Carg25908-RA (mRNA) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg25908-RA
Type	mRNA
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	plant UBX domain-containing protein 4-like
Location	Carg_Chr04: 11261261 .. 11265091 (-)
Sequence length	893
RNA-Seq Expression	Carg25908-RA
Synteny	Carg25908-RA

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAGAAAAGAAAAAGGTCGTACCAGAATCCTCTTCCTCAACATTCTCCTCCTCCTCTTCCCCTTTGCCTTTCTTCGATCAGCGTCTTCAATGGCGTCACGGGATGAGAAGCCGTCGAAGCCCTCCAGCAGTCGGACCGGCGGTATTCGAACCCTTTCCGATCTTAACCGACGGTCCCCTGATTCTGTTGGCGACCCCGATGCTCCTCAAGAGTATTACACCGGTGGTGAGAAGAGGTCTCTTTTCTGCCCTAATTTTTACTTCCTTTTTCTTCTTGCTTTTACTTACGTCAATTTCTATTCCACACATCATTCCATTCCATCAGGAGAATGTTTATAAGAGTCTTCTTCCGTTTTCATACCTAATCTTAATATGTATGCCCTCATCCTTCTTCTCAATTGAAAGGTTATGGAAAATCCATTTCATTCCGGATTCCTCTAAATGATCGTTCCATATATTTTGGTTACATGGGGTCCGGTATAAACAAGTAGGCATTCTGATAACCCAACTCTAATTTTGAGCACAACTATCCTTGTTGAACCAAAAATCCTTGAATCAAACAAATTTACACCTCCTCGTACAAAATTCGGATCAACCAACACATAATCTTAGAATTAGATTACCTCCCACCATCAAAGATCTAAAAGCAAGATTTGGAACTTTGTTCTAAATTGAGACTCTACGATCGAACATGATCAACGCTTGATTGAATGGCTCAGATGCATAAAAAAAATTTGAAACTTAGAAATGAACGTTAGAAATGAACGATGCTCAAAATTTCTAAGAGTCTGTCTCTTAAGTAGTGATTTGTGGGTACGTATTGTCTCCCCAGTTTTAATTCTTTAAAGTTAGTGGTCATAATTTACTCCTACTCCTTTGAATCTTTTAATCTCCAAGTCAATTTGACAAATAACTTCCCACTCTTTTGTCCACTACAAGAATTATGAAATTAAAATAATAAATAAAGTTTTGTAACAACTTATCAATTAAGTTGCAACCGTGCAAATATTCACCTCTGAAACTTCAAATTGTCCTTCCTCAATCGAATCAACTTGTAACCTATGAAATAATGGTTGAATCAAGCCTATCAAATTTTGTAGATGAAGAATGATTGAATCTTTCTTGTACGGGGTTAATAGGTCCAGTTGGAGGAGGTAACCTCTTCTGAACTCTGTTCTATTTGCCCACCAAGTGTTAGCAAACTCTGGCAAAAAAATTTAACTATATATTTTTTCCAACTTCCAATTGAAAACTTGACATAACCGAAGAAGAGAGCCCAATTCTTACTGATATCAAACCAAGGTCTTCCACCACCAGCAGTCTTAGTCTCTACGGCCTTCCAACCACTGGAATTACAACCATAAATGGCAACAATCACTTTCCTCCAAAAGGCCTCCTTTTCAAAGCTAAACCTCCACAACCATTTCAACAAGAGGGAGGTATTTCTATACTGAAGAGAACCCACACCCAAACCTCCAAGGGCAGTCAGCATTGAATTGGTTAGCAGCTAACCAAATTGGTACCTGGTTTGTAAGTTCCCCCATGTCAGGCAAAGTCTCATAATTTTCTCCATGGCTCCTATAGTCTTCAATGGGGCCTTAAGGAGCGTGAAAGGTAGATGGGGATACTATTCGACACCGATTGAGCTAGAGTCGATCTACCTCCCTTGGAAAGGAGGAGGCCAAACCACTTGTCCTGTTTCATCACCATTTTGTTGATAATAGCCTTTTCAAATAATCGTGGGAACACTGCTACTAAATCATGCTTCACAATGTTCCATGCTTTTTTAAAAAATTTGCTAGTTGTACCATCGGAGCCTGAGGAATTTTGGTTTCCCATATCGGAAATGGCTTTGAAAATCTCTTCCTCACTAAAAGGAACCTCAATGCTTCCTTTTTCATGCTCTGTATTGGTGTAGACATGCTTTTCCTTTCAATGATTATAGCTTTTGCTGATCTGAGGTTGACAATATTGGTTGATGCTTATTGAATGATAACTCTGTTTCCAACTTTCAGTGGGATGCTTGTCCAAGATCCTACAAAGGGTAATGATGTGGATTCACTTTTCAATCACGCTAGGCAAATGGGAGCTGTGGAAGGCCCTATTGATCATGCCCGTTCATCAACCTCCAGCAGCTTTACTGGAACTGGTAGGTTACTCACAGGAGAAACTGTCCGTTCTGCACCTGATCAGCCTGAGAACGTTGTTCACAATATTGTATTCTGGAGTAATGGTTTTACCGTAAATGATAGCCCTTTGAGGAGGTTGGATGATCCTGAAAACGCATCCTTTTTGGAGGTAGGTGAAATATAATACTGATGATGTTCTAATGAAATATTTATGTGTACACACGCACGCGCGCACACGGGCATGCATCCATGGATAACTTAAGAGCGGAAACAACATGGAATGCAGTTTATAGAAAATACTTGATCCTTTACAAGTGTTTGTATGGTTTTCGAATTCATGAAGAAATGTTGCTGGATGTGTTCTTGTTTGTTTAGCTCCGTTGGGTACATTTCTTTCTTCGAATTACTGATTACTGCCCTTAGGTGGGTGTCTTTACATGTTTATATGATCTTTCATCAGAGCATCAGAAAGTCTGAGTGCCCCAGAGAGCTTGAACCTGCAGACAGGAGGTCCTCCGTTCATGTGAATTTAATTAGGAGGATGGAGGAGTATCGTGTAAGTATCCTTATTAGATTTCACTGGTTAGTTCGGTTGAGGATTAGAGTCCCATGTTGGCTAATTTAGTGGAAGATCATGGGTTTATAAGTGAGGAATACTATCTCCATTGGTATGAGGCCTTTTGGGGAAGTCCAAAGCAAAGCCACGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTATGGAGACTCGTGATTTCCAACATGGTATCAGAGCCATGTCCTAAACTTAGCCATGACAATAGAATCCTCAAATATCGAACAAAGATTGTGAGCCTCGAAAGTGTTGTAAAAAAGTGACTAAAGTGTCGAACAAATGGTGTATTTTGTTCGAAGGCTTCAGAGAAAAGAGTCGAGTCTCGATTAAGGGGAGGCTGTTCGAGAGCTCCATAAGCCTCAGGGGAGGCTTATAGTGTACTTTGTTCGAGGAGAGGATTTTGTTGAGGATTGTTGAGGATTATTGGGACTGAGTCCTACCTTGGTTAATTGAGTGGAAGATCATGGGTTTATAAGTAAGGAATACTATCTTCATTGGTATGAGGCCTTTTGGAGAAGCCCAAAGCAATGTCATGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGAGTCGTGATTCCTAACAGGTTCTACAATACCTAGATATACGAACCATGATAAATGATTTAAACTTACTCGTTTAGGGTTGAGAAACTGTTTGAGTCGATAGTTAACCGTTAAGAAACGCTAAGCATCTTAGACATTGTATTTTGCATCTTGCAGGAACCAGAGAAGCCACGTCTTCCATTTCAAGGTGTAGGAAGAACTCTTGGTGGTAGCGCCCCAGCAAACGAGCCAACTGCTACTCCCACCGATGTCAATAGCAGTCCAAGCCCTTCTGCAGGCCTGGTCGTGGATGACTCGTTGCCATCAACCTCGATTCAGCTTCGGTTGGCAGATGGAACACGCATGGTAGCTCATTTCAATTACCATCACACAATCAGCGATGTTCGTGCTTTCATCGACGCGTCTAGGCCGGGGGGTTCCAGGAACTATCAGCTGCAGTTGATGGGCTTCCCTCCCAAGCTTCTTAACGACCTGACTCGGACAATCGAGCAGGCCGGTCTTGCCAATTCTGTCGTCATCCAGAAGTTTTAG

mRNA sequence

AAAGAAAAGAAAAAGGTCGTACCAGAATCCTCTTCCTCAACATTCTCCTCCTCCTCTTCCCCTTTGCCTTTCTTCGATCAGCGTCTTCAATGGCGTCACGGGATGAGAAGCCGTCGAAGCCCTCCAGCAGTCGGACCGGCGGTATTCGAACCCTTTCCGATCTTAACCGACGGTCCCCTGATTCTGTTGGCGACCCCGATGCTCCTCAAGAGTATTACACCGGTGGTGAGAAGAGTGGGATGCTTGTCCAAGATCCTACAAAGGGTAATGATGTGGATTCACTTTTCAATCACGCTAGGCAAATGGGAGCTGTGGAAGGCCCTATTGATCATGCCCGTTCATCAACCTCCAGCAGCTTTACTGGAACTGGTAGGTTACTCACAGGAGAAACTGTCCGTTCTGCACCTGATCAGCCTGAGAACGTTGTTCACAATATTGTATTCTGGAGTAATGGTTTTACCGTAAATGATAGCCCTTTGAGGAGGTTGGATGATCCTGAAAACGCATCCTTTTTGGAGGAACCAGAGAAGCCACGTCTTCCATTTCAAGGTGTAGGAAGAACTCTTGGTGGTAGCGCCCCAGCAAACGAGCCAACTGCTACTCCCACCGATGTCAATAGCAGTCCAAGCCCTTCTGCAGGCCTGGTCGTGGATGACTCGTTGCCATCAACCTCGATTCAGCTTCGGTTGGCAGATGGAACACGCATGGTAGCTCATTTCAATTACCATCACACAATCAGCGATGTTCGTGCTTTCATCGACGCGTCTAGGCCGGGGGGTTCCAGGAACTATCAGCTGCAGTTGATGGGCTTCCCTCCCAAGCTTCTTAACGACCTGACTCGGACAATCGAGCAGGCCGGTCTTGCCAATTCTGTCGTCATCCAGAAGTTTTAG

Coding sequence (CDS)

ATGGCGTCACGGGATGAGAAGCCGTCGAAGCCCTCCAGCAGTCGGACCGGCGGTATTCGAACCCTTTCCGATCTTAACCGACGGTCCCCTGATTCTGTTGGCGACCCCGATGCTCCTCAAGAGTATTACACCGGTGGTGAGAAGAGTGGGATGCTTGTCCAAGATCCTACAAAGGGTAATGATGTGGATTCACTTTTCAATCACGCTAGGCAAATGGGAGCTGTGGAAGGCCCTATTGATCATGCCCGTTCATCAACCTCCAGCAGCTTTACTGGAACTGGTAGGTTACTCACAGGAGAAACTGTCCGTTCTGCACCTGATCAGCCTGAGAACGTTGTTCACAATATTGTATTCTGGAGTAATGGTTTTACCGTAAATGATAGCCCTTTGAGGAGGTTGGATGATCCTGAAAACGCATCCTTTTTGGAGGAACCAGAGAAGCCACGTCTTCCATTTCAAGGTGTAGGAAGAACTCTTGGTGGTAGCGCCCCAGCAAACGAGCCAACTGCTACTCCCACCGATGTCAATAGCAGTCCAAGCCCTTCTGCAGGCCTGGTCGTGGATGACTCGTTGCCATCAACCTCGATTCAGCTTCGGTTGGCAGATGGAACACGCATGGTAGCTCATTTCAATTACCATCACACAATCAGCGATGTTCGTGCTTTCATCGACGCGTCTAGGCCGGGGGGTTCCAGGAACTATCAGCTGCAGTTGATGGGCTTCCCTCCCAAGCTTCTTAACGACCTGACTCGGACAATCGAGCAGGCCGGTCTTGCCAATTCTGTCGTCATCCAGAAGTTTTAG

Protein sequence

MASRDEKPSKPSSSRTGGIRTLSDLNRRSPDSVGDPDAPQEYYTGGEKSGMLVQDPTKGNDVDSLFNHARQMGAVEGPIDHARSSTSSSFTGTGRLLTGETVRSAPDQPENVVHNIVFWSNGFTVNDSPLRRLDDPENASFLEEPEKPRLPFQGVGRTLGGSAPANEPTATPTDVNSSPSPSAGLVVDDSLPSTSIQLRLADGTRMVAHFNYHHTISDVRAFIDASRPGGSRNYQLQLMGFPPKLLNDLTRTIEQAGLANSVVIQKF

Homology

[Close]

BLAST of Carg25908-RA vs. NCBI nr
Match: KAG7032424.1 (Plant UBX domain-containing protein 3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 533.9 bits (1374), Expect = 8.1e-148
Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 0


Query: 1   MASRDEKPSKPSSSRTGGIRTLSDLNRRSPDSVGDPDAPQEYYTGGEKSGMLVQDPTKGN 60
           MASRDEKPSKPSSSRTGGIRTLSDLNRRSPDSVGDPDAPQEYYTGGEKSGMLVQDPTKGN
Sbjct: 1   MASRDEKPSKPSSSRTGGIRTLSDLNRRSPDSVGDPDAPQEYYTGGEKSGMLVQDPTKGN 60

Query: 61  DVDSLFNHARQMGAVEGPIDHARSSTSSSFTGTGRLLTGETVRSAPDQPENVVHNIVFWS 120
           DVDSLFNHARQMGAVEGPIDHARSSTSSSFTGTGRLLTGETVRSAPDQPENVVHNIVFWS
Sbjct: 61  DVDSLFNHARQMGAVEGPIDHARSSTSSSFTGTGRLLTGETVRSAPDQPENVVHNIVFWS 120

Query: 121 NGFTVNDSPLRRLDDPENASFLEEPEKPRLPFQGVGRTLGGSAPANEPTATPTDVNSSPS 180
           NGFTVNDSPLRRLDDPENASFLEEPEKPRLPFQGVGRTLGGSAPANEPTATPTDVNSSPS
Sbjct: 121 NGFTVNDSPLRRLDDPENASFLEEPEKPRLPFQGVGRTLGGSAPANEPTATPTDVNSSPS 180

Query: 181 PSAGLVVDDSLPSTSIQLRLADGTRMVAHFNYHHTISDVRAFIDASRPGGSRNYQLQLMG 240
           PSAGLVVDDSLPSTSIQLRLADGTRMVAHFNYHHTISDVRAFIDASRPGGSRNYQLQLMG
Sbjct: 181 PSAGLVVDDSLPSTSIQLRLADGTRMVAHFNYHHTISDVRAFIDASRPGGSRNYQLQLMG 240

Query: 241 FPPKLLNDLTRTIEQAGLANSVVIQKF 268
           FPPKLLNDLTRTIEQAGLANSVVIQKF
Sbjct: 241 FPPKLLNDLTRTIEQAGLANSVVIQKF 267

[Close]

BLAST of Carg25908-RA vs. NCBI nr
Match: KAG6583775.1 (Plant UBX domain-containing protein 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 517.3 bits (1331), Expect = 7.8e-143
Identity = 267/299 (89.30%), Postives = 267/299 (89.30%), Query Frame = 0


Query: 1   MASRDEKPSKPSSSRTGGIRTLSDLNRRSPDSVGDPDAPQEYYTGGEKSGMLVQDPTKGN 60
           MASRDEKPSKPSSSRTGGIRTLSDLNRRSPDSVGDPDAPQEYYTGGEKSGMLVQDPTKGN
Sbjct: 1   MASRDEKPSKPSSSRTGGIRTLSDLNRRSPDSVGDPDAPQEYYTGGEKSGMLVQDPTKGN 60

Query: 61  DVDSLFNHARQMGAVEGPIDHARSSTSSSFTGTGRLLTGETVRSAPDQPENVVHNIVFWS 120
           DVDSLFNHARQMGAVEGPIDHARSSTSSSFTGTGRLLTGETVRSAPDQPENVVHNIVFWS
Sbjct: 61  DVDSLFNHARQMGAVEGPIDHARSSTSSSFTGTGRLLTGETVRSAPDQPENVVHNIVFWS 120

Query: 121 NGFTVNDSPLRRLDDPENASFLE--------------------------------EPEKP 180
           NGFTVNDSPLRRLDDPENASFLE                                EPEKP
Sbjct: 121 NGFTVNDSPLRRLDDPENASFLESIRKSECPRELEPADRRSSVHVNLIRRMEEYREPEKP 180

Query: 181 RLPFQGVGRTLGGSAPANEPTATPTDVNSSPSPSAGLVVDDSLPSTSIQLRLADGTRMVA 240
           RLPFQGVGRTLGGSAPANEPTATPTDVNSSPSPSAGLVVDDSLPSTSIQLRLADGTRMVA
Sbjct: 181 RLPFQGVGRTLGGSAPANEPTATPTDVNSSPSPSAGLVVDDSLPSTSIQLRLADGTRMVA 240

Query: 241 HFNYHHTISDVRAFIDASRPGGSRNYQLQLMGFPPKLLNDLTRTIEQAGLANSVVIQKF 268
           HFNYHHTISDVRAFIDASRPGGSRNYQLQLMGFPPKLLNDLTRTIEQAGLANSVVIQKF
Sbjct: 241 HFNYHHTISDVRAFIDASRPGGSRNYQLQLMGFPPKLLNDLTRTIEQAGLANSVVIQKF 299

[Close]

BLAST of Carg25908-RA vs. NCBI nr
Match: XP_023519023.1 (plant UBX domain-containing protein 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 515.0 bits (1325), Expect = 3.9e-142
Identity = 265/299 (88.63%), Postives = 267/299 (89.30%), Query Frame = 0


Query: 1   MASRDEKPSKPSSSRTGGIRTLSDLNRRSPDSVGDPDAPQEYYTGGEKSGMLVQDPTKGN 60
           MASRDEKPSKPSSSRTGGIRTLSDLNRRSPDSVGDPDAPQEYYTGGEKSGMLVQDPTKGN
Sbjct: 1   MASRDEKPSKPSSSRTGGIRTLSDLNRRSPDSVGDPDAPQEYYTGGEKSGMLVQDPTKGN 60

Query: 61  DVDSLFNHARQMGAVEGPIDHARSSTSSSFTGTGRLLTGETVRSAPDQPENVVHNIVFWS 120
           DVDSLFNHARQMGAVEGPIDHARSSTSSSFTGTGRLLTGETVRSAPDQPENVVHNIVFWS
Sbjct: 61  DVDSLFNHARQMGAVEGPIDHARSSTSSSFTGTGRLLTGETVRSAPDQPENVVHNIVFWS 120

Query: 121 NGFTVNDSPLRRLDDPENASFLE--------------------------------EPEKP 180
           NGFTVNDSPLRRLDDPENASFLE                                EPEKP
Sbjct: 121 NGFTVNDSPLRRLDDPENASFLESIRKSECPRELEPADRRSSVHVNLIRRMEEYREPEKP 180

Query: 181 RLPFQGVGRTLGGSAPANEPTATPTDVNSSPSPSAGLVVDDSLPSTSIQLRLADGTRMVA 240
           RLPFQGVGRTLGGSAPANEPTATPTDVNSSPSPSAGLV+DDSLPSTSIQLRLADGTRMVA
Sbjct: 181 RLPFQGVGRTLGGSAPANEPTATPTDVNSSPSPSAGLVMDDSLPSTSIQLRLADGTRMVA 240

Query: 241 HFNYHHTISDVRAFIDASRPGGSRNYQLQLMGFPPKLLNDLTRTIEQAGLANSVVIQKF 268
           HFNYHHTISDVRAFIDASRPGG+RNYQLQLMGFPPKLLNDLTRTIEQAGLANSVVIQKF
Sbjct: 241 HFNYHHTISDVRAFIDASRPGGARNYQLQLMGFPPKLLNDLTRTIEQAGLANSVVIQKF 299

[Close]

BLAST of Carg25908-RA vs. NCBI nr
Match: XP_022927190.1 (plant UBX domain-containing protein 4-like [Cucurbita moschata])

HSP 1 Score: 511.9 bits (1317), Expect = 3.3e-141
Identity = 264/299 (88.29%), Postives = 266/299 (88.96%), Query Frame = 0


Query: 1   MASRDEKPSKPSSSRTGGIRTLSDLNRRSPDSVGDPDAPQEYYTGGEKSGMLVQDPTKGN 60
           MASRDEKPSKPSSSRTGGIRTLSDLNRRSPDSVGDPDAPQEYYTGGEKSGMLVQDPTKGN
Sbjct: 1   MASRDEKPSKPSSSRTGGIRTLSDLNRRSPDSVGDPDAPQEYYTGGEKSGMLVQDPTKGN 60

Query: 61  DVDSLFNHARQMGAVEGPIDHARSSTSSSFTGTGRLLTGETVRSAPDQPENVVHNIVFWS 120
           DVDSLFNHARQMGAVEGPIDHARSSTSSSFTGTGRLLTGETVRSAPDQPEN+VHNIVFWS
Sbjct: 61  DVDSLFNHARQMGAVEGPIDHARSSTSSSFTGTGRLLTGETVRSAPDQPENLVHNIVFWS 120

Query: 121 NGFTVNDSPLRRLDDPENASFLE--------------------------------EPEKP 180
           NGFTVNDSPLRRLDDPENASFLE                                EPEKP
Sbjct: 121 NGFTVNDSPLRRLDDPENASFLESIRKSECPRELEPADRRSSVHVNLIRRMEEYREPEKP 180

Query: 181 RLPFQGVGRTLGGSAPANEPTATPTDVNSSPSPSAGLVVDDSLPSTSIQLRLADGTRMVA 240
           RLPFQGVGRTLGGSAPANEPTATPTDVNSSPSPSAGLVVDDSLPSTSIQLRLADGTRMVA
Sbjct: 181 RLPFQGVGRTLGGSAPANEPTATPTDVNSSPSPSAGLVVDDSLPSTSIQLRLADGTRMVA 240

Query: 241 HFNYHHTISDVRAFIDASRPGGSRNYQLQLMGFPPKLLNDLTRTIEQAGLANSVVIQKF 268
           HFNYHHTISDVRAFIDASRP G+RNYQLQLMGFPPKLLNDLTRTIEQAGLANSVVIQKF
Sbjct: 241 HFNYHHTISDVRAFIDASRPEGARNYQLQLMGFPPKLLNDLTRTIEQAGLANSVVIQKF 299

[Close]

BLAST of Carg25908-RA vs. NCBI nr
Match: XP_023001630.1 (plant UBX domain-containing protein 4-like [Cucurbita maxima])

HSP 1 Score: 501.1 bits (1289), Expect = 5.8e-138
Identity = 260/299 (86.96%), Postives = 262/299 (87.63%), Query Frame = 0


Query: 1   MASRDEKPSKPSSSRTGGIRTLSDLNRRSPDSVGDPDAPQEYYTGGEKSGMLVQDPTKGN 60
           MASRDEKPSKP SSRTGGIRTLSDLNRRSPDSVGDPDAPQEYYTGGEKSGMLVQDPTKGN
Sbjct: 1   MASRDEKPSKPCSSRTGGIRTLSDLNRRSPDSVGDPDAPQEYYTGGEKSGMLVQDPTKGN 60

Query: 61  DVDSLFNHARQMGAVEGPIDHARSSTSSSFTGTGRLLTGETVRSAPDQPENVVHNIVFWS 120
           DVDSLFNHARQMGAVEGPIDHARSSTSSSFTGTGRLLTGETVRSAPDQPENVVHNIVFWS
Sbjct: 61  DVDSLFNHARQMGAVEGPIDHARSSTSSSFTGTGRLLTGETVRSAPDQPENVVHNIVFWS 120

Query: 121 NGFTVNDSPLRRLDDPENASFLE--------------------------------EPEKP 180
           NGFTVNDSPLRRLDDPENASFLE                                EPEKP
Sbjct: 121 NGFTVNDSPLRRLDDPENASFLESIRKSECPRELEPADRRSSVHVNLIRRMEEYREPEKP 180

Query: 181 RLPFQGVGRTLGGSAPANEPTATPTDVNSSPSPSAGLVVDDSLPSTSIQLRLADGTRMVA 240
           RLPFQGVGRTLGG APANEPTAT TDVNSSPS SAG VVDDSLPSTSIQLRLADGTRMVA
Sbjct: 181 RLPFQGVGRTLGGGAPANEPTATLTDVNSSPSASAGPVVDDSLPSTSIQLRLADGTRMVA 240

Query: 241 HFNYHHTISDVRAFIDASRPGGSRNYQLQLMGFPPKLLNDLTRTIEQAGLANSVVIQKF 268
           HFNYHHTISDVRAFIDASRPGG+RNYQLQLMGFPPKLL+DLTRTIEQAGLANSVVIQKF
Sbjct: 241 HFNYHHTISDVRAFIDASRPGGARNYQLQLMGFPPKLLSDLTRTIEQAGLANSVVIQKF 299

[Close]

BLAST of Carg25908-RA vs. ExPASy Swiss-Prot
Match: Q8RWU7 (Plant UBX domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=PUX4 PE=1 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 3.3e-96
Identity = 189/306 (61.76%), Postives = 224/306 (73.20%), Query Frame = 0


Query: 1   MASRDEKPSKPSSSRTGGIRTLSDLNRRS-PDSVGDPDAPQEYYTGGEKSGMLVQDPTKG 60
           M+S+D+KPSKPSSSR GGIRTLSDLNRRS PDS  D D PQEYYTGGEKSGMLVQDP+K 
Sbjct: 1   MSSKDKKPSKPSSSR-GGIRTLSDLNRRSGPDSDSDSDGPQEYYTGGEKSGMLVQDPSKK 60

Query: 61  NDVDSLFNHARQMGAVEGPIDHARSSTSSSFTGTGRLLTGETVRSAPDQPENVVHNIVFW 120
           +DVD +FN ARQ+GAVEGP++   S  S SFTGTGRLL+GE V +   QPE VVHNIVFW
Sbjct: 61  DDVDEIFNQARQLGAVEGPLEPPPS--SRSFTGTGRLLSGENVPTGNQQPEPVVHNIVFW 120

Query: 121 SNGFTVNDSPLRRLDDPENASFLE--------------------------------EPEK 180
           SNGFT++D PLR+LDDPENASFLE                                E +K
Sbjct: 121 SNGFTIDDGPLRKLDDPENASFLESIRKSECPKELEPADRRAPVHVNLMRKEEKCPERQK 180

Query: 181 PRLPFQGVGRTLGGSAPAN------EPTATPTDVNSSPSPSAGLVVDDSLPSTSIQLRLA 240
            R+ FQGVGRTLGGS   +       P + P  + + P+PS  LV+D+++P+TSIQLRLA
Sbjct: 181 RRVSFQGVGRTLGGSNEGSGSSSPVAPDSAPIPIQTEPAPSQSLVIDETVPTTSIQLRLA 240

Query: 241 DGTRMVAHFNYHHTISDVRAFIDASRPGGSRNYQLQLMGFPPKLLNDLTRTIEQAGLANS 268
           DGTR+VA FN+HHT++D+R FID+SRPG S NYQLQ MGFPPK L DLT+TIE+AGLANS
Sbjct: 241 DGTRLVAKFNHHHTVNDIRGFIDSSRPGASLNYQLQTMGFPPKPLTDLTQTIEEAGLANS 300

[Close]

BLAST of Carg25908-RA vs. ExPASy Swiss-Prot
Match: Q9SUG6 (Plant UBX domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=PUX3 PE=1 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 2.2e-92
Identity = 186/304 (61.18%), Postives = 223/304 (73.36%), Query Frame = 0


Query: 1   MASRDEKPSKPSSSRTGGIRTLSDLNRRS-PDSVGDPDAPQEYYTGGEKSGMLVQDPT-- 60
           M+S+D+K SKP+S RTGGIRTLSDLNRRS PDS  D D PQEY+TGGEKSGMLVQDPT  
Sbjct: 1   MSSKDKKLSKPTSGRTGGIRTLSDLNRRSEPDSDSDSDGPQEYFTGGEKSGMLVQDPTKE 60

Query: 61  -KGNDVDSLFNHARQMGAVEGPIDHARSSTSSSFTGTGRLLTGETVRSAPDQPENVVHNI 120
            K +DVD +FN ARQ+GAVEGP++H   S+S SFTGTGRLL+GE+V +A  QPE V+HNI
Sbjct: 61  PKHDDVDEIFNQARQLGAVEGPLEH--PSSSRSFTGTGRLLSGESVPTALQQPEPVIHNI 120

Query: 121 VFWSNGFTVNDSPLRRLDDPENASFLE--------------------------------E 180
           +FWSNGFTV+D PLR+LDDPENASFL+                                E
Sbjct: 121 IFWSNGFTVDDGPLRKLDDPENASFLDSIRKSECPKELEPVDKRAPVHVNLMRRDEKCPE 180

Query: 181 PEKPRLPFQGVGRTLGGSAPANEPT-ATPTDVNSSPSPSAGLVVDDSLPSTSIQLRLADG 240
            EK ++ FQGVGRTLGG++ +   + +  TDV +  SP   LVVD++LPSTSIQLRLADG
Sbjct: 181 KEKLKVSFQGVGRTLGGASSSTASSQSNLTDVAAVQSPLQSLVVDETLPSTSIQLRLADG 240

Query: 241 TRMVAHFNYHHTISDVRAFIDASRPGGSRNYQLQLMGFPPKLLNDLTRTIEQAGLANSVV 268
           TRMVA FN HHT++D+R FI+ SRPG   NY LQ+MGFPPK L D ++TIEQAGLA+SVV
Sbjct: 241 TRMVAKFNNHHTVNDIRGFIEFSRPGNPNNYTLQVMGFPPKPLTDPSQTIEQAGLASSVV 300

[Close]

BLAST of Carg25908-RA vs. ExPASy Swiss-Prot
Match: Q7Y175 (Plant UBX domain-containing protein 5 OS=Arabidopsis thaliana OX=3702 GN=PUX5 PE=1 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 5.4e-78
Identity = 165/306 (53.92%), Postives = 201/306 (65.69%), Query Frame = 0


Query: 6   EKPSKPSSSRT----GGIRTLSDLNRRSPDSVG-DPDAPQEYYTGGEKSGMLVQDPTKGN 65
           E PS   SSR+    G IRT +DLNR   D  G D D   EYYTGG+KSGM+VQDP K  
Sbjct: 118 ENPSGIRSSRSRQHAGNIRTFADLNRSPADGEGSDSDEANEYYTGGQKSGMMVQDPKKVK 177

Query: 66  DVDSLFNHARQMGAVEGPIDHARSSTSSSFTGTGRLLTGETVRSAP-----DQPENVVHN 125
           DVD LF+ ARQ  AV+ P++ +RS+ S+SFTG  RLL+GE V S+P     +QP+ ++H 
Sbjct: 178 DVDELFDQARQ-SAVDRPVEPSRSA-STSFTGAARLLSGEAVSSSPQQQQQEQPQRIMHT 237

Query: 126 IVFWSNGFTVNDSPLRRLDDPENASFLE-------------------------------- 185
           I FW NGFTVND PLR   DPENA+F+                                 
Sbjct: 238 ITFWLNGFTVNDGPLRGFSDPENAAFMNSISRSECPSELEPADKKIPVHVDLVRRGENFT 297

Query: 186 EPEKPRLPFQGVGRTLG--GSAPANEPTATPTDVNSSPSPSAGLVVDDSLPSTSIQLRLA 245
           EP KP+ PFQGVGRTLG  GS  ++ P A+   +N +P+PS GLVVD + P+TSIQLRLA
Sbjct: 298 EPPKPKNPFQGVGRTLGASGSGSSSAPQASSAPMNVAPAPSRGLVVDPAAPTTSIQLRLA 357

Query: 246 DGTRMVAHFNYHHTISDVRAFIDASRPGGSRNYQLQLMGFPPKLLNDLTRTIEQAGLANS 268
           DGTR+V+ FN HHT+ DVR FIDASRPGGS+ YQL  MGFPPK L +L +TIEQAG+AN+
Sbjct: 358 DGTRLVSRFNNHHTVRDVRGFIDASRPGGSKEYQLLTMGFPPKQLTELDQTIEQAGIANA 417

[Close]

BLAST of Carg25908-RA vs. ExPASy Swiss-Prot
Match: F4IXN6 (Plant UBX domain-containing protein 6 OS=Arabidopsis thaliana OX=3702 GN=PUX6 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 1.0e-36
Identity = 91/204 (44.61%), Postives = 124/204 (60.78%), Query Frame = 0


Query: 82  ARSSTSSSFTGTGRLLTGET------VRSAPDQP-ENVVHNIVFWSNGFTVNDSPLRRLD 141
           A+ S       + ++L+GET       +   DQP E V + +  W NGFTV+D P + LD
Sbjct: 232 AKESAIERSEQSSKVLSGETDSAELQEQQQEDQPYEVVTYTVTIWRNGFTVDDDPFKSLD 291

Query: 142 DPENASFLE-EPEKPRLPFQGVGRTLGGSA---------PANEPTATPTDVNSSPSPS-A 201
           DPENA+FLE  PE  +       R+   S+           +E T+T   + ++  PS +
Sbjct: 292 DPENAAFLEYMPEDNKFGVPTTTRSTSCSSQTHQELQTLAGSESTSTEPPLTTTQPPSMS 351

Query: 202 GLVVDDSLPSTSIQLRLADGTRMVAHFNYHHTISDVRAFIDASRPGGSRNYQLQLMGFPP 261
            LVVD + P+TSIQL LAD TR+V  FN HHTI D+R FID SRP GS++YQL +MG PP
Sbjct: 352 SLVVDPAAPTTSIQLILADSTRIVTQFNTHHTIRDIRCFIDTSRPDGSKDYQLLIMGSPP 411

Query: 262 KLLNDLTRTIEQAGLANSVVIQKF 268
             L+D  +TIE+AG+ANSV++QKF
Sbjct: 412 TPLSDFDQTIEKAGIANSVLVQKF 435

[Close]

BLAST of Carg25908-RA vs. ExPASy Swiss-Prot
Match: Q54BQ5 (NSFL1 cofactor p47 homolog OS=Dictyostelium discoideum OX=44689 GN=nsfl1c PE=3 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 2.6e-32
Identity = 111/326 (34.05%), Postives = 164/326 (50.31%), Query Frame = 0


Query: 11  PSSSRTGGIRTLSDLNRRSPD----SVGD---PDAPQEYYTGGEKSGMLVQDPTK----- 70
           P+  R GGIRTLSD N    D    S GD    D  Q+Y+TGGEKSG++V+   K     
Sbjct: 93  PAGGRVGGIRTLSDFNNDDHDDHDHSDGDDDEDDRSQQYFTGGEKSGLVVESAPKKGKNG 152

Query: 71  --GNDVDSLFNHARQMGAVEGPIDHARSSTSSSFTGTGRLL----TGETVRSAP---DQP 130
             G+ V+ +F+ A++ GAV    +  +     SF   G  L     G    S P   D  
Sbjct: 153 GSGDIVNDVFDSAKRHGAVAS--NEKKVEKPDSFDSVGYQLGATDQGNRNVSKPKEKDPN 212

Query: 131 ENVVH-NIVFWSNGFTVNDSPLRRLDDPENASFLE------------------------- 190
             VV   + FW+ GFT++D PLR+ D+PEN   L+                         
Sbjct: 213 SQVVEVKVTFWNQGFTIDDGPLRKYDNPENKELLDDIQRGIVPRELQKKATTPNGLSVTL 272

Query: 191 ---------EPEKPR-LPFQGVGRTLGGSAPA------------NEPTATPTDVNSSPSP 250
                    EP KP+ + F G G+TLG S+ +            N  T T T   S+P+ 
Sbjct: 273 INNHNQDYVEPAKPKYVAFSGGGQTLGSSSTSTNNNNNNNNNNNNRATTTSTTTTSTPNV 332

Query: 251 SAGLVVDDSLPSTSIQLRLADGTRMVAHFNYHHTISDVRAFIDASRPGGSRNYQLQLMGF 267
           S+ + VD S P+T++Q+RLA+G+R+   FN+ HT+ DV  +I++S  G ++++ L L GF
Sbjct: 333 SS-INVDQSQPTTTVQIRLANGSRLSTTFNHSHTLQDVINYINSS-SGSNQSFDL-LTGF 392

[Close]

BLAST of Carg25908-RA vs. ExPASy TrEMBL
Match: A0A6J1EN72 (plant UBX domain-containing protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111434111 PE=4 SV=1)

HSP 1 Score: 511.9 bits (1317), Expect = 1.6e-141
Identity = 264/299 (88.29%), Postives = 266/299 (88.96%), Query Frame = 0


Query: 1   MASRDEKPSKPSSSRTGGIRTLSDLNRRSPDSVGDPDAPQEYYTGGEKSGMLVQDPTKGN 60
           MASRDEKPSKPSSSRTGGIRTLSDLNRRSPDSVGDPDAPQEYYTGGEKSGMLVQDPTKGN
Sbjct: 1   MASRDEKPSKPSSSRTGGIRTLSDLNRRSPDSVGDPDAPQEYYTGGEKSGMLVQDPTKGN 60

Query: 61  DVDSLFNHARQMGAVEGPIDHARSSTSSSFTGTGRLLTGETVRSAPDQPENVVHNIVFWS 120
           DVDSLFNHARQMGAVEGPIDHARSSTSSSFTGTGRLLTGETVRSAPDQPEN+VHNIVFWS
Sbjct: 61  DVDSLFNHARQMGAVEGPIDHARSSTSSSFTGTGRLLTGETVRSAPDQPENLVHNIVFWS 120

Query: 121 NGFTVNDSPLRRLDDPENASFLE--------------------------------EPEKP 180
           NGFTVNDSPLRRLDDPENASFLE                                EPEKP
Sbjct: 121 NGFTVNDSPLRRLDDPENASFLESIRKSECPRELEPADRRSSVHVNLIRRMEEYREPEKP 180

Query: 181 RLPFQGVGRTLGGSAPANEPTATPTDVNSSPSPSAGLVVDDSLPSTSIQLRLADGTRMVA 240
           RLPFQGVGRTLGGSAPANEPTATPTDVNSSPSPSAGLVVDDSLPSTSIQLRLADGTRMVA
Sbjct: 181 RLPFQGVGRTLGGSAPANEPTATPTDVNSSPSPSAGLVVDDSLPSTSIQLRLADGTRMVA 240

Query: 241 HFNYHHTISDVRAFIDASRPGGSRNYQLQLMGFPPKLLNDLTRTIEQAGLANSVVIQKF 268
           HFNYHHTISDVRAFIDASRP G+RNYQLQLMGFPPKLLNDLTRTIEQAGLANSVVIQKF
Sbjct: 241 HFNYHHTISDVRAFIDASRPEGARNYQLQLMGFPPKLLNDLTRTIEQAGLANSVVIQKF 299

[Close]

BLAST of Carg25908-RA vs. ExPASy TrEMBL
Match: A0A6J1KLQ3 (plant UBX domain-containing protein 4-like OS=Cucurbita maxima OX=3661 GN=LOC111495698 PE=4 SV=1)

HSP 1 Score: 501.1 bits (1289), Expect = 2.8e-138
Identity = 260/299 (86.96%), Postives = 262/299 (87.63%), Query Frame = 0


Query: 1   MASRDEKPSKPSSSRTGGIRTLSDLNRRSPDSVGDPDAPQEYYTGGEKSGMLVQDPTKGN 60
           MASRDEKPSKP SSRTGGIRTLSDLNRRSPDSVGDPDAPQEYYTGGEKSGMLVQDPTKGN
Sbjct: 1   MASRDEKPSKPCSSRTGGIRTLSDLNRRSPDSVGDPDAPQEYYTGGEKSGMLVQDPTKGN 60

Query: 61  DVDSLFNHARQMGAVEGPIDHARSSTSSSFTGTGRLLTGETVRSAPDQPENVVHNIVFWS 120
           DVDSLFNHARQMGAVEGPIDHARSSTSSSFTGTGRLLTGETVRSAPDQPENVVHNIVFWS
Sbjct: 61  DVDSLFNHARQMGAVEGPIDHARSSTSSSFTGTGRLLTGETVRSAPDQPENVVHNIVFWS 120

Query: 121 NGFTVNDSPLRRLDDPENASFLE--------------------------------EPEKP 180
           NGFTVNDSPLRRLDDPENASFLE                                EPEKP
Sbjct: 121 NGFTVNDSPLRRLDDPENASFLESIRKSECPRELEPADRRSSVHVNLIRRMEEYREPEKP 180

Query: 181 RLPFQGVGRTLGGSAPANEPTATPTDVNSSPSPSAGLVVDDSLPSTSIQLRLADGTRMVA 240
           RLPFQGVGRTLGG APANEPTAT TDVNSSPS SAG VVDDSLPSTSIQLRLADGTRMVA
Sbjct: 181 RLPFQGVGRTLGGGAPANEPTATLTDVNSSPSASAGPVVDDSLPSTSIQLRLADGTRMVA 240

Query: 241 HFNYHHTISDVRAFIDASRPGGSRNYQLQLMGFPPKLLNDLTRTIEQAGLANSVVIQKF 268
           HFNYHHTISDVRAFIDASRPGG+RNYQLQLMGFPPKLL+DLTRTIEQAGLANSVVIQKF
Sbjct: 241 HFNYHHTISDVRAFIDASRPGGARNYQLQLMGFPPKLLSDLTRTIEQAGLANSVVIQKF 299

[Close]

BLAST of Carg25908-RA vs. ExPASy TrEMBL
Match: A0A0A0M3Q0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G701220 PE=4 SV=1)

HSP 1 Score: 483.4 bits (1243), Expect = 6.1e-133
Identity = 248/302 (82.12%), Postives = 263/302 (87.09%), Query Frame = 0


Query: 1   MASRDEKPSKPSSSRTGGIRTLSDLNRRSPDSVGDPDAPQEYYTGGEKSGMLVQDPTKGN 60
           MASRDEKPSKPSSSRTGGIRTLSDLNRRSPDSVGDPD+PQEYYTGGEKSGMLVQDPTKGN
Sbjct: 1   MASRDEKPSKPSSSRTGGIRTLSDLNRRSPDSVGDPDSPQEYYTGGEKSGMLVQDPTKGN 60

Query: 61  DVDSLFNHARQMGAVEGPIDHARSSTSSSFTGTGRLLTGETVRSAPDQPENVVHNIVFWS 120
           DVDSLFN ARQMGAVEGPIDHARSS SSSFTGTGR+L+GETVRSAPDQPE++VHNIVFWS
Sbjct: 61  DVDSLFNQARQMGAVEGPIDHARSSGSSSFTGTGRVLSGETVRSAPDQPESIVHNIVFWS 120

Query: 121 NGFTVNDSPLRRLDDPENASFLE--------------------------------EPEKP 180
           NGFTVN+ PLRRLDDPEN+SFLE                                EPEKP
Sbjct: 121 NGFTVNEGPLRRLDDPENSSFLESIRKSECPRELEPADRRSSVHVNLIRRMEEYREPEKP 180

Query: 181 RLPFQGVGRTLGGSAP---ANEPTATPTDVNSSPSPSAGLVVDDSLPSTSIQLRLADGTR 240
           RLPFQGVGRTLGGSAP   ANEPTATPTDVNSSPSPSAGL+VD+SLPSTSIQLRLADGTR
Sbjct: 181 RLPFQGVGRTLGGSAPSQAANEPTATPTDVNSSPSPSAGLIVDESLPSTSIQLRLADGTR 240

Query: 241 MVAHFNYHHTISDVRAFIDASRPGGSRNYQLQLMGFPPKLLNDLTRTIEQAGLANSVVIQ 268
           MV+HFNY HTISD+RAFIDASRPGG+RNYQLQLMGFPPKLL+D+T+TIEQAGLANSVVIQ
Sbjct: 241 MVSHFNYQHTISDIRAFIDASRPGGARNYQLQLMGFPPKLLSDVTQTIEQAGLANSVVIQ 300

[Close]

BLAST of Carg25908-RA vs. ExPASy TrEMBL
Match: A0A5A7TIL3 (Plant UBX domain-containing protein 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G00810 PE=4 SV=1)

HSP 1 Score: 480.7 bits (1236), Expect = 3.9e-132
Identity = 247/302 (81.79%), Postives = 261/302 (86.42%), Query Frame = 0


Query: 1   MASRDEKPSKPSSSRTGGIRTLSDLNRRSPDSVGDPDAPQEYYTGGEKSGMLVQDPTKGN 60
           MASRD+KPSKPSSSRTGGIRTLSDLNRRSPDSVGDPD PQEYYTGGEKSGMLVQDPTKGN
Sbjct: 1   MASRDDKPSKPSSSRTGGIRTLSDLNRRSPDSVGDPDGPQEYYTGGEKSGMLVQDPTKGN 60

Query: 61  DVDSLFNHARQMGAVEGPIDHARSSTSSSFTGTGRLLTGETVRSAPDQPENVVHNIVFWS 120
           DVDSLFN ARQMGAVEGPIDHARSS SSSFTGTGRLL+GETVRSAPDQPE++VHNIVFWS
Sbjct: 61  DVDSLFNQARQMGAVEGPIDHARSSGSSSFTGTGRLLSGETVRSAPDQPESIVHNIVFWS 120

Query: 121 NGFTVNDSPLRRLDDPENASFLE--------------------------------EPEKP 180
           NGFTVND PLRRLDDPEN+SFLE                                EPEKP
Sbjct: 121 NGFTVNDGPLRRLDDPENSSFLESIRKSECPRELEPADRRSSVHVNLIRRMEEYREPEKP 180

Query: 181 RLPFQGVGRTLGGSAP---ANEPTATPTDVNSSPSPSAGLVVDDSLPSTSIQLRLADGTR 240
           RLPFQGVGRTLGG+AP   AN PTATPTDVNSSPSPSAGL+VD+SLPSTSIQLRLADGTR
Sbjct: 181 RLPFQGVGRTLGGTAPSQAANGPTATPTDVNSSPSPSAGLIVDESLPSTSIQLRLADGTR 240

Query: 241 MVAHFNYHHTISDVRAFIDASRPGGSRNYQLQLMGFPPKLLNDLTRTIEQAGLANSVVIQ 268
           MV+HFNY HTISD+RAFIDASRPGG+RNYQLQLMGFPPKLL+D+T+TIEQAGLANSVVIQ
Sbjct: 241 MVSHFNYQHTISDIRAFIDASRPGGARNYQLQLMGFPPKLLSDVTQTIEQAGLANSVVIQ 300

[Close]

BLAST of Carg25908-RA vs. ExPASy TrEMBL
Match: A0A1S3C997 (plant UBX domain-containing protein 4 OS=Cucumis melo OX=3656 GN=LOC103498242 PE=4 SV=1)

HSP 1 Score: 480.7 bits (1236), Expect = 3.9e-132
Identity = 247/302 (81.79%), Postives = 261/302 (86.42%), Query Frame = 0


Query: 1   MASRDEKPSKPSSSRTGGIRTLSDLNRRSPDSVGDPDAPQEYYTGGEKSGMLVQDPTKGN 60
           MASRD+KPSKPSSSRTGGIRTLSDLNRRSPDSVGDPD PQEYYTGGEKSGMLVQDPTKGN
Sbjct: 1   MASRDDKPSKPSSSRTGGIRTLSDLNRRSPDSVGDPDGPQEYYTGGEKSGMLVQDPTKGN 60

Query: 61  DVDSLFNHARQMGAVEGPIDHARSSTSSSFTGTGRLLTGETVRSAPDQPENVVHNIVFWS 120
           DVDSLFN ARQMGAVEGPIDHARSS SSSFTGTGRLL+GETVRSAPDQPE++VHNIVFWS
Sbjct: 61  DVDSLFNQARQMGAVEGPIDHARSSGSSSFTGTGRLLSGETVRSAPDQPESIVHNIVFWS 120

Query: 121 NGFTVNDSPLRRLDDPENASFLE--------------------------------EPEKP 180
           NGFTVND PLRRLDDPEN+SFLE                                EPEKP
Sbjct: 121 NGFTVNDGPLRRLDDPENSSFLESIRKSECPRELEPADRRSSVHVNLIRRMEEYREPEKP 180

Query: 181 RLPFQGVGRTLGGSAP---ANEPTATPTDVNSSPSPSAGLVVDDSLPSTSIQLRLADGTR 240
           RLPFQGVGRTLGG+AP   AN PTATPTDVNSSPSPSAGL+VD+SLPSTSIQLRLADGTR
Sbjct: 181 RLPFQGVGRTLGGTAPSQAANGPTATPTDVNSSPSPSAGLIVDESLPSTSIQLRLADGTR 240

Query: 241 MVAHFNYHHTISDVRAFIDASRPGGSRNYQLQLMGFPPKLLNDLTRTIEQAGLANSVVIQ 268
           MV+HFNY HTISD+RAFIDASRPGG+RNYQLQLMGFPPKLL+D+T+TIEQAGLANSVVIQ
Sbjct: 241 MVSHFNYQHTISDIRAFIDASRPGGARNYQLQLMGFPPKLLSDVTQTIEQAGLANSVVIQ 300

[Close]

BLAST of Carg25908-RA vs. TAIR 10
Match: AT4G04210.1 (plant UBX domain containing protein 4 )

HSP 1 Score: 352.8 bits (904), Expect = 2.4e-97
Identity = 189/306 (61.76%), Postives = 224/306 (73.20%), Query Frame = 0


Query: 1   MASRDEKPSKPSSSRTGGIRTLSDLNRRS-PDSVGDPDAPQEYYTGGEKSGMLVQDPTKG 60
           M+S+D+KPSKPSSSR GGIRTLSDLNRRS PDS  D D PQEYYTGGEKSGMLVQDP+K 
Sbjct: 1   MSSKDKKPSKPSSSR-GGIRTLSDLNRRSGPDSDSDSDGPQEYYTGGEKSGMLVQDPSKK 60

Query: 61  NDVDSLFNHARQMGAVEGPIDHARSSTSSSFTGTGRLLTGETVRSAPDQPENVVHNIVFW 120
           +DVD +FN ARQ+GAVEGP++   S  S SFTGTGRLL+GE V +   QPE VVHNIVFW
Sbjct: 61  DDVDEIFNQARQLGAVEGPLEPPPS--SRSFTGTGRLLSGENVPTGNQQPEPVVHNIVFW 120

Query: 121 SNGFTVNDSPLRRLDDPENASFLE--------------------------------EPEK 180
           SNGFT++D PLR+LDDPENASFLE                                E +K
Sbjct: 121 SNGFTIDDGPLRKLDDPENASFLESIRKSECPKELEPADRRAPVHVNLMRKEEKCPERQK 180

Query: 181 PRLPFQGVGRTLGGSAPAN------EPTATPTDVNSSPSPSAGLVVDDSLPSTSIQLRLA 240
            R+ FQGVGRTLGGS   +       P + P  + + P+PS  LV+D+++P+TSIQLRLA
Sbjct: 181 RRVSFQGVGRTLGGSNEGSGSSSPVAPDSAPIPIQTEPAPSQSLVIDETVPTTSIQLRLA 240

Query: 241 DGTRMVAHFNYHHTISDVRAFIDASRPGGSRNYQLQLMGFPPKLLNDLTRTIEQAGLANS 268
           DGTR+VA FN+HHT++D+R FID+SRPG S NYQLQ MGFPPK L DLT+TIE+AGLANS
Sbjct: 241 DGTRLVAKFNHHHTVNDIRGFIDSSRPGASLNYQLQTMGFPPKPLTDLTQTIEEAGLANS 300

[Close]

BLAST of Carg25908-RA vs. TAIR 10
Match: AT4G22150.1 (plant UBX domain-containing protein 3 )

HSP 1 Score: 340.1 bits (871), Expect = 1.6e-93
Identity = 186/304 (61.18%), Postives = 223/304 (73.36%), Query Frame = 0


Query: 1   MASRDEKPSKPSSSRTGGIRTLSDLNRRS-PDSVGDPDAPQEYYTGGEKSGMLVQDPT-- 60
           M+S+D+K SKP+S RTGGIRTLSDLNRRS PDS  D D PQEY+TGGEKSGMLVQDPT  
Sbjct: 66  MSSKDKKLSKPTSGRTGGIRTLSDLNRRSEPDSDSDSDGPQEYFTGGEKSGMLVQDPTKE 125

Query: 61  -KGNDVDSLFNHARQMGAVEGPIDHARSSTSSSFTGTGRLLTGETVRSAPDQPENVVHNI 120
            K +DVD +FN ARQ+GAVEGP++H   S+S SFTGTGRLL+GE+V +A  QPE V+HNI
Sbjct: 126 PKHDDVDEIFNQARQLGAVEGPLEH--PSSSRSFTGTGRLLSGESVPTALQQPEPVIHNI 185

Query: 121 VFWSNGFTVNDSPLRRLDDPENASFLE--------------------------------E 180
           +FWSNGFTV+D PLR+LDDPENASFL+                                E
Sbjct: 186 IFWSNGFTVDDGPLRKLDDPENASFLDSIRKSECPKELEPVDKRAPVHVNLMRRDEKCPE 245

Query: 181 PEKPRLPFQGVGRTLGGSAPANEPT-ATPTDVNSSPSPSAGLVVDDSLPSTSIQLRLADG 240
            EK ++ FQGVGRTLGG++ +   + +  TDV +  SP   LVVD++LPSTSIQLRLADG
Sbjct: 246 KEKLKVSFQGVGRTLGGASSSTASSQSNLTDVAAVQSPLQSLVVDETLPSTSIQLRLADG 305

Query: 241 TRMVAHFNYHHTISDVRAFIDASRPGGSRNYQLQLMGFPPKLLNDLTRTIEQAGLANSVV 268
           TRMVA FN HHT++D+R FI+ SRPG   NY LQ+MGFPPK L D ++TIEQAGLA+SVV
Sbjct: 306 TRMVAKFNNHHTVNDIRGFIEFSRPGNPNNYTLQVMGFPPKPLTDPSQTIEQAGLASSVV 365

[Close]

BLAST of Carg25908-RA vs. TAIR 10
Match: AT4G15410.1 (serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B prime gamma )

HSP 1 Score: 292.4 bits (747), Expect = 3.8e-79
Identity = 165/306 (53.92%), Postives = 201/306 (65.69%), Query Frame = 0


Query: 6   EKPSKPSSSRT----GGIRTLSDLNRRSPDSVG-DPDAPQEYYTGGEKSGMLVQDPTKGN 65
           E PS   SSR+    G IRT +DLNR   D  G D D   EYYTGG+KSGM+VQDP K  
Sbjct: 118 ENPSGIRSSRSRQHAGNIRTFADLNRSPADGEGSDSDEANEYYTGGQKSGMMVQDPKKVK 177

Query: 66  DVDSLFNHARQMGAVEGPIDHARSSTSSSFTGTGRLLTGETVRSAP-----DQPENVVHN 125
           DVD LF+ ARQ  AV+ P++ +RS+ S+SFTG  RLL+GE V S+P     +QP+ ++H 
Sbjct: 178 DVDELFDQARQ-SAVDRPVEPSRSA-STSFTGAARLLSGEAVSSSPQQQQQEQPQRIMHT 237

Query: 126 IVFWSNGFTVNDSPLRRLDDPENASFLE-------------------------------- 185
           I FW NGFTVND PLR   DPENA+F+                                 
Sbjct: 238 ITFWLNGFTVNDGPLRGFSDPENAAFMNSISRSECPSELEPADKKIPVHVDLVRRGENFT 297

Query: 186 EPEKPRLPFQGVGRTLG--GSAPANEPTATPTDVNSSPSPSAGLVVDDSLPSTSIQLRLA 245
           EP KP+ PFQGVGRTLG  GS  ++ P A+   +N +P+PS GLVVD + P+TSIQLRLA
Sbjct: 298 EPPKPKNPFQGVGRTLGASGSGSSSAPQASSAPMNVAPAPSRGLVVDPAAPTTSIQLRLA 357

Query: 246 DGTRMVAHFNYHHTISDVRAFIDASRPGGSRNYQLQLMGFPPKLLNDLTRTIEQAGLANS 268
           DGTR+V+ FN HHT+ DVR FIDASRPGGS+ YQL  MGFPPK L +L +TIEQAG+AN+
Sbjct: 358 DGTRLVSRFNNHHTVRDVRGFIDASRPGGSKEYQLLTMGFPPKQLTELDQTIEQAGIANA 417

[Close]

BLAST of Carg25908-RA vs. TAIR 10
Match: AT3G21660.1 (UBX domain-containing protein )

HSP 1 Score: 155.2 bits (391), Expect = 7.3e-38
Identity = 91/204 (44.61%), Postives = 124/204 (60.78%), Query Frame = 0


Query: 82  ARSSTSSSFTGTGRLLTGET------VRSAPDQP-ENVVHNIVFWSNGFTVNDSPLRRLD 141
           A+ S       + ++L+GET       +   DQP E V + +  W NGFTV+D P + LD
Sbjct: 232 AKESAIERSEQSSKVLSGETDSAELQEQQQEDQPYEVVTYTVTIWRNGFTVDDDPFKSLD 291

Query: 142 DPENASFLE-EPEKPRLPFQGVGRTLGGSA---------PANEPTATPTDVNSSPSPS-A 201
           DPENA+FLE  PE  +       R+   S+           +E T+T   + ++  PS +
Sbjct: 292 DPENAAFLEYMPEDNKFGVPTTTRSTSCSSQTHQELQTLAGSESTSTEPPLTTTQPPSMS 351

Query: 202 GLVVDDSLPSTSIQLRLADGTRMVAHFNYHHTISDVRAFIDASRPGGSRNYQLQLMGFPP 261
            LVVD + P+TSIQL LAD TR+V  FN HHTI D+R FID SRP GS++YQL +MG PP
Sbjct: 352 SLVVDPAAPTTSIQLILADSTRIVTQFNTHHTIRDIRCFIDTSRPDGSKDYQLLIMGSPP 411

Query: 262 KLLNDLTRTIEQAGLANSVVIQKF 268
             L+D  +TIE+AG+ANSV++QKF
Sbjct: 412 TPLSDFDQTIEKAGIANSVLVQKF 435

The following BLAST results are available for this feature:

BLAST of Carg25908-RA vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7032424.1	8.1e-148	100.00	Plant UBX domain-containing protein 3 [Cucurbita argyrosperma subsp. argyrosperm...	[more]
KAG6583775.1	7.8e-143	89.30	Plant UBX domain-containing protein 4, partial [Cucurbita argyrosperma subsp. so...	[more]
XP_023519023.1	3.9e-142	88.63	plant UBX domain-containing protein 4-like [Cucurbita pepo subsp. pepo]	[more]
XP_022927190.1	3.3e-141	88.29	plant UBX domain-containing protein 4-like [Cucurbita moschata]	[more]
XP_023001630.1	5.8e-138	86.96	plant UBX domain-containing protein 4-like [Cucurbita maxima]	[more]

BLAST of Carg25908-RA vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RWU7	3.3e-96	61.76	Plant UBX domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=PUX4 PE...	[more]
Q9SUG6	2.2e-92	61.18	Plant UBX domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=PUX3 PE...	[more]
Q7Y175	5.4e-78	53.92	Plant UBX domain-containing protein 5 OS=Arabidopsis thaliana OX=3702 GN=PUX5 PE...	[more]
F4IXN6	1.0e-36	44.61	Plant UBX domain-containing protein 6 OS=Arabidopsis thaliana OX=3702 GN=PUX6 PE...	[more]
Q54BQ5	2.6e-32	34.05	NSFL1 cofactor p47 homolog OS=Dictyostelium discoideum OX=44689 GN=nsfl1c PE=3 S...	[more]

BLAST of Carg25908-RA vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EN72	1.6e-141	88.29	plant UBX domain-containing protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1KLQ3	2.8e-138	86.96	plant UBX domain-containing protein 4-like OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A0A0M3Q0	6.1e-133	82.12	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G701220 PE=4 SV=1	[more]
A0A5A7TIL3	3.9e-132	81.79	Plant UBX domain-containing protein 4 OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3C997	3.9e-132	81.79	plant UBX domain-containing protein 4 OS=Cucumis melo OX=3656 GN=LOC103498242 PE...	[more]

BLAST of Carg25908-RA vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G04210.1	2.4e-97	61.76	plant UBX domain containing protein 4	[more]
AT4G22150.1	1.6e-93	61.18	plant UBX domain-containing protein 3	[more]
AT4G15410.1	3.8e-79	53.92	serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B prime gamma	[more]
AT3G21660.1	7.3e-38	44.61	UBX domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012989	SEP domain	SMART	SM00553	faf_3	coord: 108..169 e-value: 2.0E-13 score: 60.6
IPR012989	SEP domain	PFAM	PF08059	SEP	coord: 116..151 e-value: 4.0E-10 score: 40.1
IPR012989	SEP domain	PROSITE	PS51399	SEP	coord: 111..187 score: 18.860378
IPR001012	UBX domain	SMART	SM00166	ubx_3	coord: 188..267 e-value: 5.2E-4 score: 29.2
IPR001012	UBX domain	PFAM	PF00789	UBX	coord: 193..266 e-value: 2.3E-15 score: 56.5
IPR001012	UBX domain	PROSITE	PS50033	UBX	coord: 189..266 score: 18.191881
None	No IPR available	GENE3D	3.10.20.90		coord: 182..267 e-value: 9.1E-28 score: 98.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 139..185
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..63
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 12..28
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 164..185
None	No IPR available	PANTHER	PTHR23333:SF29	PLANT UBX DOMAIN-CONTAINING PROTEIN 5	coord: 3..143 coord: 144..267
None	No IPR available	PANTHER	PTHR23333	UBX DOMAIN CONTAINING PROTEIN	coord: 3..143 coord: 144..267
None	No IPR available	CDD	cd01770	UBX_UBXN2	coord: 195..266 e-value: 6.05584E-38 score: 126.142
IPR036241	NSFL1 cofactor p47, SEP domain superfamily	GENE3D	3.30.420.210	SEP domain	coord: 110..158 e-value: 3.6E-13 score: 51.5
IPR036241	NSFL1 cofactor p47, SEP domain superfamily	SUPERFAMILY	102848	NSFL1 (p97 ATPase) cofactor p47, SEP domain	coord: 103..165
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 152..265

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg25908	Carg25908	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg25908-RA:3	Carg25908-RA:3	exon
Carg25908-RA:2	Carg25908-RA:2	exon
Carg25908-RA:1	Carg25908-RA:1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg25908-RA:cds	Carg25908-RA:cds_3	CDS
Carg25908-RA:cds	Carg25908-RA:cds_2	CDS
Carg25908-RA:cds	Carg25908-RA:cds	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg25908-RA:five_prime_utr	Carg25908-RA:five_prime_utr	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg25908-RA	Carg25908-RA-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000045	autophagosome assembly
biological_process	GO:0007030	Golgi organization
biological_process	GO:0061025	membrane fusion
biological_process	GO:0031468	nuclear membrane reassembly
biological_process	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding
molecular_function	GO:0043130	ubiquitin binding