CcUC02G034490.1 (mRNA) Watermelon (PI 537277) v1

Overview


Name	CcUC02G034490.1
Type	mRNA
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	RING-type domain-containing protein
Location	CicolChr02: 30315785 .. 30319889 (-)
Sequence length	1787
RNA-Seq Expression	CcUC02G034490.1
Synteny	CcUC02G034490.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAAGCTTCTTCCCTCCTTCCTTTTCCCCGTTTCTCTCACTACATTTCCCCATTTCTTTTAAGAGAGAGAAAAAGAGAGAATGATTGAAGAGATCGTCTCGTTATTGTAAGTTTTACTCTCACCGCCTTTCAATGGCGAGGACCCACTTCTGTCTGTTACCTTCATCACTCCCCAGCTTCGTTGGCCTTCATACTTTATCCTTATTTTAATTCCTTCCACTCCCATTTTACTTCAGTTTTCAAGCTTCTTCTTCGTGTTCCTCGTTTCTCTGCTTTTAGGGGTTTTTCTTTTGTTTATTCCTTGTAAATCAGTGATTTCGTTGGTTTTCAATTGTAATCCTTAGTGGGTTTTGGTTAATTTTGATGAAACTGAGAAACTCGGTTGATTTTGAGTTGAAATTGGTGTGGATTTGAGAATTTCGTAGCTGGGTTTCTTCGTTTTCTTCTCGTTTTTCTGTAATGGGTGTTCGTATTTCTGATGCATTTATTGGAACTGATAAGTTCCATTGTTTCTGAATTGAAATCCTCTTGGGTTTAATCCAGCTAGTTTTCACCATTTCTGAAAATTTGAAACTCGGTTGATTTTGAGTTGAAATTAGTGTGGATTTGAGAATTTTTTCTCGTTTTTCTGGTATTTCTGATTCGTTTGCTAAAACTGAAAAACTCCATTGATTCTGAGTTGAAATCGGTTTTTTTCTGTGTAATTTAACAGTTTTTGAGTTGAAATCCTCTTGGGTTTAATCCAACTAGTTTTCACCGTTTCACTCTCGACTGCCTCTGTTCTTCATCCTCCTCTCTGTTTCTATTCGGATTACTCTGCAGATTTTTCAGTTTTAATCTTCGTGGTTTGATTCTCAGTTCCGTTTCCACCATTTTTTTCCAAATGAGTTTCTGATAAATTTGCTAATATTTCTGATTTTAATCTAAACAATTTCGTTGAACGATGGCCGGAATGTTGCCTGGAGTTGAATGCGCTAGACGGCGGCGGTTCCACCAGAGTATAACCTCATCGGACTCGCCGTCCACGGCGGCGAAATCAGGATCTACAAGAAGACCATCCTTCTGTTTGTACACAAGCAACCGTGATTTTCATCTCATTTCATCATCTTCTTCACAGGTATATTATATTATGAAATAAATACTAAAAAATTCCATCTATGTTCTTCGAATTATTTCCTGGGAAAATCTGATGAATCGTTTTGTAATTATAAATTAAGCAACGGAGTTCGTCGAATCAAGCTTACGAGAACGAGAAACTTGGTGAAATTGCAAGAGAAGCTAAGGAACGGTTAGATGAAAGGTTGAGGACTCACAGAAAACCTGAAAATCCAAGGTGATTTCTTCATGAGCCACCTTATTTTCTTGACAATTTTATTCATTGTTCTTCAAATCTATTTTCAATCTTTTTCAAACTTTTCTTAAAAAAAAAAAAAGAAAAAAAAAACCGTTTGTTAATAAAATTCACGAATCAGGAAATTTTAATAGATTATAGGTGCAATTGAAAAGTTTAAAATATTGAGGATCAAATTGAAAGTTGACTAAAAGATTACGGACTTGAAAATATGATTTTGGTTCTCGTCGTCGTGAAATATGTTGGATTTTAGTCTTCATATTTTTAGAAATATCAAACCTTAGAAATGTCAAATGTAGGTTTTGTTTGAAATATTTTTCAAATATTTAACTTAAAAAATAGGCTATTTTAAAAAAAAATAATTGTTTTGCAACCATTCAAAATTGATTTTAAAAGTTAATTAGTATTTTTATTTTACACACTTTTATTTTAAATTTAAAAGTTAATTAGTATTTTTATTTTACACACTTTTCTAAAAAAGTATTTAAATGAAAATAAATTTTTAAAAAATATTAATTTTTTAAGTTAATTTAGATCAACAGTTAGTTTTTTAAATTTTGAAATCAATTTGAATGAAATTGGTTAAATACTTATAATTATTTTCATTAAATAAAATACATTTTACAAATTTGTAGACGAAAAACTCATAGAGAGAAGCCAAATTTGTAGATGAAAAACTCATAGATAAAATTCTTCTCTCTTACAAAAGCCAATAAATTAGAAGTTGAACTAAGTTTAAGATTGACTAAAACCATGTTTGCTAAAATTGAATATTTACAAATAGATGAATTAAAAATTGAATAAATCTTAAAACATAGGACAAAAATGATATTTTAGTTATAAATAATAACATTATTGTTATTATTAGGACAATTATTTAAAATTATAAAATTACTAGAAATATTTTTAAATATAGTAAAATGTCATTATCTGTCCATTGTTTATCACTTGATGATAAACCCTGGTATTTTATTATATTTATAAATAAGTTGATTGATTTTAATATAATTGAAAATAATCCGTATTATTATTTTGCCATCTTTTGATTCTTTATTTTGTACAAAAGAAAATTGTTTTGGGTTTTGTTATTAGAAGAATTTACATATCATCAATTGAAGAAAAATATGAAGTAATTGATTACTTGATAATCTACTCTTAATCACATTATAACAAAATTGAAAGAAAAAGATTGTGACACGATAAATTGTCGTTAAGTAATTAGTAAGTTGCACTAAAATAGTTAAAATGAGCTTAGTTTGGCGGTAATTAACATAACTTTTCAGTTTGAATCTCCTAACTCCTAATTATTGTATTAAAAAAGATATACTAAAATAACTAAAATTGAGGGTACACTTCATTATTTCTGTTTTAATTAAATCACCAGCCCTACCTCTACTGGGAAAGGGTTAAATATGTTTTGTACTTCTATTGTATTTTAGTACTAAAATTTCTAAATTTTTCATTTTAGTCCTTTCAGCTTCAGCATTGAATGAATGCTTTGTTTTAAATTTTCATTTCTATACTTTTTTTACTTTATGGTGGAAAGAACCATTTAATCATTGCATTCGTTTCCATTAATTGTCGACCAATTTTATTTAAAAAAAAATCATCGAACCTAATTCTAAATATATAACAAAACCAAAAACAAAATGAAACTACTTTTTATGATTAAAAAAAATTACAACAATAATAATTTTTAAAACTAGAAGTTTAGGCGCTGACATTGATCAAAGTTGAAAATACAGAAACAAAAGTATGATTCAATTTTAAGCCCAGTTTGACAATTATACTTTTTTTTTTTTCATTAAGTTTATTTTCTTACAATTATTTTATCATAATTTTTCATCTTTTCTAATTAAAAACACTTGAATTCTTATTTAAATTTAAAATACCAAGCAACATTTTGAAAAACTCTACTAAAAAAATAGTTAGCAAAACAAAGAAAATCAATATGTGAAAATAATCTCTATAAACTTAATTTTTAAAAAATCATGATAATGAAAGGAGATGATTCGTGAGATTATTCTCCTAAATGATAAGAGACATTTAAATTCAAACTCTTGAAGCTATAAAAACAAAGTCTAAACTACGTCCAAGCTCCATAAACCAATTAAATTTGTAATTTAGCCTAAAATCAACCTAAAACATCAAAATCATTATCAATTTCAAGAAATTCTTCTTTTTGGGTAAAATTATACAGGAGGAAGAGTGGGAATGAAGAAGTAGGGTGGAAGGAATCATCAGAAAAACATGGTAAAAAAAAAGAAAAAGCAAAGGGAAAAGAAGAAACAACAAGAAAGAAAAGATTGAGTTGGGGGAAGCTAATGAAATGGAAAGCCTTAGAGCAAGAAGAGTGCAGCATTTGTCTAGAACGGTTCAGAGTGGGCGAGCCGCTGGTCCATCTTCCATGCGCCCATAAGTTCCATTCCACCTGCTTGGTCCCTTGGCTCCAAGCCAATGCCCATTGCCCTTGCTGCAGGTTCCCTATTCCCTCTCGTTGACAAACCTAACTCTTCTTCTTTGTATCAAATCAAAGCCCCTTTTCTCCCATTTTAAGCCAACATAGCTGAAATGATATATATATATATATATATATATATATATATTAGCGATTGAGGGGTCGGTAGTTCAAATCTTCCTACTTTTATTGTACTAAGAAAATGTATTAGCTAGATAGGTTTAAAGGTTTAAAGGGGACGAGATAACCACGGTCTTACCATCAAATTATATGATATTAGGTAACCTTGTTTTGCT

