Carg24881-RA (mRNA) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg24881-RA
Type	mRNA
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	fatty-acid-binding protein 1-like
Location	Carg_Chr08: 1996392 .. 1999588 (+)
Sequence length	918
RNA-Seq Expression	Carg24881-RA
Synteny	Carg24881-RA

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATTTTTTTTCCTTCCTAAAAAGACATTGTTGTCTATCAGGCCGCCAAAAAGAAAATGGTCTCTCTCCGATTTCCATTCTCGTTTCCTCAGCCGCCAAAGCTTCCACGCCATGGCTTTCTCCGCCCCTCCTACGCCGTCGTCGCGGCCGGCGGCGCTGCGGCAGCAGCCGGATTCGTCGCTGTAACTATAAACTCGACGAACCAACAATCCCCATTTCTCGAAAGTGCATTAAATTCGCTCTTCCGAAGTCATTCATCGCCCCTATGGGCTTCTCTATCTCTGGCGGACAATTCAACCACCTCTTCAGTTGTTGACTCCAAAACTGGAATGTCATTTCCGTCAGTAATCGGAGACTCTCAGCAGCTTCTCGGAATTGGGTTGCGGAGAAAGGCGATTTTGGGACTGAAGAATATCAATGTGTATGCATATGGTATGTTAATCATTCCACATTTCCACTTTTAAGCGAGCTTTCTAAATTTTGATTGAATGTTGAACTTATGCTGATTGAATGAAGAGATCCACATTTGTGAATCGTATTGGATTTTCAGTATCAGGAAGATCGTAAAATAGTATTGATTATTAATGATCTAGGGCTTTGGGAGACTGTTAAAATCTGTTCTTAATAATGCCACTGGATGGCCCATCCAAAGTTTTATGTTATTTCCCACTTGAAGTCATGATTTGAATTTGAAAGTTGTTTACATCTTCAATAATTCTCAAAAAAAAGATCAAACAAAGCGAAGAACAAAGGAAAACAGATAGAATGTTTCAAAAAAGGAAACAAAAGTGAGTGGAACATGATAAGTTCCAGTTCAATCAGATCATCTTCTTGATGACTATGATGATAAGCTGTAGATTGATTGCTTCTAACTCAAAGGGATTCATTTGTGCTTCCAATTGATATCAGAAATGAACTCAGCCTAGACTTCAAATTTATGCTAACCTTCAACATCTTATAGTTCTAGCTTTGCCCCAAATCTACCCAGGAGTTCGTTCATTTTAAGACATAGTTTGGAAAAAACAATGGAATGAACTTCCATTGGGTTGAAGATGGAAATAGTGGGTGGTTGAGATTCGCCCTAGTTCATGAGTTACAATCTTTGTTAAAAGATAAACTCGGTATGTTATTGTAACGGCCCAAGTTTTCCGCTAGCAGATATTGTCCTCTTTAAGCTTTCCCTTTCGAACTTCCCCTCAAGGTTTTTAGAATGCGTCTACTAGGAAGAGGTTTTCATACACTCATAAAGAATGTTTCGTTCCTCTTTCCAACCGATGTGGGATCTCACAATCCACCCCCCTTCGGGGCACAGCATCCTCGCTGGCACACCACCCGATGTCTGTCTCTAACACCATTTGTAATGGCTCAAGCCCGCCGCTAACAAATATTGTCCTCTTTGGGCTTTCTCTTTCGGGCTTCCCCTCAAGGTTTTTAAAATGTGTCTACCAAGGAGAGGTTTCCACACTCTTATAAAGAATGTTTTGTTTCCCTCTCCAACCAATATAGGATCTCACAATCCACTCCCCTTCGAGACTCAGCGTCCTCGCTGGCACACCACCCAGTGTCTGTCTCTAACACCATTTGTAATGGTTCGAGCCCACCACTAACAAATATTGTCCTCTTTAGGCTTTCCCTTTCGGGCTTCCCCTCTAGGTTTTTAAAACGCGTCTAATAGGGAGAGGTTTCCACACCTTCATAAAGAATGCTTCGTTCTCTTCCCCAACTAATGTAGAACCTCACGATTATATTTTGAAATCCGAGATGGAAGGGTCGATATAATTTCTATCTTTGTGATATTGAAAATGTTTCCATGTTAAGCTTACTCAAATGATTGGGTGTAGGTGTTTATGCCGATAACAATGACATAAAAGAATCACTGAGTGAGAAGTATGGAAAACTCAGTGTCTCTGAACTACAAGAAAAGAACTTTGATAAAGATATCATGGAAGCTGATATATGCATGACTGTTAGACTTCAAATAGTCTACGGAAGACTGAGCATCCGATCCGTTCGAAGTGCTTTTGAAGAATCGGTTGGAAGTCGACTCGAGAAGTTTGGGGGTTCAGACAACAAAGAATTGCTTCACAAGTGAGTCATGATCTTAGTGTAATATATGTAAAAGGCACACACTGTATACCCTACTCTTGATCCTTAAACCGTGCTTCTTTGCAGATTCACTTCCCAATTCAAAGACGAGTACAAAATACCTCGAGGGTCCGTGATCGATCTCTCCAAAGAACGAGGCCATGTCCTCCGCACAATCAGTGAGATTTCGATTCTTATTATTGCAATGATGAATTGTTCTATACATTATTTGTGGTGAAAGAGAAGGTAGTAGAGAAAGGAATAGAGGCTTCTAACGGTAAATTACATCCCACGAAGAATTACTTGAAAGGAGTAGTCCCACATTGACTAATTAAGAGGATGATCATGAGTTTATATGTGATGTCCCACATTGGTTGGGGAGGAGAACAAACCACCCTTTATAAGGGTGTGGAAACCTTCCCGGTGGATTTGGTGGCGGTCCCACATCAATTAAAGAAAGGAGTGCCGGCGAGGACGCTGGGCCCAGAAGGAGGGTGGATTGTGATGTCTCAAATTGGTTGGGGAGGAGAACAAACCACTCTTTATACGGGTGTGGAAACCTTCCTCTAGCAGACGCGTTTTAAAGCCTAAAGCCTTGAGAGGAAGCCCGAAAGGGAAAGCCCAAAGAGGGCAATATCTGCTAGCGGTAGATCTGGGTCCTTACACTGTAAGCAAGGAATACATCTCCATTGGTACGAGGTCTTTTGGGTAAACCAAAATCAAAGCCACGAGAGCATATACTCAAAGTGGACAATATCATACCATTATAGAGGGTTGTGATTCCTAACGTTACTTTATCCGCATGTCTTTGGTTTGTTAAAAACATGTCTGAATGCATCCGCTAACCAACTGATGAACACTTAGCTCGCTTGATTAAGAGATCGGAGGCCTGAATGACTCGAACAGATTAAAGAATAAAATATTTTTATTATGATTTTGTGCATTTATGTTTAAAATTTTTGCAGTTGATGGGAAGGAAGTGGGAAGCATAGAGAGCCAACTACTGTGCAGAGCCATTTTAGATCTGTATATTGGTGAACATCCATTTGATAAACAAGCCAAACAAGACATCAAACAAGCTTTAACTTCTATTCTTCACAACTAATATATATA

mRNA sequence

TATTTTTTTTCCTTCCTAAAAAGACATTGTTGTCTATCAGGCCGCCAAAAAGAAAATGGTCTCTCTCCGATTTCCATTCTCGTTTCCTCAGCCGCCAAAGCTTCCACGCCATGGCTTTCTCCGCCCCTCCTACGCCGTCGTCGCGGCCGGCGGCGCTGCGGCAGCAGCCGGATTCGTCGCTGTAACTATAAACTCGACGAACCAACAATCCCCATTTCTCGAAAGTGCATTAAATTCGCTCTTCCGAAGTCATTCATCGCCCCTATGGGCTTCTCTATCTCTGGCGGACAATTCAACCACCTCTTCAGTTGTTGACTCCAAAACTGGAATGTCATTTCCGTCAGTAATCGGAGACTCTCAGCAGCTTCTCGGAATTGGGTTGCGGAGAAAGGCGATTTTGGGACTGAAGAATATCAATGTGTATGCATATGGTGTTTATGCCGATAACAATGACATAAAAGAATCACTGAGTGAGAAGTATGGAAAACTCAGTGTCTCTGAACTACAAGAAAAGAACTTTGATAAAGATATCATGGAAGCTGATATATGCATGACTGTTAGACTTCAAATAGTCTACGGAAGACTGAGCATCCGATCCGTTCGAAGTGCTTTTGAAGAATCGGTTGGAAGTCGACTCGAGAAGTTTGGGGGTTCAGACAACAAAGAATTGCTTCACAAATTCACTTCCCAATTCAAAGACGAGTACAAAATACCTCGAGGGTCCGTGATCGATCTCTCCAAAGAACGAGGCCATGTCCTCCGCACAATCATTGATGGGAAGGAAGTGGGAAGCATAGAGAGCCAACTACTGTGCAGAGCCATTTTAGATCTGTATATTGGTGAACATCCATTTGATAAACAAGCCAAACAAGACATCAAACAAGCTTTAACTTCTATTCTTCACAACTAATATATATA

Coding sequence (CDS)

ATGGTCTCTCTCCGATTTCCATTCTCGTTTCCTCAGCCGCCAAAGCTTCCACGCCATGGCTTTCTCCGCCCCTCCTACGCCGTCGTCGCGGCCGGCGGCGCTGCGGCAGCAGCCGGATTCGTCGCTGTAACTATAAACTCGACGAACCAACAATCCCCATTTCTCGAAAGTGCATTAAATTCGCTCTTCCGAAGTCATTCATCGCCCCTATGGGCTTCTCTATCTCTGGCGGACAATTCAACCACCTCTTCAGTTGTTGACTCCAAAACTGGAATGTCATTTCCGTCAGTAATCGGAGACTCTCAGCAGCTTCTCGGAATTGGGTTGCGGAGAAAGGCGATTTTGGGACTGAAGAATATCAATGTGTATGCATATGGTGTTTATGCCGATAACAATGACATAAAAGAATCACTGAGTGAGAAGTATGGAAAACTCAGTGTCTCTGAACTACAAGAAAAGAACTTTGATAAAGATATCATGGAAGCTGATATATGCATGACTGTTAGACTTCAAATAGTCTACGGAAGACTGAGCATCCGATCCGTTCGAAGTGCTTTTGAAGAATCGGTTGGAAGTCGACTCGAGAAGTTTGGGGGTTCAGACAACAAAGAATTGCTTCACAAATTCACTTCCCAATTCAAAGACGAGTACAAAATACCTCGAGGGTCCGTGATCGATCTCTCCAAAGAACGAGGCCATGTCCTCCGCACAATCATTGATGGGAAGGAAGTGGGAAGCATAGAGAGCCAACTACTGTGCAGAGCCATTTTAGATCTGTATATTGGTGAACATCCATTTGATAAACAAGCCAAACAAGACATCAAACAAGCTTTAACTTCTATTCTTCACAACTAA

Protein sequence

MVSLRFPFSFPQPPKLPRHGFLRPSYAVVAAGGAAAAAGFVAVTINSTNQQSPFLESALNSLFRSHSSPLWASLSLADNSTTSSVVDSKTGMSFPSVIGDSQQLLGIGLRRKAILGLKNINVYAYGVYADNNDIKESLSEKYGKLSVSELQEKNFDKDIMEADICMTVRLQIVYGRLSIRSVRSAFEESVGSRLEKFGGSDNKELLHKFTSQFKDEYKIPRGSVIDLSKERGHVLRTIIDGKEVGSIESQLLCRAILDLYIGEHPFDKQAKQDIKQALTSILHN

Homology

[Close]

BLAST of Carg24881-RA vs. NCBI nr
Match: KAG7025526.1 (Fatty-acid-binding protein 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 548.9 bits (1413), Expect = 2.6e-152
Identity = 284/284 (100.00%), Postives = 284/284 (100.00%), Query Frame = 0


Query: 1   MVSLRFPFSFPQPPKLPRHGFLRPSYAVVAAGGAAAAAGFVAVTINSTNQQSPFLESALN 60
           MVSLRFPFSFPQPPKLPRHGFLRPSYAVVAAGGAAAAAGFVAVTINSTNQQSPFLESALN
Sbjct: 1   MVSLRFPFSFPQPPKLPRHGFLRPSYAVVAAGGAAAAAGFVAVTINSTNQQSPFLESALN 60

Query: 61  SLFRSHSSPLWASLSLADNSTTSSVVDSKTGMSFPSVIGDSQQLLGIGLRRKAILGLKNI 120
           SLFRSHSSPLWASLSLADNSTTSSVVDSKTGMSFPSVIGDSQQLLGIGLRRKAILGLKNI
Sbjct: 61  SLFRSHSSPLWASLSLADNSTTSSVVDSKTGMSFPSVIGDSQQLLGIGLRRKAILGLKNI 120

Query: 121 NVYAYGVYADNNDIKESLSEKYGKLSVSELQEKNFDKDIMEADICMTVRLQIVYGRLSIR 180
           NVYAYGVYADNNDIKESLSEKYGKLSVSELQEKNFDKDIMEADICMTVRLQIVYGRLSIR
Sbjct: 121 NVYAYGVYADNNDIKESLSEKYGKLSVSELQEKNFDKDIMEADICMTVRLQIVYGRLSIR 180

Query: 181 SVRSAFEESVGSRLEKFGGSDNKELLHKFTSQFKDEYKIPRGSVIDLSKERGHVLRTIID 240
           SVRSAFEESVGSRLEKFGGSDNKELLHKFTSQFKDEYKIPRGSVIDLSKERGHVLRTIID
Sbjct: 181 SVRSAFEESVGSRLEKFGGSDNKELLHKFTSQFKDEYKIPRGSVIDLSKERGHVLRTIID 240

Query: 241 GKEVGSIESQLLCRAILDLYIGEHPFDKQAKQDIKQALTSILHN 285
           GKEVGSIESQLLCRAILDLYIGEHPFDKQAKQDIKQALTSILHN
Sbjct: 241 GKEVGSIESQLLCRAILDLYIGEHPFDKQAKQDIKQALTSILHN 284

[Close]

BLAST of Carg24881-RA vs. NCBI nr
Match: KAG6593122.1 (Fatty-acid-binding protein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 545.4 bits (1404), Expect = 2.8e-151
Identity = 283/284 (99.65%), Postives = 283/284 (99.65%), Query Frame = 0


Query: 1   MVSLRFPFSFPQPPKLPRHGFLRPSYAVVAAGGAAAAAGFVAVTINSTNQQSPFLESALN 60
           MVSLRFPFSFPQPPKLPRHGFLRPSYAVVAAGGAAAAAGFVAVTINSTNQQSPFLESALN
Sbjct: 1   MVSLRFPFSFPQPPKLPRHGFLRPSYAVVAAGGAAAAAGFVAVTINSTNQQSPFLESALN 60

Query: 61  SLFRSHSSPLWASLSLADNSTTSSVVDSKTGMSFPSVIGDSQQLLGIGLRRKAILGLKNI 120
           SLFRSHSSPLWASLSLADNSTTSSVVDSKTGMSFPSVIGDSQQLLGIGLRRKAILGLKNI
Sbjct: 61  SLFRSHSSPLWASLSLADNSTTSSVVDSKTGMSFPSVIGDSQQLLGIGLRRKAILGLKNI 120

Query: 121 NVYAYGVYADNNDIKESLSEKYGKLSVSELQEKNFDKDIMEADICMTVRLQIVYGRLSIR 180
           NVYAYGVYADNNDIKESLSEKYGKLSVSELQEKNFDKDIMEADICMTVRLQIVYGRLSIR
Sbjct: 121 NVYAYGVYADNNDIKESLSEKYGKLSVSELQEKNFDKDIMEADICMTVRLQIVYGRLSIR 180

Query: 181 SVRSAFEESVGSRLEKFGGSDNKELLHKFTSQFKDEYKIPRGSVIDLSKERGHVLRTIID 240
           SVRSAFEESVGSRLEKFGGSDNKELLHKFTSQFKDEYKIPRGSVIDLSKERGHVLRTIID
Sbjct: 181 SVRSAFEESVGSRLEKFGGSDNKELLHKFTSQFKDEYKIPRGSVIDLSKERGHVLRTIID 240

Query: 241 GKEVGSIESQLLCRAILDLYIGEHPFDKQAKQDIKQALTSILHN 285
           GKEVGSIESQLLCRAILDLYIGE PFDKQAKQDIKQALTSILHN
Sbjct: 241 GKEVGSIESQLLCRAILDLYIGEDPFDKQAKQDIKQALTSILHN 284

[Close]

BLAST of Carg24881-RA vs. NCBI nr
Match: XP_022960127.1 (fatty-acid-binding protein 1-like [Cucurbita moschata])

HSP 1 Score: 544.3 bits (1401), Expect = 6.3e-151
Identity = 282/284 (99.30%), Postives = 283/284 (99.65%), Query Frame = 0


Query: 1   MVSLRFPFSFPQPPKLPRHGFLRPSYAVVAAGGAAAAAGFVAVTINSTNQQSPFLESALN 60
           MVSLRFPFSFPQPPKLPRHGFLRPSYAVVAAGGAAAAAGFVAVTINSTNQQSPFLESALN
Sbjct: 1   MVSLRFPFSFPQPPKLPRHGFLRPSYAVVAAGGAAAAAGFVAVTINSTNQQSPFLESALN 60

Query: 61  SLFRSHSSPLWASLSLADNSTTSSVVDSKTGMSFPSVIGDSQQLLGIGLRRKAILGLKNI 120
           SLFRSHSSPLWASLSLADNSTTSSVVDSKTGMSFPSVIGDSQQLLGIGLRRKAILG+KNI
Sbjct: 61  SLFRSHSSPLWASLSLADNSTTSSVVDSKTGMSFPSVIGDSQQLLGIGLRRKAILGVKNI 120

Query: 121 NVYAYGVYADNNDIKESLSEKYGKLSVSELQEKNFDKDIMEADICMTVRLQIVYGRLSIR 180
           NVYAYGVYADNNDIKESLSEKYGKLSVSELQEKNFDKDIMEADICMTVRLQIVYGRLSIR
Sbjct: 121 NVYAYGVYADNNDIKESLSEKYGKLSVSELQEKNFDKDIMEADICMTVRLQIVYGRLSIR 180

Query: 181 SVRSAFEESVGSRLEKFGGSDNKELLHKFTSQFKDEYKIPRGSVIDLSKERGHVLRTIID 240
           SVRSAFEESVGSRLEKFGGSDNKELLHKFTSQFKDEYKIPRGSVIDLSKERGHVLRTIID
Sbjct: 181 SVRSAFEESVGSRLEKFGGSDNKELLHKFTSQFKDEYKIPRGSVIDLSKERGHVLRTIID 240

Query: 241 GKEVGSIESQLLCRAILDLYIGEHPFDKQAKQDIKQALTSILHN 285
           GKEVGSIESQLLCRAILDLYIGE PFDKQAKQDIKQALTSILHN
Sbjct: 241 GKEVGSIESQLLCRAILDLYIGEDPFDKQAKQDIKQALTSILHN 284

[Close]

BLAST of Carg24881-RA vs. NCBI nr
Match: XP_023514703.1 (fatty-acid-binding protein 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 539.7 bits (1389), Expect = 1.6e-149
Identity = 280/284 (98.59%), Postives = 280/284 (98.59%), Query Frame = 0


Query: 1   MVSLRFPFSFPQPPKLPRHGFLRPSYAVVAAGGAAAAAGFVAVTINSTNQQSPFLESALN 60
           MVSLRFPFSFPQPPKLPRHGFLRPSYAVVAAGGAAAAAGFVAVTINSTNQQSPFLESA N
Sbjct: 1   MVSLRFPFSFPQPPKLPRHGFLRPSYAVVAAGGAAAAAGFVAVTINSTNQQSPFLESAFN 60

Query: 61  SLFRSHSSPLWASLSLADNSTTSSVVDSKTGMSFPSVIGDSQQLLGIGLRRKAILGLKNI 120
            LFRSH SPLWASLSLADNSTTSSVVDSKTGMSFPSVIGDSQQLLGIGLRRKAILGLKNI
Sbjct: 61  LLFRSHPSPLWASLSLADNSTTSSVVDSKTGMSFPSVIGDSQQLLGIGLRRKAILGLKNI 120

Query: 121 NVYAYGVYADNNDIKESLSEKYGKLSVSELQEKNFDKDIMEADICMTVRLQIVYGRLSIR 180
           NVYAYGVYADNNDIKESLSEKYGKLSVSELQEKNFDKDIMEADICMTVRLQIVYGRLSIR
Sbjct: 121 NVYAYGVYADNNDIKESLSEKYGKLSVSELQEKNFDKDIMEADICMTVRLQIVYGRLSIR 180

Query: 181 SVRSAFEESVGSRLEKFGGSDNKELLHKFTSQFKDEYKIPRGSVIDLSKERGHVLRTIID 240
           SVRSAFEESVGSRLEKFGGSDNKELLHKFTSQFKDEYKIPRGSVIDLSKERGHVLRTIID
Sbjct: 181 SVRSAFEESVGSRLEKFGGSDNKELLHKFTSQFKDEYKIPRGSVIDLSKERGHVLRTIID 240

Query: 241 GKEVGSIESQLLCRAILDLYIGEHPFDKQAKQDIKQALTSILHN 285
           GKEVGSIESQLLCRAILDLYIGE PFDKQAKQDIKQALTSILHN
Sbjct: 241 GKEVGSIESQLLCRAILDLYIGEDPFDKQAKQDIKQALTSILHN 284

[Close]

BLAST of Carg24881-RA vs. NCBI nr
Match: XP_023004140.1 (fatty-acid-binding protein 1 [Cucurbita maxima])

HSP 1 Score: 531.6 bits (1368), Expect = 4.3e-147
Identity = 276/284 (97.18%), Postives = 279/284 (98.24%), Query Frame = 0


Query: 1   MVSLRFPFSFPQPPKLPRHGFLRPSYAVVAAGGAAAAAGFVAVTINSTNQQSPFLESALN 60
           MVSLRFPFSFPQPPKLPRHGFLRPSYAVVAAGGAAAAAGFVAVTI STNQQSPFLESAL+
Sbjct: 1   MVSLRFPFSFPQPPKLPRHGFLRPSYAVVAAGGAAAAAGFVAVTIKSTNQQSPFLESALD 60

Query: 61  SLFRSHSSPLWASLSLADNSTTSSVVDSKTGMSFPSVIGDSQQLLGIGLRRKAILGLKNI 120
            LFRSHSSPLWASLSLA+NS TSSVVDSKTGMSFPSVIGDS QLLGIGLRRKAILGLKNI
Sbjct: 61  LLFRSHSSPLWASLSLAENSATSSVVDSKTGMSFPSVIGDSLQLLGIGLRRKAILGLKNI 120

Query: 121 NVYAYGVYADNNDIKESLSEKYGKLSVSELQEKNFDKDIMEADICMTVRLQIVYGRLSIR 180
           NVYAYGVYADNNDIKESLSEKYGKLSVSELQEKNFDKDIMEADICMTVRLQIVYGRLSIR
Sbjct: 121 NVYAYGVYADNNDIKESLSEKYGKLSVSELQEKNFDKDIMEADICMTVRLQIVYGRLSIR 180

Query: 181 SVRSAFEESVGSRLEKFGGSDNKELLHKFTSQFKDEYKIPRGSVIDLSKERGHVLRTIID 240
           SVRSAFEESVGSRLEKFGGSDNKELLHKFTSQFKDEYKIPRGSVIDLSKERGHVLRTIID
Sbjct: 181 SVRSAFEESVGSRLEKFGGSDNKELLHKFTSQFKDEYKIPRGSVIDLSKERGHVLRTIID 240

Query: 241 GKEVGSIESQLLCRAILDLYIGEHPFDKQAKQDIKQALTSILHN 285
           GKEVGSIES+LLCRAILDLYIGE PFDKQAKQDIKQALTSILHN
Sbjct: 241 GKEVGSIESELLCRAILDLYIGEDPFDKQAKQDIKQALTSILHN 284

[Close]

BLAST of Carg24881-RA vs. ExPASy Swiss-Prot
Match: Q9M1X2 (Fatty-acid-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=FAP1 PE=1 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 1.4e-79
Identity = 166/284 (58.45%), Postives = 207/284 (72.89%), Query Frame = 0


Query: 1   MVSLRFPFSFPQPPKLPR--HGFLRPSYAVVAAGGAAAAAGFVAVTINSTNQQSPFLESA 60
           MVS RFPFSF QPP+      GF   + AV    GAAAA   +A    S N   P LE A
Sbjct: 1   MVSFRFPFSFSQPPRATTSFSGFSISAVAVSVTVGAAAAGAAIAA---SRNPSHPILEWA 60

Query: 61  LNSLFRSHSSPLWASLSLADNSTTSSVVDSKTGMSFPSVIGDSQQLLGIGLRRKAILGLK 120
            +S  RS  SP W S++LAD     SVV+ KTG SFP+ IGDS++LLG+GLR+K++LGLK
Sbjct: 61  FSS-HRSSLSP-WGSITLAD----ESVVEPKTGFSFPASIGDSRRLLGVGLRKKSLLGLK 120

Query: 121 NINVYAYGVYADNNDIKESLSEKYGKLSVSELQ-EKNFDKDIMEADICMTVRLQIVYGRL 180
           NI+VYA+GVYAD +D+K+ + +KY  L  SE++  K+F  D+MEADI MT+RLQIVYG+L
Sbjct: 121 NIDVYAFGVYADCDDVKKLVGDKYANLPASEIRGNKSFMDDLMEADIKMTIRLQIVYGKL 180

Query: 181 SIRSVRSAFEESVGSRLEKFGGSDNKELLHKFTSQFKDEYKIPRGSVIDLSKERGHVLRT 240
           +IRSVR+AF+ESVG+RL+KFGGSDN ELL  FTS FKDEYKIPR S IDL+K+ GHVL  
Sbjct: 181 NIRSVRNAFQESVGNRLKKFGGSDNDELLQSFTSLFKDEYKIPRNSTIDLTKDPGHVLSV 240

Query: 241 IIDGKEVGSIESQLLCRAILDLYIGEHPFDKQAKQDIKQALTSI 282
            I+G  VGS++S LLCR+ILDLYIGE PFDK A++D      S+
Sbjct: 241 AIEGNHVGSVKSHLLCRSILDLYIGEEPFDKNAREDFLDNAASL 275

[Close]

BLAST of Carg24881-RA vs. ExPASy Swiss-Prot
Match: A0A2U7XUH7 (Chalcone isomerase-like protein 1 OS=Humulus lupulus OX=3486 GN=CHIL1 PE=1 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 7.1e-28
Identity = 70/206 (33.98%), Postives = 121/206 (58.74%), Query Frame = 0


Query: 79  NSTTSSVVDSKTGMSFPSVIGDSQQLLGIGLRRKAILGLKNINVYAYGVYADNNDIKESL 138
           +S T+  ++ KTG++FP  + D + L  +GLR+K++LG+  I V+ +G+YADN  +K  L
Sbjct: 11  SSNTAVHIEPKTGIAFPVKLDDGKSLNSVGLRKKSLLGM-GIKVFGFGLYADNEKLKNLL 70

Query: 139 SEKYGKLSVSELQEKNFDKDIMEADICMTVRLQIVYGRLSIRSVRSAFEESVGSRLEKF- 198
             K GK      +E    + +++ DI +T ++ I Y  L +   + AF E++G  + K  
Sbjct: 71  KLKIGKSPAKPTEE--MYQLVIDGDIGLTHKIVIAYSGLKMNMFKKAFSEALGESIMKLN 130

Query: 199 GGSDNKELLHKFTSQFKDEYKIPRGSVIDLSKERGHVLRTIIDGKEVGSIESQLLCRAIL 258
           GG  N+EL +K      D+ K+  GS +++SK  G+VL T + G+    +ES+LLCRA  
Sbjct: 131 GGRKNEELANKVLGPASDQIKLATGSEMEISKLPGYVLETKVHGELASRVESELLCRAYF 190

Query: 259 DLYIGEHPFD--KQAKQDIKQALTSI 282
            +Y+GE   +  K++K+   Q++ S+
Sbjct: 191 GIYLGEITMECYKESKEMFGQSMLSL 213

[Close]

BLAST of Carg24881-RA vs. ExPASy Swiss-Prot
Match: Q84RK2 (Fatty-acid-binding protein 2 OS=Arabidopsis thaliana OX=3702 GN=FAP2 PE=2 SV=2)

HSP 1 Score: 119.8 bits (299), Expect = 5.1e-26
Identity = 79/266 (29.70%), Postives = 135/266 (50.75%), Query Frame = 0


Query: 24  PSYAVVAAGGAAAAAGFVAVTINSTNQQSPFLESALNSLFRSHSSPLWASLSLADNSTTS 83
           PS  V++A G A   G   V +    +     E+  +   +      ++ LS      T 
Sbjct: 131 PSLNVMSANGLALPLGSNDVKLRENIEHRTCPENTEHRTCQVGCEE-YSGLSFQKLDWTR 190

Query: 84  SVVDSKTGMSFPSVI------GDSQQLLGIGLRRKAILGLKNINVYAYGVYADNNDIKES 143
             V+ +TG+ FP ++       +S+ L+  G R   I+ +K++ VYA+G Y   + + + 
Sbjct: 191 QSVEPRTGIEFPMLLKENASRSNSEVLVATGSRTMKIIRIKSLKVYAFGFYVHPSSVCQK 250

Query: 144 LSEKYGKLSVSELQE-KNFDKDIMEADICMTVRLQIVYGRLSIRSVRSAFEESVGSRLEK 203
           L  KY  +  S+L +  +  KD++  DI M+VRL + Y  L I +VR  FE+S+ +RL K
Sbjct: 251 LGRKYASVPASKLDKCDDLYKDLLREDIVMSVRLVVNYNGLKINTVRDVFEKSLRARLVK 310

Query: 204 FGGSDNKELLHKFTSQFKDEYKIPRGSVIDLSKERGHVLRTIIDGKEVGSIESQLLCRAI 263
                +   L+ F S F+ +  IP G++ID  +     L T I G  +G++ S+ LCRA 
Sbjct: 311 ANPKTDFNCLNDFGSFFRQDIPIPAGTIIDFRRTEDGQLITEIGGNLIGAVRSKDLCRAF 370

Query: 264 LDLYIGEHPFDKQAKQDIKQALTSIL 283
             +YIG+ P  +Q K++I + +  I+
Sbjct: 371 FGMYIGDVPVSEQTKEEIGRKVVGII 395

[Close]

BLAST of Carg24881-RA vs. ExPASy Swiss-Prot
Match: A2XNF0 (Chalcone--flavanone isomerase OS=Oryza sativa subsp. indica OX=39946 GN=CHI PE=2 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 5.4e-04
Identity = 53/209 (25.36%), Postives = 86/209 (41.15%), Query Frame = 0


Query: 91  GMSFPSVI-----GDSQQLLGIGLRRKAILGLKNINVYAYGVYADNNDIKESLSEKYGKL 150
           G+ FP V      G +  L G G+R   I G   I   A GVY +      +L++K+   
Sbjct: 11  GVVFPPVARPPGSGHAHFLAGAGVRGVEIAG-NFIKFTAIGVYLEEGAAVPALAKKWAGK 70

Query: 151 SVSEL-QEKNFDKDIMEADICMTVRLQIVYGRLSIRSVRSAFEESVGSRLEKFGGSDNKE 210
           S  EL  +  F +D++  D     R+ ++   L+         E+  +  +  G   + E
Sbjct: 71  SADELAADAAFFRDVVTGDFEKFTRVTMIL-PLTGEQYSDKVTENCVAAWKAAGVYTDAE 130

Query: 211 --LLHKFTSQFKDEYKIPRGSVIDLSKERGHVLRTIIDGKE---------VGSIESQLLC 270
                KF   FK     P  S++      G  + T+   K+           +IE++ LC
Sbjct: 131 GAAADKFKEAFKPHSFPPGASILFTHSPPG--VLTVAFSKDSSVPEGAVAAAAIENRALC 190

Query: 271 RAILDLYIGEHPFDKQAKQDIKQALTSIL 283
            A+LD  IGEH     AK+ I   ++ +L
Sbjct: 191 EAVLDSIIGEHGVSPAAKRSIAARVSQLL 215

[Close]

BLAST of Carg24881-RA vs. ExPASy Swiss-Prot
Match: Q84T92 (Chalcone--flavanone isomerase OS=Oryza sativa subsp. japonica OX=39947 GN=CHI PE=2 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 5.4e-04
Identity = 53/209 (25.36%), Postives = 86/209 (41.15%), Query Frame = 0


Query: 91  GMSFPSVI-----GDSQQLLGIGLRRKAILGLKNINVYAYGVYADNNDIKESLSEKYGKL 150
           G+ FP V      G +  L G G+R   I G   I   A GVY +      +L++K+   
Sbjct: 11  GVVFPPVARPPGSGHAHFLAGAGVRGVEIAG-NFIKFTAIGVYLEEGAAVPALAKKWAGK 70

Query: 151 SVSEL-QEKNFDKDIMEADICMTVRLQIVYGRLSIRSVRSAFEESVGSRLEKFGGSDNKE 210
           S  EL  +  F +D++  D     R+ ++   L+         E+  +  +  G   + E
Sbjct: 71  SADELAADAAFFRDVVTGDFEKFTRVTMIL-PLTGEQYSDKVTENCVAAWKAAGVYTDAE 130

Query: 211 --LLHKFTSQFKDEYKIPRGSVIDLSKERGHVLRTIIDGKE---------VGSIESQLLC 270
                KF   FK     P  S++      G  + T+   K+           +IE++ LC
Sbjct: 131 GAAADKFKEAFKPHSFPPGASILFTHSPPG--VLTVAFSKDSSVPEGAVAAAAIENRALC 190

Query: 271 RAILDLYIGEHPFDKQAKQDIKQALTSIL 283
            A+LD  IGEH     AK+ I   ++ +L
Sbjct: 191 EAVLDSIIGEHGVSPAAKRSIAARVSQLL 215

[Close]

BLAST of Carg24881-RA vs. ExPASy TrEMBL
Match: A0A6J1H6I3 (fatty-acid-binding protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111460966 PE=3 SV=1)

HSP 1 Score: 544.3 bits (1401), Expect = 3.1e-151
Identity = 282/284 (99.30%), Postives = 283/284 (99.65%), Query Frame = 0


Query: 1   MVSLRFPFSFPQPPKLPRHGFLRPSYAVVAAGGAAAAAGFVAVTINSTNQQSPFLESALN 60
           MVSLRFPFSFPQPPKLPRHGFLRPSYAVVAAGGAAAAAGFVAVTINSTNQQSPFLESALN
Sbjct: 1   MVSLRFPFSFPQPPKLPRHGFLRPSYAVVAAGGAAAAAGFVAVTINSTNQQSPFLESALN 60

Query: 61  SLFRSHSSPLWASLSLADNSTTSSVVDSKTGMSFPSVIGDSQQLLGIGLRRKAILGLKNI 120
           SLFRSHSSPLWASLSLADNSTTSSVVDSKTGMSFPSVIGDSQQLLGIGLRRKAILG+KNI
Sbjct: 61  SLFRSHSSPLWASLSLADNSTTSSVVDSKTGMSFPSVIGDSQQLLGIGLRRKAILGVKNI 120

Query: 121 NVYAYGVYADNNDIKESLSEKYGKLSVSELQEKNFDKDIMEADICMTVRLQIVYGRLSIR 180
           NVYAYGVYADNNDIKESLSEKYGKLSVSELQEKNFDKDIMEADICMTVRLQIVYGRLSIR
Sbjct: 121 NVYAYGVYADNNDIKESLSEKYGKLSVSELQEKNFDKDIMEADICMTVRLQIVYGRLSIR 180

Query: 181 SVRSAFEESVGSRLEKFGGSDNKELLHKFTSQFKDEYKIPRGSVIDLSKERGHVLRTIID 240
           SVRSAFEESVGSRLEKFGGSDNKELLHKFTSQFKDEYKIPRGSVIDLSKERGHVLRTIID
Sbjct: 181 SVRSAFEESVGSRLEKFGGSDNKELLHKFTSQFKDEYKIPRGSVIDLSKERGHVLRTIID 240

Query: 241 GKEVGSIESQLLCRAILDLYIGEHPFDKQAKQDIKQALTSILHN 285
           GKEVGSIESQLLCRAILDLYIGE PFDKQAKQDIKQALTSILHN
Sbjct: 241 GKEVGSIESQLLCRAILDLYIGEDPFDKQAKQDIKQALTSILHN 284

[Close]

BLAST of Carg24881-RA vs. ExPASy TrEMBL
Match: A0A6J1KTR9 (fatty-acid-binding protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111497562 PE=3 SV=1)

HSP 1 Score: 531.6 bits (1368), Expect = 2.1e-147
Identity = 276/284 (97.18%), Postives = 279/284 (98.24%), Query Frame = 0


Query: 1   MVSLRFPFSFPQPPKLPRHGFLRPSYAVVAAGGAAAAAGFVAVTINSTNQQSPFLESALN 60
           MVSLRFPFSFPQPPKLPRHGFLRPSYAVVAAGGAAAAAGFVAVTI STNQQSPFLESAL+
Sbjct: 1   MVSLRFPFSFPQPPKLPRHGFLRPSYAVVAAGGAAAAAGFVAVTIKSTNQQSPFLESALD 60

Query: 61  SLFRSHSSPLWASLSLADNSTTSSVVDSKTGMSFPSVIGDSQQLLGIGLRRKAILGLKNI 120
            LFRSHSSPLWASLSLA+NS TSSVVDSKTGMSFPSVIGDS QLLGIGLRRKAILGLKNI
Sbjct: 61  LLFRSHSSPLWASLSLAENSATSSVVDSKTGMSFPSVIGDSLQLLGIGLRRKAILGLKNI 120

Query: 121 NVYAYGVYADNNDIKESLSEKYGKLSVSELQEKNFDKDIMEADICMTVRLQIVYGRLSIR 180
           NVYAYGVYADNNDIKESLSEKYGKLSVSELQEKNFDKDIMEADICMTVRLQIVYGRLSIR
Sbjct: 121 NVYAYGVYADNNDIKESLSEKYGKLSVSELQEKNFDKDIMEADICMTVRLQIVYGRLSIR 180

Query: 181 SVRSAFEESVGSRLEKFGGSDNKELLHKFTSQFKDEYKIPRGSVIDLSKERGHVLRTIID 240
           SVRSAFEESVGSRLEKFGGSDNKELLHKFTSQFKDEYKIPRGSVIDLSKERGHVLRTIID
Sbjct: 181 SVRSAFEESVGSRLEKFGGSDNKELLHKFTSQFKDEYKIPRGSVIDLSKERGHVLRTIID 240

Query: 241 GKEVGSIESQLLCRAILDLYIGEHPFDKQAKQDIKQALTSILHN 285
           GKEVGSIES+LLCRAILDLYIGE PFDKQAKQDIKQALTSILHN
Sbjct: 241 GKEVGSIESELLCRAILDLYIGEDPFDKQAKQDIKQALTSILHN 284

[Close]

BLAST of Carg24881-RA vs. ExPASy TrEMBL
Match: A0A5A7VAP4 (Fatty-acid-binding protein 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold111G001720 PE=3 SV=1)

HSP 1 Score: 485.7 bits (1249), Expect = 1.3e-133
Identity = 252/283 (89.05%), Postives = 265/283 (93.64%), Query Frame = 0


Query: 1   MVSLRFPFSFPQPPKLPRHGFLRPSYAV-VAAGGAAAAAGFVAVTINSTNQQSPFLESAL 60
           MVSLRFPFSFPQPPK PR  FLRPSYAV VAAGGAAAA GFV    NSTN Q+PFLESAL
Sbjct: 1   MVSLRFPFSFPQPPKTPRRSFLRPSYAVAVAAGGAAAAVGFVYAARNSTNPQTPFLESAL 60

Query: 61  NSLFRSHSSPLWASLSLADNSTTSSVVDSKTGMSFPSVIGDSQQLLGIGLRRKAILGLKN 120
           N LF  HSSPLWASLSLA+NS  SSVVDSKTG SFPSVIGDSQQLLGIGLRRKAILGLKN
Sbjct: 61  NLLFSDHSSPLWASLSLAENSAASSVVDSKTGFSFPSVIGDSQQLLGIGLRRKAILGLKN 120

Query: 121 INVYAYGVYADNNDIKESLSEKYGKLSVSELQEKNFDKDIMEADICMTVRLQIVYGRLSI 180
           INVYA+GVYADN+DIKESLSEKYGKL+VSELQEK+FDKD+ME DICMTVRLQIVYG+LSI
Sbjct: 121 INVYAFGVYADNDDIKESLSEKYGKLTVSELQEKDFDKDVMEGDICMTVRLQIVYGKLSI 180

Query: 181 RSVRSAFEESVGSRLEKFGGSDNKELLHKFTSQFKDEYKIPRGSVIDLSKERGHVLRTII 240
           RSVRSAFEESVG+RL+KFGGSDNKELLHKFTSQFKDEYKIPRGSVIDLSKERGHVLRTII
Sbjct: 181 RSVRSAFEESVGNRLQKFGGSDNKELLHKFTSQFKDEYKIPRGSVIDLSKERGHVLRTII 240

Query: 241 DGKEVGSIESQLLCRAILDLYIGEHPFDKQAKQDIKQALTSIL 283
           DGKEVGSI+SQLLCRAILDLYIGE PFDKQAK+DI+QALTSIL
Sbjct: 241 DGKEVGSIQSQLLCRAILDLYIGEDPFDKQAKEDIRQALTSIL 283

[Close]

BLAST of Carg24881-RA vs. ExPASy TrEMBL
Match: A0A1S3BR98 (fatty-acid-binding protein 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492668 PE=3 SV=1)

HSP 1 Score: 485.0 bits (1247), Expect = 2.2e-133
Identity = 252/283 (89.05%), Postives = 265/283 (93.64%), Query Frame = 0


Query: 1   MVSLRFPFSFPQPPKLPRHGFLRPSYAV-VAAGGAAAAAGFVAVTINSTNQQSPFLESAL 60
           MVSLRFPFSFPQPPK PR  FLRPSYAV VAAGGAAAA GFV    NSTN Q+PFLESAL
Sbjct: 1   MVSLRFPFSFPQPPKPPRRSFLRPSYAVAVAAGGAAAAVGFVYAARNSTNPQTPFLESAL 60

Query: 61  NSLFRSHSSPLWASLSLADNSTTSSVVDSKTGMSFPSVIGDSQQLLGIGLRRKAILGLKN 120
           N LF  HSSPLWASLSLA+NS  SSVVDSKTG SFPSVIGDSQQLLGIGLRRKAILGLKN
Sbjct: 61  NLLFSDHSSPLWASLSLAENSAASSVVDSKTGFSFPSVIGDSQQLLGIGLRRKAILGLKN 120

Query: 121 INVYAYGVYADNNDIKESLSEKYGKLSVSELQEKNFDKDIMEADICMTVRLQIVYGRLSI 180
           INVYA+GVYADN+DIKESLSEKYGKL+VSELQEK+FDKD+ME DICMTVRLQIVYG+LSI
Sbjct: 121 INVYAFGVYADNDDIKESLSEKYGKLTVSELQEKDFDKDVMEGDICMTVRLQIVYGKLSI 180

Query: 181 RSVRSAFEESVGSRLEKFGGSDNKELLHKFTSQFKDEYKIPRGSVIDLSKERGHVLRTII 240
           RSVRSAFEESVG+RL+KFGGSDNKELLHKFTSQFKDEYKIPRGSVIDLSKERGHVLRTII
Sbjct: 181 RSVRSAFEESVGNRLQKFGGSDNKELLHKFTSQFKDEYKIPRGSVIDLSKERGHVLRTII 240

Query: 241 DGKEVGSIESQLLCRAILDLYIGEHPFDKQAKQDIKQALTSIL 283
           DGKEVGSI+SQLLCRAILDLYIGE PFDKQAK+DI+QALTSIL
Sbjct: 241 DGKEVGSIQSQLLCRAILDLYIGEDPFDKQAKEDIRQALTSIL 283

[Close]

BLAST of Carg24881-RA vs. ExPASy TrEMBL
Match: A0A0A0KAH6 (Chalcone_isomerase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G388440 PE=3 SV=1)

HSP 1 Score: 479.6 bits (1233), Expect = 9.3e-132
Identity = 249/283 (87.99%), Postives = 264/283 (93.29%), Query Frame = 0


Query: 1   MVSLRFPFSFPQPPKLPRHGFLRPSY-AVVAAGGAAAAAGFVAVTINSTNQQSPFLESAL 60
           MVSLRFPFSFPQPPK PR  FLRPSY A VAAGGAAAA GFVA   NSTN Q+PFLE AL
Sbjct: 1   MVSLRFPFSFPQPPKPPRRTFLRPSYAAAVAAGGAAAAVGFVAAARNSTNPQTPFLECAL 60

Query: 61  NSLFRSHSSPLWASLSLADNSTTSSVVDSKTGMSFPSVIGDSQQLLGIGLRRKAILGLKN 120
           N LF SHSSPLWASLSLA+NS  SSVVDSKTG SFPSVIGDSQQLLGIGLRRKAILGLKN
Sbjct: 61  NLLFSSHSSPLWASLSLAENSAASSVVDSKTGFSFPSVIGDSQQLLGIGLRRKAILGLKN 120

Query: 121 INVYAYGVYADNNDIKESLSEKYGKLSVSELQEKNFDKDIMEADICMTVRLQIVYGRLSI 180
           INVYA+GVYADN+DIKESLSEKYGKL+V+ELQEK+FDKD+ME DICMTVRLQIVYG+LSI
Sbjct: 121 INVYAFGVYADNDDIKESLSEKYGKLTVTELQEKDFDKDVMECDICMTVRLQIVYGKLSI 180

Query: 181 RSVRSAFEESVGSRLEKFGGSDNKELLHKFTSQFKDEYKIPRGSVIDLSKERGHVLRTII 240
           RSVRSAFEESVG+RL+KFGGSDNKELL KFTSQFKDEYKIPRGSVIDLSKERGHVLRTII
Sbjct: 181 RSVRSAFEESVGNRLQKFGGSDNKELLDKFTSQFKDEYKIPRGSVIDLSKERGHVLRTII 240

Query: 241 DGKEVGSIESQLLCRAILDLYIGEHPFDKQAKQDIKQALTSIL 283
           DGKEVGSI+SQLLCRAILDLYIGE PFDKQAK+D++QALTSIL
Sbjct: 241 DGKEVGSIQSQLLCRAILDLYIGEDPFDKQAKEDVRQALTSIL 283

[Close]

BLAST of Carg24881-RA vs. TAIR 10
Match: AT3G63170.1 (Chalcone-flavanone isomerase family protein )

HSP 1 Score: 297.7 bits (761), Expect = 9.6e-81
Identity = 166/284 (58.45%), Postives = 207/284 (72.89%), Query Frame = 0


Query: 1   MVSLRFPFSFPQPPKLPR--HGFLRPSYAVVAAGGAAAAAGFVAVTINSTNQQSPFLESA 60
           MVS RFPFSF QPP+      GF   + AV    GAAAA   +A    S N   P LE A
Sbjct: 1   MVSFRFPFSFSQPPRATTSFSGFSISAVAVSVTVGAAAAGAAIAA---SRNPSHPILEWA 60

Query: 61  LNSLFRSHSSPLWASLSLADNSTTSSVVDSKTGMSFPSVIGDSQQLLGIGLRRKAILGLK 120
            +S  RS  SP W S++LAD     SVV+ KTG SFP+ IGDS++LLG+GLR+K++LGLK
Sbjct: 61  FSS-HRSSLSP-WGSITLAD----ESVVEPKTGFSFPASIGDSRRLLGVGLRKKSLLGLK 120

Query: 121 NINVYAYGVYADNNDIKESLSEKYGKLSVSELQ-EKNFDKDIMEADICMTVRLQIVYGRL 180
           NI+VYA+GVYAD +D+K+ + +KY  L  SE++  K+F  D+MEADI MT+RLQIVYG+L
Sbjct: 121 NIDVYAFGVYADCDDVKKLVGDKYANLPASEIRGNKSFMDDLMEADIKMTIRLQIVYGKL 180

Query: 181 SIRSVRSAFEESVGSRLEKFGGSDNKELLHKFTSQFKDEYKIPRGSVIDLSKERGHVLRT 240
           +IRSVR+AF+ESVG+RL+KFGGSDN ELL  FTS FKDEYKIPR S IDL+K+ GHVL  
Sbjct: 181 NIRSVRNAFQESVGNRLKKFGGSDNDELLQSFTSLFKDEYKIPRNSTIDLTKDPGHVLSV 240

Query: 241 IIDGKEVGSIESQLLCRAILDLYIGEHPFDKQAKQDIKQALTSI 282
            I+G  VGS++S LLCR+ILDLYIGE PFDK A++D      S+
Sbjct: 241 AIEGNHVGSVKSHLLCRSILDLYIGEEPFDKNAREDFLDNAASL 275

[Close]

BLAST of Carg24881-RA vs. TAIR 10
Match: AT2G26310.1 (Chalcone-flavanone isomerase family protein )

HSP 1 Score: 119.8 bits (299), Expect = 3.6e-27
Identity = 79/266 (29.70%), Postives = 135/266 (50.75%), Query Frame = 0


Query: 24  PSYAVVAAGGAAAAAGFVAVTINSTNQQSPFLESALNSLFRSHSSPLWASLSLADNSTTS 83
           PS  V++A G A   G   V +    +     E+  +   +      ++ LS      T 
Sbjct: 131 PSLNVMSANGLALPLGSNDVKLRENIEHRTCPENTEHRTCQVGCEE-YSGLSFQKLDWTR 190

Query: 84  SVVDSKTGMSFPSVI------GDSQQLLGIGLRRKAILGLKNINVYAYGVYADNNDIKES 143
             V+ +TG+ FP ++       +S+ L+  G R   I+ +K++ VYA+G Y   + + + 
Sbjct: 191 QSVEPRTGIEFPMLLKENASRSNSEVLVATGSRTMKIIRIKSLKVYAFGFYVHPSSVCQK 250

Query: 144 LSEKYGKLSVSELQE-KNFDKDIMEADICMTVRLQIVYGRLSIRSVRSAFEESVGSRLEK 203
           L  KY  +  S+L +  +  KD++  DI M+VRL + Y  L I +VR  FE+S+ +RL K
Sbjct: 251 LGRKYASVPASKLDKCDDLYKDLLREDIVMSVRLVVNYNGLKINTVRDVFEKSLRARLVK 310

Query: 204 FGGSDNKELLHKFTSQFKDEYKIPRGSVIDLSKERGHVLRTIIDGKEVGSIESQLLCRAI 263
                +   L+ F S F+ +  IP G++ID  +     L T I G  +G++ S+ LCRA 
Sbjct: 311 ANPKTDFNCLNDFGSFFRQDIPIPAGTIIDFRRTEDGQLITEIGGNLIGAVRSKDLCRAF 370

Query: 264 LDLYIGEHPFDKQAKQDIKQALTSIL 283
             +YIG+ P  +Q K++I + +  I+
Sbjct: 371 FGMYIGDVPVSEQTKEEIGRKVVGII 395

[Close]

BLAST of Carg24881-RA vs. TAIR 10
Match: AT2G26310.3 (Chalcone-flavanone isomerase family protein )

HSP 1 Score: 119.8 bits (299), Expect = 3.6e-27
Identity = 79/266 (29.70%), Postives = 135/266 (50.75%), Query Frame = 0


Query: 24  PSYAVVAAGGAAAAAGFVAVTINSTNQQSPFLESALNSLFRSHSSPLWASLSLADNSTTS 83
           PS  V++A G A   G   V +    +     E+  +   +      ++ LS      T 
Sbjct: 3   PSLNVMSANGLALPLGSNDVKLRENIEHRTCPENTEHRTCQVGCEE-YSGLSFQKLDWTR 62

Query: 84  SVVDSKTGMSFPSVI------GDSQQLLGIGLRRKAILGLKNINVYAYGVYADNNDIKES 143
             V+ +TG+ FP ++       +S+ L+  G R   I+ +K++ VYA+G Y   + + + 
Sbjct: 63  QSVEPRTGIEFPMLLKENASRSNSEVLVATGSRTMKIIRIKSLKVYAFGFYVHPSSVCQK 122

Query: 144 LSEKYGKLSVSELQE-KNFDKDIMEADICMTVRLQIVYGRLSIRSVRSAFEESVGSRLEK 203
           L  KY  +  S+L +  +  KD++  DI M+VRL + Y  L I +VR  FE+S+ +RL K
Sbjct: 123 LGRKYASVPASKLDKCDDLYKDLLREDIVMSVRLVVNYNGLKINTVRDVFEKSLRARLVK 182

Query: 204 FGGSDNKELLHKFTSQFKDEYKIPRGSVIDLSKERGHVLRTIIDGKEVGSIESQLLCRAI 263
                +   L+ F S F+ +  IP G++ID  +     L T I G  +G++ S+ LCRA 
Sbjct: 183 ANPKTDFNCLNDFGSFFRQDIPIPAGTIIDFRRTEDGQLITEIGGNLIGAVRSKDLCRAF 242

Query: 264 LDLYIGEHPFDKQAKQDIKQALTSIL 283
             +YIG+ P  +Q K++I + +  I+
Sbjct: 243 FGMYIGDVPVSEQTKEEIGRKVVGII 267

[Close]

BLAST of Carg24881-RA vs. TAIR 10
Match: AT2G26310.2 (Chalcone-flavanone isomerase family protein )

HSP 1 Score: 99.0 bits (245), Expect = 6.6e-21
Identity = 73/266 (27.44%), Postives = 125/266 (46.99%), Query Frame = 0


Query: 24  PSYAVVAAGGAAAAAGFVAVTINSTNQQSPFLESALNSLFRSHSSPLWASLSLADNSTTS 83
           PS  V++A G A   G   V +    +     E+  +   +      ++ LS      T 
Sbjct: 131 PSLNVMSANGLALPLGSNDVKLRENIEHRTCPENTEHRTCQVGCEE-YSGLSFQKLDWTR 190

Query: 84  SVVDSKTGMSFPSVI------GDSQQLLGIGLRRKAILGLKNINVYAYGVYADNNDIKES 143
             V+ +TG+ FP ++       +S+ L+  G R   I+ +K++ VYA+G Y   + + + 
Sbjct: 191 QSVEPRTGIEFPMLLKENASRSNSEVLVATGSRTMKIIRIKSLKVYAFGFYVHPSSVCQK 250

Query: 144 LSEKYGKLSVSELQE-KNFDKDIMEADICMTVRLQIVYGRLSIRSVRSAFEESVGSRLEK 203
           L  KY  +  S+L +  +  KD++  DI M+VRL + Y  L I +VR  FE+S+ +RL K
Sbjct: 251 LGRKYASVPASKLDKCDDLYKDLLREDIVMSVRLVVNYNGLKINTVRDVFEKSLRARLVK 310

Query: 204 FGGSDNKELLHKFTSQFKDEYKIPRGSVIDLSKERGHVLRTIIDGKEVGSIESQLLCRAI 263
                                    G++ID  +     L T I G  +G++ S+ LCRA 
Sbjct: 311 -------------------------GTIIDFRRTEDGQLITEIGGNLIGAVRSKDLCRAF 370

Query: 264 LDLYIGEHPFDKQAKQDIKQALTSIL 283
             +YIG+ P  +Q K++I + +  I+
Sbjct: 371 FGMYIGDVPVSEQTKEEIGRKVVGII 370

The following BLAST results are available for this feature:

BLAST of Carg24881-RA vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7025526.1	2.6e-152	100.00	Fatty-acid-binding protein 1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6593122.1	2.8e-151	99.65	Fatty-acid-binding protein 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022960127.1	6.3e-151	99.30	fatty-acid-binding protein 1-like [Cucurbita moschata]	[more]
XP_023514703.1	1.6e-149	98.59	fatty-acid-binding protein 1 [Cucurbita pepo subsp. pepo]	[more]
XP_023004140.1	4.3e-147	97.18	fatty-acid-binding protein 1 [Cucurbita maxima]	[more]

BLAST of Carg24881-RA vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M1X2	1.4e-79	58.45	Fatty-acid-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=FAP1 PE=1 SV=1	[more]
A0A2U7XUH7	7.1e-28	33.98	Chalcone isomerase-like protein 1 OS=Humulus lupulus OX=3486 GN=CHIL1 PE=1 SV=1	[more]
Q84RK2	5.1e-26	29.70	Fatty-acid-binding protein 2 OS=Arabidopsis thaliana OX=3702 GN=FAP2 PE=2 SV=2	[more]
A2XNF0	5.4e-04	25.36	Chalcone--flavanone isomerase OS=Oryza sativa subsp. indica OX=39946 GN=CHI PE=2...	[more]
Q84T92	5.4e-04	25.36	Chalcone--flavanone isomerase OS=Oryza sativa subsp. japonica OX=39947 GN=CHI PE...	[more]

BLAST of Carg24881-RA vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H6I3	3.1e-151	99.30	fatty-acid-binding protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111460966 ...	[more]
A0A6J1KTR9	2.1e-147	97.18	fatty-acid-binding protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111497562 PE=3 SV...	[more]
A0A5A7VAP4	1.3e-133	89.05	Fatty-acid-binding protein 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3BR98	2.2e-133	89.05	fatty-acid-binding protein 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492668 ...	[more]
A0A0A0KAH6	9.3e-132	87.99	Chalcone_isomerase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7...	[more]

BLAST of Carg24881-RA vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G63170.1	9.6e-81	58.45	Chalcone-flavanone isomerase family protein	[more]
AT2G26310.1	3.6e-27	29.70	Chalcone-flavanone isomerase family protein	[more]
AT2G26310.3	3.6e-27	29.70	Chalcone-flavanone isomerase family protein	[more]
AT2G26310.2	6.6e-21	27.44	Chalcone-flavanone isomerase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016087	Chalcone isomerase	PFAM	PF16035	Chalcone_2	coord: 102..274 e-value: 1.9E-10 score: 40.9
IPR016089	Chalcone isomerase, orthogonal bundle domain superfamily	GENE3D	1.10.890.20		coord: 133..275 e-value: 3.3E-74 score: 250.6
IPR016088	Chalcone isomerase, 3-layer sandwich	GENE3D	3.50.70.10		coord: 86..260 e-value: 3.3E-74 score: 250.6
None	No IPR available	PANTHER	PTHR47589:SF5	FATTY-ACID-BINDING PROTEIN 1	coord: 1..283
IPR044228	Fatty-acid-binding protein 1	PANTHER	PTHR47589	FATTY-ACID-BINDING PROTEIN 1	coord: 1..283
IPR036298	Chalcone isomerase superfamily	SUPERFAMILY	54626	Chalcone isomerase	coord: 89..283

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg24881	Carg24881	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg24881-RA:1	Carg24881-RA:1	exon
Carg24881-RA:2	Carg24881-RA:2	exon
Carg24881-RA:3	Carg24881-RA:3	exon
Carg24881-RA:4	Carg24881-RA:4	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg24881-RA:five_prime_utr	Carg24881-RA:five_prime_utr	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg24881-RA:cds	Carg24881-RA:cds	CDS
Carg24881-RA:cds	Carg24881-RA:cds_2	CDS
Carg24881-RA:cds	Carg24881-RA:cds_3	CDS
Carg24881-RA:cds	Carg24881-RA:cds_4	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg24881-RA:three_prime_utr	Carg24881-RA:three_prime_utr	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg24881-RA	Carg24881-RA-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009813	flavonoid biosynthetic process
biological_process	GO:0006631	fatty acid metabolic process
cellular_component	GO:0009570	chloroplast stroma
molecular_function	GO:0016872	intramolecular lyase activity
molecular_function	GO:0005504	fatty acid binding