CcUC02G028180.1 (mRNA) Watermelon (PI 537277) v1

Overview


Name	CcUC02G028180.1
Type	mRNA
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	ATP synthase subunit beta, chloroplastic
Location	CicolChr02: 21622930 .. 21623259 (+)
Sequence length	330
RNA-Seq Expression	CcUC02G028180.1
Synteny	CcUC02G028180.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTAATGAATAAGACATGCTTCTATTTATCGATAATATCTTCCGTTTCGTTCAAGCGGGATCTGAAGTATCAGCGTTACTGGGTAGAATGCCTTAGCCTTAGTATTGAAATGGGTTCCTTACAAGAAAGAATTACTTCTACCAAGGAAGGGTCCATAACTTCTATTCAAACTGTTTATGTACCTTTTGACGATTTAACCGATCCTGCTCCTGCCACCATATTTGCACATTTGGATGCTACTACCGTACTATCAAGAGGATTAGCTACCAAAGGTATCTATCCAACAGTAGATCCTTTAGATTCAAACTCAACTATGCTACAACCCTGA

mRNA sequence

ATGTTAATGAATAAGACATGCTTCTATTTATCGATAATATCTTCCGTTTCGTTCAAGCGGGATCTGAAGTATCAGCGTTACTGGGTAGAATGCCTTAGCCTTAGTATTGAAATGGGTTCCTTACAAGAAAGAATTACTTCTACCAAGGAAGGGTCCATAACTTCTATTCAAACTGTTTATGTACCTTTTGACGATTTAACCGATCCTGCTCCTGCCACCATATTTGCACATTTGGATGCTACTACCGTACTATCAAGAGGATTAGCTACCAAAGGTATCTATCCAACAGTAGATCCTTTAGATTCAAACTCAACTATGCTACAACCCTGA

Coding sequence (CDS)

ATGTTAATGAATAAGACATGCTTCTATTTATCGATAATATCTTCCGTTTCGTTCAAGCGGGATCTGAAGTATCAGCGTTACTGGGTAGAATGCCTTAGCCTTAGTATTGAAATGGGTTCCTTACAAGAAAGAATTACTTCTACCAAGGAAGGGTCCATAACTTCTATTCAAACTGTTTATGTACCTTTTGACGATTTAACCGATCCTGCTCCTGCCACCATATTTGCACATTTGGATGCTACTACCGTACTATCAAGAGGATTAGCTACCAAAGGTATCTATCCAACAGTAGATCCTTTAGATTCAAACTCAACTATGCTACAACCCTGA

Protein sequence

MLMNKTCFYLSIISSVSFKRDLKYQRYWVECLSLSIEMGSLQERITSTKEGSITSIQTVYVPFDDLTDPAPATIFAHLDATTVLSRGLATKGIYPTVDPLDSNSTMLQP

Homology

[Close]

BLAST of CcUC02G028180.1 vs. NCBI nr
Match: CAB4287509.1 (unnamed protein product [Prunus armeniaca])

HSP 1 Score: 147.1 bits (370), Expect = 8.7e-32
Identity = 77/99 (77.78%), Postives = 80/99 (80.81%), Query Frame = 0


Query: 18  FKRDLKYQRYWVEC-------LSLSIEMGSLQERITSTKEGSITSIQTVYVPFDDLTDPA 77
           F+ D KY  YWVEC        +LS EMG+LQERITSTKEGSITSIQ VYVP DDLTDPA
Sbjct: 170 FRDDPKYPLYWVECPPLWVINPTLSTEMGTLQERITSTKEGSITSIQAVYVPADDLTDPA 229

Query: 78  PATIFAHLDATTVLSRGLATKGIYPTVDPLDSNSTMLQP 110
           PAT FAHLDATTVLSRGLA KGIYP VDPLDS STMLQP
Sbjct: 230 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 268

[Close]

BLAST of CcUC02G028180.1 vs. NCBI nr
Match: TKY69249.1 (ATP synthase subunit beta [Spatholobus suberectus])

HSP 1 Score: 142.1 bits (357), Expect = 2.8e-30
Identity = 77/97 (79.38%), Postives = 80/97 (82.47%), Query Frame = 0


Query: 13  ISSVSFKRDLKYQRYWVECLSLSIEMGSLQERITSTKEGSITSIQTVYVPFDDLTDPAPA 72
           +SS S K+DLKY  YWVEC  L  EMGSLQERITSTKEGSITSIQ VYVP +DL DPAPA
Sbjct: 186 MSSDSSKQDLKYLPYWVEC-PLLTEMGSLQERITSTKEGSITSIQAVYVPANDLIDPAPA 245

Query: 73  TIFAHLDATTVLSRGLATKGIYPTVDPLDSNSTMLQP 110
           T FAHLD TTVLSRGL  KGIYP VDPLDS STMLQP
Sbjct: 246 TTFAHLD-TTVLSRGLVAKGIYPVVDPLDSTSTMLQP 280

[Close]

BLAST of CcUC02G028180.1 vs. NCBI nr
Match: VDD22437.1 (unnamed protein product [Brassica rapa])

HSP 1 Score: 141.4 bits (355), Expect = 4.8e-30
Identity = 81/116 (69.83%), Postives = 85/116 (73.28%), Query Frame = 0


Query: 1   MLMNKTCFYLSIISSVSFKRDLKYQRYWVECLS-------LSIEMGSLQERITSTKEGSI 60
           MLM+KT FYLS ISS   +   +         S       LS EMGSLQERITSTK+GSI
Sbjct: 1   MLMSKTYFYLSTISSFFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKKGSI 60

Query: 61  TSIQTVYVPFDDLTDPAPATIFAHLDATTVLSRGLATKGIYPTVDPLDSNSTMLQP 110
           TSIQ VYVP DDLTDPAPAT FAHLDATTVLSRGLA KGIYP VDPLDS STMLQP
Sbjct: 61  TSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 116

[Close]

BLAST of CcUC02G028180.1 vs. NCBI nr
Match: TXG60897.1 (hypothetical protein EZV62_012260 [Acer yangbiense])

HSP 1 Score: 138.7 bits (348), Expect = 3.1e-29
Identity = 71/78 (91.03%), Postives = 72/78 (92.31%), Query Frame = 0


Query: 32  LSLSIEMGSLQERITSTKEGSITSIQTVYVPFDDLTDPAPATIFAHLDATTVLSRGLATK 91
           L+LS EMGSLQERITSTKEGSITSIQ VYVP DDLTDP PAT FAHLDATTVLSRGLATK
Sbjct: 219 LTLSTEMGSLQERITSTKEGSITSIQAVYVPADDLTDPTPATTFAHLDATTVLSRGLATK 278

Query: 92  GIYPTVDPLDSNSTMLQP 110
           GIYPTVDPLDS STMLQP
Sbjct: 279 GIYPTVDPLDSMSTMLQP 296

[Close]

BLAST of CcUC02G028180.1 vs. NCBI nr
Match: ACF35672.1 (ATP synthase beta subunit, partial [Lasjia claudiensis])

HSP 1 Score: 137.9 bits (346), Expect = 5.3e-29
Identity = 70/77 (90.91%), Postives = 71/77 (92.21%), Query Frame = 0


Query: 33  SLSIEMGSLQERITSTKEGSITSIQTVYVPFDDLTDPAPATIFAHLDATTVLSRGLATKG 92
           +LS EMGSLQERITSTKEGSITSIQ VYVP DDLTDPAPAT FAHLDATTVLSRGLATKG
Sbjct: 301 TLSTEMGSLQERITSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLATKG 360

Query: 93  IYPTVDPLDSNSTMLQP 110
           IYP VDPLDS STMLQP
Sbjct: 361 IYPAVDPLDSTSTMLQP 377

[Close]

BLAST of CcUC02G028180.1 vs. ExPASy Swiss-Prot
Match: Q3V527 (ATP synthase subunit beta, chloroplastic OS=Acorus calamus OX=4465 GN=atpB PE=3 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 2.6e-31
Identity = 69/77 (89.61%), Postives = 70/77 (90.91%), Query Frame = 0


Query: 33  SLSIEMGSLQERITSTKEGSITSIQTVYVPFDDLTDPAPATIFAHLDATTVLSRGLATKG 92
           +LS EMGSLQERITSTKEGSITSIQ VYVP DDLTDPAPAT FAHLDATTVLSRGLA KG
Sbjct: 301 TLSTEMGSLQERITSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKG 360

Query: 93  IYPTVDPLDSNSTMLQP 110
           IYP VDPLDS STMLQP
Sbjct: 361 IYPAVDPLDSTSTMLQP 377

[Close]

BLAST of CcUC02G028180.1 vs. ExPASy Swiss-Prot
Match: Q70XZ6 (ATP synthase subunit beta, chloroplastic OS=Amborella trichopoda OX=13333 GN=atpB PE=3 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 2.6e-31
Identity = 69/77 (89.61%), Postives = 70/77 (90.91%), Query Frame = 0


Query: 33  SLSIEMGSLQERITSTKEGSITSIQTVYVPFDDLTDPAPATIFAHLDATTVLSRGLATKG 92
           +LS EMGSLQERITSTKEGSITSIQ VYVP DDLTDPAPAT FAHLDATTVLSRGLA KG
Sbjct: 303 TLSTEMGSLQERITSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKG 362

Query: 93  IYPTVDPLDSNSTMLQP 110
           IYP VDPLDS STMLQP
Sbjct: 363 IYPAVDPLDSTSTMLQP 379

[Close]

BLAST of CcUC02G028180.1 vs. ExPASy Swiss-Prot
Match: Q31794 (ATP synthase subunit beta, chloroplastic OS=Anthoceros angustus OX=48387 GN=atpB PE=2 SV=2)

HSP 1 Score: 136.0 bits (341), Expect = 2.6e-31
Identity = 69/77 (89.61%), Postives = 70/77 (90.91%), Query Frame = 0


Query: 33  SLSIEMGSLQERITSTKEGSITSIQTVYVPFDDLTDPAPATIFAHLDATTVLSRGLATKG 92
           +LS EMGSLQERITSTKEGSITSIQ VYVP DDLTDPAPAT FAHLDATTVLSRGLA KG
Sbjct: 299 TLSTEMGSLQERITSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKG 358

Query: 93  IYPTVDPLDSNSTMLQP 110
           IYP VDPLDS STMLQP
Sbjct: 359 IYPAVDPLDSTSTMLQP 375

[Close]

BLAST of CcUC02G028180.1 vs. ExPASy Swiss-Prot
Match: Q9MRV8 (ATP synthase subunit beta, chloroplastic OS=Aristolochia macrophylla OX=12949 GN=atpB PE=3 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 2.6e-31
Identity = 69/77 (89.61%), Postives = 70/77 (90.91%), Query Frame = 0


Query: 33  SLSIEMGSLQERITSTKEGSITSIQTVYVPFDDLTDPAPATIFAHLDATTVLSRGLATKG 92
           +LS EMGSLQERITSTKEGSITSIQ VYVP DDLTDPAPAT FAHLDATTVLSRGLA KG
Sbjct: 301 TLSTEMGSLQERITSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKG 360

Query: 93  IYPTVDPLDSNSTMLQP 110
           IYP VDPLDS STMLQP
Sbjct: 361 IYPAVDPLDSTSTMLQP 377

[Close]

BLAST of CcUC02G028180.1 vs. ExPASy Swiss-Prot
Match: Q95AF8 (ATP synthase subunit beta, chloroplastic OS=Aspidistra elatior OX=39526 GN=atpB PE=3 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 2.6e-31
Identity = 69/77 (89.61%), Postives = 70/77 (90.91%), Query Frame = 0


Query: 33  SLSIEMGSLQERITSTKEGSITSIQTVYVPFDDLTDPAPATIFAHLDATTVLSRGLATKG 92
           +LS EMGSLQERITSTKEGSITSIQ VYVP DDLTDPAPAT FAHLDATTVLSRGLA KG
Sbjct: 301 TLSTEMGSLQERITSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKG 360

Query: 93  IYPTVDPLDSNSTMLQP 110
           IYP VDPLDS STMLQP
Sbjct: 361 IYPAVDPLDSTSTMLQP 377

[Close]

BLAST of CcUC02G028180.1 vs. ExPASy TrEMBL
Match: A0A6J5VEN7 (H(+)-transporting two-sector ATPase OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS45470 PE=3 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 4.2e-32
Identity = 77/99 (77.78%), Postives = 80/99 (80.81%), Query Frame = 0


Query: 18  FKRDLKYQRYWVEC-------LSLSIEMGSLQERITSTKEGSITSIQTVYVPFDDLTDPA 77
           F+ D KY  YWVEC        +LS EMG+LQERITSTKEGSITSIQ VYVP DDLTDPA
Sbjct: 170 FRDDPKYPLYWVECPPLWVINPTLSTEMGTLQERITSTKEGSITSIQAVYVPADDLTDPA 229

Query: 78  PATIFAHLDATTVLSRGLATKGIYPTVDPLDSNSTMLQP 110
           PAT FAHLDATTVLSRGLA KGIYP VDPLDS STMLQP
Sbjct: 230 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 268

[Close]

BLAST of CcUC02G028180.1 vs. ExPASy TrEMBL
Match: A0A3P6CUH0 (H(+)-transporting two-sector ATPase OS=Brassica campestris OX=3711 GN=BRASC25T45871Z PE=3 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 2.3e-30
Identity = 81/116 (69.83%), Postives = 85/116 (73.28%), Query Frame = 0


Query: 1   MLMNKTCFYLSIISSVSFKRDLKYQRYWVECLS-------LSIEMGSLQERITSTKEGSI 60
           MLM+KT FYLS ISS   +   +         S       LS EMGSLQERITSTK+GSI
Sbjct: 1   MLMSKTYFYLSTISSFFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKKGSI 60

Query: 61  TSIQTVYVPFDDLTDPAPATIFAHLDATTVLSRGLATKGIYPTVDPLDSNSTMLQP 110
           TSIQ VYVP DDLTDPAPAT FAHLDATTVLSRGLA KGIYP VDPLDS STMLQP
Sbjct: 61  TSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 116

[Close]

BLAST of CcUC02G028180.1 vs. ExPASy TrEMBL
Match: A0A2N9GZW1 (H(+)-transporting two-sector ATPase OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS35679 PE=3 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 3.9e-30
Identity = 79/118 (66.95%), Postives = 87/118 (73.73%), Query Frame = 0


Query: 3   MNKTCFYLSIISSVSFKR--DLKYQRYWVECL--------SLSIEMGSL-QERITSTKEG 62
           + KT   + +I++++     D KY  YWVECL         LS EMG   QERITSTKEG
Sbjct: 137 VGKTVLIMELINNIAKAHGGDPKYLPYWVECLLLWGYINRPLSTEMGFFTQERITSTKEG 196

Query: 63  SITSIQTVYVPFDDLTDPAPATIFAHLDATTVLSRGLATKGIYPTVDPLDSNSTMLQP 110
           SITSIQ VYVP DDLTDPAPAT FAHLDATTVLSRGLA+KGIYP VDPLDS STMLQP
Sbjct: 197 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQP 254

[Close]

BLAST of CcUC02G028180.1 vs. ExPASy TrEMBL
Match: A0A5C7HUX7 (H(+)-transporting two-sector ATPase OS=Acer yangbiense OX=1000413 GN=EZV62_012260 PE=3 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 1.5e-29
Identity = 71/78 (91.03%), Postives = 72/78 (92.31%), Query Frame = 0


Query: 32  LSLSIEMGSLQERITSTKEGSITSIQTVYVPFDDLTDPAPATIFAHLDATTVLSRGLATK 91
           L+LS EMGSLQERITSTKEGSITSIQ VYVP DDLTDP PAT FAHLDATTVLSRGLATK
Sbjct: 219 LTLSTEMGSLQERITSTKEGSITSIQAVYVPADDLTDPTPATTFAHLDATTVLSRGLATK 278

Query: 92  GIYPTVDPLDSNSTMLQP 110
           GIYPTVDPLDS STMLQP
Sbjct: 279 GIYPTVDPLDSMSTMLQP 296

[Close]

BLAST of CcUC02G028180.1 vs. ExPASy TrEMBL
Match: B4YQ48 (ATP synthase subunit beta (Fragment) OS=Lasjia claudiensis OX=406997 GN=atpB PE=3 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 2.5e-29
Identity = 70/77 (90.91%), Postives = 71/77 (92.21%), Query Frame = 0


Query: 33  SLSIEMGSLQERITSTKEGSITSIQTVYVPFDDLTDPAPATIFAHLDATTVLSRGLATKG 92
           +LS EMGSLQERITSTKEGSITSIQ VYVP DDLTDPAPAT FAHLDATTVLSRGLATKG
Sbjct: 301 TLSTEMGSLQERITSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLATKG 360

Query: 93  IYPTVDPLDSNSTMLQP 110
           IYP VDPLDS STMLQP
Sbjct: 361 IYPAVDPLDSTSTMLQP 377

[Close]

BLAST of CcUC02G028180.1 vs. TAIR 10
Match: ATCG00480.1 (ATP synthase subunit beta )

HSP 1 Score: 133.3 bits (334), Expect = 1.2e-31
Identity = 67/77 (87.01%), Postives = 70/77 (90.91%), Query Frame = 0


Query: 33  SLSIEMGSLQERITSTKEGSITSIQTVYVPFDDLTDPAPATIFAHLDATTVLSRGLATKG 92
           +LS EMG+LQERITSTK+GSITSIQ VYVP DDLTDPAPAT FAHLDATTVLSRGLA KG
Sbjct: 301 TLSTEMGTLQERITSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKG 360

Query: 93  IYPTVDPLDSNSTMLQP 110
           IYP VDPLDS STMLQP
Sbjct: 361 IYPAVDPLDSTSTMLQP 377

[Close]

BLAST of CcUC02G028180.1 vs. TAIR 10
Match: AT5G08670.1 (ATP synthase alpha/beta family protein )

HSP 1 Score: 115.2 bits (287), Expect = 3.4e-26
Identity = 55/77 (71.43%), Postives = 66/77 (85.71%), Query Frame = 0


Query: 33  SLSIEMGSLQERITSTKEGSITSIQTVYVPFDDLTDPAPATIFAHLDATTVLSRGLATKG 92
           +L+ ++G+LQERIT+TK+GSITS+Q +YVP DDLTDPAPAT FAHLDATTVLSR ++  G
Sbjct: 361 TLASDLGALQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRQISELG 420

Query: 93  IYPTVDPLDSNSTMLQP 110
           IYP VDPLDS S ML P
Sbjct: 421 IYPAVDPLDSTSRMLSP 437

[Close]

BLAST of CcUC02G028180.1 vs. TAIR 10
Match: AT5G08680.1 (ATP synthase alpha/beta family protein )

HSP 1 Score: 115.2 bits (287), Expect = 3.4e-26
Identity = 55/77 (71.43%), Postives = 66/77 (85.71%), Query Frame = 0


Query: 33  SLSIEMGSLQERITSTKEGSITSIQTVYVPFDDLTDPAPATIFAHLDATTVLSRGLATKG 92
           +L+ ++G+LQERIT+TK+GSITS+Q +YVP DDLTDPAPAT FAHLDATTVLSR ++  G
Sbjct: 364 TLASDLGALQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRQISELG 423

Query: 93  IYPTVDPLDSNSTMLQP 110
           IYP VDPLDS S ML P
Sbjct: 424 IYPAVDPLDSTSRMLSP 440

[Close]

BLAST of CcUC02G028180.1 vs. TAIR 10
Match: AT5G08690.1 (ATP synthase alpha/beta family protein )

HSP 1 Score: 115.2 bits (287), Expect = 3.4e-26
Identity = 55/77 (71.43%), Postives = 66/77 (85.71%), Query Frame = 0


Query: 33  SLSIEMGSLQERITSTKEGSITSIQTVYVPFDDLTDPAPATIFAHLDATTVLSRGLATKG 92
           +L+ ++G+LQERIT+TK+GSITS+Q +YVP DDLTDPAPAT FAHLDATTVLSR ++  G
Sbjct: 361 TLASDLGALQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRQISELG 420

Query: 93  IYPTVDPLDSNSTMLQP 110
           IYP VDPLDS S ML P
Sbjct: 421 IYPAVDPLDSTSRMLSP 437

The following BLAST results are available for this feature:

BLAST of CcUC02G028180.1 vs. NCBI nr


Match Name	E-value	Identity	Description
CAB4287509.1	8.7e-32	77.78	unnamed protein product [Prunus armeniaca]	[more]
TKY69249.1	2.8e-30	79.38	ATP synthase subunit beta [Spatholobus suberectus]	[more]
VDD22437.1	4.8e-30	69.83	unnamed protein product [Brassica rapa]	[more]
TXG60897.1	3.1e-29	91.03	hypothetical protein EZV62_012260 [Acer yangbiense]	[more]
ACF35672.1	5.3e-29	90.91	ATP synthase beta subunit, partial [Lasjia claudiensis]	[more]

BLAST of CcUC02G028180.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q3V527	2.6e-31	89.61	ATP synthase subunit beta, chloroplastic OS=Acorus calamus OX=4465 GN=atpB PE=3 ...	[more]
Q70XZ6	2.6e-31	89.61	ATP synthase subunit beta, chloroplastic OS=Amborella trichopoda OX=13333 GN=atp...	[more]
Q31794	2.6e-31	89.61	ATP synthase subunit beta, chloroplastic OS=Anthoceros angustus OX=48387 GN=atpB...	[more]
Q9MRV8	2.6e-31	89.61	ATP synthase subunit beta, chloroplastic OS=Aristolochia macrophylla OX=12949 GN...	[more]
Q95AF8	2.6e-31	89.61	ATP synthase subunit beta, chloroplastic OS=Aspidistra elatior OX=39526 GN=atpB ...	[more]

BLAST of CcUC02G028180.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J5VEN7	4.2e-32	77.78	H(+)-transporting two-sector ATPase OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS...	[more]
A0A3P6CUH0	2.3e-30	69.83	H(+)-transporting two-sector ATPase OS=Brassica campestris OX=3711 GN=BRASC25T45...	[more]
A0A2N9GZW1	3.9e-30	66.95	H(+)-transporting two-sector ATPase OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS3567...	[more]
A0A5C7HUX7	1.5e-29	91.03	H(+)-transporting two-sector ATPase OS=Acer yangbiense OX=1000413 GN=EZV62_01226...	[more]
B4YQ48	2.5e-29	90.91	ATP synthase subunit beta (Fragment) OS=Lasjia claudiensis OX=406997 GN=atpB PE=...	[more]

BLAST of CcUC02G028180.1 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00480.1	1.2e-31	87.01	ATP synthase subunit beta	[more]
AT5G08670.1	3.4e-26	71.43	ATP synthase alpha/beta family protein	[more]
AT5G08680.1	3.4e-26	71.43	ATP synthase alpha/beta family protein	[more]
AT5G08690.1	3.4e-26	71.43	ATP synthase alpha/beta family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.12240		coord: 33..109 e-value: 8.5E-28 score: 99.1
None	No IPR available	PANTHER	PTHR15184	ATP SYNTHASE	coord: 33..109
None	No IPR available	PANTHER	PTHR15184:SF65	F0F1-TYPE ATP SYNTHASE, BETA SUBUNIT	coord: 33..109
IPR000194	ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain	PFAM	PF00006	ATP-synt_ab	coord: 34..104 e-value: 2.6E-15 score: 56.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 34..108

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CcUC02G028180	CcUC02G028180	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC02G028180.1-exon	CcUC02G028180.1-exon-CicolChr02:21622930..21623259	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC02G028180.1-cds	CcUC02G028180.1-cds-CicolChr02:21622930..21623259	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CcUC02G028180.1	CcUC02G028180.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042776	mitochondrial ATP synthesis coupled proton transport
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0005753	mitochondrial proton-transporting ATP synthase complex
cellular_component	GO:0045261	proton-transporting ATP synthase complex, catalytic core F(1)
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0046961	proton-transporting ATPase activity, rotational mechanism
molecular_function	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism