CcUC02G018990.1 (mRNA) Watermelon (PI 537277) v1

Overview


Name	CcUC02G018990.1
Type	mRNA
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	zinc finger CCCH domain-containing protein 40 isoform X1
Location	CicolChr02: 1700889 .. 1708313 (-)
Sequence length	2110
RNA-Seq Expression	CcUC02G018990.1
Synteny	CcUC02G018990.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGCCATTGCTTTGCAACGAAGGAAAAATCTAAAGCTGCAAAAAAGAGGAGAAATAAAAACCCCTCATCACGGTGTTCGTCAAAGCGGTCGGCGTTTTCCTTCAGATAGCTCACAAAGTTCAGCTCTCTTAATTGACAAGCCATCGAATCTGTTCTATTCTATTATTTTTGCATATTTTCCGATTCTTGGCAATCTTTGTAAGCGAATTTCATCGTCTGAACTACTCCAATTCGGTTCTACATCTATTCTTTCTGATTCGTCGTTGCAAGTACAAACGGCGACTACTGCGACTTCCAATACATACTTCTTCTCTGTTATTGTTCATGTTCATCCATGATGGTTGGCCGCAAACTCTTCAAAACAAAGTTATGTGTTCTTTATCAGAAAGGCCACTGTTCTCGCCCAAGTTGCTCCTTTGCTCACGGGAACGCTGAACTCAGACGATTTGCTGGTGCTTCTACCGGTAATTTTCCCCTTATGTCTCCAATTTTGTTTTATGTTCCTTAATTTTGGGGTTTAGGGTTGATGAAATGGAAGTTTATAGTCTATATGTGTATGCTAATTGTTGTTGTATATGATTCTATTCCCAATTTCTCAATCTTATTATAATTGGTTTTGGATATATGTTTTTTATTATTCTTACATTCAACGCTAACAGTGATGGTGATATTATTGTTGTTGGGTTTAATTTGTGGGTATGGGTGTGATTTAAGGGATCTCTGAGATAATTCCTTGGGAGAGGGATAGACTAATTTAGGACTGATGGTTTTTTCTTTCTTCCATTATGGTCTTCTTGTTATAATAAATTTTGAGGACTTAATTGATAGCATTTTTATTTATCCTATTAATCTCTGGCTTTCTACTCTTTCTTCTTTCTGTCTCTTCTTGACTCTTGTTATGTACCATTTTGCCAATGTGTATGTTTTTTCTTTTCTTAATTATGTGTGCATATTTCCCGAATGCTCCTTATGGTGCATTGTGATGGAGTGGTATCTTTAGAATGGGCTAGGCTCTTTCGGTTAATCATTTGAAACTATTGTGTCAGCTGTGTATGTATAGCGATATGAACACAATCTCCCTCGCCTATGGCTCTGTGGTTTGGGTATCTTGTTGCTTGCTATCTTCGATATTTTAATTGGTTCTGCTCAAGTCGTCACATGAGACTCCACGCCTCTACAATGGATATTTATTATAGATGGACGTTGGATGATTCCAATAATGCAAGATATAAAAATTTCTCCAAACTTGCATGGTCACTGAAGTGGCTAGTAAAAAAATATTCATCCGGATCAGAGCTTTTTCATTGGAATGGCAATGGAAATGGTGGATTTTTCTCTATTGAGCTGCCTGTGACATATTTCTGGAGATGTTTATGGCCCTTGTGCTGCATCAGCTTAACCAGAAACTACTTGTTGAAGATTATAATTGTTTTCCATAATTTATACATCTCCCTCAGCTTTTGTTTAATCATCCCATTACTATCTTCTGCGTTATGCTACCGTTGTTCATGGGGCTTCATTTTTCTTAGGAGAGGTTCTTCTTTGGCTTATGCCTCCTGAGTATGCCAAATGGACTTCCTCTTGGAGTAATGCAATTTTTATGGGAGTATTGCATGAAGATCAAAATTGAATCTATGTCATTGGACTGTACTTGTATCATTATGTGGAATCCCAGAGTTATCTCCCTTTTGGATCAAAGTTATGCAAACTTCTTGTTCATCGTGGACACAGGAGTGTAATCCTTCGTTCTATTCTCAATATGAAGGTTATCCCTGGTTTAACCTCGGGCATGGATTTTTCTATATCTTTTCATTATTTATATGGATCTTTTGGAACTGGCATGGCGGCACTATTACTGTTCCTTATTTTGTTACTCATCTTTTCCATTTAATGGTAAGATAAGCCTTGTAAGGACTTCATTGATTCATTAATTGTTCTTTAGAAAGAATATCTGGCATTAACTAAACTTGTTAAATTAAATTTTCCCCATCTTTGCAGGTAGACAGGAATATAGAGGAAATGATTTAAGGCATAAGCTTGACAGCAGACATTCTCCCCTGCAGGAAAGGGATTCTAGAGGGCAACATGGACCTCGTGGTAGCCCCCCCCACCCCATCCCACCCCACCCACCCAACCCAAAGTAGTCTTTTCTCCAATTTCCTCCTATGCTACAATCCCCAAATTATATGACGTTTCATTTTTATATTTTCTAATTAAGGAATGTAGGAAGCTAGGTTCTTAAGACACACATGTGCACTTATATAGTTTAAAAGAATATGTGGACTACATAATCCTTTTACATGTTGTAACAGCAAAGTTCTTCCCTGATATCTCTCATTTTTGAATTGAAGTTGCAGAGTATAGCTCATCATGGTCACTTGAACGACATAGGTAAACTGTCACAACTCTTGTATGGTTTTCTCAAGTTATTTTCAACTAGTTCAAGCAAAGGAAGGGTGGGAAGTGATTCCAGGATGGAATTATCTATCGAGGGATAAATTTTTATCTGAAGCCCTTGCGAAGTATGTTTATGAGATTCTTCTCACGAGAAAATGGTCATATGATATTGACAGCTTTTTTCCTACAATAGTACTTCCAGTTCATTATTTATTTATTTTTCTTATTAATAAGAGAGTACTCTAGTGCCTGATCCCATTATTTCTTGAACCTTACTTCTAGCCTTTAGGTTTGAAGGTCTTATATGCCGTGATATTAGTATGGCTTGAATTCATTCTTCTGCACCCAATTATCTTTTCATGAGTACTAGCCTAGCAAATTACTTCATAGTAATTTACTGGTGGATACTTTGAAATGTTACACATTCTTGTCTCAGTGACCGTAAGAGGAGGAAAAAGGAACTTGGGGATTCCCGTCGTGATTATTCTGGAAATTTGAGGATTTCAGATAGAAATGAAGAAGAAGATAGAGAAGGGAAAACCTCATTTACTTCTAGAGACACTCTTGAGGGGCAGGTACACATAACACAATTGTTTTCTAACTTAAACCTTCCATTTATTAGAAAGTCACTCTCTGGAAATCTTGGTTGATCATCTTTGATTACACAGTTAAACAAGATGCAGACAGATATTGAGATGGCTGAGCACCACAAACACCAAGCTGAGGTCAGTACTGTCTCTTCCTTTTAGTTGCTTTCTTCCTCTAATGTTGTGCAGGCAATAGGTAAGACACATATCCTTTTTTCTATCCATGTACCCATTGGGGGATTTCCCATTTTTTTTTTAAATTTAAATCAACTTTTTAAAATTTTCCTTTATGATAGTATTTCTTCAAATGTATTATTTGTAGGTGGTTTAAAGTGTTTAGTCATTGTTGGGAAATTCTCTTTGTAACATGTTGGTTGAAGTGAGTCGTATTGTCACTAGTCACATTACCAGTCACTTTTAATGAAGTTTTTCTCTCACACAAACGCACACACACATATATATCTGCATGCACACACACATATTTGTGTATATATATGCACATCTATATATATATGTATAAATATATATGTGTGTATAGATATGTATATATTGATTTTATTTGGCTACAAATTGGTATAAAATCACATTAATCTGGAATGGATCCAGAACTTAGGAACGAATTGCTGAAAATTGATGAAATGGTGAAAGGGCAGAGGATGATTTAGTGTAAATGAAGTCAGTGGTTAGCAGTTTGAGTACGACCGAACTTGGGTCAGAGATTTTGGAGAAAAGACATAAAAATTAGAAGCCATTGAACTTTGTTAGTGAGCAACAGAGATACAAATGAAAGGGGTCATGCGTACAAAAGTGTCACATGGGCTTACAGGTTCAATGCCATTCCTAGACTAGCTGAAGTCAAATTCATAAACTGGAAGCTAAGAGTTGGGTGGGATCTAGTTGGAGATTTTGATATTGGTAGAATGCAGCATGTGTTACAATTTTAGCCAAATTGATGCAATTTGAGAACCTAGTTGAATTGGGACTAGATTATCTCAACTTTATTTATTTATTTATTTATTTTTATAAATGGAAAAGAACCTCTTGAATGCTGTTGAAAAAAGGGGCGGAGGATCATAGAAGCTATTGCAATAAAACTCATGAATGCTTTCATGGTTCCAAACAGAACTAGCACAGATTGGGAAGATTTGATACTGTTAAGAGAGGAATAATATGATCATGATTGAAACGGAATAGTCCTTAATGATTATGGTTGGTGTGGAAGTCTTCGATGACGAATGGACCAAGGGAGGGGTTGAAGCATTTGGATTTTAGGAGCACAACTTGGGTCGGTACTAGCTGTGGGGTTCGTGACTGCTACCTGCAATGAGGGTTACAAAGTTGTATTTGGTGTCAGGAATGGGAAGATTTATGCCTATTCTTCTCTTTTCTTTTATTTTTTAAAATTAAGCATCCCTCAAACTTTCCTGCCTTTTTGGTTGAAGCCTTTTGTGTGCAGCAGTCCACTGATGGTGGATGGGCAAAAAACAAAATGAGTGGAATGAGGTTCATTTAGAATGGATTAGTAAGAAAGAGGTGCAGCCTGACTGATTTCATTTTTCTAGATCATTGTGGTATTCATCAAATTTTACAAGACAGAAGTTTGCTTGGTTAGCCTCCCCATGGATTCGGATATCTGTCTATACATTGAGATAGTTATATATTTATATAAAGATAATTGAGAAAGATAAACTTGCTTGGGAAAGTCAACCACAAGAGACTTTGGAAGAAAATCATGCACAAGAGGAAGCCAGGTGCTACAATTGACAGGGTTACTAAGCTGGACTCTGAGCCAAATGTTAAAAGTTTTTCCAGTGCTTACATTAAGAGTCACAGTTCTGTGTTCATCAACTAGGCAACAGGGCGATGGGTGGTGGTTATGTTGCATACCAGCTAAACACTTTTTTTAGCATTAGCCTGTAGGTGAATGAGTGAGCTTGTTAGTCAGTTATGGGGTTGTAATAATCAAAATAAGGTTAGGGATTTGTCAGGTAGGTAGATTACAGGAACGGTTTTGAGAAAAAGAATTCAGCATCTTGATGGCATATTAAATCTTTGTAATTTCCTATTTTGCAATAACGTGGATTCATATCACCCATAGATTATTGTTAATGTCTACTAGTTGCAAACTTAGCGTCCAGGTTGACCTAAAATTGAAAATTAGGGTATTTAGTTCATCCCTTAATTCTTCTGAGATGGTTGATTTGAAACTCTCTCAAGTGCGGAGGTGCTTTTATGCTGTCTCAAGTTTCATATGTTTTGTTGGCCATTTTGATTGGGCTATGTTTCGAGATAATATGTAACTAAATTCTATTGATGAAATGATTCTATAAATATATTGAAGATATTAACAAATTTTTCTTTATTTTGAAGGTCTACCTGGACGAGAAAATTCAAGAAGTGGATAGTTTGACTTCTAGAATTCAGGAGCTAGAATCTCAATTATATAAAGAGAGGCAGGAGTGTAGAAGGTACACGTTGTTGTCCTGTTTCCTGCTGAAGGTCCACCTGTCTCTTATTCCTATTTTTGTTGGATCTAATATTCAGGATCAAATCAAAAATCAAGAAGTTTGTCAAAGCACATAATCGTTACTCAAGGTTACAAGATGAACTGAAACGGCAAGTATACTTGTCCTATTCTTTTGATTGCGTTTTCTAATGCTCATGATTTTCAGGAAATTATGGTAACTTTTCTAAATGTGTAGATCGCAAGTCCGACTTCAACAATTGGGAGATCAGCTGGGACCAGATGTTAATAAAATTGGTGCCAATGAAGAAGACTCAAGTATCAATATTGTGAGCGATGGAGAGGACCCTGGTTATCATGCGTCAGGCCCTTTTCATGACCTGCAAAAAGACACTTCTGCAAGCAAGAGGAAGATGCATGCTGTTCAAGATACTGCAGAGAACTCAAATCGAGGTGCCTTTTGAGACTTAATAATTTCTTCATATGGATGTGCCATTTAAAAGGAAAAATTATTAGTTTGAAATCTCTTAATATGCCCTCAGCCCTAGTAAGCTCCTTGTTTATTTCAAGATGTTTCAATGCAATCTTCTTTTTTCTTTGTGGTGGTAGTGGTGTTTCTCTTTTCCTTTTTTCCCCCTTTTTATGTGTTGGGGGTGATATTTTAATTTTGATTTTTTTTTTCTCCCGTACTTAAAATGATATGTGTGCATGCTACATTAGCTGATTTAAACAAAGGAAATAAAGAGGCAGTGGTGAGAAGGATCTCTCGGTGGAATGCCCATCCTGCTAAATCAGTATATAGCAAAATTGAGGCGGTTGGCAATGAAGTCAATGATCTGATACCTACAGCAAATGAAAGCAGGCAGAAGAGGGGAAGGACATCTAGTAGTGTTTCTACTGCGGACAAGGTGACTTTGATATTTTCCTAATCAATTTTAATTGTTTTTACAATTTACTATGTGCCGTGTCTTCGAGGCTTGGATGTCTGATTAGTTATGACATATGGAGTGCAAAGTCTATACGCTATGGCAGTGTGAAGTGTGCTACTATCTATTTAATTCGTTCTTCCATAGTTTTATAGCATTGTTGTTTTCTAGACCTAGAATAACATCCCCCCTCCCTTCTTTATCTCGCAAAATCAATTTGAGCCTTCCAATACATTACAAATGACATTAATAAATTCTATTGTTCATCCATGCACTTAATTCTCAACTCAAATTTGCAGGTTAGGGGTCTAGAGTCAGGTGTTGTAGTGCCATTAACCAGCATGGCTGCCCATGCAGTTGATGAGGAAGTTGATATTGACTTGGAAATCAACAATGAAGTGAAAGAACCGAGGGAAAGTACTAAGGAGGCTGCGTCAGGCAGCCTGCCTTTCCTTCCCCCTCCACCACCTCCTCCAATCCGTGAATTCAACCATTCAAGGGTTAGCAACTTCTCAAAATTTCACAACTTTTCTTCAGTTCTCTTGCAAAATTGTCGATTCCTTGAAGTTGTGTAAATACTTAAGAAAGAAGTTCACCTTTCATTTTTCTGGATCAATCTATACATATTAAATATGGATTGCAGTATGAGGGTGAACCAAACCAATGTAGAAAGCCATTGGTCTTATTAAATATGGTTTTGTTTCTTGGATTGCAGTATGAGGGTGAAGATCAAAATGTAGATGTGGAGGTGGTTGATGATGAAAGGGAAGGTATGGACGATGCTTAAGATTAGATCCTGCTGTAGAGGTTAGAACAACTCTTAGTATAGTGAAAGTGGATTATTGGTTTTTATGGGTTCTTGTTAAATACACTTGTAATTTCCAGTTTTGTTAGCATATGAGATATCGACGACCTTCCCCCATTCTGTTCTTTCTTGGCATATTTTGATTGCTATTTCCGAGTTACCTTGGTGAAGCAAATCAATGCACTAGTTCACTTGTTAGTTAATTGTGGGTCGTCAGCTGAGGATTATATATATGTTTTGAAACCTG

mRNA sequence

CGCCATTGCTTTGCAACGAAGGAAAAATCTAAAGCTGCAAAAAAGAGGAGAAATAAAAACCCCTCATCACGGTGTTCGTCAAAGCGGTCGGCGTTTTCCTTCAGATAGCTCACAAAGTTCAGCTCTCTTAATTGACAAGCCATCGAATCTGTTCTATTCTATTATTTTTGCATATTTTCCGATTCTTGGCAATCTTTGTAAGCGAATTTCATCGTCTGAACTACTCCAATTCGGTTCTACATCTATTCTTTCTGATTCGTCGTTGCAAGTACAAACGGCGACTACTGCGACTTCCAATACATACTTCTTCTCTGTTATTGTTCATGTTCATCCATGATGGTTGGCCGCAAACTCTTCAAAACAAAGTTATGTGTTCTTTATCAGAAAGGCCACTGTTCTCGCCCAAGTTGCTCCTTTGCTCACGGGAACGCTGAACTCAGACGATTTGCTGGTGCTTCTACCGGAGAGGTTCTTCTTTGGCTTATGCCTCCTGAGTATGCCAAATGGACTTCCTCTTGGAAGTTATCTCCCTTTTGGATCAAAGTTATGCAAACTTCTTGTTCATCGTGGACACAGGAGTGTAATCCTTCGTTCTATTCTCAATATGAAGGTAGACAGGAATATAGAGGAAATGATTTAAGGCATAAGCTTGACAGCAGACATTCTCCCCTGCAGGAAAGGGATTCTAGAGGGCAACATGGACCTCGTGTTCAAGCAAAGGAAGGGTGGGAAGTGATTCCAGGATGGAATTATCTATCGAGGGATAAATTTTTATCTGAAGCCCTTGCGAATGACCGTAAGAGGAGGAAAAAGGAACTTGGGGATTCCCGTCGTGATTATTCTGGAAATTTGAGGATTTCAGATAGAAATGAAGAAGAAGATAGAGAAGGGAAAACCTCATTTACTTCTAGAGACACTCTTGAGGGGCAGTTAAACAAGATGCAGACAGATATTGAGATGGCTGAGCACCACAAACACCAAGCTGAGGTCTACCTGGACGAGAAAATTCAAGAAGTGGATAGTTTGACTTCTAGAATTCAGGAGCTAGAATCTCAATTATATAAAGAGAGGCAGGAGTGTAGAAGGATCAAATCAAAAATCAAGAAGTTTGTCAAAGCACATAATCGTTACTCAAGGTTACAAGATGAACTGAAACGGCAAGTATACTTATCGCAAGTCCGACTTCAACAATTGGGAGATCAGCTGGGACCAGATGTTAATAAAATTGGTGCCAATGAAGAAGACTCAAGTATCAATATTGTGAGCGATGGAGAGGACCCTGGTTATCATGCGTCAGGCCCTTTTCATGACCTGCAAAAAGACACTTCTGCAAGCAAGAGGAAGATGCATGCTGTTCAAGATACTGCAGAGAACTCAAATCGAGCTGATTTAAACAAAGGAAATAAAGAGGCAGTGGTGAGAAGGATCTCTCGGTGGAATGCCCATCCTGCTAAATCAGTATATAGCAAAATTGAGGCGGTTGGCAATGAAGTCAATGATCTGATACCTACAGCAAATGAAAGCAGGCAGAAGAGGGGAAGGACATCTAGTAGTGTTTCTACTGCGGACAAGGTTAGGGGTCTAGAGTCAGGTGTTGTAGTGCCATTAACCAGCATGGCTGCCCATGCAGTTGATGAGGAAGTTGATATTGACTTGGAAATCAACAATGAAGTGAAAGAACCGAGGGAAAGTACTAAGGAGGCTGCGTCAGGCAGCCTGCCTTTCCTTCCCCCTCCACCACCTCCTCCAATCCGTGAATTCAACCATTCAAGGTATGAGGGTGAAGATCAAAATGTAGATGTGGAGGTGGTTGATGATGAAAGGGAAGGTATGGACGATGCTTAAGATTAGATCCTGCTGTAGAGGTTAGAACAACTCTTAGTATAGTGAAAGTGGATTATTGGTTTTTATGGGTTCTTGTTAAATACACTTGTAATTTCCAGTTTTGTTAGCATATGAGATATCGACGACCTTCCCCCATTCTGTTCTTTCTTGGCATATTTTGATTGCTATTTCCGAGTTACCTTGGTGAAGCAAATCAATGCACTAGTTCACTTGTTAGTTAATTGTGGGTCGTCAGCTGAGGATTATATATATGTTTTGAAACCTG

Coding sequence (CDS)

ATGATGGTTGGCCGCAAACTCTTCAAAACAAAGTTATGTGTTCTTTATCAGAAAGGCCACTGTTCTCGCCCAAGTTGCTCCTTTGCTCACGGGAACGCTGAACTCAGACGATTTGCTGGTGCTTCTACCGGAGAGGTTCTTCTTTGGCTTATGCCTCCTGAGTATGCCAAATGGACTTCCTCTTGGAAGTTATCTCCCTTTTGGATCAAAGTTATGCAAACTTCTTGTTCATCGTGGACACAGGAGTGTAATCCTTCGTTCTATTCTCAATATGAAGGTAGACAGGAATATAGAGGAAATGATTTAAGGCATAAGCTTGACAGCAGACATTCTCCCCTGCAGGAAAGGGATTCTAGAGGGCAACATGGACCTCGTGTTCAAGCAAAGGAAGGGTGGGAAGTGATTCCAGGATGGAATTATCTATCGAGGGATAAATTTTTATCTGAAGCCCTTGCGAATGACCGTAAGAGGAGGAAAAAGGAACTTGGGGATTCCCGTCGTGATTATTCTGGAAATTTGAGGATTTCAGATAGAAATGAAGAAGAAGATAGAGAAGGGAAAACCTCATTTACTTCTAGAGACACTCTTGAGGGGCAGTTAAACAAGATGCAGACAGATATTGAGATGGCTGAGCACCACAAACACCAAGCTGAGGTCTACCTGGACGAGAAAATTCAAGAAGTGGATAGTTTGACTTCTAGAATTCAGGAGCTAGAATCTCAATTATATAAAGAGAGGCAGGAGTGTAGAAGGATCAAATCAAAAATCAAGAAGTTTGTCAAAGCACATAATCGTTACTCAAGGTTACAAGATGAACTGAAACGGCAAGTATACTTATCGCAAGTCCGACTTCAACAATTGGGAGATCAGCTGGGACCAGATGTTAATAAAATTGGTGCCAATGAAGAAGACTCAAGTATCAATATTGTGAGCGATGGAGAGGACCCTGGTTATCATGCGTCAGGCCCTTTTCATGACCTGCAAAAAGACACTTCTGCAAGCAAGAGGAAGATGCATGCTGTTCAAGATACTGCAGAGAACTCAAATCGAGCTGATTTAAACAAAGGAAATAAAGAGGCAGTGGTGAGAAGGATCTCTCGGTGGAATGCCCATCCTGCTAAATCAGTATATAGCAAAATTGAGGCGGTTGGCAATGAAGTCAATGATCTGATACCTACAGCAAATGAAAGCAGGCAGAAGAGGGGAAGGACATCTAGTAGTGTTTCTACTGCGGACAAGGTTAGGGGTCTAGAGTCAGGTGTTGTAGTGCCATTAACCAGCATGGCTGCCCATGCAGTTGATGAGGAAGTTGATATTGACTTGGAAATCAACAATGAAGTGAAAGAACCGAGGGAAAGTACTAAGGAGGCTGCGTCAGGCAGCCTGCCTTTCCTTCCCCCTCCACCACCTCCTCCAATCCGTGAATTCAACCATTCAAGGTATGAGGGTGAAGATCAAAATGTAGATGTGGAGGTGGTTGATGATGAAAGGGAAGGTATGGACGATGCTTAA

Protein sequence

MMVGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFAGASTGEVLLWLMPPEYAKWTSSWKLSPFWIKVMQTSCSSWTQECNPSFYSQYEGRQEYRGNDLRHKLDSRHSPLQERDSRGQHGPRVQAKEGWEVIPGWNYLSRDKFLSEALANDRKRRKKELGDSRRDYSGNLRISDRNEEEDREGKTSFTSRDTLEGQLNKMQTDIEMAEHHKHQAEVYLDEKIQEVDSLTSRIQELESQLYKERQECRRIKSKIKKFVKAHNRYSRLQDELKRQVYLSQVRLQQLGDQLGPDVNKIGANEEDSSINIVSDGEDPGYHASGPFHDLQKDTSASKRKMHAVQDTAENSNRADLNKGNKEAVVRRISRWNAHPAKSVYSKIEAVGNEVNDLIPTANESRQKRGRTSSSVSTADKVRGLESGVVVPLTSMAAHAVDEEVDIDLEINNEVKEPRESTKEAASGSLPFLPPPPPPPIREFNHSRYEGEDQNVDVEVVDDEREGMDDA

Homology

[Close]

BLAST of CcUC02G018990.1 vs. NCBI nr
Match: XP_038887776.1 (zinc finger CCCH domain-containing protein 40 isoform X1 [Benincasa hispida])

HSP 1 Score: 708.0 bits (1826), Expect = 5.9e-200
Identity = 394/505 (78.02%), Postives = 409/505 (80.99%), Query Frame = 0


Query: 1   MMVGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFAGASTGEVLLWLMPPEYAKWTS 60
           MMVGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFAGAST                 
Sbjct: 1   MMVGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFAGAST----------------- 60

Query: 61  SWKLSPFWIKVMQTSCSSWTQECNPSFYSQYEGRQEYRGNDLRHKLDSRHSPLQERDSRG 120
                                           GRQ+YRGNDLR KLDSRHSPLQERDSRG
Sbjct: 61  --------------------------------GRQDYRGNDLRLKLDSRHSPLQERDSRG 120

Query: 121 QHGPRVQAKEGWEVIPGWNYLSRDKFLSEALANDRKRRKKELGDSRRDYSGNLRISDRNE 180
           +H PR +    W +                  +DRKRRKKE GDS  DYSGNLRISDRNE
Sbjct: 121 RHEPR-EYSSSWSI---------------ERHSDRKRRKKEHGDSHHDYSGNLRISDRNE 180

Query: 181 EEDREGKTSFTSRDTLEGQLNKMQTDIEMAEHHKHQAEVYLDEKIQEVDSLTSRIQELES 240
           E+DR+GK S  SRDTLEGQLNKMQ+DI+MAEHHKHQAEVYLDEKIQEVD LTSRIQELES
Sbjct: 181 EQDRQGKISSASRDTLEGQLNKMQSDIDMAEHHKHQAEVYLDEKIQEVDILTSRIQELES 240

Query: 241 QLYKERQECRRIKSKIKKFVKAHNRYSRLQDELKRQVYLSQVRLQQLGDQLGPDVNKIGA 300
           QLYKERQECRRIKSKIKKFVKAHNR+SRLQDELKR    SQVRLQQLGDQLGPDVNKIGA
Sbjct: 241 QLYKERQECRRIKSKIKKFVKAHNRHSRLQDELKR----SQVRLQQLGDQLGPDVNKIGA 300

Query: 301 NEEDSSINIVSDGEDPGYHASGPFHDLQKDTSASKRKMHAVQDTAENSNRADLNKGNKEA 360
           NEEDSSINIVSDGEDP YHASGPFHDLQKDTSASKRKMH+VQDTAENS RADLNKGNKEA
Sbjct: 301 NEEDSSINIVSDGEDPVYHASGPFHDLQKDTSASKRKMHSVQDTAENSKRADLNKGNKEA 360

Query: 361 VVR--RISRWNAHPAKSVYSKIEAVGNEVNDLIPTANESRQKRGRTSSSVSTADKVRGLE 420
           V R  RISRWNAHPAKS+YSKIEAVGNE+NDLIPTANESRQKRG+TSSSVS ADKVRGLE
Sbjct: 361 VGRLSRISRWNAHPAKSMYSKIEAVGNEINDLIPTANESRQKRGKTSSSVSAADKVRGLE 420

Query: 421 SGVVVPLTSMAAHAVDEEVDIDLEINNEVKEPRESTKEAASGSLPFLPPPPPPPIREFNH 480
           SGVVVPLTSMAAHAVDEEVDIDLEI+NEVKEPRESTKEAASGSLPFLPPPPPPPI EFNH
Sbjct: 421 SGVVVPLTSMAAHAVDEEVDIDLEISNEVKEPRESTKEAASGSLPFLPPPPPPPIHEFNH 436

Query: 481 SRYEGEDQNVDVEVVDDEREGMDDA 504
           SRYE EDQNVDVEVVDDE E MDDA
Sbjct: 481 SRYESEDQNVDVEVVDDETEVMDDA 436

[Close]

BLAST of CcUC02G018990.1 vs. NCBI nr
Match: XP_038887777.1 (zinc finger CCCH domain-containing protein 40 isoform X2 [Benincasa hispida])

HSP 1 Score: 706.8 bits (1823), Expect = 1.3e-199
Identity = 394/505 (78.02%), Postives = 408/505 (80.79%), Query Frame = 0


Query: 1   MMVGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFAGASTGEVLLWLMPPEYAKWTS 60
           MMVGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFAGAST                 
Sbjct: 1   MMVGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFAGAST----------------- 60

Query: 61  SWKLSPFWIKVMQTSCSSWTQECNPSFYSQYEGRQEYRGNDLRHKLDSRHSPLQERDSRG 120
                                           GRQ+YRGNDLR KLDSRHSPLQERDSRG
Sbjct: 61  --------------------------------GRQDYRGNDLRLKLDSRHSPLQERDSRG 120

Query: 121 QHGPRVQAKEGWEVIPGWNYLSRDKFLSEALANDRKRRKKELGDSRRDYSGNLRISDRNE 180
           +H P  Q    W +                  +DRKRRKKE GDS  DYSGNLRISDRNE
Sbjct: 121 RHEP--QYSSSWSI---------------ERHSDRKRRKKEHGDSHHDYSGNLRISDRNE 180

