Carg24091-RA (mRNA) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg24091-RA
Type	mRNA
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	arginine/serine-rich coiled-coil protein 2-like isoform X3
Location	Carg_Chr03: 1917571 .. 1921353 (+)
Sequence length	1865
RNA-Seq Expression	Carg24091-RA
Synteny	Carg24091-RA

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATTAAGGGTAATATCGTAAATGCATATTTATAATTTTTGTAATAATTTTTGGGTTCGATAAGAGAAAAAGATTTATTGACACGTATGCAGTGCGCAATTGAATCTCATTCCTTCGTATAAAAATCGCTCAAGCAGACAAACGGGAATTAATGCTGGAATCGAAGAGGGGAATGAACAAACAATCGCCTACAAAATTATTCAAGTGCAGTGAATGAATTCAATCGTTTGCTTTTGAATCTCCTGACAAGGTATGAATTTCCATTTCTGCTTTCGATTTTTCCATTTTTCTTTCGTTTCTTGGCTTAGGGTTTGTTTTGGAATTCGAATTCGTCGATGTTTGAAACCCTAGGGTTGGATGTTTTCTTTGTTTGTTTGTTTGTTTGTCTGTCTGCTGGGAGAATTTCCTCAGGAACTGGGAGAGAGGTTGCAGGTTTTGTCTCCTCAAGCTTTGAATAGGGTTTTCTTTTGGTCTTTTTTGGTTCGGTTCCGTTAGTTATGTACTGGGTTTTTGTATTATCATGTTTCGCTCCCTTTCTTCTGGGAGAAAAAACTAGCTGCAACTTTTAGAAGCTGAAATGTGATGTCGTTGTCTTCTTGTGGATGTGTTATTAATTGTTGTTTTGGTAGCTTGTAAAATTTTGGTGGGAATGTTGTGTTGATCGTAAACGCTGGTTGCTGTGGTTCGTGCTACTATGAATTGCATTATTGGCCACTTGCTTTACTTGTTTGCAATCTTCTACTCTCTTCCTCGTGGCAACGAGTGTTTGGTTTGATTGGATGATGTGCAATTTTTGCTCCTTTTGCGTCTTTGTATCAAGTTTTCGTGATTTGTAAGTGACTTGTTGACAGTGTGTGTCTGTGTTTCAGGTCACTCTGTTGGCTATTCTAGTTTCATTTGAAATCAGGTTCATTAAGTGGATTGAACTTATAGCCTCCTACGATGGAAAACAATGGTATAAAAGCTGAATTTCGTAAGCCATCTTCTGAAACAGTTGGCAGAAAGTATAGACGTCGATCTTCTGTTAGTGGGTCGTCGTCATCAGATGGTTAGTTTGATTTGATTTTGGGTTTTTCTTTTGTGGAGTGAAAGTTCCTTCCGAAGACAACTATCGCATGATTCTCAATTATCTTTGTGTGGTCTGTCGGTTCTTTTTCTTTTCTATATTTAGTATGTTCATGCTCATTATAAATATTTTTTTTTTCAGAAAGTCCTAAACGAGACCGCAGTTATAGTCCAAAGCTCTCGAGAGATGATGCTTCAAAAGACTCTGAACGAAAACCAAGGAGAAAAGAGGATGAAAGAGAATTGAATAAGGATTCTGGAAATCATCATAGTCGAAATTCTGATTCTTATAGATATTCTGATCGGAAGTCCTCAAGAACTTCACATGGCTACTCTAGGCATGATGATTATGCCAGACATGACAAATATGCGGATGAAGACAAAGATTATGAACGGTTATCCTCTCGTTCTGGTAGGGAGTCAAAAGGTGGTGGTCATTATGATCATACAAGACGAGATAGTGAACATTTCCGTTCGCGAGACTACTCTCGGGATATAGTAAAAAGCTCTCGAGATAAATATGATGGTTCTGGACATAGAAGTAGGGATGGGGATTCCTTATCTGAGAAACATGGTTCTGGTAGTAGAAGGCATGTGAGCTCTAAAGAAATGGAGAAACATAGGAATATTAGAGATCGAGATGGTCGAGATGAGAAGAGAGACAATATGAAGCATTCTAGAGACTACAAAAATGAACGAGTGCTCTCCCATGACAATGCTAGGGGGAACCAGTATGACTCATTTTTAGGAAGGGATGAAAGCAAGCACTGTACAAAAGAAATTCATAAGAGTGACCAGAAGGACCTTGATGATGAAAAGTTCGCTAAGGATGAGAGGAAATATGATGGCAGAGAAACTCACTGGGACAAGGGCCACGGTAAAGCTGTTTTGGTAAATGAAAATCAAGGATTGCCTGCTAAGAAACCTAAATTGGTTAGCTTGGGTAAAGAAGTTAATCACGAACAGGATGGTAAGTGCTCTATCATGTCCTATTTCAAGTTGTTTACATGCTAGCTTCACACCAGCATTATTGTCCTTACCAGTTATGAAATTTGATTATGCAGCTGAAGAAAATCAATCTTCAACCTCTAAGCAAGAACAGGATGGAAAAATGAGTTTAGGACAAGCCCAAAGTGGCGATTCTGATTTTGCTGCTGACTTCAGTGCTGCAAAAGTTGCTGCCATGAAAGCTGCTGAATTAGGTAAAATCTAATTCTTTATCTAGAAATTCATGCTAACCTAAGATCAATAATCCCTCTCTGATTGTTTGTTAGTTCATTATGAGCAAAGGTCTAACAAATTTTTTTCGAGAACTACAAGCGTCTAATTTAGACTATTTTCCTTCCCTTTCAAAAAATTTATTCTCAATTAGATGATGGTTGTTCTCGAAAGTTTTTGTTGGACCTTTGCACATAATTTTGATTTTTTTTTTTTTAAATTGTTGAAGATAGTTGACTGCATTCTGGTATTGTTCTACTTACAATTCTAAAAGAACATGTTTACCAAATCTGCATGGCTTCTTTTAATATCCTTAAGTTTTAGAGCATAGCTCAACTAATTATGGAATATGCCACCCCCGAGATTCGAATTCCCTCTCTTACTTGTTGAACTGAAAAAAAGAAAAAAAAAAAAAAGATTACTGGAGCTATTTAGTGCACAAAGTAATAACGTTCACCTACTTGGGATCTTTTCTTTTTCTGGTTTTAGTTGGATTTGGTTATCTCTACAATCGTAGTTTGGTTTTCTTAGTTCAGTAACTGAAACTGGAACAAAATTCCGTTTGAAGGTTACATATCACTTTAATTCTGGTTTATGGCGTAGATTATTTACAATGGCAATAGTTCAGATTTGAATGATCTGTAACTTTTCACTTCGAATTTTTATAAATTTGTGGTTTCTGTTCCATTAACAGTTAATAAGAACCTTGTTGGCGTGGGTTATATGACCACCGATCAAAAGAAGAAGCTGCTGTGGGGGAGCAAAAAGAGTTCTGCTGTAGAGGAGGTATGCACAATCATCTAATACTTAATCATTTCTTCATTTTGTTTGGCATGAAATAGTTGTGCATTTGGTTCATAATTAGAGACTTCGAAGAACCGAACTGCTCTACCCACAGAATGACATATATGGATACTTTTCCGTGTTCTTCATAATGCTTTTCCATTGGTTACAGTCCGGACACCACCAGTGGGATACAGCGTTGTTTACCGATCGCGAACGGCAAGAAAAATTCAACAAACTCATGGTAAACTCTTCTCCTCCCCTCCCCTCCTCGCCCATCTACTCGATATATCCCTGAATGTTAGCAAGCTTTCATTGCTTAGTCGTGACTCAGTCCATTACAGTTTCTTCGTCACCTACTAACACATTTTTAGAGTCTGAGGTTGCCTTGGTGCCTATGGCCACTTGTAGGGTGTGAAGGGCGAGCTGAAGACGGAGCCCCAACCAACGAACCAAGATGGCAGCGAACTTCTCCGTGCCGAAAAGCAAAAGGAGCTCCAGATGGATTTAGAGAAACAATACACTGCTGGACTTCGAAGAAGAGACGGTCGAACGGTTGGATTAGGTCTTTAAGCGTGTTCGTCATCAGCTGTGGATTATTTCTGTGCTTTGATGAAATTGTTATGAGAATCTTTTGTTTATGTTGTTGCTGCACAAGAGTTGTGTTGGATGTGCTTTCAACAGCCTTTAACGTTATGTTATTCTCCTCTCCACCTCC

mRNA sequence

TATTAAGGGTAATATCGTAAATGCATATTTATAATTTTTGTAATAATTTTTGGGTTCGATAAGAGAAAAAGATTTATTGACACGTATGCAGTGCGCAATTGAATCTCATTCCTTCGTATAAAAATCGCTCAAGCAGACAAACGGGAATTAATGCTGGAATCGAAGAGGGGAATGAACAAACAATCGCCTACAAAATTATTCAAGTGCAGTGAATGAATTCAATCGTTTGCTTTTGAATCTCCTGACAAGGTCACTCTGTTGGCTATTCTAGTTTCATTTGAAATCAGGTTCATTAAGTGGATTGAACTTATAGCCTCCTACGATGGAAAACAATGGTATAAAAGCTGAATTTCGTAAGCCATCTTCTGAAACAGTTGGCAGAAAGTATAGACGTCGATCTTCTGTTAGTGGGTCGTCGTCATCAGATGAAAGTCCTAAACGAGACCGCAGTTATAGTCCAAAGCTCTCGAGAGATGATGCTTCAAAAGACTCTGAACGAAAACCAAGGAGAAAAGAGGATGAAAGAGAATTGAATAAGGATTCTGGAAATCATCATAGTCGAAATTCTGATTCTTATAGATATTCTGATCGGAAGTCCTCAAGAACTTCACATGGCTACTCTAGGCATGATGATTATGCCAGACATGACAAATATGCGGATGAAGACAAAGATTATGAACGGTTATCCTCTCGTTCTGGTAGGGAGTCAAAAGGTGGTGGTCATTATGATCATACAAGACGAGATAGTGAACATTTCCGTTCGCGAGACTACTCTCGGGATATAGTAAAAAGCTCTCGAGATAAATATGATGGTTCTGGACATAGAAGTAGGGATGGGGATTCCTTATCTGAGAAACATGGTTCTGGTAGTAGAAGGCATGTGAGCTCTAAAGAAATGGAGAAACATAGGAATATTAGAGATCGAGATGGTCGAGATGAGAAGAGAGACAATATGAAGCATTCTAGAGACTACAAAAATGAACGAGTGCTCTCCCATGACAATGCTAGGGGGAACCAGTATGACTCATTTTTAGGAAGGGATGAAAGCAAGCACTGTACAAAAGAAATTCATAAGAGTGACCAGAAGGACCTTGATGATGAAAAGTTCGCTAAGGATGAGAGGAAATATGATGGCAGAGAAACTCACTGGGACAAGGGCCACGGTAAAGCTGTTTTGGTAAATGAAAATCAAGGATTGCCTGCTAAGAAACCTAAATTGGTTAGCTTGGGTAAAGAAGTTAATCACGAACAGGATGCTGAAGAAAATCAATCTTCAACCTCTAAGCAAGAACAGGATGGAAAAATGAGTTTAGGACAAGCCCAAAGTGGCGATTCTGATTTTGCTGCTGACTTCAGTGCTGCAAAAGTTGCTGCCATGAAAGCTGCTGAATTAGTTAATAAGAACCTTGTTGGCGTGGGTTATATGACCACCGATCAAAAGAAGAAGCTGCTGTGGGGGAGCAAAAAGAGTTCTGCTGTAGAGGAGTCCGGACACCACCAGTGGGATACAGCGTTGTTTACCGATCGCGAACGGCAAGAAAAATTCAACAAACTCATGGGTGTGAAGGGCGAGCTGAAGACGGAGCCCCAACCAACGAACCAAGATGGCAGCGAACTTCTCCGTGCCGAAAAGCAAAAGGAGCTCCAGATGGATTTAGAGAAACAATACACTGCTGGACTTCGAAGAAGAGACGGTCGAACGGTTGGATTAGGTCTTTAAGCGTGTTCGTCATCAGCTGTGGATTATTTCTGTGCTTTGATGAAATTGTTATGAGAATCTTTTGTTTATGTTGTTGCTGCACAAGAGTTGTGTTGGATGTGCTTTCAACAGCCTTTAACGTTATGTTATTCTCCTCTCCACCTCC

Coding sequence (CDS)

ATGGAAAACAATGGTATAAAAGCTGAATTTCGTAAGCCATCTTCTGAAACAGTTGGCAGAAAGTATAGACGTCGATCTTCTGTTAGTGGGTCGTCGTCATCAGATGAAAGTCCTAAACGAGACCGCAGTTATAGTCCAAAGCTCTCGAGAGATGATGCTTCAAAAGACTCTGAACGAAAACCAAGGAGAAAAGAGGATGAAAGAGAATTGAATAAGGATTCTGGAAATCATCATAGTCGAAATTCTGATTCTTATAGATATTCTGATCGGAAGTCCTCAAGAACTTCACATGGCTACTCTAGGCATGATGATTATGCCAGACATGACAAATATGCGGATGAAGACAAAGATTATGAACGGTTATCCTCTCGTTCTGGTAGGGAGTCAAAAGGTGGTGGTCATTATGATCATACAAGACGAGATAGTGAACATTTCCGTTCGCGAGACTACTCTCGGGATATAGTAAAAAGCTCTCGAGATAAATATGATGGTTCTGGACATAGAAGTAGGGATGGGGATTCCTTATCTGAGAAACATGGTTCTGGTAGTAGAAGGCATGTGAGCTCTAAAGAAATGGAGAAACATAGGAATATTAGAGATCGAGATGGTCGAGATGAGAAGAGAGACAATATGAAGCATTCTAGAGACTACAAAAATGAACGAGTGCTCTCCCATGACAATGCTAGGGGGAACCAGTATGACTCATTTTTAGGAAGGGATGAAAGCAAGCACTGTACAAAAGAAATTCATAAGAGTGACCAGAAGGACCTTGATGATGAAAAGTTCGCTAAGGATGAGAGGAAATATGATGGCAGAGAAACTCACTGGGACAAGGGCCACGGTAAAGCTGTTTTGGTAAATGAAAATCAAGGATTGCCTGCTAAGAAACCTAAATTGGTTAGCTTGGGTAAAGAAGTTAATCACGAACAGGATGCTGAAGAAAATCAATCTTCAACCTCTAAGCAAGAACAGGATGGAAAAATGAGTTTAGGACAAGCCCAAAGTGGCGATTCTGATTTTGCTGCTGACTTCAGTGCTGCAAAAGTTGCTGCCATGAAAGCTGCTGAATTAGTTAATAAGAACCTTGTTGGCGTGGGTTATATGACCACCGATCAAAAGAAGAAGCTGCTGTGGGGGAGCAAAAAGAGTTCTGCTGTAGAGGAGTCCGGACACCACCAGTGGGATACAGCGTTGTTTACCGATCGCGAACGGCAAGAAAAATTCAACAAACTCATGGGTGTGAAGGGCGAGCTGAAGACGGAGCCCCAACCAACGAACCAAGATGGCAGCGAACTTCTCCGTGCCGAAAAGCAAAAGGAGCTCCAGATGGATTTAGAGAAACAATACACTGCTGGACTTCGAAGAAGAGACGGTCGAACGGTTGGATTAGGTCTTTAA

Protein sequence

MENNGIKAEFRKPSSETVGRKYRRRSSVSGSSSSDESPKRDRSYSPKLSRDDASKDSERKPRRKEDERELNKDSGNHHSRNSDSYRYSDRKSSRTSHGYSRHDDYARHDKYADEDKDYERLSSRSGRESKGGGHYDHTRRDSEHFRSRDYSRDIVKSSRDKYDGSGHRSRDGDSLSEKHGSGSRRHVSSKEMEKHRNIRDRDGRDEKRDNMKHSRDYKNERVLSHDNARGNQYDSFLGRDESKHCTKEIHKSDQKDLDDEKFAKDERKYDGRETHWDKGHGKAVLVNENQGLPAKKPKLVSLGKEVNHEQDAEENQSSTSKQEQDGKMSLGQAQSGDSDFAADFSAAKVAAMKAAELVNKNLVGVGYMTTDQKKKLLWGSKKSSAVEESGHHQWDTALFTDRERQEKFNKLMGVKGELKTEPQPTNQDGSELLRAEKQKELQMDLEKQYTAGLRRRDGRTVGLGL

Homology

[Close]

BLAST of Carg24091-RA vs. NCBI nr
Match: KAG7033583.1 (hypothetical protein SDJN02_03307 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 872.5 bits (2253), Expect = 1.7e-249
Identity = 465/465 (100.00%), Postives = 465/465 (100.00%), Query Frame = 0


Query: 1   MENNGIKAEFRKPSSETVGRKYRRRSSVSGSSSSDESPKRDRSYSPKLSRDDASKDSERK 60
           MENNGIKAEFRKPSSETVGRKYRRRSSVSGSSSSDESPKRDRSYSPKLSRDDASKDSERK
Sbjct: 1   MENNGIKAEFRKPSSETVGRKYRRRSSVSGSSSSDESPKRDRSYSPKLSRDDASKDSERK 60

Query: 61  PRRKEDERELNKDSGNHHSRNSDSYRYSDRKSSRTSHGYSRHDDYARHDKYADEDKDYER 120
           PRRKEDERELNKDSGNHHSRNSDSYRYSDRKSSRTSHGYSRHDDYARHDKYADEDKDYER
Sbjct: 61  PRRKEDERELNKDSGNHHSRNSDSYRYSDRKSSRTSHGYSRHDDYARHDKYADEDKDYER 120

Query: 121 LSSRSGRESKGGGHYDHTRRDSEHFRSRDYSRDIVKSSRDKYDGSGHRSRDGDSLSEKHG 180
           LSSRSGRESKGGGHYDHTRRDSEHFRSRDYSRDIVKSSRDKYDGSGHRSRDGDSLSEKHG
Sbjct: 121 LSSRSGRESKGGGHYDHTRRDSEHFRSRDYSRDIVKSSRDKYDGSGHRSRDGDSLSEKHG 180

Query: 181 SGSRRHVSSKEMEKHRNIRDRDGRDEKRDNMKHSRDYKNERVLSHDNARGNQYDSFLGRD 240
           SGSRRHVSSKEMEKHRNIRDRDGRDEKRDNMKHSRDYKNERVLSHDNARGNQYDSFLGRD
Sbjct: 181 SGSRRHVSSKEMEKHRNIRDRDGRDEKRDNMKHSRDYKNERVLSHDNARGNQYDSFLGRD 240

Query: 241 ESKHCTKEIHKSDQKDLDDEKFAKDERKYDGRETHWDKGHGKAVLVNENQGLPAKKPKLV 300
           ESKHCTKEIHKSDQKDLDDEKFAKDERKYDGRETHWDKGHGKAVLVNENQGLPAKKPKLV
Sbjct: 241 ESKHCTKEIHKSDQKDLDDEKFAKDERKYDGRETHWDKGHGKAVLVNENQGLPAKKPKLV 300

Query: 301 SLGKEVNHEQDAEENQSSTSKQEQDGKMSLGQAQSGDSDFAADFSAAKVAAMKAAELVNK 360
           SLGKEVNHEQDAEENQSSTSKQEQDGKMSLGQAQSGDSDFAADFSAAKVAAMKAAELVNK
Sbjct: 301 SLGKEVNHEQDAEENQSSTSKQEQDGKMSLGQAQSGDSDFAADFSAAKVAAMKAAELVNK 360

Query: 361 NLVGVGYMTTDQKKKLLWGSKKSSAVEESGHHQWDTALFTDRERQEKFNKLMGVKGELKT 420
           NLVGVGYMTTDQKKKLLWGSKKSSAVEESGHHQWDTALFTDRERQEKFNKLMGVKGELKT
Sbjct: 361 NLVGVGYMTTDQKKKLLWGSKKSSAVEESGHHQWDTALFTDRERQEKFNKLMGVKGELKT 420

Query: 421 EPQPTNQDGSELLRAEKQKELQMDLEKQYTAGLRRRDGRTVGLGL 466
           EPQPTNQDGSELLRAEKQKELQMDLEKQYTAGLRRRDGRTVGLGL
Sbjct: 421 EPQPTNQDGSELLRAEKQKELQMDLEKQYTAGLRRRDGRTVGLGL 465

[Close]

BLAST of Carg24091-RA vs. NCBI nr
Match: KAG6603305.1 (hypothetical protein SDJN03_03914, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 869.0 bits (2244), Expect = 1.8e-248
Identity = 463/465 (99.57%), Postives = 464/465 (99.78%), Query Frame = 0


Query: 1   MENNGIKAEFRKPSSETVGRKYRRRSSVSGSSSSDESPKRDRSYSPKLSRDDASKDSERK 60
           MENNGIKAEFRKPSSETVGRKYRRRSSVSGSSSSDESPKRDRSYSPKLSRDDASKDSERK
Sbjct: 1   MENNGIKAEFRKPSSETVGRKYRRRSSVSGSSSSDESPKRDRSYSPKLSRDDASKDSERK 60

Query: 61  PRRKEDERELNKDSGNHHSRNSDSYRYSDRKSSRTSHGYSRHDDYARHDKYADEDKDYER 120
           PRRKEDERELNKDSGNHHSRNSDSYRYSDRKSSRTSHGYSRHDDYARHDKYADEDKDYER
Sbjct: 61  PRRKEDERELNKDSGNHHSRNSDSYRYSDRKSSRTSHGYSRHDDYARHDKYADEDKDYER 120

Query: 121 LSSRSGRESKGGGHYDHTRRDSEHFRSRDYSRDIVKSSRDKYDGSGHRSRDGDSLSEKHG 180
           LSSRSGRESKGGGHYDHTRRDSEHFRSRDYSRDI KSSRDKYDGSGHRSRDGDSLSEKHG
Sbjct: 121 LSSRSGRESKGGGHYDHTRRDSEHFRSRDYSRDIEKSSRDKYDGSGHRSRDGDSLSEKHG 180

Query: 181 SGSRRHVSSKEMEKHRNIRDRDGRDEKRDNMKHSRDYKNERVLSHDNARGNQYDSFLGRD 240
           SGSRRH+SSKEMEKHRNIRDRDGRDEKRDNMKHSRDYKNERVLSHDNARGNQYDSFLGRD
Sbjct: 181 SGSRRHMSSKEMEKHRNIRDRDGRDEKRDNMKHSRDYKNERVLSHDNARGNQYDSFLGRD 240

Query: 241 ESKHCTKEIHKSDQKDLDDEKFAKDERKYDGRETHWDKGHGKAVLVNENQGLPAKKPKLV 300
           ESKHCTKEIHKSDQKDLDDEKFAKDERKYDGRETHWDKGHGKAVLVNENQGLPAKKPKLV
Sbjct: 241 ESKHCTKEIHKSDQKDLDDEKFAKDERKYDGRETHWDKGHGKAVLVNENQGLPAKKPKLV 300

Query: 301 SLGKEVNHEQDAEENQSSTSKQEQDGKMSLGQAQSGDSDFAADFSAAKVAAMKAAELVNK 360
           SLGKEVNHEQDAEENQSSTSKQEQDGKMSLGQAQSGDSDFAADFSAAKVAAMKAAELVNK
Sbjct: 301 SLGKEVNHEQDAEENQSSTSKQEQDGKMSLGQAQSGDSDFAADFSAAKVAAMKAAELVNK 360

Query: 361 NLVGVGYMTTDQKKKLLWGSKKSSAVEESGHHQWDTALFTDRERQEKFNKLMGVKGELKT 420
           NLVGVGYMTTDQKKKLLWGSKKSSAVEESGHHQWDTALFTDRERQEKFNKLMGVKGELKT
Sbjct: 361 NLVGVGYMTTDQKKKLLWGSKKSSAVEESGHHQWDTALFTDRERQEKFNKLMGVKGELKT 420

Query: 421 EPQPTNQDGSELLRAEKQKELQMDLEKQYTAGLRRRDGRTVGLGL 466
           EPQPTNQDGSELLRAEKQKELQMDLEKQYTAGLRRRDGRTVGLGL
Sbjct: 421 EPQPTNQDGSELLRAEKQKELQMDLEKQYTAGLRRRDGRTVGLGL 465

[Close]

BLAST of Carg24091-RA vs. NCBI nr
Match: XP_022932886.1 (arginine/serine-rich coiled-coil protein 2-like isoform X3 [Cucurbita moschata])

HSP 1 Score: 865.5 bits (2235), Expect = 2.0e-247
Identity = 465/472 (98.52%), Postives = 465/472 (98.52%), Query Frame = 0


Query: 1   MENNGIKAEFRKPSSETVGRKYRRRSSVSGSSSSDESPKRDRSYSPKLSRDDASKDSERK 60
           MENNGIKAEFRKPSSETVGRKYRRRSSVSGSSSSDESPKRDRSYSPKLSRDDASKDSERK
Sbjct: 1   MENNGIKAEFRKPSSETVGRKYRRRSSVSGSSSSDESPKRDRSYSPKLSRDDASKDSERK 60

Query: 61  PRRKEDERELNKDSGNHHSRNSDSYRYSDRKSSRTSHGYSRHDDYARHDKYADEDKDYER 120
           PRRKEDERELNKDSGNHHSRNSDSYRYSDRKSSRTSHGYSRHDDYARHDKYADEDKDYER
Sbjct: 61  PRRKEDERELNKDSGNHHSRNSDSYRYSDRKSSRTSHGYSRHDDYARHDKYADEDKDYER 120

Query: 121 LSSRSGRESKGGGHYDHTRRDSEHFRSRDYSRDIVKSSRDKYDGSGHRSRDGDSLSEKHG 180
           LSSRSGRESKGGGHYDHTRRDSEHFRSRDYSRDIVKSSRDKYDGSGHRSRDGDSLSEKHG
Sbjct: 121 LSSRSGRESKGGGHYDHTRRDSEHFRSRDYSRDIVKSSRDKYDGSGHRSRDGDSLSEKHG 180

Query: 181 SGSRRHVSSKEMEKHRNIRDRDGRDEKRDNMKHSRDYKNERVLSHDNARGNQYDSFLGRD 240
           SGSRRHVSSKEMEKHRNIRDRDGRDEKRDNMKHSRDYKNERVLSHDNARGNQYDSFLGRD
Sbjct: 181 SGSRRHVSSKEMEKHRNIRDRDGRDEKRDNMKHSRDYKNERVLSHDNARGNQYDSFLGRD 240

Query: 241 ESKHCTKEIHKSDQKDLDDEKFAKDERKYDGRETHWDKGHGKAVLVNENQGLPAKKPKLV 300
           ESKHCTKEIHKSDQKDLDDEKFAKDERKYDGRETHWDKGHGKAVLVNENQGLPAKKPKLV
Sbjct: 241 ESKHCTKEIHKSDQKDLDDEKFAKDERKYDGRETHWDKGHGKAVLVNENQGLPAKKPKLV 300

Query: 301 SLGKEVNHEQD-------AEENQSSTSKQEQDGKMSLGQAQSGDSDFAADFSAAKVAAMK 360
           SLGKEVNHEQD       AEENQSSTSKQEQDGKMSLGQAQSGDSDFAADFSAAKVAAMK
Sbjct: 301 SLGKEVNHEQDVMKFDYAAEENQSSTSKQEQDGKMSLGQAQSGDSDFAADFSAAKVAAMK 360

Query: 361 AAELVNKNLVGVGYMTTDQKKKLLWGSKKSSAVEESGHHQWDTALFTDRERQEKFNKLMG 420
           AAELVNKNLVGVGYMTTDQKKKLLWGSKKSSAVEESGHHQWDTALFTDRERQEKFNKLMG
Sbjct: 361 AAELVNKNLVGVGYMTTDQKKKLLWGSKKSSAVEESGHHQWDTALFTDRERQEKFNKLMG 420

Query: 421 VKGELKTEPQPTNQDGSELLRAEKQKELQMDLEKQYTAGLRRRDGRTVGLGL 466
           VKGELKTEPQPTNQDGSELLRAEKQKELQMDLEKQYTAGLRRRDGRTVGLGL
Sbjct: 421 VKGELKTEPQPTNQDGSELLRAEKQKELQMDLEKQYTAGLRRRDGRTVGLGL 472

[Close]

BLAST of Carg24091-RA vs. NCBI nr
Match: XP_023544469.1 (arginine/serine-rich coiled-coil protein 2-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 862.8 bits (2228), Expect = 1.3e-246
Identity = 463/472 (98.09%), Postives = 464/472 (98.31%), Query Frame = 0


Query: 1   MENNGIKAEFRKPSSETVGRKYRRRSSVSGSSSSDESPKRDRSYSPKLSRDDASKDSERK 60
           MENNGIKAEFRKPSSETVGRKYRRRSSVSGSSSSDESPKRDRSYSPKLSRDDASKDSERK
Sbjct: 1   MENNGIKAEFRKPSSETVGRKYRRRSSVSGSSSSDESPKRDRSYSPKLSRDDASKDSERK 60

Query: 61  PRRKEDERELNKDSGNHHSRNSDSYRYSDRKSSRTSHGYSRHDDYARHDKYADEDKDYER 120
           PRRKEDERELNKDSGNHHSRNSDSYRYSDRKSSRTSHGYSRHDDYARHDKYADEDKDYER
Sbjct: 61  PRRKEDERELNKDSGNHHSRNSDSYRYSDRKSSRTSHGYSRHDDYARHDKYADEDKDYER 120

Query: 121 LSSRSGRESKGGGHYDHTRRDSEHFRSRDYSRDIVKSSRDKYDGSGHRSRDGDSLSEKHG 180
           LSSRSGRESKGGGHYDHTRRDSEHFRSRDYSRD+ KSSRDKYDGSGHRSRDGDSLSEKHG
Sbjct: 121 LSSRSGRESKGGGHYDHTRRDSEHFRSRDYSRDVEKSSRDKYDGSGHRSRDGDSLSEKHG 180

Query: 181 SGSRRHVSSKEMEKHRNIRDRDGRDEKRDNMKHSRDYKNERVLSHDNARGNQYDSFLGRD 240
           SGSRRHVSSKEMEKHRNIRDRDGRDEKRDNMKHSRDYKNERVLSHDNARGNQYDSFLGRD
Sbjct: 181 SGSRRHVSSKEMEKHRNIRDRDGRDEKRDNMKHSRDYKNERVLSHDNARGNQYDSFLGRD 240

Query: 241 ESKHCTKEIHKSDQKDLDDEKFAKDERKYDGRETHWDKGHGKAVLVNENQGLPAKKPKLV 300
           ESKHCTKEIHKSDQKDLDDEKFAKDERKYDGRETHWDKGHGKAVLVNENQGLPAKKPKLV
Sbjct: 241 ESKHCTKEIHKSDQKDLDDEKFAKDERKYDGRETHWDKGHGKAVLVNENQGLPAKKPKLV 300

Query: 301 SLGKEVNHEQD-------AEENQSSTSKQEQDGKMSLGQAQSGDSDFAADFSAAKVAAMK 360
           SLGKEVNHEQD       AEENQSSTSKQEQDGKMSLGQAQSGDSDFAADFSAAKVAAMK
Sbjct: 301 SLGKEVNHEQDVMKFDYAAEENQSSTSKQEQDGKMSLGQAQSGDSDFAADFSAAKVAAMK 360

Query: 361 AAELVNKNLVGVGYMTTDQKKKLLWGSKKSSAVEESGHHQWDTALFTDRERQEKFNKLMG 420
           AAELVNKNLVGVGYMTTDQKKKLLWGSKKSSAVEESGHHQWDTALFTDRERQEKFNKLMG
Sbjct: 361 AAELVNKNLVGVGYMTTDQKKKLLWGSKKSSAVEESGHHQWDTALFTDRERQEKFNKLMG 420

Query: 421 VKGELKTEPQPTNQDGSELLRAEKQKELQMDLEKQYTAGLRRRDGRTVGLGL 466
           VKGELKTEPQPTNQDGSELLRAEKQKELQMDLEKQYTAGLRRRDGRTVGLGL
Sbjct: 421 VKGELKTEPQPTNQDGSELLRAEKQKELQMDLEKQYTAGLRRRDGRTVGLGL 472

[Close]

BLAST of Carg24091-RA vs. NCBI nr
Match: XP_022967758.1 (arginine/serine-rich coiled-coil protein 2 isoform X3 [Cucurbita maxima])

HSP 1 Score: 850.1 bits (2195), Expect = 8.9e-243
Identity = 456/472 (96.61%), Postives = 461/472 (97.67%), Query Frame = 0


Query: 1   MENNGIKAEFRKPSSETVGRKYRRRSSVSGSSSSDESPKRDRSYSPKLSRDDASKDSERK 60
           MENNGIKAEFRKPSSETVGRKYRRRSSVSGSSSSDESPKRD SYSPKLSRDDASKDSERK
Sbjct: 1   MENNGIKAEFRKPSSETVGRKYRRRSSVSGSSSSDESPKRDCSYSPKLSRDDASKDSERK 60

Query: 61  PRRKEDERELNKDSGNHHSRNSDSYRYSDRKSSRTSHGYSRHDDYARHDKYADEDKDYER 120
           PRRKEDERELNKDSGNHHSRNSDSYRYSDRKSSRTSHGYSRHDDYARHDKYADEDKDYER
Sbjct: 61  PRRKEDERELNKDSGNHHSRNSDSYRYSDRKSSRTSHGYSRHDDYARHDKYADEDKDYER 120

Query: 121 LSSRSGRESKGGGHYDHTRRDSEHFRSRDYSRDIVKSSRDKYDGSGHRSRDGDSLSEKHG 180
           LSSRSGRE+KG GHYDHTRRDSEHFRSRD+SRD+ KSSRDKYDGSGHRSRDGDSLSEKHG
Sbjct: 121 LSSRSGREAKGAGHYDHTRRDSEHFRSRDFSRDVEKSSRDKYDGSGHRSRDGDSLSEKHG 180

Query: 181 SGSRRHVSSKEMEKHRNIRDRDGRDEKRDNMKHSRDYKNERVLSHDNARGNQYDSFLGRD 240
           SGSRRHVSSKEMEKHRNIRDRDGRDEKRDNMKHSRDYKNERVLSHDNARGNQYDSFLGRD
Sbjct: 181 SGSRRHVSSKEMEKHRNIRDRDGRDEKRDNMKHSRDYKNERVLSHDNARGNQYDSFLGRD 240

Query: 241 ESKHCTKEIHKSDQKDLDDEKFAKDERKYDGRETHWDKGHGKAVLVNENQGLPAKKPKLV 300
           ESKHCTKEIHKSDQK+LDDEKFAKDERKYDGR+THWDKGHGKAVLVNENQGLPAKKPKLV
Sbjct: 241 ESKHCTKEIHKSDQKNLDDEKFAKDERKYDGRDTHWDKGHGKAVLVNENQGLPAKKPKLV 300

Query: 301 SLGKEVNHEQDA-------EENQSSTSKQEQDGKMSLGQAQSGDSDFAADFSAAKVAAMK 360
           SLGKEVNHEQD        EENQSSTSKQEQDGKMSLGQAQSGDSDFAADFSAAKVAAMK
Sbjct: 301 SLGKEVNHEQDVMKFDYADEENQSSTSKQEQDGKMSLGQAQSGDSDFAADFSAAKVAAMK 360

Query: 361 AAELVNKNLVGVGYMTTDQKKKLLWGSKKSSAVEESGHHQWDTALFTDRERQEKFNKLMG 420
           AAELVNKNLVGVGYMTTDQKKKLLWGSKKSSAVEESGHHQWDTALFTDRERQEKFNKLMG
Sbjct: 361 AAELVNKNLVGVGYMTTDQKKKLLWGSKKSSAVEESGHHQWDTALFTDRERQEKFNKLMG 420

Query: 421 VKGELKTEPQPTNQDGSELLRAEKQKELQMDLEKQYTAGLRRRDGRTVGLGL 466
           VKGELKTEPQPTNQDGSELLRAEKQKELQMDLEKQYTAGLRRRDGRTVGLGL
Sbjct: 421 VKGELKTEPQPTNQDGSELLRAEKQKELQMDLEKQYTAGLRRRDGRTVGLGL 472

[Close]

BLAST of Carg24091-RA vs. ExPASy TrEMBL
Match: A0A6J1EXM0 (arginine/serine-rich coiled-coil protein 2-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111439412 PE=4 SV=1)

HSP 1 Score: 865.5 bits (2235), Expect = 9.9e-248
Identity = 465/472 (98.52%), Postives = 465/472 (98.52%), Query Frame = 0


Query: 1   MENNGIKAEFRKPSSETVGRKYRRRSSVSGSSSSDESPKRDRSYSPKLSRDDASKDSERK 60
           MENNGIKAEFRKPSSETVGRKYRRRSSVSGSSSSDESPKRDRSYSPKLSRDDASKDSERK
Sbjct: 1   MENNGIKAEFRKPSSETVGRKYRRRSSVSGSSSSDESPKRDRSYSPKLSRDDASKDSERK 60

Query: 61  PRRKEDERELNKDSGNHHSRNSDSYRYSDRKSSRTSHGYSRHDDYARHDKYADEDKDYER 120
           PRRKEDERELNKDSGNHHSRNSDSYRYSDRKSSRTSHGYSRHDDYARHDKYADEDKDYER
Sbjct: 61  PRRKEDERELNKDSGNHHSRNSDSYRYSDRKSSRTSHGYSRHDDYARHDKYADEDKDYER 120

Query: 121 LSSRSGRESKGGGHYDHTRRDSEHFRSRDYSRDIVKSSRDKYDGSGHRSRDGDSLSEKHG 180
           LSSRSGRESKGGGHYDHTRRDSEHFRSRDYSRDIVKSSRDKYDGSGHRSRDGDSLSEKHG
Sbjct: 121 LSSRSGRESKGGGHYDHTRRDSEHFRSRDYSRDIVKSSRDKYDGSGHRSRDGDSLSEKHG 180

Query: 181 SGSRRHVSSKEMEKHRNIRDRDGRDEKRDNMKHSRDYKNERVLSHDNARGNQYDSFLGRD 240
           SGSRRHVSSKEMEKHRNIRDRDGRDEKRDNMKHSRDYKNERVLSHDNARGNQYDSFLGRD
Sbjct: 181 SGSRRHVSSKEMEKHRNIRDRDGRDEKRDNMKHSRDYKNERVLSHDNARGNQYDSFLGRD 240

Query: 241 ESKHCTKEIHKSDQKDLDDEKFAKDERKYDGRETHWDKGHGKAVLVNENQGLPAKKPKLV 300
           ESKHCTKEIHKSDQKDLDDEKFAKDERKYDGRETHWDKGHGKAVLVNENQGLPAKKPKLV
Sbjct: 241 ESKHCTKEIHKSDQKDLDDEKFAKDERKYDGRETHWDKGHGKAVLVNENQGLPAKKPKLV 300

Query: 301 SLGKEVNHEQD-------AEENQSSTSKQEQDGKMSLGQAQSGDSDFAADFSAAKVAAMK 360
           SLGKEVNHEQD       AEENQSSTSKQEQDGKMSLGQAQSGDSDFAADFSAAKVAAMK
Sbjct: 301 SLGKEVNHEQDVMKFDYAAEENQSSTSKQEQDGKMSLGQAQSGDSDFAADFSAAKVAAMK 360

Query: 361 AAELVNKNLVGVGYMTTDQKKKLLWGSKKSSAVEESGHHQWDTALFTDRERQEKFNKLMG 420
           AAELVNKNLVGVGYMTTDQKKKLLWGSKKSSAVEESGHHQWDTALFTDRERQEKFNKLMG
Sbjct: 361 AAELVNKNLVGVGYMTTDQKKKLLWGSKKSSAVEESGHHQWDTALFTDRERQEKFNKLMG 420

Query: 421 VKGELKTEPQPTNQDGSELLRAEKQKELQMDLEKQYTAGLRRRDGRTVGLGL 466
           VKGELKTEPQPTNQDGSELLRAEKQKELQMDLEKQYTAGLRRRDGRTVGLGL
Sbjct: 421 VKGELKTEPQPTNQDGSELLRAEKQKELQMDLEKQYTAGLRRRDGRTVGLGL 472

[Close]

BLAST of Carg24091-RA vs. ExPASy TrEMBL
Match: A0A6J1HW17 (arginine/serine-rich coiled-coil protein 2 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111467184 PE=4 SV=1)

HSP 1 Score: 850.1 bits (2195), Expect = 4.3e-243
Identity = 456/472 (96.61%), Postives = 461/472 (97.67%), Query Frame = 0


Query: 1   MENNGIKAEFRKPSSETVGRKYRRRSSVSGSSSSDESPKRDRSYSPKLSRDDASKDSERK 60
           MENNGIKAEFRKPSSETVGRKYRRRSSVSGSSSSDESPKRD SYSPKLSRDDASKDSERK
Sbjct: 1   MENNGIKAEFRKPSSETVGRKYRRRSSVSGSSSSDESPKRDCSYSPKLSRDDASKDSERK 60

Query: 61  PRRKEDERELNKDSGNHHSRNSDSYRYSDRKSSRTSHGYSRHDDYARHDKYADEDKDYER 120
           PRRKEDERELNKDSGNHHSRNSDSYRYSDRKSSRTSHGYSRHDDYARHDKYADEDKDYER
Sbjct: 61  PRRKEDERELNKDSGNHHSRNSDSYRYSDRKSSRTSHGYSRHDDYARHDKYADEDKDYER 120

Query: 121 LSSRSGRESKGGGHYDHTRRDSEHFRSRDYSRDIVKSSRDKYDGSGHRSRDGDSLSEKHG 180
           LSSRSGRE+KG GHYDHTRRDSEHFRSRD+SRD+ KSSRDKYDGSGHRSRDGDSLSEKHG
Sbjct: 121 LSSRSGREAKGAGHYDHTRRDSEHFRSRDFSRDVEKSSRDKYDGSGHRSRDGDSLSEKHG 180

Query: 181 SGSRRHVSSKEMEKHRNIRDRDGRDEKRDNMKHSRDYKNERVLSHDNARGNQYDSFLGRD 240
           SGSRRHVSSKEMEKHRNIRDRDGRDEKRDNMKHSRDYKNERVLSHDNARGNQYDSFLGRD
Sbjct: 181 SGSRRHVSSKEMEKHRNIRDRDGRDEKRDNMKHSRDYKNERVLSHDNARGNQYDSFLGRD 240

Query: 241 ESKHCTKEIHKSDQKDLDDEKFAKDERKYDGRETHWDKGHGKAVLVNENQGLPAKKPKLV 300
           ESKHCTKEIHKSDQK+LDDEKFAKDERKYDGR+THWDKGHGKAVLVNENQGLPAKKPKLV
Sbjct: 241 ESKHCTKEIHKSDQKNLDDEKFAKDERKYDGRDTHWDKGHGKAVLVNENQGLPAKKPKLV 300

Query: 301 SLGKEVNHEQDA-------EENQSSTSKQEQDGKMSLGQAQSGDSDFAADFSAAKVAAMK 360
           SLGKEVNHEQD        EENQSSTSKQEQDGKMSLGQAQSGDSDFAADFSAAKVAAMK
Sbjct: 301 SLGKEVNHEQDVMKFDYADEENQSSTSKQEQDGKMSLGQAQSGDSDFAADFSAAKVAAMK 360

Query: 361 AAELVNKNLVGVGYMTTDQKKKLLWGSKKSSAVEESGHHQWDTALFTDRERQEKFNKLMG 420
           AAELVNKNLVGVGYMTTDQKKKLLWGSKKSSAVEESGHHQWDTALFTDRERQEKFNKLMG
Sbjct: 361 AAELVNKNLVGVGYMTTDQKKKLLWGSKKSSAVEESGHHQWDTALFTDRERQEKFNKLMG 420

Query: 421 VKGELKTEPQPTNQDGSELLRAEKQKELQMDLEKQYTAGLRRRDGRTVGLGL 466
           VKGELKTEPQPTNQDGSELLRAEKQKELQMDLEKQYTAGLRRRDGRTVGLGL
Sbjct: 421 VKGELKTEPQPTNQDGSELLRAEKQKELQMDLEKQYTAGLRRRDGRTVGLGL 472

[Close]

BLAST of Carg24091-RA vs. ExPASy TrEMBL
Match: A0A6J1F3C3 (arginine/serine-rich coiled-coil protein 2-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111439412 PE=4 SV=1)

HSP 1 Score: 773.9 bits (1997), Expect = 3.9e-220
Identity = 412/415 (99.28%), Postives = 414/415 (99.76%), Query Frame = 0


Query: 1   MENNGIKAEFRKPSSETVGRKYRRRSSVSGSSSSDESPKRDRSYSPKLSRDDASKDSERK 60
           MENNGIKAEFRKPSSETVGRKYRRRSSVSGSSSSDESPKRDRSYSPKLSRDDASKDSERK
Sbjct: 1   MENNGIKAEFRKPSSETVGRKYRRRSSVSGSSSSDESPKRDRSYSPKLSRDDASKDSERK 60

Query: 61  PRRKEDERELNKDSGNHHSRNSDSYRYSDRKSSRTSHGYSRHDDYARHDKYADEDKDYER 120
           PRRKEDERELNKDSGNHHSRNSDSYRYSDRKSSRTSHGYSRHDDYARHDKYADEDKDYER
Sbjct: 61  PRRKEDERELNKDSGNHHSRNSDSYRYSDRKSSRTSHGYSRHDDYARHDKYADEDKDYER 120

Query: 121 LSSRSGRESKGGGHYDHTRRDSEHFRSRDYSRDIVKSSRDKYDGSGHRSRDGDSLSEKHG 180
           LSSRSGRESKGGGHYDHTRRDSEHFRSRDYSRDIVKSSRDKYDGSGHRSRDGDSLSEKHG
Sbjct: 121 LSSRSGRESKGGGHYDHTRRDSEHFRSRDYSRDIVKSSRDKYDGSGHRSRDGDSLSEKHG 180

Query: 181 SGSRRHVSSKEMEKHRNIRDRDGRDEKRDNMKHSRDYKNERVLSHDNARGNQYDSFLGRD 240
           SGSRRHVSSKEMEKHRNIRDRDGRDEKRDNMKHSRDYKNERVLSHDNARGNQYDSFLGRD
Sbjct: 181 SGSRRHVSSKEMEKHRNIRDRDGRDEKRDNMKHSRDYKNERVLSHDNARGNQYDSFLGRD 240

Query: 241 ESKHCTKEIHKSDQKDLDDEKFAKDERKYDGRETHWDKGHGKAVLVNENQGLPAKKPKLV 300
           ESKHCTKEIHKSDQKDLDDEKFAKDERKYDGRETHWDKGHGKAVLVNENQGLPAKKPKLV
Sbjct: 241 ESKHCTKEIHKSDQKDLDDEKFAKDERKYDGRETHWDKGHGKAVLVNENQGLPAKKPKLV 300

Query: 301 SLGKEVNHEQDAEENQSSTSKQEQDGKMSLGQAQSGDSDFAADFSAAKVAAMKAAELVNK 360
           SLGKEVNHEQDAEENQSSTSKQEQDGKMSLGQAQSGDSDFAADFSAAKVAAMKAAELVNK
Sbjct: 301 SLGKEVNHEQDAEENQSSTSKQEQDGKMSLGQAQSGDSDFAADFSAAKVAAMKAAELVNK 360

Query: 361 NLVGVGYMTTDQKKKLLWGSKKSSAVEESGHHQWDTALFTDRERQEKFNKLMGVK 416
           NLVGVGYMTTDQKKKLLWGSKKSSAVEESGHHQWDTALFTDRERQEKFNKLM ++
Sbjct: 361 NLVGVGYMTTDQKKKLLWGSKKSSAVEESGHHQWDTALFTDRERQEKFNKLMSLR 415

[Close]

BLAST of Carg24091-RA vs. ExPASy TrEMBL
Match: A0A6J1EY91 (arginine/serine-rich coiled-coil protein 2-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111439412 PE=4 SV=1)

HSP 1 Score: 766.9 bits (1979), Expect = 4.8e-218
Identity = 412/422 (97.63%), Postives = 414/422 (98.10%), Query Frame = 0


Query: 1   MENNGIKAEFRKPSSETVGRKYRRRSSVSGSSSSDESPKRDRSYSPKLSRDDASKDSERK 60
           MENNGIKAEFRKPSSETVGRKYRRRSSVSGSSSSDESPKRDRSYSPKLSRDDASKDSERK
Sbjct: 1   MENNGIKAEFRKPSSETVGRKYRRRSSVSGSSSSDESPKRDRSYSPKLSRDDASKDSERK 60

Query: 61  PRRKEDERELNKDSGNHHSRNSDSYRYSDRKSSRTSHGYSRHDDYARHDKYADEDKDYER 120
           PRRKEDERELNKDSGNHHSRNSDSYRYSDRKSSRTSHGYSRHDDYARHDKYADEDKDYER
Sbjct: 61  PRRKEDERELNKDSGNHHSRNSDSYRYSDRKSSRTSHGYSRHDDYARHDKYADEDKDYER 120

Query: 121 LSSRSGRESKGGGHYDHTRRDSEHFRSRDYSRDIVKSSRDKYDGSGHRSRDGDSLSEKHG 180
           LSSRSGRESKGGGHYDHTRRDSEHFRSRDYSRDIVKSSRDKYDGSGHRSRDGDSLSEKHG
Sbjct: 121 LSSRSGRESKGGGHYDHTRRDSEHFRSRDYSRDIVKSSRDKYDGSGHRSRDGDSLSEKHG 180

Query: 181 SGSRRHVSSKEMEKHRNIRDRDGRDEKRDNMKHSRDYKNERVLSHDNARGNQYDSFLGRD 240
           SGSRRHVSSKEMEKHRNIRDRDGRDEKRDNMKHSRDYKNERVLSHDNARGNQYDSFLGRD
Sbjct: 181 SGSRRHVSSKEMEKHRNIRDRDGRDEKRDNMKHSRDYKNERVLSHDNARGNQYDSFLGRD 240

Query: 241 ESKHCTKEIHKSDQKDLDDEKFAKDERKYDGRETHWDKGHGKAVLVNENQGLPAKKPKLV 300
           ESKHCTKEIHKSDQKDLDDEKFAKDERKYDGRETHWDKGHGKAVLVNENQGLPAKKPKLV
Sbjct: 241 ESKHCTKEIHKSDQKDLDDEKFAKDERKYDGRETHWDKGHGKAVLVNENQGLPAKKPKLV 300

Query: 301 SLGKEVNHEQD-------AEENQSSTSKQEQDGKMSLGQAQSGDSDFAADFSAAKVAAMK 360
           SLGKEVNHEQD       AEENQSSTSKQEQDGKMSLGQAQSGDSDFAADFSAAKVAAMK
Sbjct: 301 SLGKEVNHEQDVMKFDYAAEENQSSTSKQEQDGKMSLGQAQSGDSDFAADFSAAKVAAMK 360

Query: 361 AAELVNKNLVGVGYMTTDQKKKLLWGSKKSSAVEESGHHQWDTALFTDRERQEKFNKLMG 416
           AAELVNKNLVGVGYMTTDQKKKLLWGSKKSSAVEESGHHQWDTALFTDRERQEKFNKLM 
Sbjct: 361 AAELVNKNLVGVGYMTTDQKKKLLWGSKKSSAVEESGHHQWDTALFTDRERQEKFNKLMS 420

[Close]

BLAST of Carg24091-RA vs. ExPASy TrEMBL
Match: A0A6J1HRP4 (arginine/serine-rich coiled-coil protein 2 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111467184 PE=4 SV=1)

HSP 1 Score: 757.7 bits (1955), Expect = 2.9e-215
Identity = 403/415 (97.11%), Postives = 410/415 (98.80%), Query Frame = 0


Query: 1   MENNGIKAEFRKPSSETVGRKYRRRSSVSGSSSSDESPKRDRSYSPKLSRDDASKDSERK 60
           MENNGIKAEFRKPSSETVGRKYRRRSSVSGSSSSDESPKRD SYSPKLSRDDASKDSERK
Sbjct: 1   MENNGIKAEFRKPSSETVGRKYRRRSSVSGSSSSDESPKRDCSYSPKLSRDDASKDSERK 60

Query: 61  PRRKEDERELNKDSGNHHSRNSDSYRYSDRKSSRTSHGYSRHDDYARHDKYADEDKDYER 120
           PRRKEDERELNKDSGNHHSRNSDSYRYSDRKSSRTSHGYSRHDDYARHDKYADEDKDYER
Sbjct: 61  PRRKEDERELNKDSGNHHSRNSDSYRYSDRKSSRTSHGYSRHDDYARHDKYADEDKDYER 120

Query: 121 LSSRSGRESKGGGHYDHTRRDSEHFRSRDYSRDIVKSSRDKYDGSGHRSRDGDSLSEKHG 180
           LSSRSGRE+KG GHYDHTRRDSEHFRSRD+SRD+ KSSRDKYDGSGHRSRDGDSLSEKHG
Sbjct: 121 LSSRSGREAKGAGHYDHTRRDSEHFRSRDFSRDVEKSSRDKYDGSGHRSRDGDSLSEKHG 180

Query: 181 SGSRRHVSSKEMEKHRNIRDRDGRDEKRDNMKHSRDYKNERVLSHDNARGNQYDSFLGRD 240
           SGSRRHVSSKEMEKHRNIRDRDGRDEKRDNMKHSRDYKNERVLSHDNARGNQYDSFLGRD
Sbjct: 181 SGSRRHVSSKEMEKHRNIRDRDGRDEKRDNMKHSRDYKNERVLSHDNARGNQYDSFLGRD 240

Query: 241 ESKHCTKEIHKSDQKDLDDEKFAKDERKYDGRETHWDKGHGKAVLVNENQGLPAKKPKLV 300
           ESKHCTKEIHKSDQK+LDDEKFAKDERKYDGR+THWDKGHGKAVLVNENQGLPAKKPKLV
Sbjct: 241 ESKHCTKEIHKSDQKNLDDEKFAKDERKYDGRDTHWDKGHGKAVLVNENQGLPAKKPKLV 300

Query: 301 SLGKEVNHEQDAEENQSSTSKQEQDGKMSLGQAQSGDSDFAADFSAAKVAAMKAAELVNK 360
           SLGKEVNHEQD EENQSSTSKQEQDGKMSLGQAQSGDSDFAADFSAAKVAAMKAAELVNK
Sbjct: 301 SLGKEVNHEQDDEENQSSTSKQEQDGKMSLGQAQSGDSDFAADFSAAKVAAMKAAELVNK 360

Query: 361 NLVGVGYMTTDQKKKLLWGSKKSSAVEESGHHQWDTALFTDRERQEKFNKLMGVK 416
           NLVGVGYMTTDQKKKLLWGSKKSSAVEESGHHQWDTALFTDRERQEKFNKLM ++
Sbjct: 361 NLVGVGYMTTDQKKKLLWGSKKSSAVEESGHHQWDTALFTDRERQEKFNKLMSLR 415

[Close]

BLAST of Carg24091-RA vs. TAIR 10
Match: AT3G56720.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages. )

HSP 1 Score: 191.8 bits (486), Expect = 1.2e-48
Identity = 191/460 (41.52%), Postives = 239/460 (51.96%), Query Frame = 0


Query: 10  FRKPSSETVGRKYRRRS-SVSGSSSSDESPKRDRSYSPKLSRDDASKDSERKPRRKEDER 69
           FRKPS++   RKYRRR+ +  GSSSSD SP+R++S +PK SR    KDSE    RKED  
Sbjct: 20  FRKPSNDGTSRKYRRRALADDGSSSSDGSPERNQSPNPKHSR----KDSEPVHVRKEDRW 79

Query: 70  ELNKDSGNHHSRNSDSYRYSDRKSSRTSHGYSRHDDYARHDKYADEDKDYERLSSRSGRE 129
           E   D   +     DS+R+ DR S   ++GY R D+Y RH + A            + R+
Sbjct: 80  E--SDRSRYGRGGVDSHRH-DRYSRDDNYGYKR-DEYNRHGRDA----------RSTSRD 139

Query: 130 SKGGGHYDHTRRDSEHFRSRDYSRDIVKSSRDKYDGSGHRSRDGDSLSEKHGSGSRRHVS 189
           S+GG H D  R ++E+ R R+   D  +SS DKY  SGHR +  +   +   S  RRH  
Sbjct: 140 SRGGRHSDRRRVETEYSRLRN---DSDRSSHDKYSNSGHRVKSNEKGEDL--SSGRRHSD 199

Query: 190 SKEMEKHRNIRDRDGRDEKRD-NMKHSRDYKNERVLSHDNARGNQYDSFLGRDESKHCTK 249
           S+       + D + R  +     +HSR  + E                   D      K
Sbjct: 200 SR-------VEDNEKRGSRWGFGDRHSRVERKEH-----------------EDPEISKEK 259

Query: 250 EIHKSDQKDLDDEKFAKDERKYDGRETHWDKGHGKAVLVNENQGLPAKKPKLVSLGKEVN 309
           E+H    +D  D K    E     R+TH                  +KK K     K   
Sbjct: 260 EVHVKSSRDRSDGKCLATE----DRDTH------------------SKKLKGFISDKFTT 319

Query: 310 HEQDAEENQSSTSKQEQDGKMSLGQAQSGDSDFAADFSAAKVAAMKAAELVNKNLVGVGY 369
              +AEE Q+S  K                     D  AAKVAAM+AAELVNKNLVG GY
Sbjct: 320 GNTNAEEKQTSILKPS-----------------PGDVDAAKVAAMQAAELVNKNLVGTGY 379

Query: 370 MTTDQKKKLLWGSKKSSAVEESGHHQWD--TALFTDRERQEKFNKLMGVKGELKTEPQPT 429
           +TTDQKKKLLWG KKS+A EES  H+WD  +AL  D ERQEKFNKLMGVK ++  + Q  
Sbjct: 380 LTTDQKKKLLWGKKKSTASEESA-HRWDNASALIGDPERQEKFNKLMGVKAKVVNQEQNL 387

Query: 430 NQDGSELLRAEKQKELQMDLEKQYTAGLRRRDGRTVGLGL 466
            +     + AEKQKELQMDLEKQYTAGLRRRDGRTVGLGL
Sbjct: 440 GE-----VEAEKQKELQMDLEKQYTAGLRRRDGRTVGLGL 387

[Close]

BLAST of Carg24091-RA vs. TAIR 10
Match: AT3G56720.1 (unknown protein; Has 6239 Blast hits to 4635 proteins in 365 species: Archae - 6; Bacteria - 230; Metazoa - 3389; Fungi - 659; Plants - 656; Viruses - 13; Other Eukaryotes - 1286 (source: NCBI BLink). )

HSP 1 Score: 186.4 bits (472), Expect = 5.1e-47
Identity = 187/460 (40.65%), Postives = 240/460 (52.17%), Query Frame = 0


Query: 10  FRKPSSETVGRKYRRRS-SVSGSSSSDESPKRDRSYSPKLSRDDASKDSERKPRRKEDER 69
           FRKPS++   RKYRRR+ +  GSSSSD SP+R++S +PK SR    KDSE    RKED  
Sbjct: 20  FRKPSNDGTSRKYRRRALADDGSSSSDGSPERNQSPNPKHSR----KDSEPVHVRKEDRW 79

Query: 70  ELNKDSGNHHSRNSDSYRYSDRKSSRTSHGYSRHDDYARHDKYADEDKDYERLSSRSGRE 129
           E   D   +     DS+R+ DR S   ++GY R D+Y RH + A            + R+
Sbjct: 80  E--SDRSRYGRGGVDSHRH-DRYSRDDNYGYKR-DEYNRHGRDA----------RSTSRD 139

Query: 130 SKGGGHYDHTRRDSEHFRSRDYSRDIVKSSRDKYDGSGHRSRDGDSLSEKHGSGSRRHVS 189
           S+GG H D  R ++E+ R R+   D  +SS DKY  SGHR +  +   +   S  RRH  
Sbjct: 140 SRGGRHSDRRRVETEYSRLRN---DSDRSSHDKYSNSGHRVKSNEKGEDL--SSGRRHSD 199

Query: 190 SKEMEKHRNIRDRDGRDEKRD-NMKHSRDYKNERVLSHDNARGNQYDSFLGRDESKHCTK 249
           S+       + D + R  +     +HSR  + E                   D      K
Sbjct: 200 SR-------VEDNEKRGSRWGFGDRHSRVERKEH-----------------EDPEISKEK 259

Query: 250 EIHKSDQKDLDDEKFAKDERKYDGRETHWDKGHGKAVLVNENQGLPAKKPKLVSLGKEVN 309
           E+H    +D  D K    E     R+TH  K  G                          
Sbjct: 260 EVHVKSSRDRSDGKCLATE----DRDTHSKKLKGFI------------------------ 319

Query: 310 HEQDAEENQSSTSKQEQDGKMSLGQAQSGDSDFAADFSAAKVAAMKAAELVNKNLVGVGY 369
                  ++ +T    ++ + S+ +   GD D      AAKVAAM+AAELVNKNLVG GY
Sbjct: 320 ------SDKFTTGNTNEEKQTSILKPSPGDVD------AAKVAAMQAAELVNKNLVGTGY 379

Query: 370 MTTDQKKKLLWGSKKSSAVEESGHHQWD--TALFTDRERQEKFNKLMGVKGELKTEPQPT 429
           +TTDQKKKLLWG KKS+A EES  H+WD  +AL  D ERQEKFNKLMGVK ++  + Q  
Sbjct: 380 LTTDQKKKLLWGKKKSTASEESA-HRWDNASALIGDPERQEKFNKLMGVKAKVVNQEQNL 386

Query: 430 NQDGSELLRAEKQKELQMDLEKQYTAGLRRRDGRTVGLGL 466
            +     + AEKQKELQMDLEKQYTAGLRRRDGRTVGLGL
Sbjct: 440 GE-----VEAEKQKELQMDLEKQYTAGLRRRDGRTVGLGL 386

[Close]

BLAST of Carg24091-RA vs. TAIR 10
Match: AT3G56720.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages. )

HSP 1 Score: 129.8 bits (325), Expect = 5.7e-30
Identity = 152/410 (37.07%), Postives = 202/410 (49.27%), Query Frame = 0


Query: 10  FRKPSSETVGRKYRRRS-SVSGSSSSDESPKRDRSYSPKLSRDDASKDSERKPRRKEDER 69
           FRKPS++   RKYRRR+ +  GSSSSD SP+R++S +PK SR    KDSE    RKED  
Sbjct: 20  FRKPSNDGTSRKYRRRALADDGSSSSDGSPERNQSPNPKHSR----KDSEPVHVRKEDRW 79

Query: 70  ELNKDSGNHHSRNSDSYRYSDRKSSRTSHGYSRHDDYARHDKYADEDKDYERLSSRSGRE 129
           E   D   +     DS+R+ DR S   ++GY R D+Y RH + A            + R+
Sbjct: 80  E--SDRSRYGRGGVDSHRH-DRYSRDDNYGYKR-DEYNRHGRDA----------RSTSRD 139

Query: 130 SKGGGHYDHTRRDSEHFRSRDYSRDIVKSSRDKYDGSGHRSRDGDSLSEKHGSGSRRHVS 189
           S+GG H D  R ++E+ R R+   D  +SS DKY  SGHR +  +   +   S  RRH  
Sbjct: 140 SRGGRHSDRRRVETEYSRLRN---DSDRSSHDKYSNSGHRVKSNEKGEDL--SSGRRHSD 199

Query: 190 SKEMEKHRNIRDRDGRDEKRD-NMKHSRDYKNERVLSHDNARGNQYDSFLGRDESKHCTK 249
           S+       + D + R  +     +HSR  + E                   D      K
Sbjct: 200 SR-------VEDNEKRGSRWGFGDRHSRVERKEH-----------------EDPEISKEK 259

Query: 250 EIHKSDQKDLDDEKFAKDERKYDGRETHWDKGHGKAVLVNENQGLPAKKPKLVSLGKEVN 309
           E+H    +D  D K    E     R+TH  K  G                          
Sbjct: 260 EVHVKSSRDRSDGKCLATE----DRDTHSKKLKGFI------------------------ 319

Query: 310 HEQDAEENQSSTSKQEQDGKMSLGQAQSGDSDFAADFSAAKVAAMKAAELVNKNLVGVGY 369
                  ++ +T    ++ + S+ +   GD D      AAKVAAM+AAELVNKNLVG GY
Sbjct: 320 ------SDKFTTGNTNEEKQTSILKPSPGDVD------AAKVAAMQAAELVNKNLVGTGY 341

Query: 370 MTTDQKKKLLWGSKKSSAVEESGHHQWD--TALFTDRERQEKFNKLMGVK 416
           +TTDQKKKLLWG KKS+A EES  H+WD  +AL  D ERQEKFNKLM ++
Sbjct: 380 LTTDQKKKLLWGKKKSTASEESA-HRWDNASALIGDPERQEKFNKLMSLR 341

The following BLAST results are available for this feature:

BLAST of Carg24091-RA vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7033583.1	1.7e-249	100.00	hypothetical protein SDJN02_03307 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6603305.1	1.8e-248	99.57	hypothetical protein SDJN03_03914, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022932886.1	2.0e-247	98.52	arginine/serine-rich coiled-coil protein 2-like isoform X3 [Cucurbita moschata]	[more]
XP_023544469.1	1.3e-246	98.09	arginine/serine-rich coiled-coil protein 2-like isoform X2 [Cucurbita pepo subsp...	[more]
XP_022967758.1	8.9e-243	96.61	arginine/serine-rich coiled-coil protein 2 isoform X3 [Cucurbita maxima]	[more]

BLAST of Carg24091-RA vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg24091-RA vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EXM0	9.9e-248	98.52	arginine/serine-rich coiled-coil protein 2-like isoform X3 OS=Cucurbita moschata...	[more]
A0A6J1HW17	4.3e-243	96.61	arginine/serine-rich coiled-coil protein 2 isoform X3 OS=Cucurbita maxima OX=366...	[more]
A0A6J1F3C3	3.9e-220	99.28	arginine/serine-rich coiled-coil protein 2-like isoform X2 OS=Cucurbita moschata...	[more]
A0A6J1EY91	4.8e-218	97.63	arginine/serine-rich coiled-coil protein 2-like isoform X1 OS=Cucurbita moschata...	[more]
A0A6J1HRP4	2.9e-215	97.11	arginine/serine-rich coiled-coil protein 2 isoform X2 OS=Cucurbita maxima OX=366...	[more]

BLAST of Carg24091-RA vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G56720.2	1.2e-48	41.52	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G56720.1	5.1e-47	40.65	unknown protein; Has 6239 Blast hits to 4635 proteins in 365 species: Archae - 6...	[more]
AT3G56720.3	5.7e-30	37.07	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR028124	Small acidic protein-like domain	PFAM	PF15477	SMAP	coord: 394..464 e-value: 5.1E-14 score: 53.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 301..320
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..227
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..337
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 321..337
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 236..282
None	No IPR available	PANTHER	PTHR22426:SF2	ARGININE/SERINE-RICH COILED-COIL PROTEIN 2	coord: 1..464
None	No IPR available	PANTHER	PTHR22426	UNCHARACTERIZED	coord: 1..464

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg24091	Carg24091	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg24091-RA:1	Carg24091-RA:1	exon
Carg24091-RA:2	Carg24091-RA:2	exon
Carg24091-RA:3	Carg24091-RA:3	exon
Carg24091-RA:4	Carg24091-RA:4	exon
Carg24091-RA:5	Carg24091-RA:5	exon
Carg24091-RA:6	Carg24091-RA:6	exon
Carg24091-RA:7	Carg24091-RA:7	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg24091-RA:five_prime_utr	Carg24091-RA:five_prime_utr	five_prime_UTR
Carg24091-RA:five_prime_utr	Carg24091-RA:five_prime_utr_2	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg24091-RA:cds	Carg24091-RA:cds	CDS
Carg24091-RA:cds	Carg24091-RA:cds_2	CDS
Carg24091-RA:cds	Carg24091-RA:cds_3	CDS
Carg24091-RA:cds	Carg24091-RA:cds_4	CDS
Carg24091-RA:cds	Carg24091-RA:cds_5	CDS
Carg24091-RA:cds	Carg24091-RA:cds_6	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg24091-RA:three_prime_utr	Carg24091-RA:three_prime_utr	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg24091-RA	Carg24091-RA-protein	polypeptide