CcUC02G029780.1 (mRNA) Watermelon (PI 537277) v1

Overview


Name	CcUC02G029780.1
Type	mRNA
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	HTH-type transcriptional regulator protein ptxE
Location	CicolChr02: 25062964 .. 25063437 (+)
Sequence length	474
RNA-Seq Expression	CcUC02G029780.1
Synteny	CcUC02G029780.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCATTTGTGTGTCGTCAGATTCGATCAATGTTGCTACAGCTAAATTGATTCTTACAGATGGAACTTTGGTCGAATTCTCTTACCCAGTTAAGGTTTCTTATGTGCTACAGAAACATCCGGCGAGATTTATCTGCAACTCCGACGAGATGGACTTTGACGACGTCGTTTATGCCGTTGACGACGACGATGAGCTCCAACTGGGGCAGCTTTACTTTGCGTTGCCGTTGGACAGGCTGAACCAGCCGCTTCAGGCGGAGGAAATGGCGGCATTGGCCGTCAAGGCCAGTGCGGCGCTTATGAAGGCCGGCGGTGGAGGGCCGGAAAAATGTGGATCTAGGCGGACGGCGATTTCTCCGGTGGCGTTTTCCGATGAGGAGTTTAGGAAGGTTCCAAGAAGGGGATTGAAGAAGGGAATGGGGAGTGGTAGAAGTAGAAAATTTACGGCGAAATTGAGTGCAATTCCGGAATAA

mRNA sequence

ATGGGCATTTGTGTGTCGTCAGATTCGATCAATGTTGCTACAGCTAAATTGATTCTTACAGATGGAACTTTGGTCGAATTCTCTTACCCAGTTAAGGTTTCTTATGTGCTACAGAAACATCCGGCGAGATTTATCTGCAACTCCGACGAGATGGACTTTGACGACGTCGTTTATGCCGTTGACGACGACGATGAGCTCCAACTGGGGCAGCTTTACTTTGCGTTGCCGTTGGACAGGCTGAACCAGCCGCTTCAGGCGGAGGAAATGGCGGCATTGGCCGTCAAGGCCAGTGCGGCGCTTATGAAGGCCGGCGGTGGAGGGCCGGAAAAATGTGGATCTAGGCGGACGGCGATTTCTCCGGTGGCGTTTTCCGATGAGGAGTTTAGGAAGGTTCCAAGAAGGGGATTGAAGAAGGGAATGGGGAGTGGTAGAAGTAGAAAATTTACGGCGAAATTGAGTGCAATTCCGGAATAA

Coding sequence (CDS)

ATGGGCATTTGTGTGTCGTCAGATTCGATCAATGTTGCTACAGCTAAATTGATTCTTACAGATGGAACTTTGGTCGAATTCTCTTACCCAGTTAAGGTTTCTTATGTGCTACAGAAACATCCGGCGAGATTTATCTGCAACTCCGACGAGATGGACTTTGACGACGTCGTTTATGCCGTTGACGACGACGATGAGCTCCAACTGGGGCAGCTTTACTTTGCGTTGCCGTTGGACAGGCTGAACCAGCCGCTTCAGGCGGAGGAAATGGCGGCATTGGCCGTCAAGGCCAGTGCGGCGCTTATGAAGGCCGGCGGTGGAGGGCCGGAAAAATGTGGATCTAGGCGGACGGCGATTTCTCCGGTGGCGTTTTCCGATGAGGAGTTTAGGAAGGTTCCAAGAAGGGGATTGAAGAAGGGAATGGGGAGTGGTAGAAGTAGAAAATTTACGGCGAAATTGAGTGCAATTCCGGAATAA

Protein sequence

MGICVSSDSINVATAKLILTDGTLVEFSYPVKVSYVLQKHPARFICNSDEMDFDDVVYAVDDDDELQLGQLYFALPLDRLNQPLQAEEMAALAVKASAALMKAGGGGPEKCGSRRTAISPVAFSDEEFRKVPRRGLKKGMGSGRSRKFTAKLSAIPE

Homology

[Close]

BLAST of CcUC02G029780.1 vs. NCBI nr
Match: XP_038902080.1 (uncharacterized protein LOC120088720 [Benincasa hispida])

HSP 1 Score: 282.3 bits (721), Expect = 2.5e-72
Identity = 147/157 (93.63%), Postives = 151/157 (96.18%), Query Frame = 0


Query: 1   MGICVSSDSINVATAKLILTDGTLVEFSYPVKVSYVLQKHPARFICNSDEMDFDDVVYAV 60
           MGICVSSD+INVATAKLILTDGTLVEFSYPVKVSY+LQKHPA FICNSDEMDFDDVVYAV
Sbjct: 1   MGICVSSDAINVATAKLILTDGTLVEFSYPVKVSYILQKHPASFICNSDEMDFDDVVYAV 60

Query: 61  DDDDELQLGQLYFALPLDRLNQPLQAEEMAALAVKASAALMKAGGGGPEKCGSRRTAISP 120
           DDDDELQLGQLYFALPLDRLNQPLQAEEMAALAVKAS+ALMKAGGGG EKCGSRRTAISP
Sbjct: 61  DDDDELQLGQLYFALPLDRLNQPLQAEEMAALAVKASSALMKAGGGGTEKCGSRRTAISP 120

Query: 121 VAFSDEEFRKVPRRGLKKGMGSGRSRKFTAKLSAIPE 158
           V FSDEEFRK PR+GLKK  GSGRSRKFTAKLSAIPE
Sbjct: 121 VTFSDEEFRKGPRKGLKK--GSGRSRKFTAKLSAIPE 155

[Close]

BLAST of CcUC02G029780.1 vs. NCBI nr
Match: XP_022971678.1 (uncharacterized protein LOC111470350 [Cucurbita maxima])

HSP 1 Score: 253.8 bits (647), Expect = 9.5e-64
Identity = 131/157 (83.44%), Postives = 141/157 (89.81%), Query Frame = 0


Query: 1   MGICVSSDSINVATAKLILTDGTLVEFSYPVKVSYVLQKHPARFICNSDEMDFDDVVYAV 60
           MGIC+SSDS+NVATAKLILTDGTL+EFSYPVKVS++L KHPA FICNSD+MDFDD VYAV
Sbjct: 1   MGICISSDSVNVATAKLILTDGTLLEFSYPVKVSFLLHKHPATFICNSDDMDFDDAVYAV 60

Query: 61  DDDDELQLGQLYFALPLDRLNQPLQAEEMAALAVKASAALMKAGGGGPEKCGSRRTAISP 120
            DDD LQLG LYFALPLDRLNQPL  EEMAALAVKAS+AL+KAG GG EK GSRRTA+SP
Sbjct: 61  HDDDHLQLGHLYFALPLDRLNQPLHPEEMAALAVKASSALIKAGAGGTEKSGSRRTAVSP 120

Query: 121 VAFSDEEFRKVPRRGLKKGMGSGRSRKFTAKLSAIPE 158
           VAFSDEEFRK PRRGL+K  GSGR RKF AKLSAIPE
Sbjct: 121 VAFSDEEFRKPPRRGLQK--GSGRGRKFRAKLSAIPE 155

[Close]

BLAST of CcUC02G029780.1 vs. NCBI nr
Match: XP_023512544.1 (uncharacterized protein LOC111777254 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 248.8 bits (634), Expect = 3.0e-62
Identity = 128/157 (81.53%), Postives = 139/157 (88.54%), Query Frame = 0


Query: 1   MGICVSSDSINVATAKLILTDGTLVEFSYPVKVSYVLQKHPARFICNSDEMDFDDVVYAV 60
           MGIC+SSDS+NVATAKLILTDGTL+EFSYPVKVS++L KHPA FICNSD+MDFDD VYAV
Sbjct: 1   MGICISSDSVNVATAKLILTDGTLLEFSYPVKVSFLLHKHPATFICNSDDMDFDDAVYAV 60

Query: 61  DDDDELQLGQLYFALPLDRLNQPLQAEEMAALAVKASAALMKAGGGGPEKCGSRRTAISP 120
            DDD LQLG LYFALPLDRLNQPL  EEMAALAVKAS+AL+KAG GG EK GSRRTA+SP
Sbjct: 61  HDDDHLQLGHLYFALPLDRLNQPLHPEEMAALAVKASSALIKAGAGGTEKSGSRRTAVSP 120

Query: 121 VAFSDEEFRKVPRRGLKKGMGSGRSRKFTAKLSAIPE 158
           +AFSDEEFRK PRR L+KG G G  RKF AKLSAIPE
Sbjct: 121 LAFSDEEFRKPPRRSLQKGSGGG--RKFRAKLSAIPE 155

[Close]

BLAST of CcUC02G029780.1 vs. NCBI nr
Match: XP_022928071.1 (uncharacterized protein LOC111434966 [Cucurbita moschata] >KAG6571423.1 hypothetical protein SDJN03_30338, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011189.1 hypothetical protein SDJN02_27987, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 246.1 bits (627), Expect = 2.0e-61
Identity = 127/157 (80.89%), Postives = 138/157 (87.90%), Query Frame = 0


Query: 1   MGICVSSDSINVATAKLILTDGTLVEFSYPVKVSYVLQKHPARFICNSDEMDFDDVVYAV 60
           MGIC+SSDS+NVATAKLILTDGTL+EFSYPVKVS++L KHPA FICNSD+MDFDD VYAV
Sbjct: 1   MGICISSDSVNVATAKLILTDGTLLEFSYPVKVSFLLHKHPATFICNSDDMDFDDAVYAV 60

Query: 61  DDDDELQLGQLYFALPLDRLNQPLQAEEMAALAVKASAALMKAGGGGPEKCGSRRTAISP 120
            DDD LQLG LYFALPLDRLNQPL  EEMAALAVKAS+AL+KAG GG EK GSRRTA+SP
Sbjct: 61  HDDDHLQLGHLYFALPLDRLNQPLHPEEMAALAVKASSALIKAGAGGTEKSGSRRTAVSP 120

Query: 121 VAFSDEEFRKVPRRGLKKGMGSGRSRKFTAKLSAIPE 158
           +AFSDEEFRK P R L+KG G G  RKF AKLSAIPE
Sbjct: 121 LAFSDEEFRKPPGRSLQKGSGGG--RKFRAKLSAIPE 155

[Close]

BLAST of CcUC02G029780.1 vs. NCBI nr
Match: XP_022149511.1 (uncharacterized protein LOC111017924 [Momordica charantia])

HSP 1 Score: 245.7 bits (626), Expect = 2.6e-61
Identity = 134/157 (85.35%), Postives = 138/157 (87.90%), Query Frame = 0


Query: 1   MGICVSSDSINVATAKLILTDGTLVEFSYPVKVSYVLQKHPARFICNSDEMDFDDVVYAV 60
           MGIC+SSDS NVATAKLILTDGTL+E+SYPVKVSYVLQK PA FICNSDEMDFDDVV A+
Sbjct: 1   MGICISSDSTNVATAKLILTDGTLLEYSYPVKVSYVLQKDPASFICNSDEMDFDDVVSAI 60

Query: 61  DDDDELQLGQLYFALPLDRLNQPLQAEEMAALAVKASAALMKAGGGGPEKCGSRRTAISP 120
           DD DELQLGQLYFALPLDRLNQPL AEEMAALAVKASAALMKAGG   EKCGSRRTAISP
Sbjct: 61  DDGDELQLGQLYFALPLDRLNQPLHAEEMAALAVKASAALMKAGG---EKCGSRRTAISP 120

Query: 121 VAFSDEEFRKVPRRGLKKGMGSGRSRKFTAKLSAIPE 158
             FSDEEF KV R   KK  GSGR RKFTAKLSAIPE
Sbjct: 121 ALFSDEEFGKVQRSVAKK--GSGRRRKFTAKLSAIPE 152

[Close]

BLAST of CcUC02G029780.1 vs. ExPASy TrEMBL
Match: A0A6J1I7K7 (uncharacterized protein LOC111470350 OS=Cucurbita maxima OX=3661 GN=LOC111470350 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 4.6e-64
Identity = 131/157 (83.44%), Postives = 141/157 (89.81%), Query Frame = 0


Query: 1   MGICVSSDSINVATAKLILTDGTLVEFSYPVKVSYVLQKHPARFICNSDEMDFDDVVYAV 60
           MGIC+SSDS+NVATAKLILTDGTL+EFSYPVKVS++L KHPA FICNSD+MDFDD VYAV
Sbjct: 1   MGICISSDSVNVATAKLILTDGTLLEFSYPVKVSFLLHKHPATFICNSDDMDFDDAVYAV 60

Query: 61  DDDDELQLGQLYFALPLDRLNQPLQAEEMAALAVKASAALMKAGGGGPEKCGSRRTAISP 120
            DDD LQLG LYFALPLDRLNQPL  EEMAALAVKAS+AL+KAG GG EK GSRRTA+SP
Sbjct: 61  HDDDHLQLGHLYFALPLDRLNQPLHPEEMAALAVKASSALIKAGAGGTEKSGSRRTAVSP 120

Query: 121 VAFSDEEFRKVPRRGLKKGMGSGRSRKFTAKLSAIPE 158
           VAFSDEEFRK PRRGL+K  GSGR RKF AKLSAIPE
Sbjct: 121 VAFSDEEFRKPPRRGLQK--GSGRGRKFRAKLSAIPE 155

[Close]

BLAST of CcUC02G029780.1 vs. ExPASy TrEMBL
Match: A0A6J1EJ90 (uncharacterized protein LOC111434966 OS=Cucurbita moschata OX=3662 GN=LOC111434966 PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 9.6e-62
Identity = 127/157 (80.89%), Postives = 138/157 (87.90%), Query Frame = 0


Query: 1   MGICVSSDSINVATAKLILTDGTLVEFSYPVKVSYVLQKHPARFICNSDEMDFDDVVYAV 60
           MGIC+SSDS+NVATAKLILTDGTL+EFSYPVKVS++L KHPA FICNSD+MDFDD VYAV
Sbjct: 1   MGICISSDSVNVATAKLILTDGTLLEFSYPVKVSFLLHKHPATFICNSDDMDFDDAVYAV 60

Query: 61  DDDDELQLGQLYFALPLDRLNQPLQAEEMAALAVKASAALMKAGGGGPEKCGSRRTAISP 120
            DDD LQLG LYFALPLDRLNQPL  EEMAALAVKAS+AL+KAG GG EK GSRRTA+SP
Sbjct: 61  HDDDHLQLGHLYFALPLDRLNQPLHPEEMAALAVKASSALIKAGAGGTEKSGSRRTAVSP 120

Query: 121 VAFSDEEFRKVPRRGLKKGMGSGRSRKFTAKLSAIPE 158
           +AFSDEEFRK P R L+KG G G  RKF AKLSAIPE
Sbjct: 121 LAFSDEEFRKPPGRSLQKGSGGG--RKFRAKLSAIPE 155

[Close]

BLAST of CcUC02G029780.1 vs. ExPASy TrEMBL
Match: A0A6J1D8L2 (uncharacterized protein LOC111017924 OS=Momordica charantia OX=3673 GN=LOC111017924 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 1.2e-61
Identity = 134/157 (85.35%), Postives = 138/157 (87.90%), Query Frame = 0


Query: 1   MGICVSSDSINVATAKLILTDGTLVEFSYPVKVSYVLQKHPARFICNSDEMDFDDVVYAV 60
           MGIC+SSDS NVATAKLILTDGTL+E+SYPVKVSYVLQK PA FICNSDEMDFDDVV A+
Sbjct: 1   MGICISSDSTNVATAKLILTDGTLLEYSYPVKVSYVLQKDPASFICNSDEMDFDDVVSAI 60

Query: 61  DDDDELQLGQLYFALPLDRLNQPLQAEEMAALAVKASAALMKAGGGGPEKCGSRRTAISP 120
           DD DELQLGQLYFALPLDRLNQPL AEEMAALAVKASAALMKAGG   EKCGSRRTAISP
Sbjct: 61  DDGDELQLGQLYFALPLDRLNQPLHAEEMAALAVKASAALMKAGG---EKCGSRRTAISP 120

Query: 121 VAFSDEEFRKVPRRGLKKGMGSGRSRKFTAKLSAIPE 158
             FSDEEF KV R   KK  GSGR RKFTAKLSAIPE
Sbjct: 121 ALFSDEEFGKVQRSVAKK--GSGRRRKFTAKLSAIPE 152

[Close]

BLAST of CcUC02G029780.1 vs. ExPASy TrEMBL
Match: A0A6J1L0H7 (uncharacterized protein LOC111499928 OS=Cucurbita maxima OX=3661 GN=LOC111499928 PE=4 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 2.0e-59
Identity = 124/157 (78.98%), Postives = 140/157 (89.17%), Query Frame = 0


Query: 1   MGICVSSDSINVATAKLILTDGTLVEFSYPVKVSYVLQKHPARFICNSDEMDFDDVVYAV 60
           MGIC+SSDS NV+TAKLIL+DGTL+E+SYPVKVSYVLQK PA FICNSD+MDF+DVV AV
Sbjct: 1   MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLQKDPASFICNSDDMDFNDVVNAV 60

Query: 61  DDDDELQLGQLYFALPLDRLNQPLQAEEMAALAVKASAALMKAGGGGPEKCGSRRTAISP 120
           DD+DELQLGQLYFALPL++LN+PL AE+MAALAVKAS+ALMKAGGGG EKCGSRR    P
Sbjct: 61  DDEDELQLGQLYFALPLEKLNKPLHAEDMAALAVKASSALMKAGGGGSEKCGSRR----P 120

Query: 121 VAFSDEEFRKVPRRGLKKGMGSGRSRKFTAKLSAIPE 158
           V FS+EE RK PRRG+KKG  +G SRKFTAKL AIPE
Sbjct: 121 VVFSEEELRKGPRRGVKKGTRNGGSRKFTAKLCAIPE 153

[Close]

BLAST of CcUC02G029780.1 vs. ExPASy TrEMBL
Match: A0A6J1G7I2 (uncharacterized protein LOC111451454 OS=Cucurbita moschata OX=3662 GN=LOC111451454 PE=4 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 2.0e-59
Identity = 124/157 (78.98%), Postives = 139/157 (88.54%), Query Frame = 0


Query: 1   MGICVSSDSINVATAKLILTDGTLVEFSYPVKVSYVLQKHPARFICNSDEMDFDDVVYAV 60
           MGIC+SSDS NV+TAKLIL+DGTL+E+SYPVKVSYVL K PA FICNSD+MDF+DVV AV
Sbjct: 1   MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPASFICNSDDMDFNDVVTAV 60

Query: 61  DDDDELQLGQLYFALPLDRLNQPLQAEEMAALAVKASAALMKAGGGGPEKCGSRRTAISP 120
           DDDDELQLGQLYFALPL++LN+PL AE+MAALAVKAS+ALMKAGGGG EKCGSRR     
Sbjct: 61  DDDDELQLGQLYFALPLEKLNKPLHAEDMAALAVKASSALMKAGGGGSEKCGSRRA---- 120

Query: 121 VAFSDEEFRKVPRRGLKKGMGSGRSRKFTAKLSAIPE 158
           V FS+EE RK PR+G+KKG GSG SRKFTAKL AIPE
Sbjct: 121 VVFSEEELRKGPRKGVKKGTGSGGSRKFTAKLCAIPE 153

[Close]

BLAST of CcUC02G029780.1 vs. TAIR 10
Match: AT2G23690.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G37240.1); Has 243 Blast hits to 243 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 241; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 169.5 bits (428), Expect = 2.2e-42
Identity = 96/163 (58.90%), Postives = 115/163 (70.55%), Query Frame = 0


Query: 1   MGICVSSDSINVATAKLILTDGTLVEFSYPVKVSYVLQKHPARFICNSDEMDFDDVVYAV 60
           MGIC S +S  VATAKLIL DG ++EF+ PVKV YVLQK+P  FICNSD+MDFD+VV A+
Sbjct: 1   MGICSSYESTQVATAKLILHDGRMMEFTSPVKVGYVLQKNPMCFICNSDDMDFDNVVSAI 60

Query: 61  DDDDELQLGQLYFALPLDRLNQPLQAEEMAALAVKASAALMKAGGG-GPEKCGSRRTAIS 120
             D+E QLGQLYFALPL  L+  L+AEEMAALAVKAS+ALM++GG  G +KC  RR  +S
Sbjct: 61  SADEEFQLGQLYFALPLSSLHHSLKAEEMAALAVKASSALMRSGGSCGRDKCRCRRKCVS 120

Query: 121 PVAFSDEEFRKV-----PRRGLKKGMGSGRSRKFTAKLSAIPE 158
           PV FS      V      R G ++G G    RK+ AKLS I E
Sbjct: 121 PVIFSARRVAAVGANGETRNGKRRGGGGSGRRKYAAKLSKIEE 163

[Close]

BLAST of CcUC02G029780.1 vs. TAIR 10
Match: AT4G37240.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G23690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 153.7 bits (387), Expect = 1.2e-37
Identity = 88/146 (60.27%), Postives = 105/146 (71.92%), Query Frame = 0


Query: 1   MGICVSSDSINVATAKLILTDGTLVEFSYPVKVSYVLQKHPARFICNSDEMDFDDVVYAV 60
           MGIC SS+S  VATAKLIL DG ++EF+ PVKV YVL K+P  FICNSD+MDFDD V A+
Sbjct: 1   MGICSSSESTQVATAKLILQDGRMMEFANPVKVGYVLLKYPMCFICNSDDMDFDDAVAAI 60

Query: 61  DDDDELQLGQLYFALPLDRLNQPLQAEEMAALAVKASAALMKAGGGGPEKCGSRRTAISP 120
             D+ELQLGQ+YFALPL  L QPL+AEEMAALAVKAS+ALM+ GGG     G RR  + P
Sbjct: 61  SADEELQLGQIYFALPLCWLRQPLKAEEMAALAVKASSALMRGGGG-----GCRRKCVEP 120

Query: 121 VAFSDEEFRKVPRRGLKKGMGSGRSR 147
           +  SD+   +V       G GSGR +
Sbjct: 121 IV-SDKLRMRVGSGDDTVGSGSGRRK 140

[Close]

BLAST of CcUC02G029780.1 vs. TAIR 10
Match: AT3G50800.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G66580.1); Has 249 Blast hits to 249 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 249; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 144.1 bits (362), Expect = 9.8e-35
Identity = 87/165 (52.73%), Postives = 109/165 (66.06%), Query Frame = 0


Query: 1   MGICVSSDSINVATAKLILTDGTLVEFSYPVKVSYVLQKHPARFICNSDEMDFDDVVYAV 60
           MG C S +S    TAKLIL DGTL EFS PVKV  +LQK+P  F+CNSD+MDFDD V AV
Sbjct: 1   MGACASRESRRTETAKLILPDGTLQEFSTPVKVWQILQKNPTSFVCNSDDMDFDDAVLAV 60

Query: 61  DDDDELQLGQLYFALPLDRLNQPLQAEEMAALAVKASAALMKAGGGGPEKCGSRRTAISP 120
              ++L+ G+LYF LPL  LN PL+A+EMAALAVKAS+AL K+GGGG             
Sbjct: 61  PGSEDLRPGELYFVLPLTWLNHPLRADEMAALAVKASSALAKSGGGG------------- 120

Query: 121 VAFSDEE-----FRKVPRRGL-KKGMGSGRS--RKFTAKLSAIPE 158
           ++++DE+      R+V R G   +G G G    RKFTA+LS+I E
Sbjct: 121 LSYNDEDVGECRVRRVKRNGCGGRGCGGGGKGRRKFTAELSSIAE 152

[Close]

BLAST of CcUC02G029780.1 vs. TAIR 10
Match: AT5G66580.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G50800.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 144.1 bits (362), Expect = 9.8e-35
Identity = 87/162 (53.70%), Postives = 106/162 (65.43%), Query Frame = 0


Query: 1   MGICVSSDSINVATAKLILTDGTLVEFSYPVKVSYVLQKHPARFICNSDEMDFDDVVYAV 60
           MG C S +S+   +AKLIL DGTL EFS PVKV  +LQK+P  F+CNSDEMDFDD V AV
Sbjct: 1   MGACASRESLRSDSAKLILLDGTLQEFSSPVKVWQILQKNPTSFVCNSDEMDFDDAVSAV 60

Query: 61  DDDDELQLGQLYFALPLDRLNQPLQAEEMAALAVKASAALMKAGGGGPEKCGSRRTAISP 120
             ++EL+ GQLYF LPL  LN PL+AEEMAALAVKAS+AL K+GG G        +    
Sbjct: 61  AGNEELRSGQLYFVLPLTWLNHPLRAEEMAALAVKASSALTKSGGVG------WVSGDDD 120

Query: 121 VAFSDEEFRKVPRRGLKKGMGSGR-----SRKFTAKLSAIPE 158
           V  S++ ++K    G+K   G GR      R+FTA LS I E
Sbjct: 121 VTTSEKTYQKKNIAGVKTNGGGGRGCGKGKRRFTANLSTIAE 156

[Close]

BLAST of CcUC02G029780.1 vs. TAIR 10
Match: AT1G76600.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G21010.1); Has 220 Blast hits to 220 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 220; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 80.9 bits (198), Expect = 1.0e-15
Identity = 54/136 (39.71%), Postives = 77/136 (56.62%), Query Frame = 0


Query: 1   MGICVSSDS----INVATAKLILTDGTLVEFSYPVKVSYVLQKH----------PARFIC 60
           MG+CVS +      +  TAK++  +G L E+  PV  S VL+             + F+C
Sbjct: 1   MGLCVSVNRNEYVSSSTTAKIVTINGDLREYDVPVLASQVLESESTSSSSSSSSSSYFLC 60

Query: 61  NSDEMDFDDVVYAVDDDDELQLGQLYFALPLDRLNQPLQAEEMAALAVKASAALMKAGGG 120
           NSD + +DD + A++ D+ LQ  Q+YF LP+ +    L A +MAALAVKAS A+ KA G 
Sbjct: 61  NSDSLYYDDFIPAIESDEILQANQIYFVLPISKRQYRLSASDMAALAVKASVAIEKAAG- 120

Query: 121 GPEKCGSRRTA-ISPV 122
             +K   RR+  ISPV
Sbjct: 121 --KKNRRRRSGRISPV 133

The following BLAST results are available for this feature:

BLAST of CcUC02G029780.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038902080.1	2.5e-72	93.63	uncharacterized protein LOC120088720 [Benincasa hispida]	[more]
XP_022971678.1	9.5e-64	83.44	uncharacterized protein LOC111470350 [Cucurbita maxima]	[more]
XP_023512544.1	3.0e-62	81.53	uncharacterized protein LOC111777254 [Cucurbita pepo subsp. pepo]	[more]
XP_022928071.1	2.0e-61	80.89	uncharacterized protein LOC111434966 [Cucurbita moschata] >KAG6571423.1 hypothet...	[more]
XP_022149511.1	2.6e-61	85.35	uncharacterized protein LOC111017924 [Momordica charantia]	[more]

BLAST of CcUC02G029780.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CcUC02G029780.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I7K7	4.6e-64	83.44	uncharacterized protein LOC111470350 OS=Cucurbita maxima OX=3661 GN=LOC111470350...	[more]
A0A6J1EJ90	9.6e-62	80.89	uncharacterized protein LOC111434966 OS=Cucurbita moschata OX=3662 GN=LOC1114349...	[more]
A0A6J1D8L2	1.2e-61	85.35	uncharacterized protein LOC111017924 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]
A0A6J1L0H7	2.0e-59	78.98	uncharacterized protein LOC111499928 OS=Cucurbita maxima OX=3661 GN=LOC111499928...	[more]
A0A6J1G7I2	2.0e-59	78.98	uncharacterized protein LOC111451454 OS=Cucurbita moschata OX=3662 GN=LOC1114514...	[more]

BLAST of CcUC02G029780.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G23690.1	2.2e-42	58.90	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT4G37240.1	1.2e-37	60.27	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT3G50800.1	9.8e-35	52.73	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT5G66580.1	9.8e-35	53.70	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT1G76600.1	1.0e-15	39.71	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 1..157 e-value: 5.1E-25 score: 88.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 135..157
None	No IPR available	PANTHER	PTHR33052	DUF4228 DOMAIN PROTEIN-RELATED	coord: 1..157
None	No IPR available	PANTHER	PTHR33052:SF128	HTH-TYPE TRANSCRIPTIONAL REGULATOR	coord: 1..157

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CcUC02G029780	CcUC02G029780	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC02G029780.1-exon	CcUC02G029780.1-exon-CicolChr02:25062964..25063437	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC02G029780.1-cds	CcUC02G029780.1-cds-CicolChr02:25062964..25063437	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CcUC02G029780.1	CcUC02G029780.1-protein	polypeptide