CcUC02G035920.1 (mRNA) Watermelon (PI 537277) v1

Overview


Name	CcUC02G035920.1
Type	mRNA
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	LOB domain-containing protein
Location	CicolChr02: 31753598 .. 31756376 (+)
Sequence length	596
RNA-Seq Expression	CcUC02G035920.1
Synteny	CcUC02G035920.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCTCATCTCTTTTCTTTCACTTCTTGAAAAAGAAAACCTCTAACTCGCATTTTCAAAACCCAATTACACCAGAAAATTGGGGTAGAAATTAAAACTATCTCAATTTGCATTCTTTGAAGAGAAATGAAGGAGATCAGTGGAAGAAAACAAGGCATATCTCTTTCACCATGTGCAGCTTGTAAGCTTCTCCGTCGTCGATGTGCTCAAGATTGTGTTTTCGCCCCGTATTTCCCCGCCGACGAACCTCATAAATTTGCTAGCGTCCATAAGGTCTTCGGAGCTAGTAATGTTAACAAGATGTTGCAGGTTAGTAACTCAAATTATGTTTTCTTATATTACAAATTGTTTTTAATTTAACCAACTGGAGACTCTCAATTTTTCGTCTAATTAACTAATGGAACTATACTTTGGTTGACGGTTAAATTAGTTAGCTCCTTTGTCAAAGACAGTAGAGAGGTAGGTTTTAAAATTGTCTACGATTGTATGAACAATGAACCAACAATCCTACCATCCTATTATCCTATTATTTCTACAAACCACACAAATTTACAAAAGAGCCCACATTAACTTACGGACAAAAGAAGGAGAAAAAAAAAAAAAAAATAAAATAAAAAAAAAAAATAAAAAACGTCCCAACAAAGAAAAAAAAAAAAAAACAAAAATAAAATAAAATAAAAAAAAAACCAACATTAAATTACGGAAAAAAAAAAGAGAAAAAAAAAAAAAAACAAAAATAAAATAAAATAAAAAAAAAACCAACATTAAATTACGGAAAAAAAAAAGAGAAAAAAAAAAAAAAACAAAAATAAAATAAAATAAAAAAAAAACCAACATTAAATTACGGAAAAAAAAAAGAGAAAAAAAAAAAAAAACAAAAATAAAATAAAATAAAAAAAAAACCAACATTAAATTACGGAAAAAAAAAAGAGAAAAAAAAAAAAAAACAAAAATAAAATAAAATAAAAAAAAAACCAACATTAAATTACGGAAAAAAAAAAGAGAAAAAAAAAAAAAAACAAAAATAAAATAAAATAAAAAAAAAACCAACATTAAATTACGGAAAAAAAAAAGAGAAAAAAAAAAAAAAACAAAAATAAAATAAAATAAAAAAAAAACCAACATTAAATTACGGAAAAAAAAAAGAGAAAAAAAAAAAAAAACAAAAATAAAATAAAATAAAAAAAAAACCAACATTAAATTACGGAAAAAAAAAAGAGAAAAAAAAAAAAAAACAAAAATAAAATAAAATAAAAAAAAAACCAACATTAAATTACGGAAAAAAAAAAGAGAAAAAAAAAAAAAAACAAAAATAAAATAAAATAAAAAAAAAACCAACATTAAATTACGGAAAAAAAAAAGAGAAAAAAAAAAAAAAACAAAAATAAAATAAAATAAAAAAAAAACCAACATTAAATTACGGAAAAAAAAAAGAGAAAAAAAAAAAAAAAAAAAAACCCACGAGTTAAATTAGGATTAAACAACTAATATACATAAATTCGACTTCTAATAGGAAACACTGAATAAAGTTGAATAATTAAATAAGAGGGTAATGTAAATGTTAGGTATCTTTTATTTATTTCCGTTATAGTGGTTGATTACAGTTGAGGAGCCCACCCTATAGACAAATTTTTTATTTTATTTTATTTTTTTTTAAAAAAAAGTGTCTCAAATATTTCTACTTTTTGAAAAAGCAAACCCCAAAATTGGTTGGAAGACCAATTCAGGAGATTCCTTAGCGTATGAAGGAGTAAAGGGCATGGTTTAATTTGTACTAAATAATTAATCAAACCATGCTTTAATTAACCAAGCCTTTGGTTAATTAACACTTAACTGAAGCAAAGTATAATTTATGTTTTAATTAATTGTTTAATCCCCTCAACTTTAACCCCATTAGCCTTATAACTTTTCGAGAAATTACAAGATCAACCTGAACCTTTTTTCCCCTAGCTCCGAAAGAAAGGCAAGATTCTAAATGTTTTTATTTATTTCACTATATTATAAATCAATATTATTTTGTCATTCTAACGTCACCATGACATCTAAAATCCTTTCTTCTTATAAAAGCAATGTAAATAGTTGGTATGAGTACGTTTCTTTTAAATATTGTAATAACTAATAAAATATATTTTGTTGCATTTCTGTTTGTAGCTATCTTTGTGCTACTCACTCGATTTCAATCCCAATTTACCATGTGGTAAACTTATTTCACTTTTACATGATTGGTAAAAAAAAAATTCTCAATAGACTCCTAAAGATGGTTTATCTTTAGGTTTACCATTCTTCAATGAAATTTTTTTTCCCTAAATACTCACTTGGATTTTATGGACTATGATATATTTATATTAGATTATAAAGTTCTATCTCAAAACTAATTGACGAGAGAGAATGAAATAACCATATTTCTTATATAGATTGTGACGTTTTTCCTTGGTTAATAGGAGCTACCAGAGCAGCAACGAAGTGATGCAGTTAGTTCGATGGTGTACGAGGCAAACGCGAGGGTGCGAGATCCAGTGTACGGTTGCGTTGGAGCCATATCATCGCTACAACAACAAATCGATCTCTTGCAAACACAACTAGCAATAGCGCAAGCGGAAGTGGTTCACATGAGGATGCGCCAATTCCCGTCATCCTCCTGCAACCCGACTGCGGGCCACTCACCGGAAACCACCTCACCCTCCGGCAAGATGAACATTCCGGCGCCAAACAAGTCCTATTTTTCCATGGACATGGTTGACCACGACAACATGGGGGAGTCCTTGTGGTCGTCGTGCTAG

mRNA sequence

TTTCTCATCTCTTTTCTTTCACTTCTTGAAAAAGAAAACCTCTAACTCGCATTTTCAAAACCCAATTACACCAGAAAATTGGGGTAGAAATTAAAACTATCTCAATTTGCATTCTTTGAAGAGAAATGAAGGAGATCAGTGGAAGAAAACAAGGCATATCTCTTTCACCATGTGCAGCTTGTAAGCTTCTCCGTCGTCGATGTGCTCAAGATTGTGTTTTCGCCCCGTATTTCCCCGCCGACGAACCTCATAAATTTGCTAGCGTCCATAAGGTCTTCGGAGCTAGTAATGTTAACAAGATGTTGCAGGCAAACGCGAGGGTGCGAGATCCAGTGTACGGTTGCGTTGGAGCCATATCATCGCTACAACAACAAATCGATCTCTTGCAAACACAACTAGCAATAGCGCAAGCGGAAGTGGTTCACATGAGGATGCGCCAATTCCCGTCATCCTCCTGCAACCCGACTGCGGGCCACTCACCGGAAACCACCTCACCCTCCGGCAAGATGAACATTCCGGCGCCAAACAAGTCCTATTTTTCCATGGACATGGTTGACCACGACAACATGGGGGAGTCCTTGTGGTCGTCGTGCTAG

Coding sequence (CDS)

ATGAAGGAGATCAGTGGAAGAAAACAAGGCATATCTCTTTCACCATGTGCAGCTTGTAAGCTTCTCCGTCGTCGATGTGCTCAAGATTGTGTTTTCGCCCCGTATTTCCCCGCCGACGAACCTCATAAATTTGCTAGCGTCCATAAGGTCTTCGGAGCTAGTAATGTTAACAAGATGTTGCAGGCAAACGCGAGGGTGCGAGATCCAGTGTACGGTTGCGTTGGAGCCATATCATCGCTACAACAACAAATCGATCTCTTGCAAACACAACTAGCAATAGCGCAAGCGGAAGTGGTTCACATGAGGATGCGCCAATTCCCGTCATCCTCCTGCAACCCGACTGCGGGCCACTCACCGGAAACCACCTCACCCTCCGGCAAGATGAACATTCCGGCGCCAAACAAGTCCTATTTTTCCATGGACATGGTTGACCACGACAACATGGGGGAGTCCTTGTGGTCGTCGTGCTAG

Protein sequence

MKEISGRKQGISLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKMLQANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMRQFPSSSCNPTAGHSPETTSPSGKMNIPAPNKSYFSMDMVDHDNMGESLWSSC

Homology

[Close]

BLAST of CcUC02G035920.1 vs. NCBI nr
Match: XP_038902133.1 (LOB domain-containing protein 4-like [Benincasa hispida])

HSP 1 Score: 297.0 bits (759), Expect = 9.7e-77
Identity = 150/173 (86.71%), Postives = 152/173 (87.86%), Query Frame = 0


Query: 1   MKEISGRKQGISLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML 60
           MKEI+GRKQG SLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML
Sbjct: 1   MKEINGRKQGTSLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML 60

Query: 61  Q-----------------ANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRM 120
           Q                 ANARVRDPVYGCVGAISSLQQQID+LQTQLAIAQAEVVHMRM
Sbjct: 61  QELPEQQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLAIAQAEVVHMRM 120

Query: 121 RQFPSSSCNPTAGHSPETTSPSGKMNIPAPNKSYFSMDMVDHDNMGESLWSSC 157
           RQFPSSSCN T GHSPET SPSGKMNIPAPNKSYFSMDMVDHDNMGESLWSSC
Sbjct: 121 RQFPSSSCNLTIGHSPETASPSGKMNIPAPNKSYFSMDMVDHDNMGESLWSSC 173

[Close]

BLAST of CcUC02G035920.1 vs. NCBI nr
Match: XP_004150042.1 (LOB domain-containing protein 4 [Cucumis sativus] >KGN46813.1 hypothetical protein Csa_020952 [Cucumis sativus])

HSP 1 Score: 293.5 bits (750), Expect = 1.1e-75
Identity = 149/173 (86.13%), Postives = 151/173 (87.28%), Query Frame = 0


Query: 1   MKEISGRKQGISLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML 60
           MKEISGRKQG SLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML
Sbjct: 1   MKEISGRKQGTSLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML 60

Query: 61  Q-----------------ANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRM 120
           Q                 ANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRM
Sbjct: 61  QELPEQQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRM 120

Query: 121 RQFPSSSCNPTAGHSPETTSPSGKMNIPAPNKSYFSMDMVDHDNMGESLWSSC 157
           R FPSSS NPTAGHSPET SPS KMNIPAPNKSYFSMDMVDHD+MGE+LWSSC
Sbjct: 121 RHFPSSSYNPTAGHSPETASPSSKMNIPAPNKSYFSMDMVDHDSMGETLWSSC 173

[Close]

BLAST of CcUC02G035920.1 vs. NCBI nr
Match: KAA0054642.1 (LOB domain-containing protein 4-like [Cucumis melo var. makuwa] >TYK08620.1 LOB domain-containing protein 4-like [Cucumis melo var. makuwa])

HSP 1 Score: 284.6 bits (727), Expect = 5.0e-73
Identity = 145/173 (83.82%), Postives = 147/173 (84.97%), Query Frame = 0


Query: 1   MKEISGRKQGISLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML 60
           MKEISGRKQG SLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML
Sbjct: 1   MKEISGRKQGTSLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML 60

Query: 61  Q-----------------ANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRM 120
           Q                 ANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRM
Sbjct: 61  QELPEQQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRM 120

Query: 121 RQFPSSSCNPTAGHSPETTSPSGKMNIPAPNKSYFSMDMVDHDNMGESLWSSC 157
           R  PSSS NPT GHS ET SPS KMNIP PNKSYFSMDMVDHD+MGE+LWSSC
Sbjct: 121 RHIPSSSYNPTMGHSSETASPSSKMNIPVPNKSYFSMDMVDHDSMGETLWSSC 173

[Close]

BLAST of CcUC02G035920.1 vs. NCBI nr
Match: XP_023533072.1 (LOB domain-containing protein 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 258.8 bits (660), Expect = 2.9e-65
Identity = 139/173 (80.35%), Postives = 144/173 (83.24%), Query Frame = 0


Query: 1   MKEISGRKQGISLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML 60
           MKE SGRKQG +++PCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML
Sbjct: 1   MKE-SGRKQG-AVAPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML 60

Query: 61  Q-----------------ANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRM 120
           Q                 ANARVRDPVYGCVGAISSLQQQIDLLQT+LAIAQAEVVHMRM
Sbjct: 61  QELPEHQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTELAIAQAEVVHMRM 120

Query: 121 RQFPSSSCNPTAGHSPETTSPSGKMNIPAPNKSYFSMDMVDHDNMGESLWSSC 157
           RQF SSS NPTAGHSPET SPSGK+NIP  NKSYFSM     DNMGESLWSSC
Sbjct: 121 RQFTSSSSNPTAGHSPETVSPSGKINIPPQNKSYFSM-----DNMGESLWSSC 166

[Close]

BLAST of CcUC02G035920.1 vs. NCBI nr
Match: XP_022149611.1 (LOB domain-containing protein 4 [Momordica charantia])

HSP 1 Score: 258.8 bits (660), Expect = 2.9e-65
Identity = 137/173 (79.19%), Postives = 145/173 (83.82%), Query Frame = 0


Query: 1   MKEISGRKQGISLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML 60
           MKE SGRKQG +LSPCAACKLLRRRCA DCVFAPYFPADEPHKFASVHKVFGASNVNKML
Sbjct: 1   MKESSGRKQG-TLSPCAACKLLRRRCAHDCVFAPYFPADEPHKFASVHKVFGASNVNKML 60

Query: 61  Q-----------------ANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRM 120
           Q                 ANAR+RDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRM
Sbjct: 61  QELPEHQRSDAVSSMVYEANARMRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRM 120

Query: 121 RQFPSSSCNPTAGHSPETTSPSGKMNIPAPNKSYFSMDMVDHDNMGESLWSSC 157
           RQFPS+S  P+A HSPET   +GK+NIPA NKS+F+MDMV HDNMGESLWSSC
Sbjct: 121 RQFPSTS-TPSAAHSPET---AGKLNIPAQNKSFFTMDMVGHDNMGESLWSSC 168

[Close]

BLAST of CcUC02G035920.1 vs. ExPASy Swiss-Prot
Match: Q9SHE9 (LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 4.0e-49
Identity = 113/175 (64.57%), Postives = 127/175 (72.57%), Query Frame = 0


Query: 1   MKEISGRKQGISLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML 60
           MKE S RKQG + SPCAACKLLRRRCAQDCVF+PYFPADEP KFA+VH+VFGASNVNKML
Sbjct: 1   MKE-SSRKQG-AASPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKML 60

Query: 61  Q-----------------ANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRM 120
           Q                 ANARVRDPVYGCVGAISSLQQQID+LQ QLA+AQAEVVH+R+
Sbjct: 61  QELPIHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRV 120

Query: 121 RQ---FPSSSCNPTAGHSPETTSPSGKMNIPAPNKSYFS-MDMVDHDNMGESLWS 155
           RQ   FP     P +  S  + SPS K   P  NK  FS MD+VD  ++GES+WS
Sbjct: 121 RQSTNFPGHGLCPDSPSS--SGSPSSKQVSPQDNKGMFSHMDIVDEASLGESMWS 171

[Close]

BLAST of CcUC02G035920.1 vs. ExPASy Swiss-Prot
Match: Q8LBW3 (LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 SV=2)

HSP 1 Score: 145.6 bits (366), Expect = 4.7e-34
Identity = 73/116 (62.93%), Postives = 86/116 (74.14%), Query Frame = 0


Query: 10  GISLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKMLQ-------- 69
           G   SPCA+CKLLRRRCA+DC+FAPYFP D+PHKFA VHKVFGASNV+KMLQ        
Sbjct: 3   GPGSSPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRA 62

Query: 70  ---------ANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMRQFPS 109
                    ANARVRDPVYGCVGAIS LQ Q+  LQ QLA+AQAE++ ++M+  P+
Sbjct: 63  DAVNSLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQNEPT 118

[Close]

BLAST of CcUC02G035920.1 vs. ExPASy Swiss-Prot
Match: Q9SA51 (LOB domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=LBD3 PE=2 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 1.1e-33
Identity = 84/170 (49.41%), Postives = 105/170 (61.76%), Query Frame = 0


Query: 6   GRKQGISLSPCAACKLLRRRCAQD-CVFAPYFPADEPHKFASVHKVFGASNVNKMLQ--- 65
           G + G ++SPCA CKLLRR+C +D CVFAPYFPA EP+KFA VHK+FGASNVNKMLQ   
Sbjct: 5   GHRHGRTVSPCAGCKLLRRKCVKDSCVFAPYFPAKEPYKFAIVHKIFGASNVNKMLQELS 64

Query: 66  --------------ANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMRQFP 125
                         ANAR++DPVYGCVG ISSL +Q++ LQTQLA AQAE++H  +R   
Sbjct: 65  ENHRSDAVDSMVYEANARIQDPVYGCVGTISSLHRQLETLQTQLAFAQAELIH--IRTLH 124

Query: 126 SSSCNPTAGHSPETTSPSGKMNIPAPNKSYFS---MDMVDHDNMGESLWS 155
                P    +   T PS        NK ++S   M +   D+ G+ LWS
Sbjct: 125 RIHTKPPPYTASTVTFPS--------NKDFYSDIDMAVAYTDDAGDFLWS 164

[Close]

BLAST of CcUC02G035920.1 vs. ExPASy Swiss-Prot
Match: Q8L5T5 (LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 SV=2)

HSP 1 Score: 129.8 bits (325), Expect = 2.7e-29
Identity = 62/111 (55.86%), Postives = 80/111 (72.07%), Query Frame = 0


Query: 12  SLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML----------- 71
           +++PCAACKLLRRRCAQ+C F+PYF   EPHKFASVHKVFGASNV+KML           
Sbjct: 42  TITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPESQRADA 101

Query: 72  ------QANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMRQ 106
                 +AN R+RDPVYGC+GAIS+LQQQ+  LQ +L   ++E++  + R+
Sbjct: 102 ANSLVYEANVRLRDPVYGCMGAISALQQQVQALQAELTAVRSEILKYKQRE 152

[Close]

BLAST of CcUC02G035920.1 vs. ExPASy Swiss-Prot
Match: Q9FML4 (Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana OX=3702 GN=LOB PE=1 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 1.9e-27
Identity = 60/104 (57.69%), Postives = 72/104 (69.23%), Query Frame = 0


Query: 14  SPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML------------- 73
           SPCAACK LRR+C   C+FAPYFP +EPHKFA+VHK+FGASNV K+L             
Sbjct: 10  SPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPHQREDAVN 69

Query: 74  ----QANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVH 101
               +A ARVRDPVYGCVGAIS LQ+Q+  LQ +L  A A++ H
Sbjct: 70  SLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAH 113

[Close]

BLAST of CcUC02G035920.1 vs. ExPASy TrEMBL
Match: A0A0A0KBA8 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G139130 PE=3 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 5.2e-76
Identity = 149/173 (86.13%), Postives = 151/173 (87.28%), Query Frame = 0


Query: 1   MKEISGRKQGISLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML 60
           MKEISGRKQG SLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML
Sbjct: 1   MKEISGRKQGTSLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML 60

Query: 61  Q-----------------ANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRM 120
           Q                 ANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRM
Sbjct: 61  QELPEQQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRM 120

Query: 121 RQFPSSSCNPTAGHSPETTSPSGKMNIPAPNKSYFSMDMVDHDNMGESLWSSC 157
           R FPSSS NPTAGHSPET SPS KMNIPAPNKSYFSMDMVDHD+MGE+LWSSC
Sbjct: 121 RHFPSSSYNPTAGHSPETASPSSKMNIPAPNKSYFSMDMVDHDSMGETLWSSC 173

[Close]

BLAST of CcUC02G035920.1 vs. ExPASy TrEMBL
Match: A0A5D3CBA3 (LOB domain-containing protein 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3734G00510 PE=3 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 2.4e-73
Identity = 145/173 (83.82%), Postives = 147/173 (84.97%), Query Frame = 0


Query: 1   MKEISGRKQGISLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML 60
           MKEISGRKQG SLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML
Sbjct: 1   MKEISGRKQGTSLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML 60

Query: 61  Q-----------------ANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRM 120
           Q                 ANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRM
Sbjct: 61  QELPEQQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRM 120

Query: 121 RQFPSSSCNPTAGHSPETTSPSGKMNIPAPNKSYFSMDMVDHDNMGESLWSSC 157
           R  PSSS NPT GHS ET SPS KMNIP PNKSYFSMDMVDHD+MGE+LWSSC
Sbjct: 121 RHIPSSSYNPTMGHSSETASPSSKMNIPVPNKSYFSMDMVDHDSMGETLWSSC 173

[Close]

BLAST of CcUC02G035920.1 vs. ExPASy TrEMBL
Match: A0A6J1I1K8 (LOB domain-containing protein 4-like OS=Cucurbita maxima OX=3661 GN=LOC111469678 PE=3 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 1.4e-65
Identity = 139/173 (80.35%), Postives = 144/173 (83.24%), Query Frame = 0


Query: 1   MKEISGRKQGISLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML 60
           MKE SGRKQG +++PCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML
Sbjct: 1   MKE-SGRKQG-AVAPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML 60

Query: 61  Q-----------------ANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRM 120
           Q                 ANARVRDPVYGCVGAISSLQQQIDLLQT+LAIAQAEVVHMRM
Sbjct: 61  QELPEHQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTELAIAQAEVVHMRM 120

Query: 121 RQFPSSSCNPTAGHSPETTSPSGKMNIPAPNKSYFSMDMVDHDNMGESLWSSC 157
           RQF SSS NPTAGHSPET SPSGK+NIP  NKSYFSM     DNMGESLWSSC
Sbjct: 121 RQFTSSSSNPTAGHSPETASPSGKINIPPQNKSYFSM-----DNMGESLWSSC 166

[Close]

BLAST of CcUC02G035920.1 vs. ExPASy TrEMBL
Match: A0A6J1D8X3 (LOB domain-containing protein 4 OS=Momordica charantia OX=3673 GN=LOC111017996 PE=3 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 1.4e-65
Identity = 137/173 (79.19%), Postives = 145/173 (83.82%), Query Frame = 0


Query: 1   MKEISGRKQGISLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML 60
           MKE SGRKQG +LSPCAACKLLRRRCA DCVFAPYFPADEPHKFASVHKVFGASNVNKML
Sbjct: 1   MKESSGRKQG-TLSPCAACKLLRRRCAHDCVFAPYFPADEPHKFASVHKVFGASNVNKML 60

Query: 61  Q-----------------ANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRM 120
           Q                 ANAR+RDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRM
Sbjct: 61  QELPEHQRSDAVSSMVYEANARMRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRM 120

Query: 121 RQFPSSSCNPTAGHSPETTSPSGKMNIPAPNKSYFSMDMVDHDNMGESLWSSC 157
           RQFPS+S  P+A HSPET   +GK+NIPA NKS+F+MDMV HDNMGESLWSSC
Sbjct: 121 RQFPSTS-TPSAAHSPET---AGKLNIPAQNKSFFTMDMVGHDNMGESLWSSC 168

[Close]

BLAST of CcUC02G035920.1 vs. ExPASy TrEMBL
Match: A0A6J1G6E3 (LOB domain-containing protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111451283 PE=3 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 1.4e-65
Identity = 139/173 (80.35%), Postives = 144/173 (83.24%), Query Frame = 0


Query: 1   MKEISGRKQGISLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML 60
           MKE SGRKQG +++PCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML
Sbjct: 1   MKE-SGRKQG-AVAPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML 60

Query: 61  Q-----------------ANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRM 120
           Q                 ANARVRDPVYGCVGAISSLQQQIDLLQT+LAIAQAEVVHMRM
Sbjct: 61  QELPEHQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTELAIAQAEVVHMRM 120

Query: 121 RQFPSSSCNPTAGHSPETTSPSGKMNIPAPNKSYFSMDMVDHDNMGESLWSSC 157
           RQF SSS NPTAGHSPET SPSGK+NIP  NKSYFSM     DNMGESLWSSC
Sbjct: 121 RQFTSSSSNPTAGHSPETASPSGKINIPPQNKSYFSM-----DNMGESLWSSC 166

[Close]

BLAST of CcUC02G035920.1 vs. TAIR 10
Match: AT1G31320.1 (LOB domain-containing protein 4 )

HSP 1 Score: 195.7 bits (496), Expect = 2.8e-50
Identity = 113/175 (64.57%), Postives = 127/175 (72.57%), Query Frame = 0


Query: 1   MKEISGRKQGISLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML 60
           MKE S RKQG + SPCAACKLLRRRCAQDCVF+PYFPADEP KFA+VH+VFGASNVNKML
Sbjct: 1   MKE-SSRKQG-AASPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKML 60

Query: 61  Q-----------------ANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRM 120
           Q                 ANARVRDPVYGCVGAISSLQQQID+LQ QLA+AQAEVVH+R+
Sbjct: 61  QELPIHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRV 120

Query: 121 RQ---FPSSSCNPTAGHSPETTSPSGKMNIPAPNKSYFS-MDMVDHDNMGESLWS 155
           RQ   FP     P +  S  + SPS K   P  NK  FS MD+VD  ++GES+WS
Sbjct: 121 RQSTNFPGHGLCPDSPSS--SGSPSSKQVSPQDNKGMFSHMDIVDEASLGESMWS 171

[Close]

BLAST of CcUC02G035920.1 vs. TAIR 10
Match: AT2G30130.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 145.6 bits (366), Expect = 3.4e-35
Identity = 73/116 (62.93%), Postives = 86/116 (74.14%), Query Frame = 0


Query: 10  GISLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKMLQ-------- 69
           G   SPCA+CKLLRRRCA+DC+FAPYFP D+PHKFA VHKVFGASNV+KMLQ        
Sbjct: 3   GPGSSPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRA 62

Query: 70  ---------ANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMRQFPS 109
                    ANARVRDPVYGCVGAIS LQ Q+  LQ QLA+AQAE++ ++M+  P+
Sbjct: 63  DAVNSLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQNEPT 118

[Close]

BLAST of CcUC02G035920.1 vs. TAIR 10
Match: AT1G16530.1 (ASYMMETRIC LEAVES 2-like 9 )

HSP 1 Score: 144.4 bits (363), Expect = 7.5e-35
Identity = 84/170 (49.41%), Postives = 105/170 (61.76%), Query Frame = 0


Query: 6   GRKQGISLSPCAACKLLRRRCAQD-CVFAPYFPADEPHKFASVHKVFGASNVNKMLQ--- 65
           G + G ++SPCA CKLLRR+C +D CVFAPYFPA EP+KFA VHK+FGASNVNKMLQ   
Sbjct: 5   GHRHGRTVSPCAGCKLLRRKCVKDSCVFAPYFPAKEPYKFAIVHKIFGASNVNKMLQELS 64

Query: 66  --------------ANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMRQFP 125
                         ANAR++DPVYGCVG ISSL +Q++ LQTQLA AQAE++H  +R   
Sbjct: 65  ENHRSDAVDSMVYEANARIQDPVYGCVGTISSLHRQLETLQTQLAFAQAELIH--IRTLH 124

Query: 126 SSSCNPTAGHSPETTSPSGKMNIPAPNKSYFS---MDMVDHDNMGESLWS 155
                P    +   T PS        NK ++S   M +   D+ G+ LWS
Sbjct: 125 RIHTKPPPYTASTVTFPS--------NKDFYSDIDMAVAYTDDAGDFLWS 164

[Close]

BLAST of CcUC02G035920.1 vs. TAIR 10
Match: AT2G40470.1 (LOB domain-containing protein 15 )

HSP 1 Score: 129.8 bits (325), Expect = 1.9e-30
Identity = 62/111 (55.86%), Postives = 80/111 (72.07%), Query Frame = 0


Query: 12  SLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML----------- 71
           +++PCAACKLLRRRCAQ+C F+PYF   EPHKFASVHKVFGASNV+KML           
Sbjct: 42  TITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPESQRADA 101

Query: 72  ------QANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMRQ 106
                 +AN R+RDPVYGC+GAIS+LQQQ+  LQ +L   ++E++  + R+
Sbjct: 102 ANSLVYEANVRLRDPVYGCMGAISALQQQVQALQAELTAVRSEILKYKQRE 152

[Close]

BLAST of CcUC02G035920.1 vs. TAIR 10
Match: AT5G63090.2 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 123.6 bits (309), Expect = 1.4e-28
Identity = 60/104 (57.69%), Postives = 72/104 (69.23%), Query Frame = 0


Query: 14  SPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML------------- 73
           SPCAACK LRR+C   C+FAPYFP +EPHKFA+VHK+FGASNV K+L             
Sbjct: 10  SPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPHQREDAVN 69

Query: 74  ----QANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVH 101
               +A ARVRDPVYGCVGAIS LQ+Q+  LQ +L  A A++ H
Sbjct: 70  SLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAH 113

The following BLAST results are available for this feature:

BLAST of CcUC02G035920.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038902133.1	9.7e-77	86.71	LOB domain-containing protein 4-like [Benincasa hispida]	[more]
XP_004150042.1	1.1e-75	86.13	LOB domain-containing protein 4 [Cucumis sativus] >KGN46813.1 hypothetical prote...	[more]
KAA0054642.1	5.0e-73	83.82	LOB domain-containing protein 4-like [Cucumis melo var. makuwa] >TYK08620.1 LOB ...	[more]
XP_023533072.1	2.9e-65	80.35	LOB domain-containing protein 4-like [Cucurbita pepo subsp. pepo]	[more]
XP_022149611.1	2.9e-65	79.19	LOB domain-containing protein 4 [Momordica charantia]	[more]

BLAST of CcUC02G035920.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SHE9	4.0e-49	64.57	LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=...	[more]
Q8LBW3	4.7e-34	62.93	LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 S...	[more]
Q9SA51	1.1e-33	49.41	LOB domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=LBD3 PE=2 SV=...	[more]
Q8L5T5	2.7e-29	55.86	LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 S...	[more]
Q9FML4	1.9e-27	57.69	Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana OX=3702 GN=LOB PE=1 SV=...	[more]

BLAST of CcUC02G035920.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KBA8	5.2e-76	86.13	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G139130 PE=3 SV...	[more]
A0A5D3CBA3	2.4e-73	83.82	LOB domain-containing protein 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A6J1I1K8	1.4e-65	80.35	LOB domain-containing protein 4-like OS=Cucurbita maxima OX=3661 GN=LOC111469678...	[more]
A0A6J1D8X3	1.4e-65	79.19	LOB domain-containing protein 4 OS=Momordica charantia OX=3673 GN=LOC111017996 P...	[more]
A0A6J1G6E3	1.4e-65	80.35	LOB domain-containing protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC1114512...	[more]

BLAST of CcUC02G035920.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G31320.1	2.8e-50	64.57	LOB domain-containing protein 4	[more]
AT2G30130.1	3.4e-35	62.93	Lateral organ boundaries (LOB) domain family protein	[more]
AT1G16530.1	7.5e-35	49.41	ASYMMETRIC LEAVES 2-like 9	[more]
AT2G40470.1	1.9e-30	55.86	LOB domain-containing protein 15	[more]
AT5G63090.2	1.4e-28	57.69	Lateral organ boundaries (LOB) domain family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 77..97
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 107..130
None	No IPR available	PANTHER	PTHR31301:SF58	LOB DOMAIN-CONTAINING PROTEIN 3	coord: 3..61
None	No IPR available	PANTHER	PTHR31301	LOB DOMAIN-CONTAINING PROTEIN 4-RELATED	coord: 62..152
None	No IPR available	PANTHER	PTHR31301	LOB DOMAIN-CONTAINING PROTEIN 4-RELATED	coord: 3..61
None	No IPR available	PANTHER	PTHR31301:SF58	LOB DOMAIN-CONTAINING PROTEIN 3	coord: 62..152
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 60..95 e-value: 3.8E-8 score: 33.8 coord: 15..61 e-value: 3.1E-20 score: 72.6
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 14..115 score: 15.368456

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CcUC02G035920	CcUC02G035920	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC02G035920.1-exon	CcUC02G035920.1-exon-CicolChr02:31753598..31753905	exon
CcUC02G035920.1-exon	CcUC02G035920.1-exon-CicolChr02:31756089..31756376	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC02G035920.1-five_prime_utr	CcUC02G035920.1-five_prime_utr-CicolChr02:31753598..31753722	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC02G035920.1-cds	CcUC02G035920.1-cds-CicolChr02:31753723..31753905	CDS
CcUC02G035920.1-cds	CcUC02G035920.1-cds-CicolChr02:31756089..31756376	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CcUC02G035920.1	CcUC02G035920.1-protein	polypeptide