Query: 181 EEDREGKTSFTSRDTLEGQLNKMQTDIEMAEHHKHQAEVYLDEKIQEVDSLTSRIQELES 240
           E+DR+GK S  SRDTLEGQLNKMQ+DI+MAEHHKHQAEVYLDEKIQEVD LTSRIQELES
Sbjct: 181 EQDRQGKISSASRDTLEGQLNKMQSDIDMAEHHKHQAEVYLDEKIQEVDILTSRIQELES 240

Query: 241 QLYKERQECRRIKSKIKKFVKAHNRYSRLQDELKRQVYLSQVRLQQLGDQLGPDVNKIGA 300
           QLYKERQECRRIKSKIKKFVKAHNR+SRLQDELKR    SQVRLQQLGDQLGPDVNKIGA
Sbjct: 241 QLYKERQECRRIKSKIKKFVKAHNRHSRLQDELKR----SQVRLQQLGDQLGPDVNKIGA 300

Query: 301 NEEDSSINIVSDGEDPGYHASGPFHDLQKDTSASKRKMHAVQDTAENSNRADLNKGNKEA 360
           NEEDSSINIVSDGEDP YHASGPFHDLQKDTSASKRKMH+VQDTAENS RADLNKGNKEA
Sbjct: 301 NEEDSSINIVSDGEDPVYHASGPFHDLQKDTSASKRKMHSVQDTAENSKRADLNKGNKEA 360

Query: 361 VVR--RISRWNAHPAKSVYSKIEAVGNEVNDLIPTANESRQKRGRTSSSVSTADKVRGLE 420
           V R  RISRWNAHPAKS+YSKIEAVGNE+NDLIPTANESRQKRG+TSSSVS ADKVRGLE
Sbjct: 361 VGRLSRISRWNAHPAKSMYSKIEAVGNEINDLIPTANESRQKRGKTSSSVSAADKVRGLE 420

Query: 421 SGVVVPLTSMAAHAVDEEVDIDLEINNEVKEPRESTKEAASGSLPFLPPPPPPPIREFNH 480
           SGVVVPLTSMAAHAVDEEVDIDLEI+NEVKEPRESTKEAASGSLPFLPPPPPPPI EFNH
Sbjct: 421 SGVVVPLTSMAAHAVDEEVDIDLEISNEVKEPRESTKEAASGSLPFLPPPPPPPIHEFNH 435

Query: 481 SRYEGEDQNVDVEVVDDEREGMDDA 504
           SRYE EDQNVDVEVVDDE E MDDA
Sbjct: 481 SRYESEDQNVDVEVVDDETEVMDDA 435

[Close]

BLAST of CcUC02G018990.1 vs. NCBI nr
Match: XP_008455411.1 (PREDICTED: zinc finger CCCH domain-containing protein 40 isoform X1 [Cucumis melo])

HSP 1 Score: 674.5 bits (1739), Expect = 7.2e-190
Identity = 379/505 (75.05%), Postives = 399/505 (79.01%), Query Frame = 0


Query: 1   MMVGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFAGASTGEVLLWLMPPEYAKWTS 60
           MMVGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFA AS                  
Sbjct: 1   MMVGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFAAASI----------------- 60

Query: 61  SWKLSPFWIKVMQTSCSSWTQECNPSFYSQYEGRQEYRGNDLRHKLDSRHSPLQERDSRG 120
                                           GR EYRGNDLRHKLDSRHSP QERDSRG
Sbjct: 61  --------------------------------GRTEYRGNDLRHKLDSRHSPQQERDSRG 120

Query: 121 QHGPRVQAKEGWEVIPGWNYLSRDKFLSEALANDRKRRKKELGDSRRDYSGNLRISDRNE 180
           +H PR       E    W+ L R         +DRKRRKKE GD+ RDYSGNLRISDRNE
Sbjct: 121 RHVPR-------EYSSSWS-LERH--------SDRKRRKKEHGDACRDYSGNLRISDRNE 180

Query: 181 EEDREGKTSFTSRDTLEGQLNKMQTDIEMAEHHKHQAEVYLDEKIQEVDSLTSRIQELES 240
           E DR+GK S  SRDTLEGQLNKMQTDIEMAE  KHQAEVYLDEKIQEVDSL SR+QELES
Sbjct: 181 EHDRQGKISSVSRDTLEGQLNKMQTDIEMAEQRKHQAEVYLDEKIQEVDSLASRVQELES 240

Query: 241 QLYKERQECRRIKSKIKKFVKAHNRYSRLQDELKRQVYLSQVRLQQLGDQLGPDVNKIGA 300
           QLY ERQECRRIKSKIKKFVKAHNR+SRLQDEL R    SQVRLQQLGDQLG DVNKIGA
Sbjct: 241 QLYNERQECRRIKSKIKKFVKAHNRHSRLQDELNR----SQVRLQQLGDQLGSDVNKIGA 300

Query: 301 NEEDSSINIVSDGEDPGYHASGPFHDLQKDTSASKRKMHAVQDTAENSNRADLNKGNKEA 360
           NEEDSSINIVSDG++PGYHAS PFH LQ+DTSASKRKMHAVQD AENS RADLNKGNKEA
Sbjct: 301 NEEDSSINIVSDGDEPGYHASDPFHGLQRDTSASKRKMHAVQDIAENSKRADLNKGNKEA 360

Query: 361 V--VRRISRWNAHPAKSVYSKIEAVGNEVNDLIPTANESRQKRGRTSSSVSTADKVRGLE 420
           V  +RR SRWNAHPAKS YSKIE VGNE+NDLIPTANESRQ+RGRTSSSVS+ADKVRGL+
Sbjct: 361 VGRLRRNSRWNAHPAKSTYSKIEMVGNEINDLIPTANESRQRRGRTSSSVSSADKVRGLD 420

Query: 421 SGVVVPLTSMAAHAVDEEVDIDLEINNEVKEPRESTKEAASGSLPFLPPPPPPPIREFNH 480
           SGV VPLTSMA HAVDEEVDIDLEIN+E KEPRES+ EAASGSLPFLPPPPPPPIREF+H
Sbjct: 421 SGVAVPLTSMAGHAVDEEVDIDLEINHEEKEPRESSMEAASGSLPFLPPPPPPPIREFSH 436

Query: 481 SRYEGEDQNVDVEVVDDEREGMDDA 504
           S+YEGEDQNVDVEVVDDE+E MDDA
Sbjct: 481 SKYEGEDQNVDVEVVDDEKEYMDDA 436

[Close]

BLAST of CcUC02G018990.1 vs. NCBI nr
Match: XP_008455412.1 (PREDICTED: zinc finger CCCH domain-containing protein 40 isoform X2 [Cucumis melo])

HSP 1 Score: 671.8 bits (1732), Expect = 4.7e-189
Identity = 378/505 (74.85%), Postives = 397/505 (78.61%), Query Frame = 0


Query: 1   MMVGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFAGASTGEVLLWLMPPEYAKWTS 60
           MMVGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFA AS                  
Sbjct: 1   MMVGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFAAASI----------------- 60

Query: 61  SWKLSPFWIKVMQTSCSSWTQECNPSFYSQYEGRQEYRGNDLRHKLDSRHSPLQERDSRG 120
                                           GR EYRGNDLRHKLDSRHSP QERDSRG
Sbjct: 61  --------------------------------GRTEYRGNDLRHKLDSRHSPQQERDSRG 120

Query: 121 QHGPRVQAKEGWEVIPGWNYLSRDKFLSEALANDRKRRKKELGDSRRDYSGNLRISDRNE 180
           +H P  Q    W        L R         +DRKRRKKE GD+ RDYSGNLRISDRNE
Sbjct: 121 RHVP--QYSSSWS-------LERH--------SDRKRRKKEHGDACRDYSGNLRISDRNE 180

Query: 181 EEDREGKTSFTSRDTLEGQLNKMQTDIEMAEHHKHQAEVYLDEKIQEVDSLTSRIQELES 240
           E DR+GK S  SRDTLEGQLNKMQTDIEMAE  KHQAEVYLDEKIQEVDSL SR+QELES
Sbjct: 181 EHDRQGKISSVSRDTLEGQLNKMQTDIEMAEQRKHQAEVYLDEKIQEVDSLASRVQELES 240

Query: 241 QLYKERQECRRIKSKIKKFVKAHNRYSRLQDELKRQVYLSQVRLQQLGDQLGPDVNKIGA 300
           QLY ERQECRRIKSKIKKFVKAHNR+SRLQDEL R    SQVRLQQLGDQLG DVNKIGA
Sbjct: 241 QLYNERQECRRIKSKIKKFVKAHNRHSRLQDELNR----SQVRLQQLGDQLGSDVNKIGA 300

Query: 301 NEEDSSINIVSDGEDPGYHASGPFHDLQKDTSASKRKMHAVQDTAENSNRADLNKGNKEA 360
           NEEDSSINIVSDG++PGYHAS PFH LQ+DTSASKRKMHAVQD AENS RADLNKGNKEA
Sbjct: 301 NEEDSSINIVSDGDEPGYHASDPFHGLQRDTSASKRKMHAVQDIAENSKRADLNKGNKEA 360

Query: 361 V--VRRISRWNAHPAKSVYSKIEAVGNEVNDLIPTANESRQKRGRTSSSVSTADKVRGLE 420
           V  +RR SRWNAHPAKS YSKIE VGNE+NDLIPTANESRQ+RGRTSSSVS+ADKVRGL+
Sbjct: 361 VGRLRRNSRWNAHPAKSTYSKIEMVGNEINDLIPTANESRQRRGRTSSSVSSADKVRGLD 420

Query: 421 SGVVVPLTSMAAHAVDEEVDIDLEINNEVKEPRESTKEAASGSLPFLPPPPPPPIREFNH 480
           SGV VPLTSMA HAVDEEVDIDLEIN+E KEPRES+ EAASGSLPFLPPPPPPPIREF+H
Sbjct: 421 SGVAVPLTSMAGHAVDEEVDIDLEINHEEKEPRESSMEAASGSLPFLPPPPPPPIREFSH 435

Query: 481 SRYEGEDQNVDVEVVDDEREGMDDA 504
           S+YEGEDQNVDVEVVDDE+E MDDA
Sbjct: 481 SKYEGEDQNVDVEVVDDEKEYMDDA 435

[Close]

BLAST of CcUC02G018990.1 vs. NCBI nr
Match: XP_004144583.2 (zinc finger CCCH domain-containing protein 40 isoform X1 [Cucumis sativus])

HSP 1 Score: 665.6 bits (1716), Expect = 3.3e-187
Identity = 373/505 (73.86%), Postives = 399/505 (79.01%), Query Frame = 0


Query: 1   MMVGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFAGASTGEVLLWLMPPEYAKWTS 60
           MMVGRKLFKTKLCVLYQKG+CSRPSCSFAHGNAELRRFA  S                  
Sbjct: 1   MMVGRKLFKTKLCVLYQKGYCSRPSCSFAHGNAELRRFAAPSI----------------- 60

Query: 61  SWKLSPFWIKVMQTSCSSWTQECNPSFYSQYEGRQEYRGNDLRHKLDSRHSPLQERDSRG 120
                                           GR EYRGNDLRHKLDSRHSPLQERDSRG
Sbjct: 61  --------------------------------GRTEYRGNDLRHKLDSRHSPLQERDSRG 120

Query: 121 QHGPRVQAKEGWEVIPGWNYLSRDKFLSEALANDRKRRKKELGDSRRDYSGNLRISDRNE 180
           +H PR       E    W+ L R         +DRKRRKKE GD+ RDYSGNLRI DRNE
Sbjct: 121 RHVPR-------EYSSSWS-LERH--------SDRKRRKKEHGDASRDYSGNLRILDRNE 180

Query: 181 EEDREGKTSFTSRDTLEGQLNKMQTDIEMAEHHKHQAEVYLDEKIQEVDSLTSRIQELES 240
           E DR+GK S  SRDTLEGQLNK+QTDIEMAE  KHQAEVY+DEKIQEVDSLTSR+QELES
Sbjct: 181 EHDRQGKISSVSRDTLEGQLNKIQTDIEMAEQRKHQAEVYMDEKIQEVDSLTSRVQELES 240

Query: 241 QLYKERQECRRIKSKIKKFVKAHNRYSRLQDELKRQVYLSQVRLQQLGDQLGPDVNKIGA 300
           QLYKERQECRRIKSKIKKFVKAHNR+SRLQDEL R    SQVRLQQLGDQLG DVNKIGA
Sbjct: 241 QLYKERQECRRIKSKIKKFVKAHNRHSRLQDELSR----SQVRLQQLGDQLGSDVNKIGA 300

Query: 301 NEEDSSINIVSDGEDPGYHASGPFHDLQKDTSASKRKMHAVQDTAENSNRADLNKGNKEA 360
           NEEDSSINIVSDGEDPGYHAS PFHDLQ+DTSASKRKMH VQD AEN  RADL+KGNKEA
Sbjct: 301 NEEDSSINIVSDGEDPGYHASDPFHDLQRDTSASKRKMHDVQDIAENLKRADLDKGNKEA 360

Query: 361 V--VRRISRWNAHPAKSVYSKIEAVGNEVNDLIPTANESRQKRGRTSSSVSTADKVRGLE 420
           V  +RR SRWNAHPAKS YSKI+ VGNE+NDLIPTANESRQ+RGRTSSSVS+ADKVRGL+
Sbjct: 361 VGRLRRNSRWNAHPAKSTYSKIKMVGNEINDLIPTANESRQRRGRTSSSVSSADKVRGLD 420

Query: 421 SGVVVPLTSMAAHAVDEEVDIDLEINNEVKEPRESTKEAASGSLPFLPPPPPPPIREFNH 480
           SGV VPLTSMA HAVDEEVDIDLEIN+E KEPRE++ EAASGSLPFLPPPPPPPIREF+H
Sbjct: 421 SGVAVPLTSMAGHAVDEEVDIDLEINHEEKEPRENSMEAASGSLPFLPPPPPPPIREFSH 436

Query: 481 SRYEGEDQNVDVEVVDDEREGMDDA 504
           S+YEGEDQNVDVEVVD+E+E MD+A
Sbjct: 481 SKYEGEDQNVDVEVVDEEKEYMDEA 436

[Close]

BLAST of CcUC02G018990.1 vs. ExPASy Swiss-Prot
Match: Q93XW7 (Zinc finger CCCH domain-containing protein 40 OS=Arabidopsis thaliana OX=3702 GN=At3g21810 PE=1 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 1.3e-45
Identity = 178/512 (34.77%), Postives = 249/512 (48.63%), Query Frame = 0


Query: 2   MVGRKLFKTKLCVLYQK-GHCSRPSCSFAHGNAELRRFAGASTGEVLLWLMPPEYAKWTS 61
           M G  ++KTKLC+L+ K G CSRP+C+FAHGNAELRR              P E      
Sbjct: 1   MSGSSMYKTKLCILFNKTGDCSRPNCTFAHGNAELRR--------------PGE------ 60

Query: 62  SWKLSPFWIKVMQTSCSSWTQECNPSFYSQYEGRQEYRGNDLRHKLDSRHSPLQERDSRG 121
                           SS+T     +  S    R+    +DLR +L  + SP + R S  
Sbjct: 61  ----------------SSFTGR-RHNMDSDLRDRRHNMDSDLRDRLGRQFSP-ERRPSLD 120

Query: 122 QHGPRVQAKEGWEVIPGWNYLSRDKFLSEALANDRKRRKKELGDSRRDYSGNLRISDRNE 181
           + G RVQ   G            D  +      D+  R+    D RRDY+G L++ +R E
Sbjct: 121 RSGRRVQRFSG-----------HDNSMPFENRRDKDYRENRRFDERRDYAGGLKVGNRIE 180

Query: 182 EEDREGKTSFTS-RDTLEGQLNKMQTDIEMAEHHKHQAEVYLDEKIQEVDSLTSRIQELE 241
           +   +G+  F    + LE QL  ++ D++M    K + E  ++ K  EVD LTSRIQELE
Sbjct: 181 DRAEDGRNKFHGYNNVLEEQLKDVEMDVKMLTDDKLRLEASVERKAHEVDILTSRIQELE 240

Query: 242 SQLYKERQECRRIKSKIKKFVKAHNRYSRLQDELKRQVYLSQVRLQQLGDQLGPDVNKIG 301
           +QL +E+ ECRRI S  KKFVK +NR+ R QD+LKR    S+ RLQ+LG+QL   +    
Sbjct: 241 TQLDREKDECRRITSSSKKFVKEYNRFLRAQDDLKR----SEARLQKLGNQLSTYLAGSE 300

Query: 302 ANEEDSSINIVSDGEDPGYH---ASGPFHDLQKDTSASKRKMHAVQ-DTAENSNRADLNK 361
            N  D  ++IVSD E  G +   A  P ++LQ  +S S++K +  Q  T E      + +
Sbjct: 301 GNNRDVGLDIVSDEETNGRNLRTACDPHNELQNTSSLSRKKHYVDQYTTKEPVEDGLIGR 360

Query: 362 GNKEAVVRRISR---WNAHPAKSVYSKIEAVGNEVNDLI--PTANESRQKRGRTSSSVST 421
           G +E V     R   WN   +KS YS+ E+      D I   ++ E   KR R S   S 
Sbjct: 361 GEEEKVENEKKRPPCWNMLSSKS-YSEEESGAWNDEDTINRSSSKEDNWKRRRFSIGTSA 420

Query: 422 ADKVRGLESGVVVPLTSMAAHAVDEEVDIDLEINNEVKEPRESTKEAASGSLPFLPPPPP 481
            DK        V+  TSMAA   D           +V E  E   EAA+GS P +  PPP
Sbjct: 421 TDK--------VILSTSMAAREFD-----------DVAESEEENPEAANGS-PLISLPPP 434

Query: 482 PPIREFNHSRYEGEDQNVDVEVVDDEREGMDD 503
           PP R+  H + + +D N DV    ++++  DD
Sbjct: 481 PPFRD-AHVQRDEDDVNGDVM---EQKKAYDD 434

[Close]

BLAST of CcUC02G018990.1 vs. ExPASy Swiss-Prot
Match: Q6H7U2 (Zinc finger CCCH domain-containing protein 13 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0161200 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 2.6e-41
Identity = 151/497 (30.38%), Postives = 244/497 (49.09%), Query Frame = 0


Query: 8   FKTKLCVLYQKGHCSRPSCSFAHGNAELRRFAGASTGEVLLWLMPPEYAKWTSSWKLSPF 67
           +KTKLC L+Q+G+C+R +CSFAHG+ ++RR              PP              
Sbjct: 11  YKTKLCALWQRGNCNRDTCSFAHGHGDIRR--------------PPS------------- 70

Query: 68  WIKVMQTSCSSWTQECNPSFYSQYEGRQEYRGNDLRHKLDSRHSPLQE----RDSRGQHG 127
                           +   ++ + GR++YR  D R ++D R SP +     R+SRG H 
Sbjct: 71  ----------------SRGAFTHHPGRRDYRAGDFRGRIDRRFSPRRRHSPGRESRG-HR 130

Query: 128 PRVQAKEGWEVIPGWNYLSRDKFLSEALANDRK---RRKKELGDSRRDYSGNLRISDRNE 187
           P    +            SR++  S + +  RK   R +K+  D   + S +L +SD N+
Sbjct: 131 PLYDRRPS----------SRERDSSYSRSPSRKSERRHEKKTDDGETNSSRSLSLSDNND 190

Query: 188 EEDREGKTSFTSRDTLEGQLNKMQTDIEMAEHHKHQAEVYLDEKIQEVDSLTSRIQELES 247
           E+ ++  +S   ++  E QL +++ D+E     K Q EV LDEKI EV  ++S++ +LE 
Sbjct: 191 EKKKDKFSSGDEKEDHEKQLKQIRLDMEALRDDKTQMEVILDEKIDEVRKISSKVNDLEV 250

Query: 248 QLYKERQECRRIKSKIKKFVKAHNRYSRLQDELKRQVYLSQVRLQQLGDQLGPDVNKIGA 307
           QL +E+ EC R+ SK+KKF+KAH R+ + Q+E+KR    SQ R ++LGD L  D+ K GA
Sbjct: 251 QLRREKDECHRMTSKMKKFIKAHARFLKAQEEVKR----SQARFERLGDLLASDILKRGA 310

Query: 308 NEEDSSINIVSDGEDPGYHASGPF---HDLQKDTSASKRKMHAVQDTAENSN--RADLNK 367
           NEE SS+N   +   P   A+      +   ++  A K++     DT   S+  R+D+  
Sbjct: 311 NEEGSSVNEDLNERSPNTAATKKRSIPYSTSEEAKAVKKRRERDSDTMTRSDKYRSDVTD 370

Query: 368 GNKEAVVRRISRWNAHPAKSVYSKIEAVGNEVNDLIPTANESRQKRGRTSSSVSTADKVR 427
            +K +             KS+Y K +   +E              + +  +++ T +KV+
Sbjct: 371 FDKTSK-------GTEATKSLYLKKKLWEDE--------------KSKLGANIFT-EKVK 426

Query: 428 GLESGVVVPLTSMAAHAVDE-EVDIDLEINNEVKEPRESTKEAASGSLPFLPPPPPPPIR 487
           G     V+P T MAAHA+D+    I+LE  +E  +             P +P  PPP ++
Sbjct: 431 GSPVRHVLPSTGMAAHAIDDLNEAIELEDRHESIDALLENDADDKTRSPAIPLQPPPVVQ 426

Query: 488 EFNHSRYEGEDQNVDVE 492
              + +YEG+D+ VDVE
Sbjct: 491 N-AYEQYEGDDEEVDVE 426

[Close]

BLAST of CcUC02G018990.1 vs. ExPASy TrEMBL
Match: A0A1S3C0E8 (zinc finger CCCH domain-containing protein 40 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495581 PE=4 SV=1)

HSP 1 Score: 674.5 bits (1739), Expect = 3.5e-190
Identity = 379/505 (75.05%), Postives = 399/505 (79.01%), Query Frame = 0


Query: 1   MMVGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFAGASTGEVLLWLMPPEYAKWTS 60
           MMVGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFA AS                  
Sbjct: 1   MMVGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFAAASI----------------- 60

Query: 61  SWKLSPFWIKVMQTSCSSWTQECNPSFYSQYEGRQEYRGNDLRHKLDSRHSPLQERDSRG 120
                                           GR EYRGNDLRHKLDSRHSP QERDSRG
Sbjct: 61  --------------------------------GRTEYRGNDLRHKLDSRHSPQQERDSRG 120

Query: 121 QHGPRVQAKEGWEVIPGWNYLSRDKFLSEALANDRKRRKKELGDSRRDYSGNLRISDRNE 180
           +H PR       E    W+ L R         +DRKRRKKE GD+ RDYSGNLRISDRNE
Sbjct: 121 RHVPR-------EYSSSWS-LERH--------SDRKRRKKEHGDACRDYSGNLRISDRNE 180

Query: 181 EEDREGKTSFTSRDTLEGQLNKMQTDIEMAEHHKHQAEVYLDEKIQEVDSLTSRIQELES 240
           E DR+GK S  SRDTLEGQLNKMQTDIEMAE  KHQAEVYLDEKIQEVDSL SR+QELES
Sbjct: 181 EHDRQGKISSVSRDTLEGQLNKMQTDIEMAEQRKHQAEVYLDEKIQEVDSLASRVQELES 240

Query: 241 QLYKERQECRRIKSKIKKFVKAHNRYSRLQDELKRQVYLSQVRLQQLGDQLGPDVNKIGA 300
           QLY ERQECRRIKSKIKKFVKAHNR+SRLQDEL R    SQVRLQQLGDQLG DVNKIGA
Sbjct: 241 QLYNERQECRRIKSKIKKFVKAHNRHSRLQDELNR----SQVRLQQLGDQLGSDVNKIGA 300

Query: 301 NEEDSSINIVSDGEDPGYHASGPFHDLQKDTSASKRKMHAVQDTAENSNRADLNKGNKEA 360
           NEEDSSINIVSDG++PGYHAS PFH LQ+DTSASKRKMHAVQD AENS RADLNKGNKEA
Sbjct: 301 NEEDSSINIVSDGDEPGYHASDPFHGLQRDTSASKRKMHAVQDIAENSKRADLNKGNKEA 360

Query: 361 V--VRRISRWNAHPAKSVYSKIEAVGNEVNDLIPTANESRQKRGRTSSSVSTADKVRGLE 420
           V  +RR SRWNAHPAKS YSKIE VGNE+NDLIPTANESRQ+RGRTSSSVS+ADKVRGL+
Sbjct: 361 VGRLRRNSRWNAHPAKSTYSKIEMVGNEINDLIPTANESRQRRGRTSSSVSSADKVRGLD 420

Query: 421 SGVVVPLTSMAAHAVDEEVDIDLEINNEVKEPRESTKEAASGSLPFLPPPPPPPIREFNH 480
           SGV VPLTSMA HAVDEEVDIDLEIN+E KEPRES+ EAASGSLPFLPPPPPPPIREF+H
Sbjct: 421 SGVAVPLTSMAGHAVDEEVDIDLEINHEEKEPRESSMEAASGSLPFLPPPPPPPIREFSH 436

Query: 481 SRYEGEDQNVDVEVVDDEREGMDDA 504
           S+YEGEDQNVDVEVVDDE+E MDDA
Sbjct: 481 SKYEGEDQNVDVEVVDDEKEYMDDA 436

[Close]

BLAST of CcUC02G018990.1 vs. ExPASy TrEMBL
Match: A0A1S3C101 (zinc finger CCCH domain-containing protein 40 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495581 PE=4 SV=1)

HSP 1 Score: 671.8 bits (1732), Expect = 2.3e-189
Identity = 378/505 (74.85%), Postives = 397/505 (78.61%), Query Frame = 0


Query: 1   MMVGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFAGASTGEVLLWLMPPEYAKWTS 60
           MMVGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFA AS                  
Sbjct: 1   MMVGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFAAASI----------------- 60

Query: 61  SWKLSPFWIKVMQTSCSSWTQECNPSFYSQYEGRQEYRGNDLRHKLDSRHSPLQERDSRG 120
                                           GR EYRGNDLRHKLDSRHSP QERDSRG
Sbjct: 61  --------------------------------GRTEYRGNDLRHKLDSRHSPQQERDSRG 120

Query: 121 QHGPRVQAKEGWEVIPGWNYLSRDKFLSEALANDRKRRKKELGDSRRDYSGNLRISDRNE 180
           +H P  Q    W        L R         +DRKRRKKE GD+ RDYSGNLRISDRNE
Sbjct: 121 RHVP--QYSSSWS-------LERH--------SDRKRRKKEHGDACRDYSGNLRISDRNE 180

Query: 181 EEDREGKTSFTSRDTLEGQLNKMQTDIEMAEHHKHQAEVYLDEKIQEVDSLTSRIQELES 240
           E DR+GK S  SRDTLEGQLNKMQTDIEMAE  KHQAEVYLDEKIQEVDSL SR+QELES
Sbjct: 181 EHDRQGKISSVSRDTLEGQLNKMQTDIEMAEQRKHQAEVYLDEKIQEVDSLASRVQELES 240

Query: 241 QLYKERQECRRIKSKIKKFVKAHNRYSRLQDELKRQVYLSQVRLQQLGDQLGPDVNKIGA 300
           QLY ERQECRRIKSKIKKFVKAHNR+SRLQDEL R    SQVRLQQLGDQLG DVNKIGA
Sbjct: 241 QLYNERQECRRIKSKIKKFVKAHNRHSRLQDELNR----SQVRLQQLGDQLGSDVNKIGA 300

Query: 301 NEEDSSINIVSDGEDPGYHASGPFHDLQKDTSASKRKMHAVQDTAENSNRADLNKGNKEA 360
           NEEDSSINIVSDG++PGYHAS PFH LQ+DTSASKRKMHAVQD AENS RADLNKGNKEA
Sbjct: 301 NEEDSSINIVSDGDEPGYHASDPFHGLQRDTSASKRKMHAVQDIAENSKRADLNKGNKEA 360

Query: 361 V--VRRISRWNAHPAKSVYSKIEAVGNEVNDLIPTANESRQKRGRTSSSVSTADKVRGLE 420
           V  +RR SRWNAHPAKS YSKIE VGNE+NDLIPTANESRQ+RGRTSSSVS+ADKVRGL+
Sbjct: 361 VGRLRRNSRWNAHPAKSTYSKIEMVGNEINDLIPTANESRQRRGRTSSSVSSADKVRGLD 420

Query: 421 SGVVVPLTSMAAHAVDEEVDIDLEINNEVKEPRESTKEAASGSLPFLPPPPPPPIREFNH 480
           SGV VPLTSMA HAVDEEVDIDLEIN+E KEPRES+ EAASGSLPFLPPPPPPPIREF+H
Sbjct: 421 SGVAVPLTSMAGHAVDEEVDIDLEINHEEKEPRESSMEAASGSLPFLPPPPPPPIREFSH 435

Query: 481 SRYEGEDQNVDVEVVDDEREGMDDA 504
           S+YEGEDQNVDVEVVDDE+E MDDA
Sbjct: 481 SKYEGEDQNVDVEVVDDEKEYMDDA 435

[Close]

BLAST of CcUC02G018990.1 vs. ExPASy TrEMBL
Match: A0A6J1JI85 (zinc finger CCCH domain-containing protein 40-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111486025 PE=4 SV=1)

HSP 1 Score: 648.3 bits (1671), Expect = 2.7e-182
Identity = 366/505 (72.48%), Postives = 396/505 (78.42%), Query Frame = 0


Query: 1   MMVGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFAGASTGEVLLWLMPPEYAKWTS 60
           M+VG KLFKTKLCVLYQKG CSRPSCSFAHG AELRRFAGA                   
Sbjct: 1   MVVGSKLFKTKLCVLYQKGRCSRPSCSFAHGTAELRRFAGA------------------- 60

Query: 61  SWKLSPFWIKVMQTSCSSWTQECNPSFYSQYEGRQEYRGNDLRHKLDSRHSPLQERDSRG 120
                                         ++GR+EYRGNDLRHKLDSRHSPLQERDSRG
Sbjct: 61  ------------------------------HDGRREYRGNDLRHKLDSRHSPLQERDSRG 120

Query: 121 QHGPRVQAKEGWEVIPGWNYLSRDKFLSEALANDRKRRKKELGDSRRDYSGNLRISDRNE 180
           +HGPR       +    W+ L R         +DRKRRKKE GDSR DYSGNLRISDR+E
Sbjct: 121 RHGPR-------DYSSSWS-LERQ--------SDRKRRKKEYGDSRNDYSGNLRISDRSE 180

Query: 181 EEDREGKTSFTSRDTLEGQLNKMQTDIEMAEHHKHQAEVYLDEKIQEVDSLTSRIQELES 240
           E DREGK S  SRDTLEGQLNKMQ DIEMAEHHKHQAEVYLDE+IQEVDSLTSRIQELES
Sbjct: 181 ERDREGKISSASRDTLEGQLNKMQADIEMAEHHKHQAEVYLDERIQEVDSLTSRIQELES 240

Query: 241 QLYKERQECRRIKSKIKKFVKAHNRYSRLQDELKRQVYLSQVRLQQLGDQLGPDVNKIGA 300
           QLYKER++ RRIKSKIKKFVKAHNRYSR+QDELKR    SQ RLQQLGDQLG DVNKIGA
Sbjct: 241 QLYKEREDSRRIKSKIKKFVKAHNRYSRIQDELKR----SQARLQQLGDQLGSDVNKIGA 300

Query: 301 NEEDSSINIVSDGEDPGYHASGPFHDLQKDTSASKRKMHAVQDTAENSNRADLNKGNKEA 360
           NEEDSSINIVSDGEDPG+HA  P HDLQKD SASK+K H VQD AENS RADLNKG+KEA
Sbjct: 301 NEEDSSINIVSDGEDPGFHAVSPLHDLQKDNSASKKK-HVVQDIAENSKRADLNKGSKEA 360

Query: 361 V--VRRISRWNAHPAKSVYSKIEAVGNEVNDLIPTANESRQKRGRTSSSVSTADKVRGLE 420
           V  +RR SRWNAHP++SVYSKIEAVGNEVNDLIPTANES+QKRGRTS++VS+ADKVRGLE
Sbjct: 361 VGRLRRFSRWNAHPSQSVYSKIEAVGNEVNDLIPTANESKQKRGRTSTTVSSADKVRGLE 420

Query: 421 SGVVVPLTSMAAHAVDEEVDIDLEINNEVKEPRESTKEAASGSLPFLPPPPPPPIREFNH 480
           SGVVVPLTSMAAHAVDEEVDI+LEINN+V E RE+TKEA+ GSLPF PPPPPPPIRE NH
Sbjct: 421 SGVVVPLTSMAAHAVDEEVDIELEINNKVNETRENTKEASFGSLPF-PPPPPPPIREINH 434

Query: 481 SRYEGEDQNVDVEVVDDEREGMDDA 504
           SRYE EDQNVDV  +DDER  +D+A
Sbjct: 481 SRYESEDQNVDVVTLDDERARLDNA 434

[Close]

BLAST of CcUC02G018990.1 vs. ExPASy TrEMBL
Match: A0A6J1GKR3 (zinc finger CCCH domain-containing protein 13-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111454900 PE=4 SV=1)

HSP 1 Score: 641.0 bits (1652), Expect = 4.3e-180
Identity = 360/505 (71.29%), Postives = 392/505 (77.62%), Query Frame = 0


Query: 1   MMVGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFAGASTGEVLLWLMPPEYAKWTS 60
           MM+GRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFAGAS+                 
Sbjct: 1   MMIGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFAGASS----------------- 60

Query: 61  SWKLSPFWIKVMQTSCSSWTQECNPSFYSQYEGRQEYRGNDLRHKLDSRHSPLQERDSRG 120
                                           GRQEYR NDLRHKLD+RHSPLQERDSRG
Sbjct: 61  --------------------------------GRQEYRENDLRHKLDNRHSPLQERDSRG 120

Query: 121 QHGPRVQAKEGWEVIPGWNYLSRDKFLSEALANDRKRRKKELGDSRRDYSGNLRISDRNE 180
           +HGPR       E    W+ L R+        +D KRRKK+ GDSR DY+GNLRI+DR+E
Sbjct: 121 RHGPR-------EYSSSWS-LERN--------SDHKRRKKDHGDSRTDYAGNLRITDRSE 180

Query: 181 EEDREGKTSFTSRDTLEGQLNKMQTDIEMAEHHKHQAEVYLDEKIQEVDSLTSRIQELES 240
           E DREGK S +SRDTLEGQLNKMQ DIEMAEHH+HQAEVYLDEKIQEVDSLTSRIQELES
Sbjct: 181 ERDREGKISSSSRDTLEGQLNKMQADIEMAEHHRHQAEVYLDEKIQEVDSLTSRIQELES 240

Query: 241 QLYKERQECRRIKSKIKKFVKAHNRYSRLQDELKRQVYLSQVRLQQLGDQLGPDVNKIGA 300
           QLY ER+ECRRIKSKIKKFVKAHNRYS +QDELKR    SQ RLQQLGDQLG DVNKIGA
Sbjct: 241 QLYNEREECRRIKSKIKKFVKAHNRYSGIQDELKR----SQFRLQQLGDQLGSDVNKIGA 300

Query: 301 NEEDSSINIVSDGEDPGYHASGPFHDLQKDTSASKRKMHAVQDTAENSNRADLNKGNKEA 360
           NEEDSS+NIVSDGEDPGYHA+GP H L KDTSASKRK+H  QD A NS RADL+KG+KEA
Sbjct: 301 NEEDSSVNIVSDGEDPGYHAAGPLHHLHKDTSASKRKLHVDQDIAGNSKRADLHKGSKEA 360

Query: 361 V--VRRISRWNAHPAKSVYSKIEAVGNEVNDLIPTANESRQKRGRTSSSVSTADKVRGLE 420
           V  +RRISRWNAHPAKS+YSKIEAV NE ND IP ANESRQKRG+ S+SVSTADKVR L+
Sbjct: 361 VGRLRRISRWNAHPAKSMYSKIEAVRNENNDYIPKANESRQKRGKASNSVSTADKVRSLD 420

Query: 421 SGVVVPLTSMAAHAVDEEVDIDLEINNEVKEPRESTKEAASGSLPFLPPPPPPPIREFNH 480
           +GVVVPLTSMAAHAV+EEVDI+LE+NNEV + RESTKEAASGS P L PPP  PI E NH
Sbjct: 421 AGVVVPLTSMAAHAVNEEVDIELEVNNEVSDRRESTKEAASGSAPLL-PPPQSPIHEINH 435

Query: 481 SRYEGEDQNVDVEVVDDEREGMDDA 504
           SRYEGEDQN+DVEVVDDE  G+DDA
Sbjct: 481 SRYEGEDQNIDVEVVDDESAGLDDA 435

[Close]

BLAST of CcUC02G018990.1 vs. ExPASy TrEMBL
Match: A0A6J1ESE6 (zinc finger CCCH domain-containing protein 40-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111437138 PE=4 SV=1)

HSP 1 Score: 641.0 bits (1652), Expect = 4.3e-180
Identity = 363/505 (71.88%), Postives = 395/505 (78.22%), Query Frame = 0


Query: 1   MMVGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFAGASTGEVLLWLMPPEYAKWTS 60
           M+VG KLFKTKLCVLYQKG CSRPSCSFAHG AELRRFAGA                   
Sbjct: 1   MVVGSKLFKTKLCVLYQKGRCSRPSCSFAHGTAELRRFAGA------------------- 60

Query: 61  SWKLSPFWIKVMQTSCSSWTQECNPSFYSQYEGRQEYRGNDLRHKLDSRHSPLQERDSRG 120
                                         ++GR+EYRGNDLRHKLDSRHSPLQERDSRG
Sbjct: 61  ------------------------------HDGRREYRGNDLRHKLDSRHSPLQERDSRG 120

Query: 121 QHGPRVQAKEGWEVIPGWNYLSRDKFLSEALANDRKRRKKELGDSRRDYSGNLRISDRNE 180
           +HGPR       +    W+ L R         +DRKRRKKE GDSR DYSGNLRISDR+E
Sbjct: 121 RHGPR-------DYSSSWS-LERQ--------SDRKRRKKEYGDSRNDYSGNLRISDRSE 180

Query: 181 EEDREGKTSFTSRDTLEGQLNKMQTDIEMAEHHKHQAEVYLDEKIQEVDSLTSRIQELES 240
           E DREGK S  SRDTLEGQLNKMQ DIEMAEHHKHQAEVYLDE+IQEVDSLTSRIQELES
Sbjct: 181 ERDREGKISSASRDTLEGQLNKMQADIEMAEHHKHQAEVYLDERIQEVDSLTSRIQELES 240

Query: 241 QLYKERQECRRIKSKIKKFVKAHNRYSRLQDELKRQVYLSQVRLQQLGDQLGPDVNKIGA 300
           QLYKER++ RRIKSKIKKFVKAHNRYSR+QDELKR    SQVRLQQLGDQLG DVNKIGA
Sbjct: 241 QLYKEREDSRRIKSKIKKFVKAHNRYSRIQDELKR----SQVRLQQLGDQLGSDVNKIGA 300

Query: 301 NEEDSSINIVSDGEDPGYHASGPFHDLQKDTSASKRKMHAVQDTAENSNRADLNKGNKEA 360
           NEEDSSINIVSDGEDPG+HA  P HDLQKD SASK+K H VQD A NS RADLNKG+KEA
Sbjct: 301 NEEDSSINIVSDGEDPGFHAVSPLHDLQKDNSASKKK-HIVQDIAGNSKRADLNKGSKEA 360

Query: 361 V--VRRISRWNAHPAKSVYSKIEAVGNEVNDLIPTANESRQKRGRTSSSVSTADKVRGLE 420
           V  +RR SRWNAHP++SVYSKIEAVGNEVNDLIPTANES+QKRGRTS++VS+ADKVRGLE
Sbjct: 361 VGRLRRFSRWNAHPSQSVYSKIEAVGNEVNDLIPTANESKQKRGRTSTTVSSADKVRGLE 420

Query: 421 SGVVVPLTSMAAHAVDEEVDIDLEINNEVKEPRESTKEAASGSLPFLPPPPPPPIREFNH 480
           SGVVVPLTSMAAHAVDEEVDI+LEIN++V E RE+TKEA+ GSLPF  PPPPPPIRE NH
Sbjct: 421 SGVVVPLTSMAAHAVDEEVDIELEINSKVNETRENTKEASFGSLPF--PPPPPPIREINH 433

Query: 481 SRYEGEDQNVDVEVVDDEREGMDDA 504
           S+YE EDQNVDV  +DDER  +D+A
Sbjct: 481 SKYESEDQNVDVVALDDERARLDNA 433

[Close]

BLAST of CcUC02G018990.1 vs. TAIR 10
Match: AT3G21810.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 185.7 bits (470), Expect = 9.5e-47
Identity = 178/512 (34.77%), Postives = 249/512 (48.63%), Query Frame = 0


Query: 2   MVGRKLFKTKLCVLYQK-GHCSRPSCSFAHGNAELRRFAGASTGEVLLWLMPPEYAKWTS 61
           M G  ++KTKLC+L+ K G CSRP+C+FAHGNAELRR              P E      
Sbjct: 1   MSGSSMYKTKLCILFNKTGDCSRPNCTFAHGNAELRR--------------PGE------ 60

Query: 62  SWKLSPFWIKVMQTSCSSWTQECNPSFYSQYEGRQEYRGNDLRHKLDSRHSPLQERDSRG 121
                           SS+T     +  S    R+    +DLR +L  + SP + R S  
Sbjct: 61  ----------------SSFTGR-RHNMDSDLRDRRHNMDSDLRDRLGRQFSP-ERRPSLD 120

Query: 122 QHGPRVQAKEGWEVIPGWNYLSRDKFLSEALANDRKRRKKELGDSRRDYSGNLRISDRNE 181
           + G RVQ   G            D  +      D+  R+    D RRDY+G L++ +R E
Sbjct: 121 RSGRRVQRFSG-----------HDNSMPFENRRDKDYRENRRFDERRDYAGGLKVGNRIE 180

Query: 182 EEDREGKTSFTS-RDTLEGQLNKMQTDIEMAEHHKHQAEVYLDEKIQEVDSLTSRIQELE 241
           +   +G+  F    + LE QL  ++ D++M    K + E  ++ K  EVD LTSRIQELE
Sbjct: 181 DRAEDGRNKFHGYNNVLEEQLKDVEMDVKMLTDDKLRLEASVERKAHEVDILTSRIQELE 240

Query: 242 SQLYKERQECRRIKSKIKKFVKAHNRYSRLQDELKRQVYLSQVRLQQLGDQLGPDVNKIG 301
           +QL +E+ ECRRI S  KKFVK +NR+ R QD+LKR    S+ RLQ+LG+QL   +    
Sbjct: 241 TQLDREKDECRRITSSSKKFVKEYNRFLRAQDDLKR----SEARLQKLGNQLSTYLAGSE 300

Query: 302 ANEEDSSINIVSDGEDPGYH---ASGPFHDLQKDTSASKRKMHAVQ-DTAENSNRADLNK 361
            N  D  ++IVSD E  G +   A  P ++LQ  +S S++K +  Q  T E      + +
Sbjct: 301 GNNRDVGLDIVSDEETNGRNLRTACDPHNELQNTSSLSRKKHYVDQYTTKEPVEDGLIGR 360

Query: 362 GNKEAVVRRISR---WNAHPAKSVYSKIEAVGNEVNDLI--PTANESRQKRGRTSSSVST 421
           G +E V     R   WN   +KS YS+ E+      D I   ++ E   KR R S   S 
Sbjct: 361 GEEEKVENEKKRPPCWNMLSSKS-YSEEESGAWNDEDTINRSSSKEDNWKRRRFSIGTSA 420

Query: 422 ADKVRGLESGVVVPLTSMAAHAVDEEVDIDLEINNEVKEPRESTKEAASGSLPFLPPPPP 481
            DK        V+  TSMAA   D           +V E  E   EAA+GS P +  PPP
Sbjct: 421 TDK--------VILSTSMAAREFD-----------DVAESEEENPEAANGS-PLISLPPP 434

Query: 482 PPIREFNHSRYEGEDQNVDVEVVDDEREGMDD 503
           PP R+  H + + +D N DV    ++++  DD
Sbjct: 481 PPFRD-AHVQRDEDDVNGDVM---EQKKAYDD 434

The following BLAST results are available for this feature:

BLAST of CcUC02G018990.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038887776.1	5.9e-200	78.02	zinc finger CCCH domain-containing protein 40 isoform X1 [Benincasa hispida]	[more]
XP_038887777.1	1.3e-199	78.02	zinc finger CCCH domain-containing protein 40 isoform X2 [Benincasa hispida]	[more]
XP_008455411.1	7.2e-190	75.05	PREDICTED: zinc finger CCCH domain-containing protein 40 isoform X1 [Cucumis mel...	[more]
XP_008455412.1	4.7e-189	74.85	PREDICTED: zinc finger CCCH domain-containing protein 40 isoform X2 [Cucumis mel...	[more]
XP_004144583.2	3.3e-187	73.86	zinc finger CCCH domain-containing protein 40 isoform X1 [Cucumis sativus]	[more]

BLAST of CcUC02G018990.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93XW7	1.3e-45	34.77	Zinc finger CCCH domain-containing protein 40 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q6H7U2	2.6e-41	30.38	Zinc finger CCCH domain-containing protein 13 OS=Oryza sativa subsp. japonica OX...	[more]

BLAST of CcUC02G018990.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C0E8	3.5e-190	75.05	zinc finger CCCH domain-containing protein 40 isoform X1 OS=Cucumis melo OX=3656...	[more]
A0A1S3C101	2.3e-189	74.85	zinc finger CCCH domain-containing protein 40 isoform X2 OS=Cucumis melo OX=3656...	[more]
A0A6J1JI85	2.7e-182	72.48	zinc finger CCCH domain-containing protein 40-like isoform X1 OS=Cucurbita maxim...	[more]
A0A6J1GKR3	4.3e-180	71.29	zinc finger CCCH domain-containing protein 13-like isoform X1 OS=Cucurbita mosch...	[more]
A0A6J1ESE6	4.3e-180	71.88	zinc finger CCCH domain-containing protein 40-like isoform X2 OS=Cucurbita mosch...	[more]

BLAST of CcUC02G018990.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G21810.1	9.5e-47	34.77	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 193..213
None	No IPR available	COILS	Coil	Coil	coord: 221..255
None	No IPR available	GENE3D	4.10.1000.10		coord: 2..37 e-value: 7.7E-8 score: 33.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 157..198
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 157..191
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 391..411
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 109..128
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 109..126
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 488..503
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 446..503
None	No IPR available	PANTHER	PTHR38160	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 40	coord: 2..496
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 7..33 score: 12.192311

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CcUC02G018990	CcUC02G018990	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC02G018990.1-exon	CcUC02G018990.1-exon-CicolChr02:1700889..1701225	exon
CcUC02G018990.1-exon	CcUC02G018990.1-exon-CicolChr02:1701441..1701641	exon
CcUC02G018990.1-exon	CcUC02G018990.1-exon-CicolChr02:1701959..1702146	exon
CcUC02G018990.1-exon	CcUC02G018990.1-exon-CicolChr02:1702414..1702628	exon
CcUC02G018990.1-exon	CcUC02G018990.1-exon-CicolChr02:1702703..1702786	exon
CcUC02G018990.1-exon	CcUC02G018990.1-exon-CicolChr02:1702863..1702960	exon
CcUC02G018990.1-exon	CcUC02G018990.1-exon-CicolChr02:1705193..1705249	exon
CcUC02G018990.1-exon	CcUC02G018990.1-exon-CicolChr02:1705343..1705481	exon
CcUC02G018990.1-exon	CcUC02G018990.1-exon-CicolChr02:1705793..1705874	exon
CcUC02G018990.1-exon	CcUC02G018990.1-exon-CicolChr02:1706218..1706316	exon
CcUC02G018990.1-exon	CcUC02G018990.1-exon-CicolChr02:1706550..1706639	exon
CcUC02G018990.1-exon	CcUC02G018990.1-exon-CicolChr02:1706729..1706785	exon
CcUC02G018990.1-exon	CcUC02G018990.1-exon-CicolChr02:1707851..1708313	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC02G018990.1-three_prime_utr	CcUC02G018990.1-three_prime_utr-CicolChr02:1700889..1701153	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC02G018990.1-cds	CcUC02G018990.1-cds-CicolChr02:1701154..1701225	CDS
CcUC02G018990.1-cds	CcUC02G018990.1-cds-CicolChr02:1701441..1701641	CDS
CcUC02G018990.1-cds	CcUC02G018990.1-cds-CicolChr02:1701959..1702146	CDS
CcUC02G018990.1-cds	CcUC02G018990.1-cds-CicolChr02:1702414..1702628	CDS
CcUC02G018990.1-cds	CcUC02G018990.1-cds-CicolChr02:1702703..1702786	CDS
CcUC02G018990.1-cds	CcUC02G018990.1-cds-CicolChr02:1702863..1702960	CDS
CcUC02G018990.1-cds	CcUC02G018990.1-cds-CicolChr02:1705193..1705249	CDS
CcUC02G018990.1-cds	CcUC02G018990.1-cds-CicolChr02:1705343..1705481	CDS
CcUC02G018990.1-cds	CcUC02G018990.1-cds-CicolChr02:1705793..1705874	CDS
CcUC02G018990.1-cds	CcUC02G018990.1-cds-CicolChr02:1706218..1706316	CDS
CcUC02G018990.1-cds	CcUC02G018990.1-cds-CicolChr02:1706550..1706639	CDS
CcUC02G018990.1-cds	CcUC02G018990.1-cds-CicolChr02:1706729..1706785	CDS
CcUC02G018990.1-cds	CcUC02G018990.1-cds-CicolChr02:1707851..1707980	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CcUC02G018990.1-five_prime_utr	CcUC02G018990.1-five_prime_utr-CicolChr02:1707981..1708313	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CcUC02G018990.1	CcUC02G018990.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding