CcUC02G021990.1 (mRNA) Watermelon (PI 537277) v1

Overview


Name	CcUC02G021990.1
Type	mRNA
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	auxin-induced protein 15A-like
Location	CicolChr02: 4379198 .. 4379497 (+)
Sequence length	300
RNA-Seq Expression	CcUC02G021990.1
Synteny	CcUC02G021990.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTTCCGTCTACCTAGAATTGTTACTGCTAAGCAAAGTCTTCAGCGATCTTCATCAACAGGGAACGGAGCATCTCCAAAGGCTGTTGATGTTCCAAAGGGATACTTTACAGTTTATGTTGGTGAGGTACAAAAGAAGCGTTTTGTCATCCCACTATCTTACTTGAACCAGCCATCTTTTCAAGATTTGTTGAGTCAAGCAGAAGAAGAATTTGGATATAATCATCCAATGGGTGGCATCACAATTCCTTGCAGTGAAGACTTTTTCCTCAATCTCACTCGGAGTTTGAATGATTAA

mRNA sequence

ATGGGTTTCCGTCTACCTAGAATTGTTACTGCTAAGCAAAGTCTTCAGCGATCTTCATCAACAGGGAACGGAGCATCTCCAAAGGCTGTTGATGTTCCAAAGGGATACTTTACAGTTTATGTTGGTGAGGTACAAAAGAAGCGTTTTGTCATCCCACTATCTTACTTGAACCAGCCATCTTTTCAAGATTTGTTGAGTCAAGCAGAAGAAGAATTTGGATATAATCATCCAATGGGTGGCATCACAATTCCTTGCAGTGAAGACTTTTTCCTCAATCTCACTCGGAGTTTGAATGATTAA

Coding sequence (CDS)

ATGGGTTTCCGTCTACCTAGAATTGTTACTGCTAAGCAAAGTCTTCAGCGATCTTCATCAACAGGGAACGGAGCATCTCCAAAGGCTGTTGATGTTCCAAAGGGATACTTTACAGTTTATGTTGGTGAGGTACAAAAGAAGCGTTTTGTCATCCCACTATCTTACTTGAACCAGCCATCTTTTCAAGATTTGTTGAGTCAAGCAGAAGAAGAATTTGGATATAATCATCCAATGGGTGGCATCACAATTCCTTGCAGTGAAGACTTTTTCCTCAATCTCACTCGGAGTTTGAATGATTAA

Protein sequence

MGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGGITIPCSEDFFLNLTRSLND

Homology

[Close]

BLAST of CcUC02G021990.1 vs. NCBI nr
Match: XP_038887254.1 (auxin-induced protein 15A-like [Benincasa hispida])

HSP 1 Score: 196.8 bits (499), Expect = 8.7e-47
Identity = 95/99 (95.96%), Postives = 97/99 (97.98%), Query Frame = 0


Query: 1   MGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPS 60
           MGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGE QKKRFVIPLSYLNQPS
Sbjct: 1   MGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPS 60

Query: 61  FQDLLSQAEEEFGYNHPMGGITIPCSEDFFLNLTRSLND 100
           FQDLLSQAEEEFGYNHPMGGITIPCSE+ FLNLT+SLND
Sbjct: 61  FQDLLSQAEEEFGYNHPMGGITIPCSEEIFLNLTQSLND 99

[Close]

BLAST of CcUC02G021990.1 vs. NCBI nr
Match: XP_038887900.1 (auxin-induced protein X10A-like [Benincasa hispida])

HSP 1 Score: 194.9 bits (494), Expect = 3.3e-46
Identity = 95/99 (95.96%), Postives = 96/99 (96.97%), Query Frame = 0


Query: 1   MGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPS 60
           MGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGE QKKRFVIPLSYLNQPS
Sbjct: 40  MGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPS 99

Query: 61  FQDLLSQAEEEFGYNHPMGGITIPCSEDFFLNLTRSLND 100
           FQDLLSQAEEEFGYNHPMGGITIPC ED FL+LTRSLND
Sbjct: 100 FQDLLSQAEEEFGYNHPMGGITIPCREDEFLDLTRSLND 138

[Close]

BLAST of CcUC02G021990.1 vs. NCBI nr
Match: XP_022952257.1 (auxin-induced protein 15A-like [Cucurbita moschata])

HSP 1 Score: 194.5 bits (493), Expect = 4.3e-46
Identity = 94/99 (94.95%), Postives = 96/99 (96.97%), Query Frame = 0


Query: 1   MGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPS 60
           MGFRLPRIV+ KQSLQRSSSTGNGASPKAVDVPKGYFTVYVGE QKKRFVIPLSYLNQPS
Sbjct: 1   MGFRLPRIVSTKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEAQKKRFVIPLSYLNQPS 60

Query: 61  FQDLLSQAEEEFGYNHPMGGITIPCSEDFFLNLTRSLND 100
           FQDLLSQAEEEFGYNHPMGGITIPCSED FL+LTRSLND
Sbjct: 61  FQDLLSQAEEEFGYNHPMGGITIPCSEDNFLDLTRSLND 99

[Close]

BLAST of CcUC02G021990.1 vs. NCBI nr
Match: XP_022952255.1 (auxin-induced protein X10A-like [Cucurbita moschata] >KAG6572085.1 hypothetical protein SDJN03_28813, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 194.5 bits (493), Expect = 4.3e-46
Identity = 94/99 (94.95%), Postives = 96/99 (96.97%), Query Frame = 0


Query: 1   MGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPS 60
           MGFRLPRIV+ KQSLQRSSSTGNGASPKAVDVPKGYFTVYVGE QKKRFVIPLSYLNQPS
Sbjct: 1   MGFRLPRIVSTKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEAQKKRFVIPLSYLNQPS 60

Query: 61  FQDLLSQAEEEFGYNHPMGGITIPCSEDFFLNLTRSLND 100
           FQDLLSQAEEEFGYNHPMGGITIPCSED FL+LTRSLND
Sbjct: 61  FQDLLSQAEEEFGYNHPMGGITIPCSEDDFLDLTRSLND 99

[Close]

BLAST of CcUC02G021990.1 vs. NCBI nr
Match: XP_023553777.1 (auxin-induced protein X10A-like [Cucurbita pepo subsp. pepo] >XP_023553882.1 auxin-induced protein X10A-like [Cucurbita pepo subsp. pepo] >XP_023554331.1 auxin-induced protein X10A-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 194.1 bits (492), Expect = 5.6e-46
Identity = 94/99 (94.95%), Postives = 95/99 (95.96%), Query Frame = 0


Query: 1   MGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPS 60
           MGFRLPRIV+ KQSLQRSSSTGNGASPKAVDVPKGYFTVYVGE QKKRFVIPLSYLNQPS
Sbjct: 1   MGFRLPRIVSTKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEAQKKRFVIPLSYLNQPS 60

Query: 61  FQDLLSQAEEEFGYNHPMGGITIPCSEDFFLNLTRSLND 100
           FQDLLSQAEEEFGYNHPMGGITIPCSED FL LTRSLND
Sbjct: 61  FQDLLSQAEEEFGYNHPMGGITIPCSEDDFLELTRSLND 99

[Close]

BLAST of CcUC02G021990.1 vs. ExPASy Swiss-Prot
Match: P33080 (Auxin-induced protein X10A OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 5.0e-29
Identity = 62/99 (62.63%), Postives = 77/99 (77.78%), Query Frame = 0


Query: 1   MGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPS 60
           MGFRLP        ++++S   N AS K+V+VPKGY  VYVG+ + +RF+IP+SYLNQPS
Sbjct: 1   MGFRLP-------GIRKTSIAANQASSKSVEVPKGYLVVYVGD-KMRRFLIPVSYLNQPS 60

Query: 61  FQDLLSQAEEEFGYNHPMGGITIPCSEDFFLNLTRSLND 100
           FQDLL+QAEEEFGY+HPMGG+TIPC ED FL +T  LND
Sbjct: 61  FQDLLNQAEEEFGYDHPMGGLTIPCKEDEFLTVTSHLND 91

[Close]

BLAST of CcUC02G021990.1 vs. ExPASy Swiss-Prot
Match: P33083 (Auxin-induced protein 6B OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 3.2e-28
Identity = 63/98 (64.29%), Postives = 76/98 (77.55%), Query Frame = 0


Query: 1  MGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPS 60
          MGFRLP        ++++S + N AS KAVDV KGY  VYVGE + +RFVIP+SYLN+PS
Sbjct: 1  MGFRLP-------GIRKASFSANQASSKAVDVEKGYLAVYVGE-KMRRFVIPVSYLNKPS 60

Query: 61 FQDLLSQAEEEFGYNHPMGGITIPCSEDFFLNLTRSLN 99
          FQDLLSQAEEEFGY+HP GG+TIPCSED F ++T  LN
Sbjct: 61 FQDLLSQAEEEFGYHHPNGGLTIPCSEDVFQHITSFLN 90

[Close]

BLAST of CcUC02G021990.1 vs. ExPASy Swiss-Prot
Match: P32295 (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 GN=ARG7 PE=2 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 2.1e-27
Identity = 61/98 (62.24%), Postives = 73/98 (74.49%), Query Frame = 0


Query: 1  MGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPS 60
          MGFRLP        ++++ S  N AS K +D PKGY  VYVGE   KRFVIP+S+LNQP 
Sbjct: 1  MGFRLP-------GIRKTLSARNEASSKVLDAPKGYLAVYVGE-NMKRFVIPVSHLNQPL 60

Query: 61 FQDLLSQAEEEFGYNHPMGGITIPCSEDFFLNLTRSLN 99
          FQDLLSQAEEEFGY+HPMGG+TIPCSED F ++T  L+
Sbjct: 61 FQDLLSQAEEEFGYDHPMGGLTIPCSEDLFQHITSCLS 90

[Close]

BLAST of CcUC02G021990.1 vs. ExPASy Swiss-Prot
Match: P33079 (Auxin-induced protein 10A5 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 1.8e-26
Identity = 60/99 (60.61%), Postives = 75/99 (75.76%), Query Frame = 0


Query: 1   MGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPS 60
           MGFR+  IV      +R+S     A+ K VDVPKGY  VYVG+ + +RF IP+SYLN+PS
Sbjct: 1   MGFRIAGIV------RRTSFYTTQAASKRVDVPKGYAAVYVGD-KMRRFTIPVSYLNEPS 60

Query: 61  FQDLLSQAEEEFGYNHPMGGITIPCSEDFFLNLTRSLND 100
           FQ+LLSQAEEEFGY+HPMGG+TIPC E+ FLN+T  LN+
Sbjct: 61  FQELLSQAEEEFGYDHPMGGLTIPCKEEEFLNVTAHLNE 92

[Close]

BLAST of CcUC02G021990.1 vs. ExPASy Swiss-Prot
Match: P33081 (Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 1.8e-26
Identity = 63/98 (64.29%), Postives = 68/98 (69.39%), Query Frame = 0


Query: 1  MGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPS 60
          MGFRLP I  A                KA D PKGY  VYVGE + KRFVIP+SYLNQPS
Sbjct: 1  MGFRLPGIRKAS---------------KAADAPKGYLAVYVGE-KLKRFVIPVSYLNQPS 60

Query: 61 FQDLLSQAEEEFGYNHPMGGITIPCSEDFFLNLTRSLN 99
          FQDLLSQAEEEFGY+HPMGG+TIPCSED F  +T  LN
Sbjct: 61 FQDLLSQAEEEFGYDHPMGGLTIPCSEDVFQCITSCLN 82

[Close]

BLAST of CcUC02G021990.1 vs. ExPASy TrEMBL
Match: A0A6J1GJW5 (auxin-induced protein 15A-like OS=Cucurbita moschata OX=3662 GN=LOC111454987 PE=3 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 2.1e-46
Identity = 94/99 (94.95%), Postives = 96/99 (96.97%), Query Frame = 0


Query: 1   MGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPS 60
           MGFRLPRIV+ KQSLQRSSSTGNGASPKAVDVPKGYFTVYVGE QKKRFVIPLSYLNQPS
Sbjct: 1   MGFRLPRIVSTKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEAQKKRFVIPLSYLNQPS 60

Query: 61  FQDLLSQAEEEFGYNHPMGGITIPCSEDFFLNLTRSLND 100
           FQDLLSQAEEEFGYNHPMGGITIPCSED FL+LTRSLND
Sbjct: 61  FQDLLSQAEEEFGYNHPMGGITIPCSEDNFLDLTRSLND 99

[Close]

BLAST of CcUC02G021990.1 vs. ExPASy TrEMBL
Match: A0A6J1GL91 (auxin-induced protein X10A-like OS=Cucurbita moschata OX=3662 GN=LOC111454985 PE=3 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 2.1e-46
Identity = 94/99 (94.95%), Postives = 96/99 (96.97%), Query Frame = 0


Query: 1   MGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPS 60
           MGFRLPRIV+ KQSLQRSSSTGNGASPKAVDVPKGYFTVYVGE QKKRFVIPLSYLNQPS
Sbjct: 1   MGFRLPRIVSTKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEAQKKRFVIPLSYLNQPS 60

Query: 61  FQDLLSQAEEEFGYNHPMGGITIPCSEDFFLNLTRSLND 100
           FQDLLSQAEEEFGYNHPMGGITIPCSED FL+LTRSLND
Sbjct: 61  FQDLLSQAEEEFGYNHPMGGITIPCSEDDFLDLTRSLND 99

[Close]

BLAST of CcUC02G021990.1 vs. ExPASy TrEMBL
Match: A0A0A0K4J0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G008980 PE=3 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 7.9e-46
Identity = 92/99 (92.93%), Postives = 96/99 (96.97%), Query Frame = 0


Query: 1   MGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPS 60
           MGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYF VY+GE QKKRFVIPLSYLNQPS
Sbjct: 1   MGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFAVYIGEEQKKRFVIPLSYLNQPS 60

Query: 61  FQDLLSQAEEEFGYNHPMGGITIPCSEDFFLNLTRSLND 100
           FQDLLSQAEEEFGYNHPMGGITIPC+E +FL+LTRSLND
Sbjct: 61  FQDLLSQAEEEFGYNHPMGGITIPCNEAYFLDLTRSLND 99

[Close]

BLAST of CcUC02G021990.1 vs. ExPASy TrEMBL
Match: A0A5A7U7Y6 (Auxin-induced protein 15A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G001220 PE=3 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 5.1e-45
Identity = 89/99 (89.90%), Postives = 95/99 (95.96%), Query Frame = 0


Query: 1   MGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPS 60
           MGFRLPRIVTAKQSLQRSSSTGNGASPKA+DVPKGYF VY+GE QKKRFVIPLSYLNQPS
Sbjct: 1   MGFRLPRIVTAKQSLQRSSSTGNGASPKAIDVPKGYFAVYIGEEQKKRFVIPLSYLNQPS 60

Query: 61  FQDLLSQAEEEFGYNHPMGGITIPCSEDFFLNLTRSLND 100
           FQDLLSQAEE+FGYNHPMGGITIPCSED+FL++T  LND
Sbjct: 61  FQDLLSQAEEKFGYNHPMGGITIPCSEDYFLDVTERLND 99

[Close]

BLAST of CcUC02G021990.1 vs. ExPASy TrEMBL
Match: A0A6J1HWI6 (auxin-induced protein X10A-like OS=Cucurbita maxima OX=3661 GN=LOC111468493 PE=3 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 5.1e-45
Identity = 92/99 (92.93%), Postives = 95/99 (95.96%), Query Frame = 0


Query: 1   MGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPS 60
           MGFRLPRIV+ KQSLQRSSSTGNGASPKAVDVPKGYFTVYVGE QKKRFVIPLSYLNQPS
Sbjct: 1   MGFRLPRIVSTKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEAQKKRFVIPLSYLNQPS 60

Query: 61  FQDLLSQAEEEFGYNHPMGGITIPCSEDFFLNLTRSLND 100
           FQDLLSQAEEEFGYNHPMGGITIPCSE  FL+LTR+LND
Sbjct: 61  FQDLLSQAEEEFGYNHPMGGITIPCSEYDFLDLTRNLND 99

[Close]

BLAST of CcUC02G021990.1 vs. TAIR 10
Match: AT4G38840.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 124.0 bits (310), Expect = 6.6e-29
Identity = 55/99 (55.56%), Postives = 77/99 (77.78%), Query Frame = 0


Query: 1  MGFRLPRIV-TAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNQP 60
          M  R+PR++ ++KQ L+++    + +S  ++DVPKGY  VYVGE   KRFV+P+SYL+QP
Sbjct: 1  MAIRIPRVLQSSKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQP 60

Query: 61 SFQDLLSQAEEEFGYNHPMGGITIPCSEDFFLNLTRSLN 99
          SFQDLL +AEEEFG++HPMGG+TIPCSE+ F++L    N
Sbjct: 61 SFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDLASRFN 99

[Close]

BLAST of CcUC02G021990.1 vs. TAIR 10
Match: AT5G18080.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 112.8 bits (281), Expect = 1.5e-25
Identity = 52/90 (57.78%), Postives = 69/90 (76.67%), Query Frame = 0


Query: 8  IVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQ 67
          ++ AK+ L RS+  G+ A       PKG+  VYVGE QKKR+++P+SYLNQPSFQ LLS+
Sbjct: 7  LLGAKKILSRSTGAGSAA-------PKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSK 66

Query: 68 AEEEFGYNHPMGGITIPCSEDFFLNLTRSL 98
          +EEEFG++HPMGG+TIPC ED F+N+T  L
Sbjct: 67 SEEEFGFDHPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of CcUC02G021990.1 vs. TAIR 10
Match: AT5G18010.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 111.3 bits (277), Expect = 4.5e-25
Identity = 52/90 (57.78%), Postives = 69/90 (76.67%), Query Frame = 0


Query: 8  IVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQ 67
          ++ AK+ L RS++ G+ A       PKG+  VYVGE QKKR+++PLSYL+QPSFQ LLS+
Sbjct: 7  LLGAKKILSRSTAAGSAA-------PKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSK 66

Query: 68 AEEEFGYNHPMGGITIPCSEDFFLNLTRSL 98
          +EEEFG+ HPMGG+TIPC ED F+N+T  L
Sbjct: 67 SEEEFGFAHPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of CcUC02G021990.1 vs. TAIR 10
Match: AT5G18020.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 110.2 bits (274), Expect = 9.9e-25
Identity = 50/87 (57.47%), Postives = 68/87 (78.16%), Query Frame = 0


Query: 8  IVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQ 67
          ++ AK+ L RS++  + A       PKG+  VYVGE QKKR+++P+SYLNQPSFQ LLS+
Sbjct: 7  LLGAKKILSRSTTAASAA-------PKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSK 66

Query: 68 AEEEFGYNHPMGGITIPCSEDFFLNLT 95
          +EEEFG++HPMGG+TIPC ED F+N+T
Sbjct: 67 SEEEFGFDHPMGGLTIPCPEDTFINVT 86

[Close]

BLAST of CcUC02G021990.1 vs. TAIR 10
Match: AT5G18060.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 110.2 bits (274), Expect = 9.9e-25
Identity = 51/91 (56.04%), Postives = 69/91 (75.82%), Query Frame = 0


Query: 8  IVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQ 67
          ++ AK+ L RS++  +         PKG+  VYVGE QKKR+++PLSYLNQPSFQ LLS+
Sbjct: 7  LLVAKKILSRSAAAVSAP-------PKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSK 66

Query: 68 AEEEFGYNHPMGGITIPCSEDFFLNLTRSLN 99
          +EEEFG++HPMGG+TIPC ED F+N+T  L+
Sbjct: 67 SEEEFGFDHPMGGLTIPCPEDTFINVTSRLH 90

The following BLAST results are available for this feature:

BLAST of CcUC02G021990.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038887254.1	8.7e-47	95.96	auxin-induced protein 15A-like [Benincasa hispida]	[more]
XP_038887900.1	3.3e-46	95.96	auxin-induced protein X10A-like [Benincasa hispida]	[more]
XP_022952257.1	4.3e-46	94.95	auxin-induced protein 15A-like [Cucurbita moschata]	[more]
XP_022952255.1	4.3e-46	94.95	auxin-induced protein X10A-like [Cucurbita moschata] >KAG6572085.1 hypothetical ...	[more]
XP_023553777.1	5.6e-46	94.95	auxin-induced protein X10A-like [Cucurbita pepo subsp. pepo] >XP_023553882.1 aux...	[more]

BLAST of CcUC02G021990.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P33080	5.0e-29	62.63	Auxin-induced protein X10A OS=Glycine max OX=3847 PE=2 SV=1	[more]
P33083	3.2e-28	64.29	Auxin-induced protein 6B OS=Glycine max OX=3847 PE=2 SV=1	[more]
P32295	2.1e-27	62.24	Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 ...	[more]
P33079	1.8e-26	60.61	Auxin-induced protein 10A5 OS=Glycine max OX=3847 PE=2 SV=1	[more]
P33081	1.8e-26	64.29	Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1	[more]

BLAST of CcUC02G021990.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GJW5	2.1e-46	94.95	auxin-induced protein 15A-like OS=Cucurbita moschata OX=3662 GN=LOC111454987 PE=...	[more]
A0A6J1GL91	2.1e-46	94.95	auxin-induced protein X10A-like OS=Cucurbita moschata OX=3662 GN=LOC111454985 PE...	[more]
A0A0A0K4J0	7.9e-46	92.93	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G008980 PE=3 SV=1	[more]
A0A5A7U7Y6	5.1e-45	89.90	Auxin-induced protein 15A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A6J1HWI6	5.1e-45	92.93	auxin-induced protein X10A-like OS=Cucurbita maxima OX=3661 GN=LOC111468493 PE=3...	[more]

BLAST of CcUC02G021990.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G38840.1	6.6e-29	55.56	SAUR-like auxin-responsive protein family	[more]
AT5G18080.1	1.5e-25	57.78	SAUR-like auxin-responsive protein family	[more]
AT5G18010.1	4.5e-25	57.78	SAUR-like auxin-responsive protein family	[more]
AT5G18020.1	9.9e-25	57.47	SAUR-like auxin-responsive protein family	[more]
AT5G18060.1	9.9e-25	56.04	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 17..96 e-value: 1.9E-25 score: 88.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..26
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..30
None	No IPR available	PANTHER	PTHR31929:SF69	SUBFAMILY NOT NAMED	coord: 11..96
None	No IPR available	PANTHER	PTHR31929	SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED	coord: 11..96

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CcUC02G021990	CcUC02G021990	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC02G021990.1-exon	CcUC02G021990.1-exon-CicolChr02:4379198..4379497	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC02G021990.1-cds	CcUC02G021990.1-cds-CicolChr02:4379198..4379497	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CcUC02G021990.1	CcUC02G021990.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin