CcUC02G025890.1 (mRNA) Watermelon (PI 537277) v1

Overview


Name	CcUC02G025890.1
Type	mRNA
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	B box-type domain-containing protein
Location	CicolChr02: 11055616 .. 11056627 (+)
Sequence length	423
RNA-Seq Expression	CcUC02G025890.1
Synteny	CcUC02G025890.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGTAGAGGTGTAGAAGAGGGAAACCACGGTCACGGTGTTTGCCAGCGGTCTCCGGTGGCTGAGAAGGGCGGTGTTTCGGTGGCGGACGCAGTGATGTGCGAGCTCTGCAGCTCAAAGGCTTCATTGTACTGCCAAGCAGATGATGCATATTTATGTAGGAAATGTGACAAATGGGTTCATGGTGCCAATTTCTTAGCCCTCAGGCATATTAGGTGCATTCTCTGTAATGTTTGCCAAAACCTTACACAAAAATATCTCATGGGAACTTCAACTGAGATTCTTCTCCCTACCATCATCACTTGCACCAAAGCTAATGACTGTAACAATGGCAATCTTAACACATGTTGTTCAGTAATGCTCAAAAGGCCTTTTCTCTTTTTGTGAATCTTAAATTCTTAAAGATGTTTTCATCATCTCTTTGTCTTCCAATCTTTCTTTCTTTCTTTCTTTCATCTTGAATTTACAGTCTGCAAACTAGAAAGAAACAGGGGTGAAATTCTTGTTTGCTTGTTTGTTGCTGCAACCCCAATCTACTGATTTATAACTTTGGTTATTTTCTGTATGTTTTATAATAGTGGGTGCAAGAGAAATCTCTTTAAATTAGATTAGAGAAGAAAGATTTTAGAAACAGACACGAAAAACGAAATCGCTATCAAAGGCTGTTTGTCAGTGTTTGGAGGAAAATTTCTCTGGCTGTTGTTTTCTGAGCAAAAGATGCAAAAATTAGTAGCTGAGAAAAGGAGACTGGAGTTTATATTAATATGCTCAAAATTGTTTTTATTATACTCTCAGAGACTATCAACTCTGCCAAAAGTGACCAAAACAGATTACGTGGGAGTGAAAGAAATTAAGAATAATCTTATTTATGCAGCTCTGCCTAATAACCGATTAATTGCGTGGGTGCAAAGGCAAGAGGCTAAATGATGTACTAATGTTGTCCCTTGGATATCTTTATCACTTGTTTCCTCCTAAACTGGAAAATATTTCACCATTGCTGCAGTGGAAATGA

mRNA sequence

ATGTGTAGAGGTGTAGAAGAGGGAAACCACGGTCACGGTGTTTGCCAGCGGTCTCCGGTGGCTGAGAAGGGCGGTGTTTCGGTGGCGGACGCAGTGATGTGCGAGCTCTGCAGCTCAAAGGCTTCATTGTACTGCCAAGCAGATGATGCATATTTATGTAGGAAATGTGACAAATGGGTTCATGGTGCCAATTTCTTAGCCCTCAGGCATATTAGGTGCATTCTCTGTAATGTTTGCCAAAACCTTACACAAAAATATCTCATGGGAACTTCAACTGAGATTCTTCTCCCTACCATCATCACTTGCACCAAAGCTAATGACTGCAAGAGGCTAAATGATGTACTAATGTTGTCCCTTGGATATCTTTATCACTTGTTTCCTCCTAAACTGGAAAATATTTCACCATTGCTGCAGTGGAAATGA

Coding sequence (CDS)

ATGTGTAGAGGTGTAGAAGAGGGAAACCACGGTCACGGTGTTTGCCAGCGGTCTCCGGTGGCTGAGAAGGGCGGTGTTTCGGTGGCGGACGCAGTGATGTGCGAGCTCTGCAGCTCAAAGGCTTCATTGTACTGCCAAGCAGATGATGCATATTTATGTAGGAAATGTGACAAATGGGTTCATGGTGCCAATTTCTTAGCCCTCAGGCATATTAGGTGCATTCTCTGTAATGTTTGCCAAAACCTTACACAAAAATATCTCATGGGAACTTCAACTGAGATTCTTCTCCCTACCATCATCACTTGCACCAAAGCTAATGACTGCAAGAGGCTAAATGATGTACTAATGTTGTCCCTTGGATATCTTTATCACTTGTTTCCTCCTAAACTGGAAAATATTTCACCATTGCTGCAGTGGAAATGA

Protein sequence

MCRGVEEGNHGHGVCQRSPVAEKGGVSVADAVMCELCSSKASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTQKYLMGTSTEILLPTIITCTKANDCKRLNDVLMLSLGYLYHLFPPKLENISPLLQWK

Homology

[Close]

BLAST of CcUC02G025890.1 vs. NCBI nr
Match: KAA0042428.1 (Zinc finger protein CONSTANS-LIKE 14 [Cucumis melo var. makuwa])

HSP 1 Score: 200.3 bits (508), Expect = 1.1e-47
Identity = 94/118 (79.66%), Postives = 101/118 (85.59%), Query Frame = 0


Query: 1   MCRGVEEGNHGH----------GVCQRSPVAEKGGVSVADAVMCELCSSKASLYCQADDA 60
           MCRGVEEGNHGH          G C++SPV +KG VS A  +MCELC+SKASLYCQADDA
Sbjct: 1   MCRGVEEGNHGHRHGHSHGHGRGGCRQSPVIQKGDVSAAGVLMCELCNSKASLYCQADDA 60

Query: 61  YLCRKCDKWVHGANFLALRHIRCILCNVCQNLTQKYLMGTSTEILLPTIITCTKANDC 109
           YLCRKCDKWVHGANFLALRHIRCILC+VCQNLTQKYLMGTSTE+LLPTII CTKANDC
Sbjct: 61  YLCRKCDKWVHGANFLALRHIRCILCDVCQNLTQKYLMGTSTEVLLPTIIACTKANDC 118

[Close]

BLAST of CcUC02G025890.1 vs. NCBI nr
Match: TYK13446.1 (Zinc finger protein CONSTANS-LIKE 14 [Cucumis melo var. makuwa])

HSP 1 Score: 200.3 bits (508), Expect = 1.1e-47
Identity = 94/118 (79.66%), Postives = 101/118 (85.59%), Query Frame = 0


Query: 1   MCRGVEEGNHGH----------GVCQRSPVAEKGGVSVADAVMCELCSSKASLYCQADDA 60
           MCRGVEEGNHGH          G C++SPV +KG VS A  +MCELC+SKASLYCQADDA
Sbjct: 1   MCRGVEEGNHGHGHGHSHGHGRGGCRQSPVIQKGDVSAAGVLMCELCNSKASLYCQADDA 60

Query: 61  YLCRKCDKWVHGANFLALRHIRCILCNVCQNLTQKYLMGTSTEILLPTIITCTKANDC 109
           YLCRKCDKWVHGANFLALRHIRCILC+VCQNLTQKYLMGTSTE+LLPTII CTKANDC
Sbjct: 61  YLCRKCDKWVHGANFLALRHIRCILCDVCQNLTQKYLMGTSTEVLLPTIIACTKANDC 118

[Close]

BLAST of CcUC02G025890.1 vs. NCBI nr
Match: KGN63276.1 (hypothetical protein Csa_022167 [Cucumis sativus])

HSP 1 Score: 199.1 bits (505), Expect = 2.5e-47
Identity = 93/112 (83.04%), Postives = 99/112 (88.39%), Query Frame = 0


Query: 1   MCRGVEEGNHGHG----VCQRSPVAEKGGVSVADAVMCELCSSKASLYCQADDAYLCRKC 60
           MCRGVEEGNHGH      C++SPV +KG VS A  VMCELC+SKASLYCQADDAYLCRKC
Sbjct: 1   MCRGVEEGNHGHAHGRDGCRQSPVIQKGVVSAAGVVMCELCNSKASLYCQADDAYLCRKC 60

Query: 61  DKWVHGANFLALRHIRCILCNVCQNLTQKYLMGTSTEILLPTIITCTKANDC 109
           DKWVHGANFLALRHIRCILCNVCQNLTQKYLMGTSTE+LLPTII C +ANDC
Sbjct: 61  DKWVHGANFLALRHIRCILCNVCQNLTQKYLMGTSTEVLLPTIIACAEANDC 112

[Close]

BLAST of CcUC02G025890.1 vs. NCBI nr
Match: KAG6570870.1 (B-box domain protein 31, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010718.1 B-box domain protein 31, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 172.2 bits (435), Expect = 3.2e-39
Identity = 84/110 (76.36%), Postives = 90/110 (81.82%), Query Frame = 0


Query: 1   MCRGVEEGNHGHGVCQRSPVAEKGGVSVADA-VMCELCSSKASLYCQADDAYLCRKCDKW 60
           MCRGV E    HG C+    AEKGG S   A VMCELC S+ASLYCQADDAYLCRKCDKW
Sbjct: 1   MCRGVVE-QRSHGGCREFSAAEKGGDSAEGAVVMCELCDSRASLYCQADDAYLCRKCDKW 60

Query: 61  VHGANFLALRHIRCILCNVCQNLTQKYLMGTSTEILLPTIITCTK-ANDC 109
           VHGANFLALRHIRCILCNVCQNLT KYLMGTST++LLPTI+TC +  NDC
Sbjct: 61  VHGANFLALRHIRCILCNVCQNLTHKYLMGTSTQVLLPTIVTCNQPPNDC 109

[Close]

BLAST of CcUC02G025890.1 vs. NCBI nr
Match: XP_023512381.1 (B-box domain protein 31-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 169.9 bits (429), Expect = 1.6e-38
Identity = 83/110 (75.45%), Postives = 89/110 (80.91%), Query Frame = 0


Query: 1   MCRGVEEGNHGHGVCQRSPVAEKGGVSVADAV-MCELCSSKASLYCQADDAYLCRKCDKW 60
           MCRGV E    HG C+    AEKGG S   AV MCELC S+ASLYCQADDAYLCRKCDKW
Sbjct: 51  MCRGVVE-QRSHGGCREFSAAEKGGDSAEGAVLMCELCDSRASLYCQADDAYLCRKCDKW 110

Query: 61  VHGANFLALRHIRCILCNVCQNLTQKYLMGTSTEILLPTIITCTK-ANDC 109
           VHGANFLALRHIRCILCNVCQ LT KYLMGTST++LLPTI+TC +  NDC
Sbjct: 111 VHGANFLALRHIRCILCNVCQKLTHKYLMGTSTQVLLPTIVTCNQPPNDC 159

[Close]

BLAST of CcUC02G025890.1 vs. ExPASy Swiss-Prot
Match: Q1G3I2 (B-box domain protein 30 OS=Arabidopsis thaliana OX=3702 GN=MIP1A PE=1 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.3e-19
Identity = 49/103 (47.57%), Postives = 66/103 (64.08%), Query Frame = 0


Query: 1   MCRGV---EEGNHGHGVCQR-SPVAEKGGVSVADAVMCELCSSKASLYCQADDAYLCRKC 60
           MCRG    EE    +G CQR    + K  VS      CELC   A++YC+AD A+LCRKC
Sbjct: 1   MCRGFEKEEERRSDNGGCQRLCTESHKAPVS------CELCGENATVYCEADAAFLCRKC 60

Query: 61  DKWVHGANFLALRHIRCILCNVCQNLTQKYLMGTSTEILLPTI 100
           D+WVH ANFLA RH+R ++C  C+ LT++ L+G +  ++LP I
Sbjct: 61  DRWVHSANFLARRHLRRVICTTCRKLTRRCLVGDNFNVVLPEI 97

[Close]

BLAST of CcUC02G025890.1 vs. ExPASy Swiss-Prot
Match: Q9LRM4 (B-box domain protein 31 OS=Arabidopsis thaliana OX=3702 GN=MIP1B PE=2 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 6.6e-19
Identity = 50/109 (45.87%), Postives = 66/109 (60.55%), Query Frame = 0


Query: 1   MCRGV--EEGNHGHG-----VCQRSPVAEKGGVSVADAVMCELCSSKASLYCQADDAYLC 60
           MCRG+  EE     G     +C R  V           V CELC   AS++C+AD A+LC
Sbjct: 1   MCRGLNNEESRRSDGGGCRSLCTRPSV----------PVRCELCDGDASVFCEADSAFLC 60

Query: 61  RKCDKWVHGANFLALRHIRCILCNVCQNLTQKYLMGT-STEILLPTIIT 102
           RKCD+WVHGANFLA RH+R +LC  CQ LT++ L+G     ++LP++ T
Sbjct: 61  RKCDRWVHGANFLAWRHVRRVLCTSCQKLTRRCLVGDHDFHVVLPSVTT 99

[Close]

BLAST of CcUC02G025890.1 vs. ExPASy Swiss-Prot
Match: Q9LJB7 (B-box zinc finger protein 32 OS=Arabidopsis thaliana OX=3702 GN=BBX32 PE=1 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 2.3e-11
Identity = 28/56 (50.00%), Postives = 39/56 (69.64%), Query Frame = 0


Query: 34 CELCSSKASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTQKYLMG 90
          CELC ++A L+C AD A+LCR CD   H +NFL  RH R ++C  C++LTQ ++ G
Sbjct: 5  CELCGAEADLHCAADSAFLCRSCDAKFHASNFLFARHFRRVICPNCKSLTQNFVSG 60

[Close]

BLAST of CcUC02G025890.1 vs. ExPASy Swiss-Prot
Match: Q940T9 (Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=COL4 PE=2 SV=2)

HSP 1 Score: 55.5 bits (132), Expect = 5.8e-07
Identity = 25/49 (51.02%), Postives = 33/49 (67.35%), Query Frame = 0


Query: 33 MCELC-SSKASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQ 81
          +C+ C S+ A+LYC+ D A+LC  CD  VH AN LA RH R  +C VC+
Sbjct: 5  LCDSCKSATAALYCRPDAAFLCLSCDSKVHAANKLASRHARVWMCEVCE 53

[Close]

BLAST of CcUC02G025890.1 vs. ExPASy Swiss-Prot
Match: Q9C9F4 (Putative zinc finger protein At1g68190 OS=Arabidopsis thaliana OX=3702 GN=At1g68190 PE=2 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 7.5e-07
Identity = 25/50 (50.00%), Postives = 34/50 (68.00%), Query Frame = 0


Query: 33 MCELCSS-KASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQN 82
          +CE C + +A +YC AD A LC  CD  VH AN L+ RH+R +LC+ C+N
Sbjct: 13 VCEFCKAYRAVVYCIADTANLCLTCDAKVHSANSLSGRHLRTVLCDSCKN 62

[Close]

BLAST of CcUC02G025890.1 vs. ExPASy TrEMBL
Match: A0A5D3CSP7 (Zinc finger protein CONSTANS-LIKE 14 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold61715G00010 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 5.4e-48
Identity = 94/118 (79.66%), Postives = 101/118 (85.59%), Query Frame = 0


Query: 1   MCRGVEEGNHGH----------GVCQRSPVAEKGGVSVADAVMCELCSSKASLYCQADDA 60
           MCRGVEEGNHGH          G C++SPV +KG VS A  +MCELC+SKASLYCQADDA
Sbjct: 1   MCRGVEEGNHGHGHGHSHGHGRGGCRQSPVIQKGDVSAAGVLMCELCNSKASLYCQADDA 60

Query: 61  YLCRKCDKWVHGANFLALRHIRCILCNVCQNLTQKYLMGTSTEILLPTIITCTKANDC 109
           YLCRKCDKWVHGANFLALRHIRCILC+VCQNLTQKYLMGTSTE+LLPTII CTKANDC
Sbjct: 61  YLCRKCDKWVHGANFLALRHIRCILCDVCQNLTQKYLMGTSTEVLLPTIIACTKANDC 118

[Close]

BLAST of CcUC02G025890.1 vs. ExPASy TrEMBL
Match: A0A5A7TI11 (Zinc finger protein CONSTANS-LIKE 14 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold266G00060 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 5.4e-48
Identity = 94/118 (79.66%), Postives = 101/118 (85.59%), Query Frame = 0


Query: 1   MCRGVEEGNHGH----------GVCQRSPVAEKGGVSVADAVMCELCSSKASLYCQADDA 60
           MCRGVEEGNHGH          G C++SPV +KG VS A  +MCELC+SKASLYCQADDA
Sbjct: 1   MCRGVEEGNHGHRHGHSHGHGRGGCRQSPVIQKGDVSAAGVLMCELCNSKASLYCQADDA 60

Query: 61  YLCRKCDKWVHGANFLALRHIRCILCNVCQNLTQKYLMGTSTEILLPTIITCTKANDC 109
           YLCRKCDKWVHGANFLALRHIRCILC+VCQNLTQKYLMGTSTE+LLPTII CTKANDC
Sbjct: 61  YLCRKCDKWVHGANFLALRHIRCILCDVCQNLTQKYLMGTSTEVLLPTIIACTKANDC 118

[Close]

BLAST of CcUC02G025890.1 vs. ExPASy TrEMBL
Match: A0A0A0LTB0 (B box-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G423560 PE=4 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 1.2e-47
Identity = 93/112 (83.04%), Postives = 99/112 (88.39%), Query Frame = 0


Query: 1   MCRGVEEGNHGHG----VCQRSPVAEKGGVSVADAVMCELCSSKASLYCQADDAYLCRKC 60
           MCRGVEEGNHGH      C++SPV +KG VS A  VMCELC+SKASLYCQADDAYLCRKC
Sbjct: 1   MCRGVEEGNHGHAHGRDGCRQSPVIQKGVVSAAGVVMCELCNSKASLYCQADDAYLCRKC 60

Query: 61  DKWVHGANFLALRHIRCILCNVCQNLTQKYLMGTSTEILLPTIITCTKANDC 109
           DKWVHGANFLALRHIRCILCNVCQNLTQKYLMGTSTE+LLPTII C +ANDC
Sbjct: 61  DKWVHGANFLALRHIRCILCNVCQNLTQKYLMGTSTEVLLPTIIACAEANDC 112

[Close]

BLAST of CcUC02G025890.1 vs. ExPASy TrEMBL
Match: A0A6J1JGF8 (B-box domain protein 30-like OS=Cucurbita maxima OX=3661 GN=LOC111484160 PE=4 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 1.0e-38
Identity = 83/110 (75.45%), Postives = 91/110 (82.73%), Query Frame = 0


Query: 1   MCRGVEEGNHGHGVCQRSPVAEKGGVSVADA-VMCELCSSKASLYCQADDAYLCRKCDKW 60
           MCRGV E    HG C+    AEKGG S   A VMCELC+S+ASLYCQADDAYLCRKCDKW
Sbjct: 34  MCRGVVE-QRSHGGCRDFSAAEKGGDSAEGAVVMCELCNSRASLYCQADDAYLCRKCDKW 93

Query: 61  VHGANFLALRHIRCILCNVCQNLTQKYLMGTSTEILLPTIITCTK-ANDC 109
           VHGANFLALRHIRCILC+VCQNLT KYLMGTST++LLPTI+TC +  NDC
Sbjct: 94  VHGANFLALRHIRCILCSVCQNLTHKYLMGTSTQVLLPTIVTCDQPPNDC 142

[Close]

BLAST of CcUC02G025890.1 vs. ExPASy TrEMBL
Match: A0A2C9UPR0 (B box-type domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_13G073800 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 1.7e-33
Identity = 76/131 (58.02%), Postives = 91/131 (69.47%), Query Frame = 0


Query: 1   MCRGVEEGNHGHG-VCQRSPVAEKG-GVSVADAVMCELCSSKASLYCQADDAYLCRKCDK 60
           MCRGVEE +H HG  C++    E G G   +  V CELC S+ASLYCQAD+A+LCRKCDK
Sbjct: 1   MCRGVEERSHSHGRFCRKQEEEEAGSGNETSSLVCCELCGSQASLYCQADNAFLCRKCDK 60

Query: 61  WVHGANFLALRHIRCILCNVCQNLTQKYLMGTSTEILLPTIIT-------CTKANDCKRL 120
           WVHGANFLA RHIRC LCN CQNLTQ+YL+G STEI+LPTI++       C   ND K  
Sbjct: 61  WVHGANFLAFRHIRCFLCNTCQNLTQRYLIGASTEIVLPTIVSLRERRQGCNTNNDDKLC 120

Query: 121 NDVLMLSLGYL 123
           +  L +   +L
Sbjct: 121 STSLKMPFLFL 131

[Close]

BLAST of CcUC02G025890.1 vs. TAIR 10
Match: AT4G15248.1 (B-box type zinc finger family protein )

HSP 1 Score: 97.4 bits (241), Expect = 9.4e-21
Identity = 49/103 (47.57%), Postives = 66/103 (64.08%), Query Frame = 0


Query: 1   MCRGV---EEGNHGHGVCQR-SPVAEKGGVSVADAVMCELCSSKASLYCQADDAYLCRKC 60
           MCRG    EE    +G CQR    + K  VS      CELC   A++YC+AD A+LCRKC
Sbjct: 1   MCRGFEKEEERRSDNGGCQRLCTESHKAPVS------CELCGENATVYCEADAAFLCRKC 60

Query: 61  DKWVHGANFLALRHIRCILCNVCQNLTQKYLMGTSTEILLPTI 100
           D+WVH ANFLA RH+R ++C  C+ LT++ L+G +  ++LP I
Sbjct: 61  DRWVHSANFLARRHLRRVICTTCRKLTRRCLVGDNFNVVLPEI 97

[Close]

BLAST of CcUC02G025890.1 vs. TAIR 10
Match: AT3G21890.1 (B-box type zinc finger family protein )

HSP 1 Score: 95.1 bits (235), Expect = 4.7e-20
Identity = 50/109 (45.87%), Postives = 66/109 (60.55%), Query Frame = 0


Query: 1   MCRGV--EEGNHGHG-----VCQRSPVAEKGGVSVADAVMCELCSSKASLYCQADDAYLC 60
           MCRG+  EE     G     +C R  V           V CELC   AS++C+AD A+LC
Sbjct: 1   MCRGLNNEESRRSDGGGCRSLCTRPSV----------PVRCELCDGDASVFCEADSAFLC 60

Query: 61  RKCDKWVHGANFLALRHIRCILCNVCQNLTQKYLMGT-STEILLPTIIT 102
           RKCD+WVHGANFLA RH+R +LC  CQ LT++ L+G     ++LP++ T
Sbjct: 61  RKCDRWVHGANFLAWRHVRRVLCTSCQKLTRRCLVGDHDFHVVLPSVTT 99

[Close]

BLAST of CcUC02G025890.1 vs. TAIR 10
Match: AT5G54470.1 (B-box type zinc finger family protein )

HSP 1 Score: 72.0 bits (175), Expect = 4.2e-13
Identity = 35/80 (43.75%), Postives = 47/80 (58.75%), Query Frame = 0


Query: 34  CELCSSKASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTQKYLMGTSTE 93
           CELC   A +YC++D A LC  CD  VHGANFL  +H+RC+LC+ CQ+ T     G +  
Sbjct: 6   CELCCGVARMYCESDQASLCWDCDGKVHGANFLVAKHMRCLLCSACQSHTPWKASGLN-- 65

Query: 94  ILLPTIITCTKANDCKRLND 114
            L PT+  C      K+ N+
Sbjct: 66  -LGPTVSICESCLARKKNNN 82

[Close]

BLAST of CcUC02G025890.1 vs. TAIR 10
Match: AT3G21150.1 (B-box 32 )

HSP 1 Score: 70.1 bits (170), Expect = 1.6e-12
Identity = 28/56 (50.00%), Postives = 39/56 (69.64%), Query Frame = 0


Query: 34 CELCSSKASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTQKYLMG 90
          CELC ++A L+C AD A+LCR CD   H +NFL  RH R ++C  C++LTQ ++ G
Sbjct: 5  CELCGAEADLHCAADSAFLCRSCDAKFHASNFLFARHFRRVICPNCKSLTQNFVSG 60

[Close]

BLAST of CcUC02G025890.1 vs. TAIR 10
Match: AT4G27310.1 (B-box type zinc finger family protein )

HSP 1 Score: 70.1 bits (170), Expect = 1.6e-12
Identity = 33/69 (47.83%), Postives = 42/69 (60.87%), Query Frame = 0


Query: 34  CELCSSKASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTQKYLMGTSTE 93
           C+LC+  A +YC++D A LC  CD  VHGANFL  +H RC+LC+ CQ+LT     G    
Sbjct: 5   CDLCNGVARMYCESDQASLCWDCDGKVHGANFLVAKHTRCLLCSACQSLTPWKATGLR-- 64

Query: 94  ILLPTIITC 103
            L PT   C
Sbjct: 65  -LGPTFSVC 70

The following BLAST results are available for this feature:

BLAST of CcUC02G025890.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0042428.1	1.1e-47	79.66	Zinc finger protein CONSTANS-LIKE 14 [Cucumis melo var. makuwa]	[more]
TYK13446.1	1.1e-47	79.66	Zinc finger protein CONSTANS-LIKE 14 [Cucumis melo var. makuwa]	[more]
KGN63276.1	2.5e-47	83.04	hypothetical protein Csa_022167 [Cucumis sativus]	[more]
KAG6570870.1	3.2e-39	76.36	B-box domain protein 31, partial [Cucurbita argyrosperma subsp. sororia] >KAG701...	[more]
XP_023512381.1	1.6e-38	75.45	B-box domain protein 31-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CcUC02G025890.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1G3I2	1.3e-19	47.57	B-box domain protein 30 OS=Arabidopsis thaliana OX=3702 GN=MIP1A PE=1 SV=1	[more]
Q9LRM4	6.6e-19	45.87	B-box domain protein 31 OS=Arabidopsis thaliana OX=3702 GN=MIP1B PE=2 SV=1	[more]
Q9LJB7	2.3e-11	50.00	B-box zinc finger protein 32 OS=Arabidopsis thaliana OX=3702 GN=BBX32 PE=1 SV=1	[more]
Q940T9	5.8e-07	51.02	Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=COL4 PE=2...	[more]
Q9C9F4	7.5e-07	50.00	Putative zinc finger protein At1g68190 OS=Arabidopsis thaliana OX=3702 GN=At1g68...	[more]

BLAST of CcUC02G025890.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CSP7	5.4e-48	79.66	Zinc finger protein CONSTANS-LIKE 14 OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A5A7TI11	5.4e-48	79.66	Zinc finger protein CONSTANS-LIKE 14 OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A0A0LTB0	1.2e-47	83.04	B box-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G423560 ...	[more]
A0A6J1JGF8	1.0e-38	75.45	B-box domain protein 30-like OS=Cucurbita maxima OX=3661 GN=LOC111484160 PE=4 SV...	[more]
A0A2C9UPR0	1.7e-33	58.02	B box-type domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_13G07...	[more]

BLAST of CcUC02G025890.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G15248.1	9.4e-21	47.57	B-box type zinc finger family protein	[more]
AT3G21890.1	4.7e-20	45.87	B-box type zinc finger family protein	[more]
AT5G54470.1	4.2e-13	43.75	B-box type zinc finger family protein	[more]
AT3G21150.1	1.6e-12	50.00	B-box 32	[more]
AT4G27310.1	1.6e-12	47.83	B-box type zinc finger family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000315	B-box-type zinc finger	SMART	SM00336	bboxneu5	coord: 29..75 e-value: 5.2E-8 score: 42.6
IPR000315	B-box-type zinc finger	PFAM	PF00643	zf-B_box	coord: 32..61 e-value: 1.7E-5 score: 24.9
IPR000315	B-box-type zinc finger	PROSITE	PS50119	ZF_BBOX	coord: 29..75 score: 8.915803
None	No IPR available	PANTHER	PTHR31717:SF100	B-BOX ZINC FINGER PROTEIN 29	coord: 17..107
None	No IPR available	PANTHER	PTHR31717	ZINC FINGER PROTEIN CONSTANS-LIKE 10	coord: 17..107
None	No IPR available	CDD	cd19821	Bbox1_BBX-like	coord: 34..73 e-value: 1.38128E-13 score: 58.8483

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CcUC02G025890	CcUC02G025890	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC02G025890.1-exon	CcUC02G025890.1-exon-CicolChr02:11055616..11055937	exon
CcUC02G025890.1-exon	CcUC02G025890.1-exon-CicolChr02:11056527..11056627	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC02G025890.1-cds	CcUC02G025890.1-cds-CicolChr02:11055616..11055937	CDS
CcUC02G025890.1-cds	CcUC02G025890.1-cds-CicolChr02:11056527..11056627	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CcUC02G025890.1	CcUC02G025890.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008270	zinc ion binding