Carg27606-RA (mRNA) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg27606-RA
Type	mRNA
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	amidase 1-like
Location	Carg_Chr10: 7512390 .. 7514641 (+)
Sequence length	860
RNA-Seq Expression	Carg27606-RA
Synteny	Carg27606-RA

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTTTTTATGAGTGGATAAGCCATTGCCGATTCCGTTGTATCATTTGCTGATCCTTCATCATCTTCTTCTTCTTCTCTCGCTTCGCTAGTTTAACCTCCGCTCTGCAATTTCCAGCCACTATTAAGGTGGTTGTGGCGGACTCTGATTCCGATTAGATTCGGAGAAGAAAGGGGGAGAATCTCCGGAGTTGCAATGGCTGTGCAGGATCATGGAGCTTTCATGGAGAAATTCCTCCTGCAACCGAGCTCCCCGTCCGATCAACTTCCCTTGGCTGGCCTCACTTTCGCTGTTAAAGACATGTGAGATTTTTTCTTTTTGATTATTTTCTACTTTTTATTTGGCTTGATAACAGGTTATGAGTTCTGTAATTTCTCTAAAGTATGATGGATAGTATGAAACGCTTTCAGTTTCAATGGTTGGTGGAATTGATGATTCCATCCGATATTATTTATTCGATCAACATATATTCATGAAATGAATTGATCGTTCTTTGGGGAAAATTCCGTTTGTACTAGTGAGTCGATACATTAATTAGTAGTAAGATCAAATTACGAAGTTTTCCATGAATCAATCAATGCATTAAGAAAATAAAACAAGAAGAAATTTAACCAAAAAATGCTAAAAGTTAAGCATCATAATTGTCTAAAACCAATCACAAAAGGTACTTGAATCTAACTACAAAGTAAAGCAAGTGACGAAGTTTCCAAGCTTAACAATAACATGTCCCAACCATGTTAAAGCATCCAATATAACCGGGAAAATGGGATTCATAAAGCATCCATAACTGCTCCTAACTTTCGATGAAGTAAAAGGTAACTCATCTTATATCTTTTAAGAACATTACATCAGGCATGTGGCGGGGAGTTCAACTCTAAGGTTCAAACCTACAACCTCCTGGAGAAAGTAGAGCTGTTTTAATTCTTCAACTTATAGAGAGTATTGATTTTACCACTTAACTAATTTTAGGGTTGAATTTGATGAAATTAATACTTTAAAGGCTAAATTGTACTCACCCATTTTAATACAAGGGTAAAATAATTTTCTGTTGTGAAGTTCTATTTGAATTCTTCTTTTAGAGTAGAAAGAGTATTATGAGTAGTGAAATGAAGATTAAATTGTTATATAACATAAGATTATCGTAACGTTTGTCGCTAAAGCCTAATTCTTATGGCCGATATATTTGTAGATATTGATATCTCCATTCTTACAAGCCATCACCAGTTGGTTTTCTGTTTTAACTGTTCATTAGTGTGTGTAAGATGAAGCTTAGTTCAATAAAATAATTCTTTGTTGTTTTAATGCATGGTCCTTCATATAAAAGTGTCAGTTTTTTTTTTCATGAAACCGGGGCGTTGATGAAAAACTTCTCATTGGACTTTGAACCAAACAGATTTGATGTGGATGGATATGTAACTGGTTTTGGAAATCCTGAATGGCTAAGGACACATCCACCTGCTAGTCAGACAGCCCCTGCCGTGTTGTCGATCCTAAAAGGAGGAGCCACCTGCATTGGCAAGACTATCATGGATGAAATGGCCTACAGGTACCAAGAATTTCTAGCTTTTACTCTTTCTTTTCCTTTTAGCTTTCATTTTTTACAATTGATAACAAACAAACAAGGCATAAGCTTTGGAAATTGGGATACAGCAGATAAAACCATTTTGCACTGCACACCATTCTGTAATTGTCTTAAAACTATGTCTACTCCATTCTTATCATTCTATTGCAAGCAGACAACTCTGCATTGTAATTGGTCAACATATGAACTGAACCAATTATCTTTTGACAGGTTTCTAATTTCTAGTTGAAAATCTTTCACCAAATGATTGTTTGTGACGATGTAGGCTTTTGAATATTTTCATTAGTGGAGTCACTAGCTTGATAATCATATTTTTTCAGTATAAATGGGGAAAACATTCACTATGGCACACCCCAAAACCCACATGCATCAGATCGGATACCTGGAGGATCTTCCAGTGGCTCTGCCGTTGCTGTAGGTGCAAAGCTTGTGGATTTCTCCTTAGGCAAGTTCCTAGTTCTTTGACCTTGAGCAAATTGTGGTTTAATGAATTCTCCCTGGAATATGTTGTAAAGGTCATATTTAGTTTTGTAGGAACTGATACTGGGGGTAGTGTAAGAGTGCCTGCATCCTATTGTGGAATCTTTGGATTTCGGCCTTCACATGGTGCAGTCTCTACCTCTGGAGTAATTCCCATGGCACAGAGCTTTGATACAGTAGGTAATGAGTAG

mRNA sequence

ATTTTTTTATGAGTGGATAAGCCATTGCCGATTCCGTTGTATCATTTGCTGATCCTTCATCATCTTCTTCTTCTTCTCTCGCTTCGCTAGTTTAACCTCCGCTCTGCAATTTCCAGCCACTATTAAGGTGGTTGTGGCGGACTCTGATTCCGATTAGATTCGGAGAAGAAAGGGGGAGAATCTCCGGAGTTGCAATGGCTGTGCAGGATCATGGAGCTTTCATGGAGAAATTCCTCCTGCAACCGAGCTCCCCGTCCGATCAACTTCCCTTGGCTGGCCTCACTTTCGCTGTTAAAGACATATTTGATGTGGATGGATATGTAACTGGTTTTGGAAATCCTGAATGGCTAAGGACACATCCACCTGCTAGTCAGACAGCCCCTGCCGTGTTGTCGATCCTAAAAGGAGGAGCCACCTGCATTGGCAAGACTATCATGGATGAAATGGCCTACAGGCTTTTGAATATTTTCATTAGTGGAGTCACTAGCTTGATAATCATATTTTTTCAGTATAAATGGGGAAAACATTCACTATGGCACACCCCAAAACCCACATGCATCAGATCGGATACCTGGAGGATCTTCCAGTGGCTCTGCCGTTGCTGTAGGTGCAAAGCTTGTGGATTTCTCCTTAGGCAAGTTCCTAGTTCTTTGACCTTGAGCAAATTGTGGTTTAATGAATTCTCCCTGGAATATGTTGTAAAGGTCATATTTAGTTTTGTAGGAACTGATACTGGGGGTAGTGTAAGAGTGCCTGCATCCTATTGTGGAATCTTTGGATTTCGGCCTTCACATGGTGCAGTCTCTACCTCTGGAGTAATTCCCATGGCACAGAGCTTTGATACAGTAGGTAATGAGTAG

Coding sequence (CDS)

ATGGCTGTGCAGGATCATGGAGCTTTCATGGAGAAATTCCTCCTGCAACCGAGCTCCCCGTCCGATCAACTTCCCTTGGCTGGCCTCACTTTCGCTGTTAAAGACATATTTGATGTGGATGGATATGTAACTGGTTTTGGAAATCCTGAATGGCTAAGGACACATCCACCTGCTAGTCAGACAGCCCCTGCCGTGTTGTCGATCCTAAAAGGAGGAGCCACCTGCATTGGCAAGACTATCATGGATGAAATGGCCTACAGGCTTTTGAATATTTTCATTAGTGGAGTCACTAGCTTGATAATCATATTTTTTCAGTATAAATGGGGAAAACATTCACTATGGCACACCCCAAAACCCACATGCATCAGATCGGATACCTGGAGGATCTTCCAGTGGCTCTGCCGTTGCTGTAGGTGCAAAGCTTGTGGATTTCTCCTTAGGCAAGTTCCTAGTTCTTTGACCTTGAGCAAATTGTGGTTTAATGAATTCTCCCTGGAATATGTTGTAAAGGTCATATTTAGTTTTGTAGGAACTGATACTGGGGGTAGTGTAAGAGTGCCTGCATCCTATTGTGGAATCTTTGGATTTCGGCCTTCACATGGTGCAGTCTCTACCTCTGGAGTAATTCCCATGGCACAGAGCTTTGATACAGTAGGTAATGAGTAG

Protein sequence

MAVQDHGAFMEKFLLQPSSPSDQLPLAGLTFAVKDIFDVDGYVTGFGNPEWLRTHPPASQTAPAVLSILKGGATCIGKTIMDEMAYRLLNIFISGVTSLIIIFFQYKWGKHSLWHTPKPTCIRSDTWRIFQWLCRCCRCKACGFLLRQVPSSLTLSKLWFNEFSLEYVVKVIFSFVGTDTGGSVRVPASYCGIFGFRPSHGAVSTSGVIPMAQSFDTVGNE

Homology

[Close]

BLAST of Carg27606-RA vs. NCBI nr
Match: KAG7023950.1 (Amidase 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 465.3 bits (1196), Expect = 2.9e-127
Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 0


Query: 1   MAVQDHGAFMEKFLLQPSSPSDQLPLAGLTFAVKDIFDVDGYVTGFGNPEWLRTHPPASQ 60
           MAVQDHGAFMEKFLLQPSSPSDQLPLAGLTFAVKDIFDVDGYVTGFGNPEWLRTHPPASQ
Sbjct: 1   MAVQDHGAFMEKFLLQPSSPSDQLPLAGLTFAVKDIFDVDGYVTGFGNPEWLRTHPPASQ 60

Query: 61  TAPAVLSILKGGATCIGKTIMDEMAYRLLNIFISGVTSLIIIFFQYKWGKHSLWHTPKPT 120
           TAPAVLSILKGGATCIGKTIMDEMAYRLLNIFISGVTSLIIIFFQYKWGKHSLWHTPKPT
Sbjct: 61  TAPAVLSILKGGATCIGKTIMDEMAYRLLNIFISGVTSLIIIFFQYKWGKHSLWHTPKPT 120

Query: 121 CIRSDTWRIFQWLCRCCRCKACGFLLRQVPSSLTLSKLWFNEFSLEYVVKVIFSFVGTDT 180
           CIRSDTWRIFQWLCRCCRCKACGFLLRQVPSSLTLSKLWFNEFSLEYVVKVIFSFVGTDT
Sbjct: 121 CIRSDTWRIFQWLCRCCRCKACGFLLRQVPSSLTLSKLWFNEFSLEYVVKVIFSFVGTDT 180

Query: 181 GGSVRVPASYCGIFGFRPSHGAVSTSGVIPMAQSFDTVGNE 222
           GGSVRVPASYCGIFGFRPSHGAVSTSGVIPMAQSFDTVGNE
Sbjct: 181 GGSVRVPASYCGIFGFRPSHGAVSTSGVIPMAQSFDTVGNE 221

[Close]

BLAST of Carg27606-RA vs. NCBI nr
Match: XP_022961591.1 (amidase 1-like [Cucurbita moschata])

HSP 1 Score: 245.7 bits (626), Expect = 3.6e-61
Identity = 136/219 (62.10%), Postives = 149/219 (68.04%), Query Frame = 0


Query: 1   MAVQDHGAFMEKFLLQPSSPSDQLPLAGLTFAVKDIFDVDGYVTGFGNPEWLRTHPPASQ 60
           MAVQDHGAFMEKFLLQPSSPSDQLPLAGLTFAVKDIFDVDGYVTGFGNPEWLRTHPPASQ
Sbjct: 1   MAVQDHGAFMEKFLLQPSSPSDQLPLAGLTFAVKDIFDVDGYVTGFGNPEWLRTHPPASQ 60

Query: 61  TAPAVLSILKGGATCIGKTIMDEMAYRLLNIFISGVTSLIIIFFQYKWGKHSLWHTPKPT 120
           TAPAVLSILKGGATCIGKTIMDEMAY +                    G++  + TP+  
Sbjct: 61  TAPAVLSILKGGATCIGKTIMDEMAYSIN-------------------GENIHYGTPQ-N 120

Query: 121 CIRSDTWRIFQWLCRCCRCKACGFLLRQVPSSLTLSKLWFNEFSLEYVVKVIFSFVGTDT 180
              SD                      ++P   +         ++    K++   +GTDT
Sbjct: 121 PHASD----------------------RIPGGSSSGS------AVAVGAKLVDFSLGTDT 171

Query: 181 GGSVRVPASYCGIFGFRPSHGAVSTSGVIPMAQSFDTVG 220
           GGSVRVPASYCGIFGFRPSHGAVSTSGVIPMAQSFDTVG
Sbjct: 181 GGSVRVPASYCGIFGFRPSHGAVSTSGVIPMAQSFDTVG 171

[Close]

BLAST of Carg27606-RA vs. NCBI nr
Match: KAG6590388.1 (Amidase 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 245.7 bits (626), Expect = 3.6e-61
Identity = 136/219 (62.10%), Postives = 149/219 (68.04%), Query Frame = 0


Query: 1   MAVQDHGAFMEKFLLQPSSPSDQLPLAGLTFAVKDIFDVDGYVTGFGNPEWLRTHPPASQ 60
           MAVQDHGAFMEKFLLQPSSPSDQLPLAGLTFAVKDIFDVDGYVTGFGNPEWLRTHPPASQ
Sbjct: 1   MAVQDHGAFMEKFLLQPSSPSDQLPLAGLTFAVKDIFDVDGYVTGFGNPEWLRTHPPASQ 60

Query: 61  TAPAVLSILKGGATCIGKTIMDEMAYRLLNIFISGVTSLIIIFFQYKWGKHSLWHTPKPT 120
           TAPAVLSILKGGATCIGKTIMDEMAY +                    G++  + TP+  
Sbjct: 61  TAPAVLSILKGGATCIGKTIMDEMAYSIN-------------------GENIHYGTPQ-N 120

Query: 121 CIRSDTWRIFQWLCRCCRCKACGFLLRQVPSSLTLSKLWFNEFSLEYVVKVIFSFVGTDT 180
              SD                      ++P   +         ++    K++   +GTDT
Sbjct: 121 PHASD----------------------RIPGGSSSGS------AVAVGAKLVDFSLGTDT 171

Query: 181 GGSVRVPASYCGIFGFRPSHGAVSTSGVIPMAQSFDTVG 220
           GGSVRVPASYCGIFGFRPSHGAVSTSGVIPMAQSFDTVG
Sbjct: 181 GGSVRVPASYCGIFGFRPSHGAVSTSGVIPMAQSFDTVG 171

[Close]

BLAST of Carg27606-RA vs. NCBI nr
Match: XP_023516592.1 (amidase 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 245.0 bits (624), Expect = 6.2e-61
Identity = 134/219 (61.19%), Postives = 147/219 (67.12%), Query Frame = 0


Query: 1   MAVQDHGAFMEKFLLQPSSPSDQLPLAGLTFAVKDIFDVDGYVTGFGNPEWLRTHPPASQ 60
           MAVQDHGAFMEKFLLQPSSPSDQLPLAGLTFAVKDIFDVDGYVTGFGNPEWLRTHPPASQ
Sbjct: 1   MAVQDHGAFMEKFLLQPSSPSDQLPLAGLTFAVKDIFDVDGYVTGFGNPEWLRTHPPASQ 60

Query: 61  TAPAVLSILKGGATCIGKTIMDEMAYRLLNIFISGVTSLIIIFFQYKWGKHSLWHTPKPT 120
           TAPAVLSILKGGATCIGKTIMDEMAY +                    G++  + TP+  
Sbjct: 61  TAPAVLSILKGGATCIGKTIMDEMAYSIN-------------------GENIHYGTPQNP 120

Query: 121 CIRSDTWRIFQWLCRCCRCKACGFLLRQVPSSLTLSKLWFNEFSLEYVVKVIFSFVGTDT 180
                                      ++P   +         ++    K++   +GTDT
Sbjct: 121 RAPD-----------------------RIPGGSSSGS------AVAVGAKLVDFSLGTDT 171

Query: 181 GGSVRVPASYCGIFGFRPSHGAVSTSGVIPMAQSFDTVG 220
           GGSVRVPASYCGIFGFRPSHGAVSTSGVIPMAQSFDTVG
Sbjct: 181 GGSVRVPASYCGIFGFRPSHGAVSTSGVIPMAQSFDTVG 171

[Close]

BLAST of Carg27606-RA vs. NCBI nr
Match: XP_022968725.1 (amidase 1 isoform X3 [Cucurbita maxima])

HSP 1 Score: 242.3 bits (617), Expect = 4.0e-60
Identity = 134/219 (61.19%), Postives = 148/219 (67.58%), Query Frame = 0


Query: 1   MAVQDHGAFMEKFLLQPSSPSDQLPLAGLTFAVKDIFDVDGYVTGFGNPEWLRTHPPASQ 60
           MAVQDHGAFMEKFLLQPSSPSDQLPLAGLTFAVKDIFDVDGYVTGFGNPEWLRTHPPA+Q
Sbjct: 1   MAVQDHGAFMEKFLLQPSSPSDQLPLAGLTFAVKDIFDVDGYVTGFGNPEWLRTHPPANQ 60

Query: 61  TAPAVLSILKGGATCIGKTIMDEMAYRLLNIFISGVTSLIIIFFQYKWGKHSLWHTPKPT 120
           TAPAV SILKGGATCIGKTIMDEMAY +                    G++  + TP+  
Sbjct: 61  TAPAVSSILKGGATCIGKTIMDEMAYSIN-------------------GENIHYGTPQ-N 120

Query: 121 CIRSDTWRIFQWLCRCCRCKACGFLLRQVPSSLTLSKLWFNEFSLEYVVKVIFSFVGTDT 180
              SD                      ++P   +         ++    K++   +GTDT
Sbjct: 121 PHASD----------------------RIPGGSSSGS------AVAVGAKLVDFSLGTDT 171

Query: 181 GGSVRVPASYCGIFGFRPSHGAVSTSGVIPMAQSFDTVG 220
           GGSVRVPASYCGIFGFRPSHGAVSTSGVIPMAQSFDTVG
Sbjct: 181 GGSVRVPASYCGIFGFRPSHGAVSTSGVIPMAQSFDTVG 171

[Close]

BLAST of Carg27606-RA vs. ExPASy Swiss-Prot
Match: Q7XTK3 (Amidase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=AMI1 PE=1 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 6.0e-43
Identity = 98/215 (45.58%), Postives = 121/215 (56.28%), Query Frame = 0


Query: 5   DHGAFMEKFLLQPSSPSDQLPLAGLTFAVKDIFDVDGYVTGFGNPEWLRTHPPASQTAPA 64
           D+GAFME+F+L P  PS QLPL GLTFA+KDIFD+ G VTGFGNP+W RTH PA+ T+P 
Sbjct: 10  DYGAFMERFVL-PPPPSQQLPLHGLTFAIKDIFDIAGRVTGFGNPDWARTHAPAAATSPV 69

Query: 65  VLSILKGGATCIGKTIMDEMAYRLLNIFISGVTSLIIIFFQYKWGKHSLWHTPKPTCIRS 124
           VL+ L  GAT +G TIMDEMAY +                    G+++ + TP   C   
Sbjct: 70  VLAALAAGATSLGTTIMDEMAYSIN-------------------GENTHYGTPTNPCAPG 129

Query: 125 DTWRIFQWLCRCCRCKACGFLLRQVPSSLTLSKLWFNEFSLEYVVKVIFSFVGTDTGGSV 184
                                  +VP   +         ++     ++   +GTDTGGSV
Sbjct: 130 -----------------------RVPGGSSSGS------AVAVAANLVDFSLGTDTGGSV 175

Query: 185 RVPASYCGIFGFRPSHGAVSTSGVIPMAQSFDTVG 220
           RVPA+YCGIFG RPSHG VS   VIPMAQ FDTVG
Sbjct: 190 RVPAAYCGIFGLRPSHGLVSAENVIPMAQMFDTVG 175

[Close]

BLAST of Carg27606-RA vs. ExPASy Swiss-Prot
Match: Q9FR37 (Amidase 1 OS=Arabidopsis thaliana OX=3702 GN=AMI1 PE=1 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 1.3e-42
Identity = 99/216 (45.83%), Postives = 124/216 (57.41%), Query Frame = 0


Query: 5   DHGAFMEKFLLQPSSPSDQLP-LAGLTFAVKDIFDVDGYVTGFGNPEWLRTHPPASQTAP 64
           D GAF+EK  + P+S S   P L GLTFA+KDIFDV+G VTGFGNP+WLRTH  A+ TAP
Sbjct: 6   DFGAFIEKVTISPTSTSSSPPSLQGLTFAIKDIFDVEGRVTGFGNPDWLRTHSAATSTAP 65

Query: 65  AVLSILKGGATCIGKTIMDEMAYRLLNIFISGVTSLIIIFFQYKWGKHSLWHTPKPTCIR 124
            V S+L+ GAT +G TIMDEMAY +                    G+++ + TP+     
Sbjct: 66  VVSSLLEAGATALGITIMDEMAYSIN-------------------GENAHYGTPRNP--- 125

Query: 125 SDTWRIFQWLCRCCRCKACGFLLRQVPSSLTLSKLWFNEFSLEYVVKVIFSFVGTDTGGS 184
                                   +VP   +         ++    +++   +GTDTGGS
Sbjct: 126 --------------------IAFDRVPGGSSSGS------AVAVAARLVDFSIGTDTGGS 173

Query: 185 VRVPASYCGIFGFRPSHGAVSTSGVIPMAQSFDTVG 220
           VRVPASYCGIFGFRPSHGAVST G+ PMAQSFDTVG
Sbjct: 186 VRVPASYCGIFGFRPSHGAVSTVGLTPMAQSFDTVG 173

[Close]

BLAST of Carg27606-RA vs. ExPASy Swiss-Prot
Match: Q9LVH5 (Outer envelope protein 64, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OEP64 PE=1 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 6.1e-35
Identity = 81/220 (36.82%), Postives = 117/220 (53.18%), Query Frame = 0


Query: 4   QDHGAFMEKFLL----QPSSPSDQLPLAGLTFAVKDIFDVDGYVTGFGNPEWLRTHPPAS 63
           +D GAF++K +L    QP+ P    PL GLTFAV D+FD+ GYVTGFG+P+W+RTH  AS
Sbjct: 32  EDFGAFIDKLMLLPPPQPAPPKAPHPLTGLTFAVSDVFDITGYVTGFGHPDWVRTHEAAS 91

Query: 64  QTAPAVLSILKGGATCIGKTIMDEMAYRLLNIFISGVTSLIIIFFQYKWGKHSLWHTPKP 123
            T+P V ++++GGATC+GKT++DE A+      ISG                   H   P
Sbjct: 92  STSPVVSTLVEGGATCVGKTVVDEFAFS-----ISGENK----------------HYDSP 151

Query: 124 TCIRSDTWRIFQWLCRCCRCKACGFLLRQVPSSLTLSKLWFNEFSLEYVVKVIFSFVGTD 183
           T   + T                     ++P          +  ++      +   +G D
Sbjct: 152 TNPAAPT---------------------RIPGGAC------SGAAVAVATNAVDFALGID 203

Query: 184 TGGSVRVPASYCGIFGFRPSHGAVSTSGVIPMAQSFDTVG 220
           T G VRVPA YCG+ GF+ S+GA+S +G+IP++ S D+VG
Sbjct: 212 TVGGVRVPAGYCGVLGFKSSYGAISNTGIIPVSSSLDSVG 203

[Close]

BLAST of Carg27606-RA vs. ExPASy Swiss-Prot
Match: Q9MUK5 (Translocon at the outer membrane of chloroplasts 64 OS=Pisum sativum OX=3888 GN=TOC64 PE=1 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 2.8e-32
Identity = 85/220 (38.64%), Postives = 117/220 (53.18%), Query Frame = 0


Query: 4   QDHGAFMEKFLL----QPSSPSDQLPLAGLTFAVKDIFDVDGYVTGFGNPEWLRTHPPAS 63
           +D GAF+ K  L     P+ P    PL+ L FA+ DIFD++G+V+ FG+PEW RTH PAS
Sbjct: 35  EDFGAFLLKLKLLPPPPPAPPKAPHPLSSLNFAISDIFDIEGHVSTFGHPEWARTHEPAS 94

Query: 64  QTAPAVLSILKGGATCIGKTIMDEMAYRLLNIFISGVTSLIIIFFQYKWGKHSLWHTPKP 123
            TA AV ++++ GATCIG T++DE+AY        G++           G++  + TP  
Sbjct: 95  STASAVSALVESGATCIGTTVVDELAY--------GIS-----------GENKHFGTPTN 154

Query: 124 TCIRSDTWRIFQWLCRCCRCKACGFLLRQVPSSLTLSKLWFNEFSLEYVVKVIFSFVGTD 183
             + +          R     + G  +    +        F +FSL           G D
Sbjct: 155 PAVPN----------RVPGGSSSGAAVAVAAN--------FVDFSL-----------GVD 206

Query: 184 TGGSVRVPASYCGIFGFRPSHGAVSTSGVIPMAQSFDTVG 220
           T G VRVPA +CGI GFRPSHGAVS  G+IP++ S DTVG
Sbjct: 215 TSGGVRVPAGFCGILGFRPSHGAVSHVGIIPVSTSLDTVG 206

[Close]

BLAST of Carg27606-RA vs. ExPASy Swiss-Prot
Match: F4KCL7 (Outer envelope protein 64, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=OM64 PE=1 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 2.6e-30
Identity = 76/220 (34.55%), Postives = 114/220 (51.82%), Query Frame = 0


Query: 4   QDHGAFMEKFLL----QPSSPSDQLPLAGLTFAVKDIFDVDGYVTGFGNPEWLRTHPPAS 63
           +D GAF+++F L     P  P+ +  L+GLTF++ D FDV  Y+TGFG P+W +TH  A 
Sbjct: 45  EDFGAFLDRFELLPFPPPPPPAAKQSLSGLTFSISDAFDVKDYITGFGCPQWKKTHEAAE 104

Query: 64  QTAPAVLSILKGGATCIGKTIMDEMAYRLLNIFISGVTSLIIIFFQYKWGKHSLWHTPKP 123
           +TA  V ++LK GATC+GKTIMDE+ + ++                   G++  + TP  
Sbjct: 105 KTAVVVTTLLKNGATCVGKTIMDELGFGII-------------------GENKHYGTPIN 164

Query: 124 TCIRSDTWRIFQWLCRCCRCKACGFLLRQVPSSLTLSKLWFNEFSLEYVVKVIFSFVGTD 183
             +  +                       VP   +         ++    +++   +G D
Sbjct: 165 PLMPDN-----------------------VPGGCSSGS------AVSVGAELVDFSLGID 216

Query: 184 TGGSVRVPASYCGIFGFRPSHGAVSTSGVIPMAQSFDTVG 220
           T G VRVPA++CGI GFRPS G VS+ GV+P +QS +TVG
Sbjct: 225 TTGGVRVPAAFCGILGFRPSQGTVSSVGVLPNSQSLETVG 216

[Close]

BLAST of Carg27606-RA vs. ExPASy TrEMBL
Match: A0A6J1HAS6 (amidase 1-like OS=Cucurbita moschata OX=3662 GN=LOC111462124 PE=3 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 1.8e-61
Identity = 136/219 (62.10%), Postives = 149/219 (68.04%), Query Frame = 0


Query: 1   MAVQDHGAFMEKFLLQPSSPSDQLPLAGLTFAVKDIFDVDGYVTGFGNPEWLRTHPPASQ 60
           MAVQDHGAFMEKFLLQPSSPSDQLPLAGLTFAVKDIFDVDGYVTGFGNPEWLRTHPPASQ
Sbjct: 1   MAVQDHGAFMEKFLLQPSSPSDQLPLAGLTFAVKDIFDVDGYVTGFGNPEWLRTHPPASQ 60

Query: 61  TAPAVLSILKGGATCIGKTIMDEMAYRLLNIFISGVTSLIIIFFQYKWGKHSLWHTPKPT 120
           TAPAVLSILKGGATCIGKTIMDEMAY +                    G++  + TP+  
Sbjct: 61  TAPAVLSILKGGATCIGKTIMDEMAYSIN-------------------GENIHYGTPQ-N 120

Query: 121 CIRSDTWRIFQWLCRCCRCKACGFLLRQVPSSLTLSKLWFNEFSLEYVVKVIFSFVGTDT 180
              SD                      ++P   +         ++    K++   +GTDT
Sbjct: 121 PHASD----------------------RIPGGSSSGS------AVAVGAKLVDFSLGTDT 171

Query: 181 GGSVRVPASYCGIFGFRPSHGAVSTSGVIPMAQSFDTVG 220
           GGSVRVPASYCGIFGFRPSHGAVSTSGVIPMAQSFDTVG
Sbjct: 181 GGSVRVPASYCGIFGFRPSHGAVSTSGVIPMAQSFDTVG 171

[Close]

BLAST of Carg27606-RA vs. ExPASy TrEMBL
Match: A0A6J1HY10 (amidase 1 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111467873 PE=3 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 1.9e-60
Identity = 134/219 (61.19%), Postives = 148/219 (67.58%), Query Frame = 0


Query: 1   MAVQDHGAFMEKFLLQPSSPSDQLPLAGLTFAVKDIFDVDGYVTGFGNPEWLRTHPPASQ 60
           MAVQDHGAFMEKFLLQPSSPSDQLPLAGLTFAVKDIFDVDGYVTGFGNPEWLRTHPPA+Q
Sbjct: 1   MAVQDHGAFMEKFLLQPSSPSDQLPLAGLTFAVKDIFDVDGYVTGFGNPEWLRTHPPANQ 60

Query: 61  TAPAVLSILKGGATCIGKTIMDEMAYRLLNIFISGVTSLIIIFFQYKWGKHSLWHTPKPT 120
           TAPAV SILKGGATCIGKTIMDEMAY +                    G++  + TP+  
Sbjct: 61  TAPAVSSILKGGATCIGKTIMDEMAYSIN-------------------GENIHYGTPQ-N 120

Query: 121 CIRSDTWRIFQWLCRCCRCKACGFLLRQVPSSLTLSKLWFNEFSLEYVVKVIFSFVGTDT 180
              SD                      ++P   +         ++    K++   +GTDT
Sbjct: 121 PHASD----------------------RIPGGSSSGS------AVAVGAKLVDFSLGTDT 171

Query: 181 GGSVRVPASYCGIFGFRPSHGAVSTSGVIPMAQSFDTVG 220
           GGSVRVPASYCGIFGFRPSHGAVSTSGVIPMAQSFDTVG
Sbjct: 181 GGSVRVPASYCGIFGFRPSHGAVSTSGVIPMAQSFDTVG 171

[Close]

BLAST of Carg27606-RA vs. ExPASy TrEMBL
Match: A0A6J1HVP2 (amidase 1 isoform X4 OS=Cucurbita maxima OX=3661 GN=LOC111467873 PE=3 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 6.9e-58
Identity = 130/219 (59.36%), Postives = 146/219 (66.67%), Query Frame = 0


Query: 1   MAVQDHGAFMEKFLLQPSSPSDQLPLAGLTFAVKDIFDVDGYVTGFGNPEWLRTHPPASQ 60
           MAVQDHGAF+EKF+LQ SSPSD LPLAGLTFAVKDIFDVDGYVTGFGNPEWLRTHPPA+Q
Sbjct: 1   MAVQDHGAFIEKFILQLSSPSDPLPLAGLTFAVKDIFDVDGYVTGFGNPEWLRTHPPANQ 60

Query: 61  TAPAVLSILKGGATCIGKTIMDEMAYRLLNIFISGVTSLIIIFFQYKWGKHSLWHTPKPT 120
           TAPAV SILKGGATCIGKTIMDEMAY +                    G++  + TP+  
Sbjct: 61  TAPAVSSILKGGATCIGKTIMDEMAYSIN-------------------GENIHYGTPQ-N 120

Query: 121 CIRSDTWRIFQWLCRCCRCKACGFLLRQVPSSLTLSKLWFNEFSLEYVVKVIFSFVGTDT 180
              SD                      ++P   +         ++    K++   +GTDT
Sbjct: 121 PHASD----------------------RIPGGSSSGS------AVAVGAKLVDFSLGTDT 171

Query: 181 GGSVRVPASYCGIFGFRPSHGAVSTSGVIPMAQSFDTVG 220
           GGSVRVPASYCGIFGFRPSHGAVSTSGVIPMAQSFDTVG
Sbjct: 181 GGSVRVPASYCGIFGFRPSHGAVSTSGVIPMAQSFDTVG 171

[Close]

BLAST of Carg27606-RA vs. ExPASy TrEMBL
Match: A0A6J1DR29 (amidase 1 OS=Momordica charantia OX=3673 GN=LOC111023546 PE=3 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 1.0e-56
Identity = 121/219 (55.25%), Postives = 145/219 (66.21%), Query Frame = 0


Query: 1   MAVQDHGAFMEKFLLQPSSPSDQLPLAGLTFAVKDIFDVDGYVTGFGNPEWLRTHPPASQ 60
           MAVQDHGAF+EKFLLQPSSPSD+LPLAGLTFAVKDIFD+DGYVTGFGNPEW RTHPPA+Q
Sbjct: 1   MAVQDHGAFVEKFLLQPSSPSDELPLAGLTFAVKDIFDMDGYVTGFGNPEWARTHPPANQ 60

Query: 61  TAPAVLSILKGGATCIGKTIMDEMAYRLLNIFISGVTSLIIIFFQYKWGKHSLWHTPKPT 120
           TAP V +IL+GGATCIG+T+MDEMAY +                    G++  + TP+  
Sbjct: 61  TAPTVSTILRGGATCIGRTVMDEMAYSIN-------------------GENIHYGTPQNP 120

Query: 121 CIRSDTWRIFQWLCRCCRCKACGFLLRQVPSSLTLSKLWFNEFSLEYVVKVIFSFVGTDT 180
                                  + L ++P   +         ++    K++   +GTDT
Sbjct: 121 -----------------------YALDRIPGGSSSGS------AVAVGAKLVDFSLGTDT 171

Query: 181 GGSVRVPASYCGIFGFRPSHGAVSTSGVIPMAQSFDTVG 220
           GGS+RVPASYCGI GFRPSHGAVSTSGVIPM+QSFDTVG
Sbjct: 181 GGSIRVPASYCGILGFRPSHGAVSTSGVIPMSQSFDTVG 171

[Close]

BLAST of Carg27606-RA vs. ExPASy TrEMBL
Match: A0A5A7UBG8 (Amidase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold761G00040 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 1.9e-55
Identity = 124/219 (56.62%), Postives = 145/219 (66.21%), Query Frame = 0


Query: 1   MAVQDHGAFMEKFLLQPSSPSDQLPLAGLTFAVKDIFDVDGYVTGFGNPEWLRTHPPASQ 60
           MAV D GAF+EKFLLQ SSPSDQLPL+GLTFAVKDIFD++GYV GFGNPEWLRTHPPA+Q
Sbjct: 1   MAVDDCGAFIEKFLLQMSSPSDQLPLSGLTFAVKDIFDIEGYVAGFGNPEWLRTHPPANQ 60

Query: 61  TAPAVLSILKGGATCIGKTIMDEMAYRLLNIFISGVTSLIIIFFQYKWGKHSLWHTPKPT 120
           TAPAVL+IL+GGATCIGKT+MDEMA+ +                    G++  + TP+  
Sbjct: 61  TAPAVLTILRGGATCIGKTMMDEMAFSIN-------------------GENFHYGTPQNP 120

Query: 121 CIRSDTWRIFQWLCRCCRCKACGFLLRQVPSSLTLSKLWFNEFSLEYVVKVIFSFVGTDT 180
           C                   A G   R    S + S +      +++ +  I  FVGTDT
Sbjct: 121 C-------------------ASG---RIPGGSSSGSGVAVAAKLVDFSLGTIPQFVGTDT 178

Query: 181 GGSVRVPASYCGIFGFRPSHGAVSTSGVIPMAQSFDTVG 220
           GGSVRVPASYCG+ GFRPSHG VSTSGVIPM QSFDTVG
Sbjct: 181 GGSVRVPASYCGVLGFRPSHGVVSTSGVIPMTQSFDTVG 178

[Close]

BLAST of Carg27606-RA vs. TAIR 10
Match: AT1G08980.1 (amidase 1 )

HSP 1 Score: 174.5 bits (441), Expect = 9.6e-44
Identity = 99/216 (45.83%), Postives = 124/216 (57.41%), Query Frame = 0


Query: 5   DHGAFMEKFLLQPSSPSDQLP-LAGLTFAVKDIFDVDGYVTGFGNPEWLRTHPPASQTAP 64
           D GAF+EK  + P+S S   P L GLTFA+KDIFDV+G VTGFGNP+WLRTH  A+ TAP
Sbjct: 6   DFGAFIEKVTISPTSTSSSPPSLQGLTFAIKDIFDVEGRVTGFGNPDWLRTHSAATSTAP 65

Query: 65  AVLSILKGGATCIGKTIMDEMAYRLLNIFISGVTSLIIIFFQYKWGKHSLWHTPKPTCIR 124
            V S+L+ GAT +G TIMDEMAY +                    G+++ + TP+     
Sbjct: 66  VVSSLLEAGATALGITIMDEMAYSIN-------------------GENAHYGTPRNP--- 125

Query: 125 SDTWRIFQWLCRCCRCKACGFLLRQVPSSLTLSKLWFNEFSLEYVVKVIFSFVGTDTGGS 184
                                   +VP   +         ++    +++   +GTDTGGS
Sbjct: 126 --------------------IAFDRVPGGSSSGS------AVAVAARLVDFSIGTDTGGS 173

Query: 185 VRVPASYCGIFGFRPSHGAVSTSGVIPMAQSFDTVG 220
           VRVPASYCGIFGFRPSHGAVST G+ PMAQSFDTVG
Sbjct: 186 VRVPASYCGIFGFRPSHGAVSTVGLTPMAQSFDTVG 173

[Close]

BLAST of Carg27606-RA vs. TAIR 10
Match: AT3G17970.1 (translocon at the outer membrane of chloroplasts 64-III )

HSP 1 Score: 149.1 bits (375), Expect = 4.3e-36
Identity = 81/220 (36.82%), Postives = 117/220 (53.18%), Query Frame = 0


Query: 4   QDHGAFMEKFLL----QPSSPSDQLPLAGLTFAVKDIFDVDGYVTGFGNPEWLRTHPPAS 63
           +D GAF++K +L    QP+ P    PL GLTFAV D+FD+ GYVTGFG+P+W+RTH  AS
Sbjct: 32  EDFGAFIDKLMLLPPPQPAPPKAPHPLTGLTFAVSDVFDITGYVTGFGHPDWVRTHEAAS 91

Query: 64  QTAPAVLSILKGGATCIGKTIMDEMAYRLLNIFISGVTSLIIIFFQYKWGKHSLWHTPKP 123
            T+P V ++++GGATC+GKT++DE A+      ISG                   H   P
Sbjct: 92  STSPVVSTLVEGGATCVGKTVVDEFAFS-----ISGENK----------------HYDSP 151

Query: 124 TCIRSDTWRIFQWLCRCCRCKACGFLLRQVPSSLTLSKLWFNEFSLEYVVKVIFSFVGTD 183
           T   + T                     ++P          +  ++      +   +G D
Sbjct: 152 TNPAAPT---------------------RIPGGAC------SGAAVAVATNAVDFALGID 203

Query: 184 TGGSVRVPASYCGIFGFRPSHGAVSTSGVIPMAQSFDTVG 220
           T G VRVPA YCG+ GF+ S+GA+S +G+IP++ S D+VG
Sbjct: 212 TVGGVRVPAGYCGVLGFKSSYGAISNTGIIPVSSSLDSVG 203

[Close]

BLAST of Carg27606-RA vs. TAIR 10
Match: AT5G09420.1 (translocon at the outer membrane of chloroplasts 64-V )

HSP 1 Score: 133.7 bits (335), Expect = 1.9e-31
Identity = 76/220 (34.55%), Postives = 114/220 (51.82%), Query Frame = 0


Query: 4   QDHGAFMEKFLL----QPSSPSDQLPLAGLTFAVKDIFDVDGYVTGFGNPEWLRTHPPAS 63
           +D GAF+++F L     P  P+ +  L+GLTF++ D FDV  Y+TGFG P+W +TH  A 
Sbjct: 45  EDFGAFLDRFELLPFPPPPPPAAKQSLSGLTFSISDAFDVKDYITGFGCPQWKKTHEAAE 104

Query: 64  QTAPAVLSILKGGATCIGKTIMDEMAYRLLNIFISGVTSLIIIFFQYKWGKHSLWHTPKP 123
           +TA  V ++LK GATC+GKTIMDE+ + ++                   G++  + TP  
Sbjct: 105 KTAVVVTTLLKNGATCVGKTIMDELGFGII-------------------GENKHYGTPIN 164

Query: 124 TCIRSDTWRIFQWLCRCCRCKACGFLLRQVPSSLTLSKLWFNEFSLEYVVKVIFSFVGTD 183
             +  +                       VP   +         ++    +++   +G D
Sbjct: 165 PLMPDN-----------------------VPGGCSSGS------AVSVGAELVDFSLGID 216

Query: 184 TGGSVRVPASYCGIFGFRPSHGAVSTSGVIPMAQSFDTVG 220
           T G VRVPA++CGI GFRPS G VS+ GV+P +QS +TVG
Sbjct: 225 TTGGVRVPAAFCGILGFRPSQGTVSSVGVLPNSQSLETVG 216

[Close]

BLAST of Carg27606-RA vs. TAIR 10
Match: AT3G25660.1 (Amidase family protein )

HSP 1 Score: 56.2 bits (134), Expect = 3.8e-08
Identity = 23/44 (52.27%), Postives = 33/44 (75.00%), Query Frame = 0


Query: 176 VGTDTGGSVRVPASYCGIFGFRPSHGAVSTSGVIPMAQSFDTVG 220
           +G+DTGGSVR PAS+CG+ G +P++G VS  G++  A S D +G
Sbjct: 208 LGSDTGGSVRQPASFCGVVGLKPTYGRVSRFGLMAYASSLDVIG 251

[Close]

BLAST of Carg27606-RA vs. TAIR 10
Match: AT5G07360.2 (Amidase family protein )

HSP 1 Score: 45.8 bits (107), Expect = 5.1e-05
Identity = 30/95 (31.58%), Postives = 47/95 (49.47%), Query Frame = 0


Query: 138 RCKACGFLL--RQVPSSLTLSKLWF----------NEFSL-EYVVKVIFSFVGTDTGGSV 197
           R KA G +L  + V  S+    +WF           EFS          +  G++T GS+
Sbjct: 307 RLKASGAVLVAKLVTGSMAYDDIWFGGRTRNPWNIEEFSTGSSAGPAASTSAGSETAGSM 366

Query: 198 RVPASYCGIFGFRPSHGAVSTSGVIPMAQSFDTVG 220
             PA+ CGI   RP+ G+V  +GV+ +++S D +G
Sbjct: 367 TYPAARCGITALRPTFGSVGRTGVMSISESLDKLG 401

The following BLAST results are available for this feature:

BLAST of Carg27606-RA vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7023950.1	2.9e-127	100.00	Amidase 1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022961591.1	3.6e-61	62.10	amidase 1-like [Cucurbita moschata]	[more]
KAG6590388.1	3.6e-61	62.10	Amidase 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023516592.1	6.2e-61	61.19	amidase 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022968725.1	4.0e-60	61.19	amidase 1 isoform X3 [Cucurbita maxima]	[more]

BLAST of Carg27606-RA vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7XTK3	6.0e-43	45.58	Amidase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=AMI1 PE=1 SV=1	[more]
Q9FR37	1.3e-42	45.83	Amidase 1 OS=Arabidopsis thaliana OX=3702 GN=AMI1 PE=1 SV=1	[more]
Q9LVH5	6.1e-35	36.82	Outer envelope protein 64, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OEP6...	[more]
Q9MUK5	2.8e-32	38.64	Translocon at the outer membrane of chloroplasts 64 OS=Pisum sativum OX=3888 GN=...	[more]
F4KCL7	2.6e-30	34.55	Outer envelope protein 64, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=OM64...	[more]

BLAST of Carg27606-RA vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HAS6	1.8e-61	62.10	amidase 1-like OS=Cucurbita moschata OX=3662 GN=LOC111462124 PE=3 SV=1	[more]
A0A6J1HY10	1.9e-60	61.19	amidase 1 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111467873 PE=3 SV=1	[more]
A0A6J1HVP2	6.9e-58	59.36	amidase 1 isoform X4 OS=Cucurbita maxima OX=3661 GN=LOC111467873 PE=3 SV=1	[more]
A0A6J1DR29	1.0e-56	55.25	amidase 1 OS=Momordica charantia OX=3673 GN=LOC111023546 PE=3 SV=1	[more]
A0A5A7UBG8	1.9e-55	56.62	Amidase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold761G00040...	[more]

BLAST of Carg27606-RA vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G08980.1	9.6e-44	45.83	amidase 1	[more]
AT3G17970.1	4.3e-36	36.82	translocon at the outer membrane of chloroplasts 64-III	[more]
AT5G09420.1	1.9e-31	34.55	translocon at the outer membrane of chloroplasts 64-V	[more]
AT3G25660.1	3.8e-08	52.27	Amidase family protein	[more]
AT5G07360.2	5.1e-05	31.58	Amidase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036928	Amidase signature (AS) superfamily	GENE3D	3.90.1300.10	Amidase signature (AS) domain	coord: 173..220 e-value: 2.4E-19 score: 71.5
IPR036928	Amidase signature (AS) superfamily	GENE3D	3.90.1300.10	Amidase signature (AS) domain	coord: 13..101 e-value: 1.1E-14 score: 56.4
IPR036928	Amidase signature (AS) superfamily	SUPERFAMILY	75304	Amidase signature (AS) enzymes	coord: 176..219
IPR036928	Amidase signature (AS) superfamily	SUPERFAMILY	75304	Amidase signature (AS) enzymes	coord: 14..89
IPR023631	Amidase signature domain	PFAM	PF01425	Amidase	coord: 176..219 e-value: 8.3E-18 score: 64.6 coord: 22..86 e-value: 3.7E-6 score: 26.2
None	No IPR available	PANTHER	PTHR46310:SF7	AMIDASE 1	coord: 4..88
None	No IPR available	PANTHER	PTHR46310:SF7	AMIDASE 1	coord: 176..219
None	No IPR available	PANTHER	PTHR46310	AMIDASE 1	coord: 176..219
None	No IPR available	PANTHER	PTHR46310	AMIDASE 1	coord: 4..88

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg27606	Carg27606	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg27606-RA:1	Carg27606-RA:1	exon
Carg27606-RA:2	Carg27606-RA:2	exon
Carg27606-RA:3	Carg27606-RA:3	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg27606-RA:five_prime_utr	Carg27606-RA:five_prime_utr	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg27606-RA:cds	Carg27606-RA:cds	CDS
Carg27606-RA:cds	Carg27606-RA:cds_2	CDS
Carg27606-RA:cds	Carg27606-RA:cds_3	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg27606-RA	Carg27606-RA-protein	polypeptide