mRNA sequence

GGAAGCTTCTTCCCTCCTTCCTTTTCCCCGTTTCTCTCACTACATTTCCCCATTTCTTTTAAGAGAGAGAAAAAGAGAGAATGATTGAAGAGATCGTCTCGTTATTGTAAGTTTTACTCTCACCGCCTTTCAATGGCGAGGACCCACTTCTGTCTGTTACCTTCATCACTCCCCAGCTTCGTTGGCCTTCATACTTTATCCTTATTTTAATTCCTTCCACTCCCATTTTACTTCAGTTTTCAAGCTTCTTCTTCGTGTTCCTCGTTTCTCTGCTTTTAGGGGTTTTTCTTTTGTTTATTCCTTGTAAATCAGTGATTTCGTTGGTTTTCAATTGTAATCCTTAGTGGGTTTTGGTTAATTTTGATGAAACTGAGAAACTCGGTTGATTTTGAGTTGAAATTGGTGTGGATTTGAGAATTTCGTAGCTGGGTTTCTTCGTTTTCTTCTCGTTTTTCTGTAATGGGTGTTCGTATTTCTGATGCATTTATTGGAACTGATAAGTTCCATTGTTTCTGAATTGAAATCCTCTTGGGTTTAATCCAGCTAGTTTTCACCATTTCTGAAAATTTGAAACTCGGTTGATTTTGAGTTGAAATTAGTGTGGATTTGAGAATTTTTTCTCGTTTTTCTGGTATTTCTGATTCGTTTGCTAAAACTGAAAAACTCCATTGATTCTGAGTTGAAATCGGTTTTTTTCTGTGTAATTTAACAGTTTTTGAGTTGAAATCCTCTTGGGTTTAATCCAACTAGTTTTCACCGTTTCACTCTCGACTGCCTCTGTTCTTCATCCTCCTCTCTGTTTCTATTCGGATTACTCTGCAGATTTTTCAGTTTTAATCTTCGTGGTTTGATTCTCAGTTCCGTTTCCACCATTTTTTTCCAAATGAGTTTCTGATAAATTTGCTAATATTTCTGATTTTAATCTAAACAATTTCGTTGAACGATGGCCGGAATGTTGCCTGGAGTTGAATGCGCTAGACGGCGGCGGTTCCACCAGAGTATAACCTCATCGGACTCGCCGTCCACGGCGGCGAAATCAGGATCTACAAGAAGACCATCCTTCTGTTTGTACACAAGCAACCGTGATTTTCATCTCATTTCATCATCTTCTTCACAGCAACGGAGTTCGTCGAATCAAGCTTACGAGAACGAGAAACTTGGTGAAATTGCAAGAGAAGCTAAGGAACGGTTAGATGAAAGGTTGAGGACTCACAGAAAACCTGAAAATCCAAGGAGGAAGAGTGGGAATGAAGAAGTAGGGTGGAAGGAATCATCAGAAAAACATGGTAAAAAAAAAGAAAAAGCAAAGGGAAAAGAAGAAACAACAAGAAAGAAAAGATTGAGTTGGGGGAAGCTAATGAAATGGAAAGCCTTAGAGCAAGAAGAGTGCAGCATTTGTCTAGAACGGTTCAGAGTGGGCGAGCCGCTGGTCCATCTTCCATGCGCCCATAAGTTCCATTCCACCTGCTTGGTCCCTTGGCTCCAAGCCAATGCCCATTGCCCTTGCTGCAGGTTCCCTATTCCCTCTCGTTGACAAACCTAACTCTTCTTCTTTGTATCAAATCAAAGCCCCTTTTCTCCCATTTTAAGCCAACATAGCTGAAATGATATATATATATATATATATATATATATATATTAGCGATTGAGGGGTCGGTAGTTCAAATCTTCCTACTTTTATTGTACTAAGAAAATGTATTAGCTAGATAGGTTTAAAGGTTTAAAGGGGACGAGATAACCACGGTCTTACCATCAAATTATATGATATTAGGTAACCTTGTTTTGCT

Coding sequence (CDS)

ATGGCCGGAATGTTGCCTGGAGTTGAATGCGCTAGACGGCGGCGGTTCCACCAGAGTATAACCTCATCGGACTCGCCGTCCACGGCGGCGAAATCAGGATCTACAAGAAGACCATCCTTCTGTTTGTACACAAGCAACCGTGATTTTCATCTCATTTCATCATCTTCTTCACAGCAACGGAGTTCGTCGAATCAAGCTTACGAGAACGAGAAACTTGGTGAAATTGCAAGAGAAGCTAAGGAACGGTTAGATGAAAGGTTGAGGACTCACAGAAAACCTGAAAATCCAAGGAGGAAGAGTGGGAATGAAGAAGTAGGGTGGAAGGAATCATCAGAAAAACATGGTAAAAAAAAAGAAAAAGCAAAGGGAAAAGAAGAAACAACAAGAAAGAAAAGATTGAGTTGGGGGAAGCTAATGAAATGGAAAGCCTTAGAGCAAGAAGAGTGCAGCATTTGTCTAGAACGGTTCAGAGTGGGCGAGCCGCTGGTCCATCTTCCATGCGCCCATAAGTTCCATTCCACCTGCTTGGTCCCTTGGCTCCAAGCCAATGCCCATTGCCCTTGCTGCAGGTTCCCTATTCCCTCTCGTTGA

Protein sequence

MAGMLPGVECARRRRFHQSITSSDSPSTAAKSGSTRRPSFCLYTSNRDFHLISSSSSQQRSSSNQAYENEKLGEIAREAKERLDERLRTHRKPENPRRKSGNEEVGWKESSEKHGKKKEKAKGKEETTRKKRLSWGKLMKWKALEQEECSICLERFRVGEPLVHLPCAHKFHSTCLVPWLQANAHCPCCRFPIPSR

Homology

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BLAST of CcUC02G034490.1 vs. NCBI nr
Match: XP_038891102.1 (probable E3 ubiquitin-protein ligase RHY1A [Benincasa hispida])

HSP 1 Score: 339.0 bits (868), Expect = 2.8e-89
Identity = 171/197 (86.80%), Postives = 183/197 (92.89%), Query Frame = 0


Query: 1   MAGMLPGVECARRRRFHQSITSSDSPSTAAKSGSTRRPSFCLYTSNRDFHLISSSSSQQR 60
           MAGMLPGVECARRRRFHQSI SSDSPSTAAKSGSTRRPSFCLYTSNRDFH  SSSSSQ R
Sbjct: 1   MAGMLPGVECARRRRFHQSIASSDSPSTAAKSGSTRRPSFCLYTSNRDFHSTSSSSSQHR 60

Query: 61  SSSNQAYENEKLGEIAREAKERLDERLRTHRKPENPRRKSGNEEVGWKESSEKHGKKKEK 120
           SSSNQAY+NEKLGEIAREAKERLDERLRTHRKPEN RRKS NE+VGWK SSEK+G++KE+
Sbjct: 61  SSSNQAYQNEKLGEIAREAKERLDERLRTHRKPENSRRKSENEKVGWKGSSEKNGEEKER 120

Query: 121 AKGKEET--TRKKRLSWGKLMKWKALEQEECSICLERFRVGEPLVHLPCAHKFHSTCLVP 180
            KGKEE+    KKR +WGKLMKW+A EQEEC++CLERFRVGEPLVHLPCAHKFHSTCLVP
Sbjct: 121 TKGKEESIIITKKRFNWGKLMKWRASEQEECTVCLERFRVGEPLVHLPCAHKFHSTCLVP 180

Query: 181 WLQANAHCPCCRFPIPS 196
           WLQAN+HCPCCRFPIPS
Sbjct: 181 WLQANSHCPCCRFPIPS 197

[Close]

BLAST of CcUC02G034490.1 vs. NCBI nr
Match: XP_004139268.1 (probable E3 ubiquitin-protein ligase RHY1A [Cucumis sativus] >KGN60748.1 hypothetical protein Csa_019469 [Cucumis sativus])

HSP 1 Score: 314.3 bits (804), Expect = 7.4e-82
Identity = 167/197 (84.77%), Postives = 177/197 (89.85%), Query Frame = 0


Query: 1   MAGMLPGVECARRRRFHQSITSSDSPSTAAKSGSTRRPSFCLYTSNRDFHLISSSSSQQR 60
           MAGMLPGVECARRRRFHQSI SSDSP TA KSGSTRRPSFCLYTSNRDFHLISSSSSQQR
Sbjct: 1   MAGMLPGVECARRRRFHQSINSSDSPFTAGKSGSTRRPSFCLYTSNRDFHLISSSSSQQR 60

Query: 61  SSSNQAYENEKLGEIAREAKERLDERLRTHRKPENPRRKSGNEEVGWKESSEK-HGKKKE 120
           S +NQAY+N+KLGEIAREAKERLDERLRTHRKPEN R+K+ NEEV  KES EK +G+KKE
Sbjct: 61  SLTNQAYQNDKLGEIAREAKERLDERLRTHRKPENSRKKNNNEEVKGKESREKNNGEKKE 120

Query: 121 --KAKGKEETTRKKRLSWG-KLMKWKALEQEECSICLERFRVGEPLVHLPCAHKFHSTCL 180
               KGKEE T KKR SWG KLMKWKA EQEECS+CLERFR+ EPL+HLPCAHKFHSTCL
Sbjct: 121 MKNTKGKEEET-KKRFSWGRKLMKWKASEQEECSVCLERFRLSEPLLHLPCAHKFHSTCL 180

Query: 181 VPWLQANAHCPCCRFPI 194
           VPWLQANAHCPCCRFPI
Sbjct: 181 VPWLQANAHCPCCRFPI 196

[Close]

BLAST of CcUC02G034490.1 vs. NCBI nr
Match: KAG7030344.1 (putative E3 ubiquitin-protein ligase RHY1A, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 312.4 bits (799), Expect = 2.8e-81
Identity = 163/196 (83.16%), Postives = 172/196 (87.76%), Query Frame = 0


Query: 1   MAGMLPGVECARRRRFHQSITSSDSPSTAAKSGSTRRPSFCLYTSNRDFHLISSSS-SQQ 60
           MAGMLPGVECARRRRFHQSIT SD+PSTAAK GSTRRPSFCLYTSNRDFH+ SSSS SQQ
Sbjct: 1   MAGMLPGVECARRRRFHQSITLSDTPSTAAKLGSTRRPSFCLYTSNRDFHITSSSSCSQQ 60

Query: 61  RSSSNQAYENEKLGEIAREAKERLDERLRTHRKPENPRRKSGNEEVGWKESSEKHGKKKE 120
           RSSS+QAY+NEKLGEIAREAKERLDERLRTHRKPENPR+KSG    G K S E    KKE
Sbjct: 61  RSSSHQAYQNEKLGEIAREAKERLDERLRTHRKPENPRKKSGE---GLKNSLE----KKE 120

Query: 121 KAKGKEETTRKKRLSWGKLMKWKALEQEECSICLERFRVGEPLVHLPCAHKFHSTCLVPW 180
           KAKGKEE+  KKR +WGKLMKWKA EQEEC++CLE FR GEPLVHLPCAHKFHS CLVPW
Sbjct: 121 KAKGKEESITKKRFTWGKLMKWKASEQEECAVCLEGFRAGEPLVHLPCAHKFHSACLVPW 180

Query: 181 LQANAHCPCCRFPIPS 196
           LQ NAHCPCCRFP PS
Sbjct: 181 LQTNAHCPCCRFPFPS 189

[Close]

BLAST of CcUC02G034490.1 vs. NCBI nr
Match: XP_023538036.1 (probable E3 ubiquitin-protein ligase RHY1A [Cucurbita pepo subsp. pepo])

HSP 1 Score: 308.1 bits (788), Expect = 5.3e-80
Identity = 161/193 (83.42%), Postives = 169/193 (87.56%), Query Frame = 0


Query: 1   MAGMLPGVECARRRRFHQSITSSDSPSTAAKSGSTRRPSFCLYTSNRDFHLISSSSSQQR 60
           MAGMLPGVECARRRRFHQSITSSDS STAAK GSTRR SFCLYTSNRDFHL +SSSSQQR
Sbjct: 1   MAGMLPGVECARRRRFHQSITSSDSASTAAKLGSTRRSSFCLYTSNRDFHL-TSSSSQQR 60

Query: 61  SSSNQAYENEKLGEIAREAKERLDERLRTHRKPENPRRKSGNEEVGWKESSEKHGKKKEK 120
            SSN AY+NEKLG+ AREAKERLDERLRTHRKPEN R+KS +EEV         G KKEK
Sbjct: 61  CSSNHAYQNEKLGQAAREAKERLDERLRTHRKPENSRKKSSSEEV---------GLKKEK 120

Query: 121 AKGKEETTRKKRLSWGKLMKWKALEQEECSICLERFRVGEPLVHLPCAHKFHSTCLVPWL 180
           AKGKEETT KKR SWGKLMKWKA EQEEC++CLERFR  EPLVHLPCAHKFHSTCLVPWL
Sbjct: 121 AKGKEETTTKKRFSWGKLMKWKASEQEECTVCLERFRAVEPLVHLPCAHKFHSTCLVPWL 180

Query: 181 QANAHCPCCRFPI 194
           QANAHCPCCR+PI
Sbjct: 181 QANAHCPCCRYPI 183

[Close]

BLAST of CcUC02G034490.1 vs. NCBI nr
Match: XP_008456709.1 (PREDICTED: RING-H2 finger protein ATL16 [Cucumis melo])

HSP 1 Score: 305.8 bits (782), Expect = 2.6e-79
Identity = 165/195 (84.62%), Postives = 175/195 (89.74%), Query Frame = 0


Query: 1   MAGMLPGVECARRRRFHQSITSSDSPSTAAKSGSTRRPSFCLYTSNRDFHLISSSSSQQR 60
           MAGMLPGVECARRRRFH SI SSDSPSTAAKSGSTRRPSFCLYTSNRDFHLISSSSSQQR
Sbjct: 1   MAGMLPGVECARRRRFHHSINSSDSPSTAAKSGSTRRPSFCLYTSNRDFHLISSSSSQQR 60

Query: 61  SSSNQAYENEKLGEIAREAKERLDERLRTHRKPENPRRK-SGNEEVGWKESSEK-HGKKK 120
           S +N+A++NEKLGEIAREAKERLDERLRTHRKPEN R K S NEEV WKES EK +G++K
Sbjct: 61  SLTNKAHQNEKLGEIAREAKERLDERLRTHRKPENSRSKNSKNEEVKWKESREKNNGERK 120

Query: 121 E--KAKGKEETTRKKRLSWG-KLMKWKALEQEECSICLERFRVGEPLVHLPCAHKFHSTC 180
           E    KGKEE TR KR SWG KLMKWKA EQ+ECS+CLERFR GEPL+HLPCAHKFHSTC
Sbjct: 121 EMRSTKGKEEETR-KRFSWGRKLMKWKASEQDECSVCLERFRSGEPLLHLPCAHKFHSTC 180

Query: 181 LVPWLQANAHCPCCR 191
           LVPWLQANAHCPCCR
Sbjct: 181 LVPWLQANAHCPCCR 194

[Close]

BLAST of CcUC02G034490.1 vs. ExPASy Swiss-Prot
Match: Q6AVN2 (E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp. japonica OX=39947 GN=SIRP1 PE=1 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 3.2e-11
Identity = 26/54 (48.15%), Postives = 36/54 (66.67%), Query Frame = 0


Query: 142 KALEQEECSICLERFRVGEPLVHLPCAHKFHSTCLVPWLQANAHCPCCRFPIPS 196
           K  E   CS+CL+   VG     +PC HKFHS+C++PWL+ ++ CP CRF +PS
Sbjct: 192 KIEEVVSCSVCLDDLEVGSQAKQMPCEHKFHSSCILPWLELHSSCPVCRFELPS 245

[Close]

BLAST of CcUC02G034490.1 vs. ExPASy Swiss-Prot
Match: Q9C1X4 (Uncharacterized RING finger protein P32A8.03c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAP32A8.03c PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 4.6e-10
Identity = 22/49 (44.90%), Postives = 33/49 (67.35%), Query Frame = 0


Query: 145 EQEECSICLERFRVGEPLVHLPCAHKFHSTCLVPWLQANAHCPCCRFPI 194
           E+ EC+IC+E F++ + ++ LPC H FH  C+ PWL+ N  C  CR P+
Sbjct: 392 EEGECTICMEMFKINDDVIQLPCKHYFHENCIKPWLRVNGTCAICRAPV 440

[Close]

BLAST of CcUC02G034490.1 vs. ExPASy Swiss-Prot
Match: Q8LPN7 (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.0e-09
Identity = 21/51 (41.18%), Postives = 33/51 (64.71%), Query Frame = 0


Query: 145 EQEECSICLERFRVGEPLVHLPCAHKFHSTCLVPWLQANAHCPCCRFPIPS 196
           E  +C++C++ F  G  +  +PC H FH  CL+PWL+ +  CP CRF +P+
Sbjct: 212 EMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRFELPT 262

[Close]

BLAST of CcUC02G034490.1 vs. ExPASy Swiss-Prot
Match: Q08D68 (E3 ubiquitin-protein ligase ZNRF3 OS=Xenopus tropicalis OX=8364 GN=znrf3 PE=1 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 4.7e-07
Identity = 34/85 (40.00%), Postives = 46/85 (54.12%), Query Frame = 0


Query: 109 ESSEKHGKKKEKAKGKEETTRKKRLSWGKLMKWKALEQEECSICLERFRVGEPLVHLPCA 168
           ++ EK   +K KAKGK      +  S G L    +    +C+ICLE++  GE L  +PC 
Sbjct: 230 QALEKMETRKFKAKGKV----PREGSCGGLDTLSSSSTSDCAICLEKYIDGEELRVIPCT 289

Query: 169 HKFHSTCLVPWLQANAHCPCCRFPI 194
           H+FH  C+ PWL  N  CP CR  I
Sbjct: 290 HRFHKRCVDPWLLQNHTCPHCRHNI 310

[Close]

BLAST of CcUC02G034490.1 vs. ExPASy Swiss-Prot
Match: Q4KLR8 (E3 ubiquitin-protein ligase ZNRF3 OS=Xenopus laevis OX=8355 GN=znrf3 PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 6.2e-07
Identity = 34/85 (40.00%), Postives = 46/85 (54.12%), Query Frame = 0


Query: 109 ESSEKHGKKKEKAKGKEETTRKKRLSWGKLMKWKALEQEECSICLERFRVGEPLVHLPCA 168
           ++ EK   +K KAKGK      +  S G L    +    +C+ICLE++  GE L  +PC 
Sbjct: 166 QALEKMETRKFKAKGKV----SREGSCGGLDTLSSSSISDCAICLEKYIDGEELRVIPCT 225

Query: 169 HKFHSTCLVPWLQANAHCPCCRFPI 194
           H+FH  C+ PWL  N  CP CR  I
Sbjct: 226 HRFHKRCVDPWLLQNHTCPHCRHNI 246

[Close]

BLAST of CcUC02G034490.1 vs. ExPASy TrEMBL
Match: A0A0A0LG47 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G009360 PE=4 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 3.6e-82
Identity = 167/197 (84.77%), Postives = 177/197 (89.85%), Query Frame = 0


Query: 1   MAGMLPGVECARRRRFHQSITSSDSPSTAAKSGSTRRPSFCLYTSNRDFHLISSSSSQQR 60
           MAGMLPGVECARRRRFHQSI SSDSP TA KSGSTRRPSFCLYTSNRDFHLISSSSSQQR
Sbjct: 1   MAGMLPGVECARRRRFHQSINSSDSPFTAGKSGSTRRPSFCLYTSNRDFHLISSSSSQQR 60

Query: 61  SSSNQAYENEKLGEIAREAKERLDERLRTHRKPENPRRKSGNEEVGWKESSEK-HGKKKE 120
           S +NQAY+N+KLGEIAREAKERLDERLRTHRKPEN R+K+ NEEV  KES EK +G+KKE
Sbjct: 61  SLTNQAYQNDKLGEIAREAKERLDERLRTHRKPENSRKKNNNEEVKGKESREKNNGEKKE 120

Query: 121 --KAKGKEETTRKKRLSWG-KLMKWKALEQEECSICLERFRVGEPLVHLPCAHKFHSTCL 180
               KGKEE T KKR SWG KLMKWKA EQEECS+CLERFR+ EPL+HLPCAHKFHSTCL
Sbjct: 121 MKNTKGKEEET-KKRFSWGRKLMKWKASEQEECSVCLERFRLSEPLLHLPCAHKFHSTCL 180

Query: 181 VPWLQANAHCPCCRFPI 194
           VPWLQANAHCPCCRFPI
Sbjct: 181 VPWLQANAHCPCCRFPI 196

[Close]

BLAST of CcUC02G034490.1 vs. ExPASy TrEMBL
Match: A0A1S3C563 (RING-H2 finger protein ATL16 OS=Cucumis melo OX=3656 GN=LOC103496570 PE=4 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 1.3e-79
Identity = 165/195 (84.62%), Postives = 175/195 (89.74%), Query Frame = 0


Query: 1   MAGMLPGVECARRRRFHQSITSSDSPSTAAKSGSTRRPSFCLYTSNRDFHLISSSSSQQR 60
           MAGMLPGVECARRRRFH SI SSDSPSTAAKSGSTRRPSFCLYTSNRDFHLISSSSSQQR
Sbjct: 1   MAGMLPGVECARRRRFHHSINSSDSPSTAAKSGSTRRPSFCLYTSNRDFHLISSSSSQQR 60

Query: 61  SSSNQAYENEKLGEIAREAKERLDERLRTHRKPENPRRK-SGNEEVGWKESSEK-HGKKK 120
           S +N+A++NEKLGEIAREAKERLDERLRTHRKPEN R K S NEEV WKES EK +G++K
Sbjct: 61  SLTNKAHQNEKLGEIAREAKERLDERLRTHRKPENSRSKNSKNEEVKWKESREKNNGERK 120

Query: 121 E--KAKGKEETTRKKRLSWG-KLMKWKALEQEECSICLERFRVGEPLVHLPCAHKFHSTC 180
           E    KGKEE TR KR SWG KLMKWKA EQ+ECS+CLERFR GEPL+HLPCAHKFHSTC
Sbjct: 121 EMRSTKGKEEETR-KRFSWGRKLMKWKASEQDECSVCLERFRSGEPLLHLPCAHKFHSTC 180

Query: 181 LVPWLQANAHCPCCR 191
           LVPWLQANAHCPCCR
Sbjct: 181 LVPWLQANAHCPCCR 194

[Close]

BLAST of CcUC02G034490.1 vs. ExPASy TrEMBL
Match: A0A6J1G4D6 (probable E3 ubiquitin-protein ligase RHY1A OS=Cucurbita moschata OX=3662 GN=LOC111450678 PE=4 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 1.8e-78
Identity = 155/196 (79.08%), Postives = 164/196 (83.67%), Query Frame = 0


Query: 1   MAGMLPGVECARRRRFHQSITSSDSPSTAAKSGSTRRPSFCLYTSNRDFHLISSSS-SQQ 60
           MAGMLPGVECARRRRFHQSITSSD+PSTAAK GSTRRPSFCLYTSNRDFH+ SSSS SQQ
Sbjct: 1   MAGMLPGVECARRRRFHQSITSSDTPSTAAKLGSTRRPSFCLYTSNRDFHITSSSSCSQQ 60

Query: 61  RSSSNQAYENEKLGEIAREAKERLDERLRTHRKPENPRRKSGNEEVGWKESSEKHGKKKE 120
           RSSS+QAY+NEKLGEIAREAKERLDERLRTHRKPENPR+KSG    GW            
Sbjct: 61  RSSSHQAYQNEKLGEIAREAKERLDERLRTHRKPENPRKKSGE---GW------------ 120

Query: 121 KAKGKEETTRKKRLSWGKLMKWKALEQEECSICLERFRVGEPLVHLPCAHKFHSTCLVPW 180
               KEE+  KKR +WGKLMKWKA EQEEC++CLE FR GEPLVHLPCAHKFHS CLVPW
Sbjct: 121 ----KEESITKKRFTWGKLMKWKASEQEECAVCLEGFRAGEPLVHLPCAHKFHSACLVPW 177

Query: 181 LQANAHCPCCRFPIPS 196
           LQ NAHCPCCRFP PS
Sbjct: 181 LQTNAHCPCCRFPFPS 177

[Close]

BLAST of CcUC02G034490.1 vs. ExPASy TrEMBL
Match: A0A6J1HQI5 (probable E3 ubiquitin-protein ligase RHY1A isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111465688 PE=4 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 3.5e-77
Identity = 156/193 (80.83%), Postives = 164/193 (84.97%), Query Frame = 0


Query: 1   MAGMLPGVECARRRRFHQSITSSDSPSTAAKSGSTRRPSFCLYTSNRDFHLISSSSSQQR 60
           MAGMLPGVECARRRRFHQSITSS+S STAAK GSTRR SFCLYTSNRDFHL +SSSSQQR
Sbjct: 1   MAGMLPGVECARRRRFHQSITSSESASTAAKLGSTRRSSFCLYTSNRDFHL-TSSSSQQR 60

Query: 61  SSSNQAYENEKLGEIAREAKERLDERLRTHRKPENPRRKSGNEEVGWKESSEKHGKKKEK 120
            SSN AY+NEKLG+ AREAKERLDERLRTHRKPEN R KS +EEV           KKE 
Sbjct: 61  CSSNHAYQNEKLGQAAREAKERLDERLRTHRKPENSRTKSSSEEV---------RLKKEN 120

Query: 121 AKGKEETTRKKRLSWGKLMKWKALEQEECSICLERFRVGEPLVHLPCAHKFHSTCLVPWL 180
            KGKEETT KKR SWGKLMKWKA EQEEC++CLERFR  EPLVHLPCAHKFHS CLVPWL
Sbjct: 121 VKGKEETTTKKRFSWGKLMKWKASEQEECTVCLERFRAAEPLVHLPCAHKFHSMCLVPWL 180

Query: 181 QANAHCPCCRFPI 194
           QANAHCPCCR+PI
Sbjct: 181 QANAHCPCCRYPI 183

[Close]

BLAST of CcUC02G034490.1 vs. ExPASy TrEMBL
Match: A0A6J1FHS8 (E3 ubiquitin-protein ligase ZNRF3-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111444265 PE=4 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 3.5e-77
Identity = 155/193 (80.31%), Postives = 166/193 (86.01%), Query Frame = 0


Query: 1   MAGMLPGVECARRRRFHQSITSSDSPSTAAKSGSTRRPSFCLYTSNRDFHLISSSSSQQR 60
           MAGMLPGVECARRRRFHQSITSSDS STAAK GSTRR SFCLY SNRDFHL +SSSSQQR
Sbjct: 1   MAGMLPGVECARRRRFHQSITSSDSASTAAKLGSTRRSSFCLYASNRDFHL-TSSSSQQR 60

Query: 61  SSSNQAYENEKLGEIAREAKERLDERLRTHRKPENPRRKSGNEEVGWKESSEKHGKKKEK 120
            SSN AY++EKLG+ AREAKERLDERLRTHRKPEN R+KS +EEV         G KKEK
Sbjct: 61  CSSNHAYQDEKLGQAAREAKERLDERLRTHRKPENSRKKSSSEEV---------GLKKEK 120

Query: 121 AKGKEETTRKKRLSWGKLMKWKALEQEECSICLERFRVGEPLVHLPCAHKFHSTCLVPWL 180
           AKGKEETT KKR  WGKLMKWKA EQEEC++CLE+FR  EPLVHLPCAHKFHS CLVPWL
Sbjct: 121 AKGKEETTTKKRFGWGKLMKWKASEQEECTVCLEKFRATEPLVHLPCAHKFHSACLVPWL 180

Query: 181 QANAHCPCCRFPI 194
           QANA+CPCCR+PI
Sbjct: 181 QANAYCPCCRYPI 183

[Close]

BLAST of CcUC02G034490.1 vs. TAIR 10
Match: AT2G15580.1 (RING/U-box superfamily protein )

HSP 1 Score: 146.4 bits (368), Expect = 2.5e-35
Identity = 99/204 (48.53%), Postives = 128/204 (62.75%), Query Frame = 0


Query: 1   MAGMLPGVECARRRRFH---QSITSSDSPSTAAKSGS--TRRPSFCLYTSNRDFHLISSS 60
           MAGMLPGVECARRRRFH     I SS++ S AA +G   TRRPSF LYT+N + H    S
Sbjct: 1   MAGMLPGVECARRRRFHGGAPPIESSNTASVAAAAGHVWTRRPSFSLYTTNHESHQAHVS 60

Query: 61  SSQQRSSSNQAY---ENEKLGEIAREAKERLDERLRTHRKPENPRRKSGNEEVGWKESSE 120
            S +RS  N++Y    +EKL   A+EAK+RL++RLR       PR +   ++ G   +  
Sbjct: 61  FS-ERSVRNKSYGEDNDEKLDGAAKEAKQRLNKRLRI-----PPRTRQNGKDKG---NKL 120

Query: 121 KHGKKKEKAKGKEETTRKKRLSWGKLMKW---KALEQEECSICLERFRVGEPLVHLPCAH 180
           + GK K       E    K+ S G+LM+W   +  EQ++C+ICL+RF+ GE LVHLPCAH
Sbjct: 121 EQGKGKPLGDLPTEVVGLKK-SRGRLMEWFKRRVREQQDCAICLDRFKKGETLVHLPCAH 180

Query: 181 KFHSTCLVPWLQANAHCPCCRFPI 194
           KFHS CL+PWL  N +CP CR  I
Sbjct: 181 KFHSICLLPWLDTNVYCPYCRTDI 194

[Close]

BLAST of CcUC02G034490.1 vs. TAIR 10
Match: AT2G15580.2 (RING/U-box superfamily protein )

HSP 1 Score: 75.9 bits (185), Expect = 4.1e-14
Identity = 57/109 (52.29%), Postives = 70/109 (64.22%), Query Frame = 0


Query: 1   MAGMLPGVECARRRRFH---QSITSSDSPSTAAKSGS--TRRPSFCLYTSNRDFHLISSS 60
           MAGMLPGVECARRRRFH     I SS++ S AA +G   TRRPSF LYT+N + H    S
Sbjct: 1   MAGMLPGVECARRRRFHGGAPPIESSNTASVAAAAGHVWTRRPSFSLYTTNHESHQAHVS 60

Query: 61  SSQQRSSSNQAY---ENEKLGEIAREAKERLDERLRTHRKPENPRRKSG 102
            S +RS  N++Y    +EKL   A+EAK+RL++RLR       PR  SG
Sbjct: 61  FS-ERSVRNKSYGEDNDEKLDGAAKEAKQRLNKRLRI-----PPRTSSG 103

[Close]

BLAST of CcUC02G034490.1 vs. TAIR 10
Match: AT5G56340.1 (RING/U-box superfamily protein )

HSP 1 Score: 70.5 bits (171), Expect = 1.7e-12
Identity = 26/54 (48.15%), Postives = 36/54 (66.67%), Query Frame = 0


Query: 142 KALEQEECSICLERFRVGEPLVHLPCAHKFHSTCLVPWLQANAHCPCCRFPIPS 196
           K +E  +CS+CL+ F  G     +PC HKFH  C+VPWL+ ++ CP CRF +PS
Sbjct: 252 KIMEPLQCSVCLDDFEKGTEAKEMPCKHKFHVRCIVPWLELHSSCPVCRFELPS 305

[Close]

BLAST of CcUC02G034490.1 vs. TAIR 10
Match: AT1G55530.1 (RING/U-box superfamily protein )

HSP 1 Score: 69.3 bits (168), Expect = 3.8e-12
Identity = 25/54 (46.30%), Postives = 37/54 (68.52%), Query Frame = 0


Query: 142 KALEQEECSICLERFRVGEPLVHLPCAHKFHSTCLVPWLQANAHCPCCRFPIPS 196
           K  E  +CS+CL+ F +G     +PC HKFHS CL+PWL+ ++ CP CR+ +P+
Sbjct: 216 KIEETLQCSVCLDDFEIGTEAKLMPCTHKFHSDCLLPWLELHSSCPVCRYQLPA 269

[Close]

BLAST of CcUC02G034490.1 vs. TAIR 10
Match: AT3G13430.1 (RING/U-box superfamily protein )

HSP 1 Score: 68.6 bits (166), Expect = 6.6e-12
Identity = 23/48 (47.92%), Postives = 35/48 (72.92%), Query Frame = 0


Query: 148 ECSICLERFRVGEPLVHLPCAHKFHSTCLVPWLQANAHCPCCRFPIPS 196
           +CS+CL+ F +G     +PC HKFHS CL+PWL+ ++ CP CR+ +P+
Sbjct: 224 QCSVCLDDFEIGMEAKEMPCKHKFHSDCLLPWLELHSSCPVCRYLLPT 271

The following BLAST results are available for this feature:

BLAST of CcUC02G034490.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038891102.1	2.8e-89	86.80	probable E3 ubiquitin-protein ligase RHY1A [Benincasa hispida]	[more]
XP_004139268.1	7.4e-82	84.77	probable E3 ubiquitin-protein ligase RHY1A [Cucumis sativus] >KGN60748.1 hypothe...	[more]
KAG7030344.1	2.8e-81	83.16	putative E3 ubiquitin-protein ligase RHY1A, partial [Cucurbita argyrosperma subs...	[more]
XP_023538036.1	5.3e-80	83.42	probable E3 ubiquitin-protein ligase RHY1A [Cucurbita pepo subsp. pepo]	[more]
XP_008456709.1	2.6e-79	84.62	PREDICTED: RING-H2 finger protein ATL16 [Cucumis melo]	[more]

BLAST of CcUC02G034490.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6AVN2	3.2e-11	48.15	E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp. japonica OX=39947 GN=SI...	[more]
Q9C1X4	4.6e-10	44.90	Uncharacterized RING finger protein P32A8.03c OS=Schizosaccharomyces pombe (stra...	[more]
Q8LPN7	1.0e-09	41.18	E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19...	[more]
Q08D68	4.7e-07	40.00	E3 ubiquitin-protein ligase ZNRF3 OS=Xenopus tropicalis OX=8364 GN=znrf3 PE=1 SV...	[more]
Q4KLR8	6.2e-07	40.00	E3 ubiquitin-protein ligase ZNRF3 OS=Xenopus laevis OX=8355 GN=znrf3 PE=2 SV=1	[more]

BLAST of CcUC02G034490.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LG47	3.6e-82	84.77	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G009360 P...	[more]
A0A1S3C563	1.3e-79	84.62	RING-H2 finger protein ATL16 OS=Cucumis melo OX=3656 GN=LOC103496570 PE=4 SV=1	[more]
A0A6J1G4D6	1.8e-78	79.08	probable E3 ubiquitin-protein ligase RHY1A OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1HQI5	3.5e-77	80.83	probable E3 ubiquitin-protein ligase RHY1A isoform X1 OS=Cucurbita maxima OX=366...	[more]
A0A6J1FHS8	3.5e-77	80.31	E3 ubiquitin-protein ligase ZNRF3-like isoform X1 OS=Cucurbita moschata OX=3662 ...	[more]

BLAST of CcUC02G034490.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G15580.1	2.5e-35	48.53	RING/U-box superfamily protein	[more]
AT2G15580.2	4.1e-14	52.29	RING/U-box superfamily protein	[more]
AT5G56340.1	1.7e-12	48.15	RING/U-box superfamily protein	[more]
AT1G55530.1	3.8e-12	46.30	RING/U-box superfamily protein	[more]
AT3G13430.1	6.6e-12	47.92	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 149..189 e-value: 3.5E-5 score: 33.2
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 148..190 e-value: 1.3E-11 score: 44.7
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 149..190 score: 12.445019
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 102..195 e-value: 1.8E-18 score: 68.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..39
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 71..129
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..39
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..129
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..69
None	No IPR available	PANTHER	PTHR22765:SF204	RING/U-BOX SUPERFAMILY PROTEIN	coord: 1..190
None	No IPR available	PANTHER	PTHR22765	RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING	coord: 1..190
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 148..190 e-value: 4.14449E-17 score: 69.6381
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 136..194

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CcUC02G034490	CcUC02G034490	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC02G034490.1-exon	CcUC02G034490.1-exon-CicolChr02:30315785..30316338	exon
CcUC02G034490.1-exon	CcUC02G034490.1-exon-CicolChr02:30318557..30318672	exon
CcUC02G034490.1-exon	CcUC02G034490.1-exon-CicolChr02:30318773..30319889	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC02G034490.1-three_prime_utr	CcUC02G034490.1-three_prime_utr-CicolChr02:30315785..30316037	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC02G034490.1-cds	CcUC02G034490.1-cds-CicolChr02:30316038..30316338	CDS
CcUC02G034490.1-cds	CcUC02G034490.1-cds-CicolChr02:30318557..30318672	CDS
CcUC02G034490.1-cds	CcUC02G034490.1-cds-CicolChr02:30318773..30318946	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC02G034490.1-five_prime_utr	CcUC02G034490.1-five_prime_utr-CicolChr02:30318947..30319889	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CcUC02G034490.1	CcUC02G034490.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
molecular_function	GO:0061630	ubiquitin protein ligase activity