen-specific leucine-rich repeat extensin-like protein 1 OS=Cucumis melo var....	[more]
A0A1S3CKF5	6.0e-54	80.95	pollen-specific leucine-rich repeat extensin-like protein 1 OS=Cucumis melo OX=3...	[more]
A0A6J1K7T9	1.5e-52	75.00	lysine-rich arabinogalactan protein 18-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A0A0KGE9	1.5e-52	80.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G140840 PE=4 SV=1	[more]
A0A6J1H149	1.1e-50	73.21	lysine-rich arabinogalactan protein 18-like OS=Cucurbita moschata OX=3662 GN=LOC...	[more]

BLAST of CcUC02G038770.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G45230.1	1.7e-16	45.93	hydroxyproline-rich glycoprotein family protein	[more]
AT2G28440.1	3.2e-07	38.46	proline-rich family protein	[more]
AT5G60630.1	2.7e-06	41.35	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR01217	PRICHEXTENSN	coord: 86..103 score: 32.22 coord: 40..61 score: 40.91 coord: 69..85 score: 50.59 coord: 26..38 score: 30.77
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..126
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 97..113
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..96
None	No IPR available	PANTHER	PTHR36721:SF5	PROTEIN, PUTATIVE-RELATED	coord: 5..168
None	No IPR available	PANTHER	PTHR36721	PROLINE-RICH FAMILY PROTEIN	coord: 5..168

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CcUC02G038770	CcUC02G038770	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC02G038770.1-exon	CcUC02G038770.1-exon-CicolChr02:34158576..34159082	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC02G038770.1-cds	CcUC02G038770.1-cds-CicolChr02:34158576..34159082	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CcUC02G038770.1	CcUC02G038770.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016301	kinase activity