Carg23413-RA (mRNA) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg23413-RA
Type	mRNA
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	26S proteasome non-ATPase regulatory subunit 13-like protein A
Location	Carg_Chr06: 3125863 .. 3130216 (+)
Sequence length	2259
RNA-Seq Expression	Carg23413-RA
Synteny	Carg23413-RA

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCCATTCTTTTCTTTGAGAACAAGAAAAAACAGAGGAAGAGGCCCAAGTTTTATAAATCGGAGCTCTCGTTTTTTTCCCTTACAGAATCCATAGCCGGAATAGCAGCCATGGCCGCTTTACAGTACCTCGATTCGCTTCGTATCTCGCATCCTGAACTCGCGGAATGGTACAATTCGCTCGCAGATCTGTACCAGAAGAAGCTTTGGCATCAACTCACACTCAAGCTTGAGCAATTTGTCGCCCTGACCGTCTTCCAGGTCGGTTTCTTTAACTTAGTACGTTTTTAATGGATATTTTAACATTTTAATTTCATGAGTTTGTGTTAGTATTTTCAGCTTTTAGATGCTTTGGTTTCTTGATGGATGCTGTTAGGGTTTTGAGTCTGCAAATGTTAAGATTGAGTTTTTTATGGCGAAATCAATGGAAATTTAGGGTTCTTTAAACGGAGAGGATCGTGGAGTTGGGGTTTTTGTTATAGCGGTTCTTTTAGCTTACTGAAATTTGGATTCGGAGTAGTTGAAATGTAAAGTACCCCCCACATTTCGGTTGTTGGAGCTTTTAAGTTAGAATGATCGACTGAATGTGGGGCATTTCTTAGTTGGAGCGTTACGACTTTACTCATTTGTAAAGAATTGATTGAGAATAAGTTTTTGTTAGACTAAAGTAGAGCAAGAAATTGTCTCCCAATATTTGCCATGTAATTTTCTTTACATTTCTTGTTCATAACCTGCATGTTAGGTTTATGTGATAGAGAAGTGTTGAGGCTTTAGTCGAAAGATCAAAGTCGCCTTAGCCTACCATGAACAACTTAAGCGTTTTGGTAGATAGTAAGCATGAACTGGGGTCTTTGTTAATTCTTGAGTTTGACTGACTTGCTCTCCTTTTTCTTAAAGAATACGATCTTTGGATGTTGAGACTAAGGAGAGGATAATTGTTGTATTCAATGGGTATTGCTTTAGAGCTGAAAAAGTTTTAAATTATTTTGAGCCAGCGAATGTATGTTTTATCTGGTGAATCCTTGTATATTTGAATATTCAGTTGAATTTTACCAAAATTTCATGATTTATCTACCTCTCTTTATGCAGGAACCCCATATTCAATTAATATTTTGTGTGTTTAAATGTTCAGGCTGGTGATGCACTGATTCAGTTGTATCACAACTTCATCACTGATTTTGAGACCAAAATCAATCTTCTCAAGCTTGCACATTTTGCGGTGATTGTTTCTCGGCAATATGCAGAGAAAGAAGCTGCTATTAGTTATCTTGAAGGGATAATCGAGAAGCTAAGGAGCACTAAAGAGCAGCGCATAGAGGAGCCCATCCTTTATATTAAGATGCAAATAGCTGTTTTTAAGCTCGAGCAAGGTGACCGAAAAGAGTGCAAGAAACTTTTGGAGGATGGGAAGAGCACTCTTGACAGCATGACCGACATTGATCCATCTGTCTATGCTAGCTATTACTGGGTTTCATCTCAGTTTTATAAGTTTCGCCAAGAGTTTGCTGAGTTCTATAAAAGTGCTCTTCTTTATCTGGCATATACTTCAGTGGAGTCACTGTCGGACTCTTTTAAATTGGTATGATGAATAGTTTTCGTTGTGTACAGTTCATTATCTTTTTATAACCTTTTTTCCCTTTCAAACAAGATACTGGCTCAGATCATAATATCCAACGCTTGATGGGTTCTTATCCTCTATCCATACTTGGCTCATGTTTTTATTTCGTTATTTAAATTATTGCCTGTTGTTGTCCTTGTAGGATTTGGCCTTTGATTTGTCTCTTTCTGCACTTCTGGGAGATAACATCTACAACTTTGGGGAGCTTCTTGCACATCCTATTGTGAGAATTTGCACCGTAGTTCATTATTATTCTGCTCTCTTTATATAATATTTTGCATTGCCTTCAAGGGTTTATGTTGATCTTTTCTCCTTGAGGTGGAGTAAACTAAAATATCACTGTTTTTTTTAACAAATAATTTAATGTGAGGATGAGTACAATGGCCTTCGTATTTATAACATGATTAACATCCTGCAATCCTTATCATTGCTATCTTTGTGTGAATATTGTTGCCAATACTTAATCTTTTCATGCCTCTATTTATTTTGAACTTCAAACCTGATATGTGTGTGTAACTTCTTGTTGTTCAGATTAAAAGTCTGTTGGGCACAAAGGTCGAGTGGCTGTACTACATACTTCAGGCATTCAATGCGGGTGATTTAGTTCGCTATCAAGAATTGTGTCAAGTGCATAATGCAGCTTTAAGGGCTCAACCAGCTTTAGTTGAGAATGAGAAGAAACTATTGGAAAAAATCAACATTCTCTGCCTTATGGAAATTATCTTCAGGCATGCAGGCTTTGCTCCTTTGTCTGTTGGTTATCTGCCCAATATCTTGATTTTTCTATATCATTTTTGTGCTAATTTGGTTTTGTTGCAGCCGGCCATCCGAAGATCGGACTATTCCATTGAAGGTTATAGCAGAAAGGACAAAACTTTCTATAGAGGATGTGGAGCATCTACTAATGAAGAGCCTCTCTGTAAGTATCACTTGTAGTTATTTTCTCCGAAGAATTGGTTCAAATCTGTCCACGAACTTGGTCACTTGAAATTAAAATAAGTTGGCCAAGAGAAACTTTGATGCACCAAAGGAAAAGCAGCAGTGATATTATTTTGGAAGGCATAAAAGTTTGTTTTAGATTAGTTTTTAACATACGGGGTGAATTCGAATTTACAATCTTTTATTTGAGGGTATATGCTTTAATCTGACCGAGCTATATTCAAGTTGGCAAATTCTTTCTAGATTAAATATGGAGAAAAATCAGTAAGTTGGATGAATGAAAAGAAAGCTCGTTTTGTTGAAATAAACTATTTTATCATAACTTTCTAGGCAGTTGAAAAAAAAAAAAAAAAAAACGAACCATTCATTCATTGACAATGCTGAAAGGGAGCATTAAGCTTTGTATTTCTGTGTGGTGAATGCTATGAGGTGCAACTACAGATCTGACCTTTTCTGATGAATTCCTCTTCTTAACTTGTGGCCTTACTGATTTCATAATCACCATGATTGAATTTTGATGCGTATACGAGCCAATTCAAACAGGACTTATTGCTATTAGGTCGTTTACCAATGTCAGTAGTTGATGATTATACAATTGTTACGGGAAGACCAATGAAAGAAAAACTGAATGTTTTTTATTTGCAGGTCCACCTTATAGAAGGTATAATCGATCAAGTCGAGGGGACAGTGCATGTTTCCTGGGTGCAACCTAGAGTTCTGGGCATTCAACAGATCAAATCCCTTCGAAACCGGCTAGACAACTGGGTGGATAAAGTACATTCGACTTTGCTTTCAGTTGAGGCCGAGACCCCCGATCTAGTCGCATCATAATCCTCTTCATTTCATATCGAAACAACTTAGCGAAGGAGAAAGAAGGGGAGAGGGACAAAACAAAAGCCAGGGACCAACTGATCCTTTCTATAATGTTCATGTGCTGGTTGGTTTTCAAGCTGTCTTTTCATCTTACCTACTGCTTTCTTGAACTATTTTTTAGGAAGCAGAAGCCTCTACTTCAGTCTAGTTAGTTTTAAAAGTGAGCATGAATTGGAGGAGTAGAGAACAGACTTAAGATTGGATATTATACTTCTGTATTTGTTACTTTTTTTTTGCATACAATTGAGTTTTACTGAGCTGAATGCTAATCAATTTTCTTATAACAAAACTTTAAAGTAGGAAGAACATAGGGCTGCAGGCTTGCTATATGGCATGAGAAGATATCGAACTTCAAAAAATGGCAAGAACAACCTTATTCGATCCGAGGAGAGGTAAGAGGAAAGTGAAGCTCATGTTTTTCTTCCTTTTTTGGGCTCACTTTTGACACTATTTATGAAACTAGTACAAGAAATCTCTGTTCATCATCATTGTTGTCTAACAAATGGAGATGAGCTCACCTGTGCTATAGAAGGAATCCTCAGGTCCAAAGTAGTTCTCTTCTTTCTCGTCGTCCCACTTAACAACTTCTCTTATATACTTGAATGCTTCGTCGATAGTCACTCGGTCCCTTGCTCGAGCTTGCCATACAAAAAGCTTACGACCAGTGATGGATTGATAAAGGTCTTTGAATTTCATGGCTACGTAGTAGTAAGCTTGATGAGAGAGTGACTGGTTGCTGTGCAGCGGTTGAACGGGGCTAAAATCGTTAAACCATTCACAAACATTCAATGACACCCGGTTTACTTTCTCTTCGAAGAGATCGTACTTGTTGAGTATCAAAACAAATGGGGTATCTTTGAAGCAAGGGTGTCGGACCATCGTCTCAAAAAGCTCCTTACTTTGCATCATCTTGTTTTGTAATAGG

mRNA sequence

TTTCCATTCTTTTCTTTGAGAACAAGAAAAAACAGAGGAAGAGGCCCAAGTTTTATAAATCGGAGCTCTCGTTTTTTTCCCTTACAGAATCCATAGCCGGAATAGCAGCCATGGCCGCTTTACAGTACCTCGATTCGCTTCGTATCTCGCATCCTGAACTCGCGGAATGGTACAATTCGCTCGCAGATCTGTACCAGAAGAAGCTTTGGCATCAACTCACACTCAAGCTTGAGCAATTTGTCGCCCTGACCGTCTTCCAGGCTGGTGATGCACTGATTCAGTTGTATCACAACTTCATCACTGATTTTGAGACCAAAATCAATCTTCTCAAGCTTGCACATTTTGCGGTGATTGTTTCTCGGCAATATGCAGAGAAAGAAGCTGCTATTAGTTATCTTGAAGGGATAATCGAGAAGCTAAGGAGCACTAAAGAGCAGCGCATAGAGGAGCCCATCCTTTATATTAAGATGCAAATAGCTGTTTTTAAGCTCGAGCAAGGTGACCGAAAAGAGTGCAAGAAACTTTTGGAGGATGGGAAGAGCACTCTTGACAGCATGACCGACATTGATCCATCTGTCTATGCTAGCTATTACTGGGTTTCATCTCAGTTTTATAAGTTTCGCCAAGAGTTTGCTGAGTTCTATAAAAGTGCTCTTCTTTATCTGGCATATACTTCAGTGGAGTCACTGTCGGACTCTTTTAAATTGGATTTGGCCTTTGATTTGTCTCTTTCTGCACTTCTGGGAGATAACATCTACAACTTTGGGGAGCTTCTTGCACATCCTATTATTAAAAGTCTGTTGGGCACAAAGGTCGAGTGGCTGTACTACATACTTCAGGCATTCAATGCGGGTGATTTAGTTCGCTATCAAGAATTGTGTCAAGTGCATAATGCAGCTTTAAGGGCTCAACCAGCTTTAGTTGAGAATGAGAAGAAACTATTGGAAAAAATCAACATTCTCTGCCTTATGGAAATTATCTTCAGGCATGCAGGCTTTGCTCCTTTCCGGCCATCCGAAGATCGGACTATTCCATTGAAGGTTATAGCAGAAAGGACAAAACTTTCTATAGAGGATGTGGAGCATCTACTAATGAAGAGCCTCTCTGTCCACCTTATAGAAGGTATAATCGATCAAGTCGAGGGGACAGTGCATGTTTCCTGGGTGCAACCTAGAGTTCTGGGCATTCAACAGATCAAATCCCTTCGAAACCGGCTAGACAACTGGGTGGATAAAGTACATTCGACTTTGCTTTCAGTTGAGGCCGAGACCCCCGATCTAGTCGCATCATAATCCTCTTCATTTCATATCGAAACAACTTAGCGAAGGAGAAAGAAGGGGAGAGGGACAAAACAAAAGCCAGGGACCAACTGATCCTTTCTATAATGTTCATGTGCTGGTTGGTTTTCAAGCTGTCTTTTCATCTTACCTACTGCTTTCTTGAACTATTTTTTAGGAAGCAGAAGCCTCTACTTCAGTCTAGTTAGTTTTAAAAGTGAGCATGAATTGGAGGAGTAGAGAACAGACTTAAGATTGGATATTATACTTCTGTATTTGTTACTTTTTTTTTGCATACAATTGAGTTTTACTGAGCTGAATGCTAATCAATTTTCTTATAACAAAACTTTAAAGTAGGAAGAACATAGGGCTGCAGGCTTGCTATATGGCATGAGAAGATATCGAACTTCAAAAAATGGCAAGAACAACCTTATTCGATCCGAGGAGAGGTAAGAGGAAAGTGAAGCTCATGTTTTTCTTCCTTTTTTGGGCTCACTTTTGACACTATTTATGAAACTAGTACAAGAAATCTCTGTTCATCATCATTGTTGTCTAACAAATGGAGATGAGCTCACCTGTGCTATAGAAGGAATCCTCAGGTCCAAAGTAGTTCTCTTCTTTCTCGTCGTCCCACTTAACAACTTCTCTTATATACTTGAATGCTTCGTCGATAGTCACTCGGTCCCTTGCTCGAGCTTGCCATACAAAAAGCTTACGACCAGTGATGGATTGATAAAGGTCTTTGAATTTCATGGCTACGTAGTAGTAAGCTTGATGAGAGAGTGACTGGTTGCTGTGCAGCGGTTGAACGGGGCTAAAATCGTTAAACCATTCACAAACATTCAATGACACCCGGTTTACTTTCTCTTCGAAGAGATCGTACTTGTTGAGTATCAAAACAAATGGGGTATCTTTGAAGCAAGGGTGTCGGACCATCGTCTCAAAAAGCTCCTTACTTTGCATCATCTTGTTTTGTAATAGG

Coding sequence (CDS)

ATGGCCGCTTTACAGTACCTCGATTCGCTTCGTATCTCGCATCCTGAACTCGCGGAATGGTACAATTCGCTCGCAGATCTGTACCAGAAGAAGCTTTGGCATCAACTCACACTCAAGCTTGAGCAATTTGTCGCCCTGACCGTCTTCCAGGCTGGTGATGCACTGATTCAGTTGTATCACAACTTCATCACTGATTTTGAGACCAAAATCAATCTTCTCAAGCTTGCACATTTTGCGGTGATTGTTTCTCGGCAATATGCAGAGAAAGAAGCTGCTATTAGTTATCTTGAAGGGATAATCGAGAAGCTAAGGAGCACTAAAGAGCAGCGCATAGAGGAGCCCATCCTTTATATTAAGATGCAAATAGCTGTTTTTAAGCTCGAGCAAGGTGACCGAAAAGAGTGCAAGAAACTTTTGGAGGATGGGAAGAGCACTCTTGACAGCATGACCGACATTGATCCATCTGTCTATGCTAGCTATTACTGGGTTTCATCTCAGTTTTATAAGTTTCGCCAAGAGTTTGCTGAGTTCTATAAAAGTGCTCTTCTTTATCTGGCATATACTTCAGTGGAGTCACTGTCGGACTCTTTTAAATTGGATTTGGCCTTTGATTTGTCTCTTTCTGCACTTCTGGGAGATAACATCTACAACTTTGGGGAGCTTCTTGCACATCCTATTATTAAAAGTCTGTTGGGCACAAAGGTCGAGTGGCTGTACTACATACTTCAGGCATTCAATGCGGGTGATTTAGTTCGCTATCAAGAATTGTGTCAAGTGCATAATGCAGCTTTAAGGGCTCAACCAGCTTTAGTTGAGAATGAGAAGAAACTATTGGAAAAAATCAACATTCTCTGCCTTATGGAAATTATCTTCAGGCATGCAGGCTTTGCTCCTTTCCGGCCATCCGAAGATCGGACTATTCCATTGAAGGTTATAGCAGAAAGGACAAAACTTTCTATAGAGGATGTGGAGCATCTACTAATGAAGAGCCTCTCTGTCCACCTTATAGAAGGTATAATCGATCAAGTCGAGGGGACAGTGCATGTTTCCTGGGTGCAACCTAGAGTTCTGGGCATTCAACAGATCAAATCCCTTCGAAACCGGCTAGACAACTGGGTGGATAAAGTACATTCGACTTTGCTTTCAGTTGAGGCCGAGACCCCCGATCTAGTCGCATCATAA

Protein sequence

MAALQYLDSLRISHPELAEWYNSLADLYQKKLWHQLTLKLEQFVALTVFQAGDALIQLYHNFITDFETKINLLKLAHFAVIVSRQYAEKEAAISYLEGIIEKLRSTKEQRIEEPILYIKMQIAVFKLEQGDRKECKKLLEDGKSTLDSMTDIDPSVYASYYWVSSQFYKFRQEFAEFYKSALLYLAYTSVESLSDSFKLDLAFDLSLSALLGDNIYNFGELLAHPIIKSLLGTKVEWLYYILQAFNAGDLVRYQELCQVHNAALRAQPALVENEKKLLEKINILCLMEIIFRHAGFAPFRPSEDRTIPLKVIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIQQIKSLRNRLDNWVDKVHSTLLSVEAETPDLVAS

Homology

[Close]

BLAST of Carg23413-RA vs. NCBI nr
Match: KAG7028241.1 (26S proteasome non-ATPase regulatory subunit 13-like A [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 762.7 bits (1968), Expect = 1.6e-216
Identity = 393/393 (100.00%), Postives = 393/393 (100.00%), Query Frame = 0


Query: 1   MAALQYLDSLRISHPELAEWYNSLADLYQKKLWHQLTLKLEQFVALTVFQAGDALIQLYH 60
           MAALQYLDSLRISHPELAEWYNSLADLYQKKLWHQLTLKLEQFVALTVFQAGDALIQLYH
Sbjct: 1   MAALQYLDSLRISHPELAEWYNSLADLYQKKLWHQLTLKLEQFVALTVFQAGDALIQLYH 60

Query: 61  NFITDFETKINLLKLAHFAVIVSRQYAEKEAAISYLEGIIEKLRSTKEQRIEEPILYIKM 120
           NFITDFETKINLLKLAHFAVIVSRQYAEKEAAISYLEGIIEKLRSTKEQRIEEPILYIKM
Sbjct: 61  NFITDFETKINLLKLAHFAVIVSRQYAEKEAAISYLEGIIEKLRSTKEQRIEEPILYIKM 120

Query: 121 QIAVFKLEQGDRKECKKLLEDGKSTLDSMTDIDPSVYASYYWVSSQFYKFRQEFAEFYKS 180
           QIAVFKLEQGDRKECKKLLEDGKSTLDSMTDIDPSVYASYYWVSSQFYKFRQEFAEFYKS
Sbjct: 121 QIAVFKLEQGDRKECKKLLEDGKSTLDSMTDIDPSVYASYYWVSSQFYKFRQEFAEFYKS 180

Query: 181 ALLYLAYTSVESLSDSFKLDLAFDLSLSALLGDNIYNFGELLAHPIIKSLLGTKVEWLYY 240
           ALLYLAYTSVESLSDSFKLDLAFDLSLSALLGDNIYNFGELLAHPIIKSLLGTKVEWLYY
Sbjct: 181 ALLYLAYTSVESLSDSFKLDLAFDLSLSALLGDNIYNFGELLAHPIIKSLLGTKVEWLYY 240

Query: 241 ILQAFNAGDLVRYQELCQVHNAALRAQPALVENEKKLLEKINILCLMEIIFRHAGFAPFR 300
           ILQAFNAGDLVRYQELCQVHNAALRAQPALVENEKKLLEKINILCLMEIIFRHAGFAPFR
Sbjct: 241 ILQAFNAGDLVRYQELCQVHNAALRAQPALVENEKKLLEKINILCLMEIIFRHAGFAPFR 300

Query: 301 PSEDRTIPLKVIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIQ 360
           PSEDRTIPLKVIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIQ
Sbjct: 301 PSEDRTIPLKVIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIQ 360

Query: 361 QIKSLRNRLDNWVDKVHSTLLSVEAETPDLVAS 394
           QIKSLRNRLDNWVDKVHSTLLSVEAETPDLVAS
Sbjct: 361 QIKSLRNRLDNWVDKVHSTLLSVEAETPDLVAS 393

[Close]

BLAST of Carg23413-RA vs. NCBI nr
Match: KAA0053009.1 (26S proteasome non-ATPase regulatory subunit 13-like protein A [Cucumis melo var. makuwa])

HSP 1 Score: 747.7 bits (1929), Expect = 5.2e-212
Identity = 385/393 (97.96%), Postives = 389/393 (98.98%), Query Frame = 0


Query: 1   MAALQYLDSLRISHPELAEWYNSLADLYQKKLWHQLTLKLEQFVALTVFQAGDALIQLYH 60
           MAALQYLDSLR SHPELAEWYN+LADLYQKKLWHQLTLKLEQFVALTVFQAGDALIQLYH
Sbjct: 1   MAALQYLDSLRNSHPELAEWYNTLADLYQKKLWHQLTLKLEQFVALTVFQAGDALIQLYH 60

Query: 61  NFITDFETKINLLKLAHFAVIVSRQYAEKEAAISYLEGIIEKLRSTKEQRIEEPILYIKM 120
           NFITDFETKINLLKLAHFAVIVSRQYAEKEAAISYLEGIIEKLRSTKEQRIEEPILYIKM
Sbjct: 61  NFITDFETKINLLKLAHFAVIVSRQYAEKEAAISYLEGIIEKLRSTKEQRIEEPILYIKM 120

Query: 121 QIAVFKLEQGDRKECKKLLEDGKSTLDSMTDIDPSVYASYYWVSSQFYKFRQEFAEFYKS 180
           QIA+FKLEQGDRKECKKLLEDGKSTLDSMTDIDPSVYASYYWVSSQFYKFRQEFAEFYKS
Sbjct: 121 QIAIFKLEQGDRKECKKLLEDGKSTLDSMTDIDPSVYASYYWVSSQFYKFRQEFAEFYKS 180

Query: 181 ALLYLAYTSVESLSDSFKLDLAFDLSLSALLGDNIYNFGELLAHPIIKSLLGTKVEWLYY 240
           ALLYLAYTSVESLSDSFKLDLAFDLSLSALLGDNIYNFGELL HPIIKSLLGTKVEWLYY
Sbjct: 181 ALLYLAYTSVESLSDSFKLDLAFDLSLSALLGDNIYNFGELLGHPIIKSLLGTKVEWLYY 240

Query: 241 ILQAFNAGDLVRYQELCQVHNAALRAQPALVENEKKLLEKINILCLMEIIFRHAGFAPFR 300
           ILQAFN+GDLVRYQELCQVHNAALRAQPALVENEKKLLEKINILCLMEIIFRHAGFA FR
Sbjct: 241 ILQAFNSGDLVRYQELCQVHNAALRAQPALVENEKKLLEKINILCLMEIIFRHAGFASFR 300

Query: 301 PSEDRTIPLKVIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIQ 360
           PSEDRTIPLKVIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVE TVHVSWVQPRVLGIQ
Sbjct: 301 PSEDRTIPLKVIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEETVHVSWVQPRVLGIQ 360

Query: 361 QIKSLRNRLDNWVDKVHSTLLSVEAETPDLVAS 394
           QIKSLR+RLDNWVDKVHSTLLSVEAETPDLVAS
Sbjct: 361 QIKSLRDRLDNWVDKVHSTLLSVEAETPDLVAS 393

[Close]

BLAST of Carg23413-RA vs. NCBI nr
Match: XP_023540477.1 (26S proteasome non-ATPase regulatory subunit 13 homolog A-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023540478.1 26S proteasome non-ATPase regulatory subunit 13 homolog A-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 734.9 bits (1896), Expect = 3.5e-208
Identity = 384/393 (97.71%), Postives = 385/393 (97.96%), Query Frame = 0


Query: 1   MAALQYLDSLRISHPELAEWYNSLADLYQKKLWHQLTLKLEQFVALTVFQAGDALIQLYH 60
           MAALQYLDSLRISHPELAEWYNSLADLYQKKLWHQLTLKLEQFVALTVFQAGDALIQLYH
Sbjct: 1   MAALQYLDSLRISHPELAEWYNSLADLYQKKLWHQLTLKLEQFVALTVFQAGDALIQLYH 60

Query: 61  NFITDFETKINLLKLAHFAVIVSRQYAEKEAAISYLEGIIEKLRSTKEQRIEEPILYIKM 120
           NFITDFETKINLLKLAHFAVIVSRQYAEKEAAISYLEGIIEKLRSTKEQRIEEPILYIKM
Sbjct: 61  NFITDFETKINLLKLAHFAVIVSRQYAEKEAAISYLEGIIEKLRSTKEQRIEEPILYIKM 120

Query: 121 QIAVFKLEQGDRKECKKLLEDGKSTLDSMTDIDPSVYASYYWVSSQFYKFRQEFAEFYKS 180
           QIAVFKLEQGDRKECKKLLEDGKSTLDSMTDIDPSVYASYYWVSSQFYKFRQEFAEFYKS
Sbjct: 121 QIAVFKLEQGDRKECKKLLEDGKSTLDSMTDIDPSVYASYYWVSSQFYKFRQEFAEFYKS 180

Query: 181 ALLYLAYTSVESLSDSFKLDLAFDLSLSALLGDNIYNFGELLAHPIIKSLLGTKVEWLYY 240
           ALLYLAYTSVESLSDSFKLDLAFDLSLSALLGDNIYNFGELLAHPIIKSLLGTKVEWLYY
Sbjct: 181 ALLYLAYTSVESLSDSFKLDLAFDLSLSALLGDNIYNFGELLAHPIIKSLLGTKVEWLYY 240

Query: 241 ILQAFNAGDLVRYQELCQVHNAALRAQPALVENEKKLLEKINILCLMEIIFRHAGFAPFR 300
           ILQAFNAGDLVRYQELCQVHNAALRAQPALVENEKKLLEKINILCLMEIIF        R
Sbjct: 241 ILQAFNAGDLVRYQELCQVHNAALRAQPALVENEKKLLEKINILCLMEIIFS-------R 300

Query: 301 PSEDRTIPLKVIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIQ 360
           PSEDRTIPLKVIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIQ
Sbjct: 301 PSEDRTIPLKVIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIQ 360

Query: 361 QIKSLRNRLDNWVDKVHSTLLSVEAETPDLVAS 394
           QIKSLR+RLDNWVDKVHSTLLSVEAETPDLVAS
Sbjct: 361 QIKSLRDRLDNWVDKVHSTLLSVEAETPDLVAS 386

[Close]

BLAST of Carg23413-RA vs. NCBI nr
Match: XP_022943280.1 (26S proteasome non-ATPase regulatory subunit 13 homolog B-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 733.4 bits (1892), Expect = 1.0e-207
Identity = 383/393 (97.46%), Postives = 385/393 (97.96%), Query Frame = 0


Query: 1   MAALQYLDSLRISHPELAEWYNSLADLYQKKLWHQLTLKLEQFVALTVFQAGDALIQLYH 60
           MAALQYLDSLRISHPELAEWYNSLADLYQKKLWHQLTLKLEQFVALTVFQAGDALIQLYH
Sbjct: 225 MAALQYLDSLRISHPELAEWYNSLADLYQKKLWHQLTLKLEQFVALTVFQAGDALIQLYH 284

Query: 61  NFITDFETKINLLKLAHFAVIVSRQYAEKEAAISYLEGIIEKLRSTKEQRIEEPILYIKM 120
           NFITDFETKINLLKLAHFAVIVSRQYAEKEAAISYLEGIIEKLRSTKEQRIEEPILYIKM
Sbjct: 285 NFITDFETKINLLKLAHFAVIVSRQYAEKEAAISYLEGIIEKLRSTKEQRIEEPILYIKM 344

Query: 121 QIAVFKLEQGDRKECKKLLEDGKSTLDSMTDIDPSVYASYYWVSSQFYKFRQEFAEFYKS 180
           QIAVFKLEQGD+KECKKLLEDGKSTLDSMTDIDPSVYASYYWVSSQFYKFRQEFAEFYKS
Sbjct: 345 QIAVFKLEQGDQKECKKLLEDGKSTLDSMTDIDPSVYASYYWVSSQFYKFRQEFAEFYKS 404

Query: 181 ALLYLAYTSVESLSDSFKLDLAFDLSLSALLGDNIYNFGELLAHPIIKSLLGTKVEWLYY 240
           ALLYLAYTSVESLSDSFKLDLAFDLSLSALLGDNIYNFGELLAHPIIKSLLGTKVEWLYY
Sbjct: 405 ALLYLAYTSVESLSDSFKLDLAFDLSLSALLGDNIYNFGELLAHPIIKSLLGTKVEWLYY 464

Query: 241 ILQAFNAGDLVRYQELCQVHNAALRAQPALVENEKKLLEKINILCLMEIIFRHAGFAPFR 300
           ILQAFNAGDLVRYQELCQVHNAALRAQPALVENEKKLLEKINILCLMEIIF        R
Sbjct: 465 ILQAFNAGDLVRYQELCQVHNAALRAQPALVENEKKLLEKINILCLMEIIFS-------R 524

Query: 301 PSEDRTIPLKVIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIQ 360
           PSEDRTIPLKVIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIQ
Sbjct: 525 PSEDRTIPLKVIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIQ 584

Query: 361 QIKSLRNRLDNWVDKVHSTLLSVEAETPDLVAS 394
           QIKSLR+RLDNWVDKVHSTLLSVEAETPDLVAS
Sbjct: 585 QIKSLRDRLDNWVDKVHSTLLSVEAETPDLVAS 610

[Close]

BLAST of Carg23413-RA vs. NCBI nr
Match: XP_023005791.1 (26S proteasome non-ATPase regulatory subunit 13 homolog A [Cucurbita maxima])

HSP 1 Score: 729.6 bits (1882), Expect = 1.5e-206
Identity = 380/393 (96.69%), Postives = 384/393 (97.71%), Query Frame = 0


Query: 1   MAALQYLDSLRISHPELAEWYNSLADLYQKKLWHQLTLKLEQFVALTVFQAGDALIQLYH 60
           MAALQYLDSLR SHPEL+EWYNSLADLYQKKLWHQLTLKLEQFVALTVFQAGDALIQLYH
Sbjct: 1   MAALQYLDSLRNSHPELSEWYNSLADLYQKKLWHQLTLKLEQFVALTVFQAGDALIQLYH 60

Query: 61  NFITDFETKINLLKLAHFAVIVSRQYAEKEAAISYLEGIIEKLRSTKEQRIEEPILYIKM 120
           NFITDFETKINLLKLAHFAVIVSRQYAEKEAAISYLEGIIEKLRSTKEQRIEEPILYIKM
Sbjct: 61  NFITDFETKINLLKLAHFAVIVSRQYAEKEAAISYLEGIIEKLRSTKEQRIEEPILYIKM 120

Query: 121 QIAVFKLEQGDRKECKKLLEDGKSTLDSMTDIDPSVYASYYWVSSQFYKFRQEFAEFYKS 180
           QI++FKLEQGDRKECKKLLEDGKSTLDSMTDIDPSVYASYYWVSSQFYKFRQEFAEFYKS
Sbjct: 121 QISIFKLEQGDRKECKKLLEDGKSTLDSMTDIDPSVYASYYWVSSQFYKFRQEFAEFYKS 180

Query: 181 ALLYLAYTSVESLSDSFKLDLAFDLSLSALLGDNIYNFGELLAHPIIKSLLGTKVEWLYY 240
           ALLYLAYTSVESLSDSFKLDLAFDLSLSALLGDNIYNFGELLAHPIIKSLLGTKVEWLYY
Sbjct: 181 ALLYLAYTSVESLSDSFKLDLAFDLSLSALLGDNIYNFGELLAHPIIKSLLGTKVEWLYY 240

Query: 241 ILQAFNAGDLVRYQELCQVHNAALRAQPALVENEKKLLEKINILCLMEIIFRHAGFAPFR 300
           ILQAFNAGDLVRYQELCQVHNAALRAQPALVENEKKLLEKINILCLMEIIF        R
Sbjct: 241 ILQAFNAGDLVRYQELCQVHNAALRAQPALVENEKKLLEKINILCLMEIIFS-------R 300

Query: 301 PSEDRTIPLKVIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIQ 360
           PSEDRTIPLKVIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIQ
Sbjct: 301 PSEDRTIPLKVIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIQ 360

Query: 361 QIKSLRNRLDNWVDKVHSTLLSVEAETPDLVAS 394
           QIKSLR+RLDNWVDKVHSTLLSVEAETPDLVAS
Sbjct: 361 QIKSLRDRLDNWVDKVHSTLLSVEAETPDLVAS 386

[Close]

BLAST of Carg23413-RA vs. ExPASy Swiss-Prot
Match: Q8RWF0 (26S proteasome non-ATPase regulatory subunit 13 homolog A OS=Arabidopsis thaliana OX=3702 GN=RPN9A PE=1 SV=1)

HSP 1 Score: 648.7 bits (1672), Expect = 4.3e-185
Identity = 327/393 (83.21%), Postives = 367/393 (93.38%), Query Frame = 0


Query: 1   MAALQYLDSLRISHPELAEWYNSLADLYQKKLWHQLTLKLEQFVALTVFQAGDALIQLYH 60
           MAALQYL+SL+ +HPEL EWYNSLADLYQKKLWHQLTLKLEQF+AL VFQAGDALIQ YH
Sbjct: 1   MAALQYLESLKNTHPELGEWYNSLADLYQKKLWHQLTLKLEQFIALAVFQAGDALIQFYH 60

Query: 61  NFITDFETKINLLKLAHFAVIVSRQYAEKEAAISYLEGIIEKLRSTKEQRIEEPILYIKM 120
           NFITDFETKINLLKLAHFAV+VSRQY+EKEAA+SYLE +IEKLR+TKE RI EPI+YI+ 
Sbjct: 61  NFITDFETKINLLKLAHFAVVVSRQYSEKEAAVSYLESVIEKLRATKEPRITEPIIYIET 120

Query: 121 QIAVFKLEQGDRKECKKLLEDGKSTLDSMTDIDPSVYASYYWVSSQFYKFRQEFAEFYKS 180
           Q A+FKLEQGD+KECKK+L+DGKS+LDSMTDIDPSVYA++YWVSSQ++K RQEF++FYKS
Sbjct: 121 QKALFKLEQGDQKECKKILDDGKSSLDSMTDIDPSVYANFYWVSSQYHKCRQEFSDFYKS 180

Query: 181 ALLYLAYTSVESLSDSFKLDLAFDLSLSALLGDNIYNFGELLAHPIIKSLLGTKVEWLYY 240
           ALLYLAYTSVE LS+SFKLDLAFDLSLSALLG+NIYNFGELLAHPI+KSLLGT VEWLY+
Sbjct: 181 ALLYLAYTSVEDLSESFKLDLAFDLSLSALLGENIYNFGELLAHPILKSLLGTNVEWLYH 240

Query: 241 ILQAFNAGDLVRYQELCQVHNAALRAQPALVENEKKLLEKINILCLMEIIFRHAGFAPFR 300
           ILQAFN GDLV+YQELC+VHNA+L AQPALVENEKKLLEKINILCL+EIIF        R
Sbjct: 241 ILQAFNHGDLVQYQELCRVHNASLIAQPALVENEKKLLEKINILCLIEIIFS-------R 300

Query: 301 PSEDRTIPLKVIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIQ 360
           P+EDRTIPL +IAERTKLSIEDVEHLLMKSLSVHLIEGIIDQV GT++VSW QPRVLGI 
Sbjct: 301 PAEDRTIPLSIIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVNGTIYVSWAQPRVLGIP 360

Query: 361 QIKSLRNRLDNWVDKVHSTLLSVEAETPDLVAS 394
           QIK+LR++LD+WVDKVH+TLLSVEAETPDLVA+
Sbjct: 361 QIKALRDQLDSWVDKVHTTLLSVEAETPDLVAA 386

[Close]

BLAST of Carg23413-RA vs. ExPASy Swiss-Prot
Match: Q8GYA6 (26S proteasome non-ATPase regulatory subunit 13 homolog B OS=Arabidopsis thaliana OX=3702 GN=RPN9B PE=1 SV=1)

HSP 1 Score: 647.1 bits (1668), Expect = 1.3e-184
Identity = 327/393 (83.21%), Postives = 368/393 (93.64%), Query Frame = 0


Query: 1   MAALQYLDSLRISHPELAEWYNSLADLYQKKLWHQLTLKLEQFVALTVFQAGDALIQLYH 60
           MAALQYL+S + +HPEL EWYNSLADLYQKKLWHQLTLKLEQF+AL+VFQAGDALIQLY+
Sbjct: 1   MAALQYLESQKNAHPELGEWYNSLADLYQKKLWHQLTLKLEQFIALSVFQAGDALIQLYN 60

Query: 61  NFITDFETKINLLKLAHFAVIVSRQYAEKEAAISYLEGIIEKLRSTKEQRIEEPILYIKM 120
           NFITDFET+INLLKLAHFAV+VSRQY EKEAA+SYLEG+IEKL++TKE RI EPI YI+ 
Sbjct: 61  NFITDFETRINLLKLAHFAVVVSRQYPEKEAAVSYLEGVIEKLKATKESRINEPISYIET 120

Query: 121 QIAVFKLEQGDRKECKKLLEDGKSTLDSMTDIDPSVYASYYWVSSQFYKFRQEFAEFYKS 180
           QIA+FKLEQGD+KECKK+L+DGKS LDSMTDIDPSVYA+++WVSSQ++K RQEF+EFYK+
Sbjct: 121 QIALFKLEQGDQKECKKILDDGKSLLDSMTDIDPSVYANFFWVSSQYHKVRQEFSEFYKN 180

Query: 181 ALLYLAYTSVESLSDSFKLDLAFDLSLSALLGDNIYNFGELLAHPIIKSLLGTKVEWLYY 240
           ALLYLAYTSV+SLS+SFKLDLAFDLSLSALLG+NIYNFGELLAHPI+KSLLGT VEWLY+
Sbjct: 181 ALLYLAYTSVDSLSESFKLDLAFDLSLSALLGENIYNFGELLAHPILKSLLGTNVEWLYH 240

Query: 241 ILQAFNAGDLVRYQELCQVHNAALRAQPALVENEKKLLEKINILCLMEIIFRHAGFAPFR 300
           ILQAFN GDLV+YQELC+VHNA+L AQPALVENEKKLLEKINILCL+EIIF        R
Sbjct: 241 ILQAFNHGDLVQYQELCRVHNASLSAQPALVENEKKLLEKINILCLIEIIFS-------R 300

Query: 301 PSEDRTIPLKVIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIQ 360
           P+EDRTIPL VIAERTKLSIEDVEHLLMKSLSVHLIEGI+DQV GTV+VSW QPRVLGI 
Sbjct: 301 PAEDRTIPLSVIAERTKLSIEDVEHLLMKSLSVHLIEGILDQVNGTVYVSWAQPRVLGIP 360

Query: 361 QIKSLRNRLDNWVDKVHSTLLSVEAETPDLVAS 394
           QIKSLR++LD+WVDKVH+TLLSVEAETPDLVA+
Sbjct: 361 QIKSLRDQLDSWVDKVHTTLLSVEAETPDLVAA 386

[Close]

BLAST of Carg23413-RA vs. ExPASy Swiss-Prot
Match: Q54NQ0 (26S proteasome non-ATPase regulatory subunit 13 OS=Dictyostelium discoideum OX=44689 GN=psmD13 PE=2 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 4.1e-74
Identity = 151/389 (38.82%), Postives = 239/389 (61.44%), Query Frame = 0


Query: 4   LQYLDSLRISHPELAEWYNSLADLYQKKLWHQLTLKLEQFVALTVFQAGDALIQLYHNFI 63
           L+YL+ L+   P+L++  N++ D Y+ KLWHQLT ++E  +          L   Y NFI
Sbjct: 7   LEYLEHLKKIVPDLSDQINNIKDTYENKLWHQLTKQIEMIIISPQLLEKKELFNFYTNFI 66

Query: 64  TDFETKINLLKLAHFAVIVSRQYAEKEAAISYLEGIIEKLRSTKEQRIEEPILYIKMQIA 123
            DFE K+  L L    + V+RQ+   E+   ++E I +K++  K   I        M + 
Sbjct: 67  RDFENKLRPLSLVEICIAVARQFDTDESR-KFIETISQKVKKDKSAYILTLSYIANMNLR 126

Query: 124 VFKLEQGDRKECKKLLEDGKSTLDSMTDIDPSVYASYYWVSSQFYKFRQEFAEFYKSALL 183
               EQ   ++CKK LE  K  L  +T +D  VY+S+Y VS+ ++  + + +EFYK+AL+
Sbjct: 127 SGVAEQ--LQDCKKTLELAKEELQGVTGLDTIVYSSFYRVSTDYHMAKSQASEFYKNALM 186

Query: 184 YLAYTSVESLSDSFKLDLAFDLSLSALLGDNIYNFGELLAHPIIKSLLGTKVEWLYYILQ 243
           YL+Y  +E++S   +  LA++L ++AL+G+N+Y FG+L+A+PI+K+L G++  WL   L+
Sbjct: 187 YLSYCKLETISQEEQASLAYNLCIAALVGENVYGFGDLIANPILKALEGSQHNWLIAFLK 246

Query: 244 AFNAGDLVRYQELCQVHNAALRAQPALVENEKKLLEKINILCLMEIIFRHAGFAPFRPSE 303
           AFN GD+ +++ L   H   +  Q A+  N +KL +KI+IL L+E+ FR        PS+
Sbjct: 247 AFNIGDIQQFEGLMSQHRDIISTQTAITNNMQKLRQKISILSLLELAFR-------TPSD 306

Query: 304 DRTIPLKVIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIQQIK 363
            R+I    IA+ TKL + ++EHLLMKSLS++LI+G IDQ    +H++WV PR+L + QI 
Sbjct: 307 KRSISFSKIAQATKLPLGEIEHLLMKSLSLNLIKGSIDQTVEIIHITWVTPRILDLNQIN 366

Query: 364 SLRNRLDNWVDKVHSTLLSVEAETPDLVA 393
           S+ NR+  W +K  ++L  VE +T DLVA
Sbjct: 367 SMNNRIAEWTEKAKTSLRLVEDDTVDLVA 385

[Close]

BLAST of Carg23413-RA vs. ExPASy Swiss-Prot
Match: B0BN93 (26S proteasome non-ATPase regulatory subunit 13 OS=Rattus norvegicus OX=10116 GN=Psmd13 PE=1 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 3.0e-69
Identity = 153/386 (39.64%), Postives = 234/386 (60.62%), Query Frame = 0


Query: 6   YLDSLRISHPELAEWYNSLADLYQKKLWHQLTLKLEQFVALTVFQAGDALIQLYHNFITD 65
           +L   + S P  A  ++ L +LY KKLWHQLTL++  FV    F  GD LI+LY NFI++
Sbjct: 7   FLQQSQSSGPGQAAVWHRLEELYTKKLWHQLTLQVLDFVQDPCFAQGDGLIKLYENFISE 66

Query: 66  FETKINLLKLAHFAVIVSRQYAEKEAAISYLEGIIEKLRSTKEQRIEEPILYIKMQIAVF 125
           FE ++N L L    + V RQ  +   A+++LE   EK++S+     +E ++  K  I   
Sbjct: 67  FEHRVNPLSLVEIILHVVRQMTDPNVALTFLEKTREKVKSS-----DEAVILCKTAIGAL 126

Query: 126 KLEQGDRKECKKLLEDGKSTLDSMTDIDPSVYASYYWVSSQFYKFRQEFAEFYKSALLYL 185
           KL  GD +  K+ +ED +  L+++  +  SV++ +Y +SS++Y+     A +YK AL +L
Sbjct: 127 KLNIGDLQATKETIEDVEEMLNNLPGV-TSVHSRFYDLSSKYYQTIGNHASYYKDALRFL 186

Query: 186 AYTSVESLSDSFKLDLAFDLSLSALLGDNIYNFGELLAHPIIKSLLGTKVEWLYYILQAF 245
               ++ L  S + + AF L L+ LLG+ ++NFGELL HP+++SL  T  +WL   L AF
Sbjct: 187 GCVDIKDLPVSEQQERAFTLGLAGLLGEGVFNFGELLMHPVLESLRNTDRQWLIDTLYAF 246

Query: 246 NAGDLVRYQELCQVHNAALRAQPALVENEKKLLEKINILCLMEIIFRHAGFAPFRPSEDR 305
           N+GD+ R+Q L     +A   QP L  NE +LL KI +LCLME+ F        RP+  R
Sbjct: 247 NSGDVDRFQTL----KSAWGQQPDLAANEAQLLRKIQLLCLMEMTFT-------RPANHR 306

Query: 306 TIPLKVIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIQQIKSL 365
            +  + IA+  K+++  VE L+MK+LSV L+ G ID+V+  VH++WVQPRVL +QQIK +
Sbjct: 307 QLTFEEIAKSAKITVNKVELLVMKALSVGLVRGSIDEVDKRVHMTWVQPRVLDLQQIKGM 366

Query: 366 RNRLDNWVDKVHSTLLSVEAETPDLV 392
           ++RL+ W   V S  L VE +  D++
Sbjct: 367 KDRLELWCTDVKSMELLVEHQAQDIL 375

[Close]

BLAST of Carg23413-RA vs. ExPASy Swiss-Prot
Match: Q5E964 (26S proteasome non-ATPase regulatory subunit 13 OS=Bos taurus OX=9913 GN=PSMD13 PE=2 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 3.9e-69
Identity = 153/386 (39.64%), Postives = 233/386 (60.36%), Query Frame = 0


Query: 6   YLDSLRISHPELAEWYNSLADLYQKKLWHQLTLKLEQFVALTVFQAGDALIQLYHNFITD 65
           +L   + S P  A  ++ L +LY KKLWHQLTL++  FV    F  GD LI+LY NFI++
Sbjct: 7   FLQQSQSSGPGQAAVWHRLEELYTKKLWHQLTLQVLDFVQDPCFAQGDGLIKLYENFISE 66

Query: 66  FETKINLLKLAHFAVIVSRQYAEKEAAISYLEGIIEKLRSTKEQRIEEPILYIKMQIAVF 125
           FE ++N L L    + V RQ  +   A+S+LE   EK++S+     +E ++  K  I   
Sbjct: 67  FEHRVNPLSLVEIILHVVRQMTDPNVALSFLEKTREKVKSS-----DEAVILCKTAIGAL 126

Query: 126 KLEQGDRKECKKLLEDGKSTLDSMTDIDPSVYASYYWVSSQFYKFRQEFAEFYKSALLYL 185
           KL  GD +  K+ +ED +  L ++  +  SV++ +Y +SS++Y+     A +YK AL +L
Sbjct: 127 KLNIGDLQVTKETIEDVEEMLSNLPGV-TSVHSRFYDLSSKYYQTIGNHASYYKDALRFL 186

Query: 186 AYTSVESLSDSFKLDLAFDLSLSALLGDNIYNFGELLAHPIIKSLLGTKVEWLYYILQAF 245
               ++ L  S + + AF L L+ LLGD ++NFGELL HP+++SL  T  +WL   L AF
Sbjct: 187 GCVDIKDLPVSEQQERAFTLGLAGLLGDGVFNFGELLMHPVLESLRDTDRQWLIDTLYAF 246

Query: 246 NAGDLVRYQELCQVHNAALRAQPALVENEKKLLEKINILCLMEIIFRHAGFAPFRPSEDR 305
           N+G++ R+Q L      A   QP L  NE +LL KI +LCLME+ F        RP+  R
Sbjct: 247 NSGNVERFQTL----KTAWGQQPDLAANEAQLLRKIQLLCLMEMTFT-------RPANHR 306

Query: 306 TIPLKVIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIQQIKSL 365
            +  + IA   K+++ +VE L+MK+LSV L++G ID+V+  VH++WVQPRVL +QQIK +
Sbjct: 307 QLTFEEIARSAKITVNEVELLVMKALSVGLVKGSIDEVDKRVHMTWVQPRVLDLQQIKGM 366

Query: 366 RNRLDNWVDKVHSTLLSVEAETPDLV 392
           ++RL+ W   V S  + VE +  D++
Sbjct: 367 KDRLEFWCTDVKSMEMLVEHQAHDIL 375

[Close]

BLAST of Carg23413-RA vs. ExPASy TrEMBL
Match: A0A5A7UHJ8 (26S proteasome non-ATPase regulatory subunit 13-like protein A OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold344G001210 PE=3 SV=1)

HSP 1 Score: 747.7 bits (1929), Expect = 2.5e-212
Identity = 385/393 (97.96%), Postives = 389/393 (98.98%), Query Frame = 0


Query: 1   MAALQYLDSLRISHPELAEWYNSLADLYQKKLWHQLTLKLEQFVALTVFQAGDALIQLYH 60
           MAALQYLDSLR SHPELAEWYN+LADLYQKKLWHQLTLKLEQFVALTVFQAGDALIQLYH
Sbjct: 1   MAALQYLDSLRNSHPELAEWYNTLADLYQKKLWHQLTLKLEQFVALTVFQAGDALIQLYH 60

Query: 61  NFITDFETKINLLKLAHFAVIVSRQYAEKEAAISYLEGIIEKLRSTKEQRIEEPILYIKM 120
           NFITDFETKINLLKLAHFAVIVSRQYAEKEAAISYLEGIIEKLRSTKEQRIEEPILYIKM
Sbjct: 61  NFITDFETKINLLKLAHFAVIVSRQYAEKEAAISYLEGIIEKLRSTKEQRIEEPILYIKM 120

Query: 121 QIAVFKLEQGDRKECKKLLEDGKSTLDSMTDIDPSVYASYYWVSSQFYKFRQEFAEFYKS 180
           QIA+FKLEQGDRKECKKLLEDGKSTLDSMTDIDPSVYASYYWVSSQFYKFRQEFAEFYKS
Sbjct: 121 QIAIFKLEQGDRKECKKLLEDGKSTLDSMTDIDPSVYASYYWVSSQFYKFRQEFAEFYKS 180

Query: 181 ALLYLAYTSVESLSDSFKLDLAFDLSLSALLGDNIYNFGELLAHPIIKSLLGTKVEWLYY 240
           ALLYLAYTSVESLSDSFKLDLAFDLSLSALLGDNIYNFGELL HPIIKSLLGTKVEWLYY
Sbjct: 181 ALLYLAYTSVESLSDSFKLDLAFDLSLSALLGDNIYNFGELLGHPIIKSLLGTKVEWLYY 240

Query: 241 ILQAFNAGDLVRYQELCQVHNAALRAQPALVENEKKLLEKINILCLMEIIFRHAGFAPFR 300
           ILQAFN+GDLVRYQELCQVHNAALRAQPALVENEKKLLEKINILCLMEIIFRHAGFA FR
Sbjct: 241 ILQAFNSGDLVRYQELCQVHNAALRAQPALVENEKKLLEKINILCLMEIIFRHAGFASFR 300

Query: 301 PSEDRTIPLKVIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIQ 360
           PSEDRTIPLKVIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVE TVHVSWVQPRVLGIQ
Sbjct: 301 PSEDRTIPLKVIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEETVHVSWVQPRVLGIQ 360

Query: 361 QIKSLRNRLDNWVDKVHSTLLSVEAETPDLVAS 394
           QIKSLR+RLDNWVDKVHSTLLSVEAETPDLVAS
Sbjct: 361 QIKSLRDRLDNWVDKVHSTLLSVEAETPDLVAS 393

[Close]

BLAST of Carg23413-RA vs. ExPASy TrEMBL
Match: A0A6J1FXM4 (26S proteasome non-ATPase regulatory subunit 13 homolog B-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111448071 PE=3 SV=1)

HSP 1 Score: 733.4 bits (1892), Expect = 4.9e-208
Identity = 383/393 (97.46%), Postives = 385/393 (97.96%), Query Frame = 0


Query: 1   MAALQYLDSLRISHPELAEWYNSLADLYQKKLWHQLTLKLEQFVALTVFQAGDALIQLYH 60
           MAALQYLDSLRISHPELAEWYNSLADLYQKKLWHQLTLKLEQFVALTVFQAGDALIQLYH
Sbjct: 225 MAALQYLDSLRISHPELAEWYNSLADLYQKKLWHQLTLKLEQFVALTVFQAGDALIQLYH 284

Query: 61  NFITDFETKINLLKLAHFAVIVSRQYAEKEAAISYLEGIIEKLRSTKEQRIEEPILYIKM 120
           NFITDFETKINLLKLAHFAVIVSRQYAEKEAAISYLEGIIEKLRSTKEQRIEEPILYIKM
Sbjct: 285 NFITDFETKINLLKLAHFAVIVSRQYAEKEAAISYLEGIIEKLRSTKEQRIEEPILYIKM 344

Query: 121 QIAVFKLEQGDRKECKKLLEDGKSTLDSMTDIDPSVYASYYWVSSQFYKFRQEFAEFYKS 180
           QIAVFKLEQGD+KECKKLLEDGKSTLDSMTDIDPSVYASYYWVSSQFYKFRQEFAEFYKS
Sbjct: 345 QIAVFKLEQGDQKECKKLLEDGKSTLDSMTDIDPSVYASYYWVSSQFYKFRQEFAEFYKS 404

Query: 181 ALLYLAYTSVESLSDSFKLDLAFDLSLSALLGDNIYNFGELLAHPIIKSLLGTKVEWLYY 240
           ALLYLAYTSVESLSDSFKLDLAFDLSLSALLGDNIYNFGELLAHPIIKSLLGTKVEWLYY
Sbjct: 405 ALLYLAYTSVESLSDSFKLDLAFDLSLSALLGDNIYNFGELLAHPIIKSLLGTKVEWLYY 464

Query: 241 ILQAFNAGDLVRYQELCQVHNAALRAQPALVENEKKLLEKINILCLMEIIFRHAGFAPFR 300
           ILQAFNAGDLVRYQELCQVHNAALRAQPALVENEKKLLEKINILCLMEIIF        R
Sbjct: 465 ILQAFNAGDLVRYQELCQVHNAALRAQPALVENEKKLLEKINILCLMEIIFS-------R 524

Query: 301 PSEDRTIPLKVIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIQ 360
           PSEDRTIPLKVIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIQ
Sbjct: 525 PSEDRTIPLKVIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIQ 584

Query: 361 QIKSLRNRLDNWVDKVHSTLLSVEAETPDLVAS 394
           QIKSLR+RLDNWVDKVHSTLLSVEAETPDLVAS
Sbjct: 585 QIKSLRDRLDNWVDKVHSTLLSVEAETPDLVAS 610

[Close]

BLAST of Carg23413-RA vs. ExPASy TrEMBL
Match: A0A6J1KVZ6 (26S proteasome non-ATPase regulatory subunit 13 homolog A OS=Cucurbita maxima OX=3661 GN=LOC111498685 PE=3 SV=1)

HSP 1 Score: 729.6 bits (1882), Expect = 7.1e-207
Identity = 380/393 (96.69%), Postives = 384/393 (97.71%), Query Frame = 0


Query: 1   MAALQYLDSLRISHPELAEWYNSLADLYQKKLWHQLTLKLEQFVALTVFQAGDALIQLYH 60
           MAALQYLDSLR SHPEL+EWYNSLADLYQKKLWHQLTLKLEQFVALTVFQAGDALIQLYH
Sbjct: 1   MAALQYLDSLRNSHPELSEWYNSLADLYQKKLWHQLTLKLEQFVALTVFQAGDALIQLYH 60

Query: 61  NFITDFETKINLLKLAHFAVIVSRQYAEKEAAISYLEGIIEKLRSTKEQRIEEPILYIKM 120
           NFITDFETKINLLKLAHFAVIVSRQYAEKEAAISYLEGIIEKLRSTKEQRIEEPILYIKM
Sbjct: 61  NFITDFETKINLLKLAHFAVIVSRQYAEKEAAISYLEGIIEKLRSTKEQRIEEPILYIKM 120

Query: 121 QIAVFKLEQGDRKECKKLLEDGKSTLDSMTDIDPSVYASYYWVSSQFYKFRQEFAEFYKS 180
           QI++FKLEQGDRKECKKLLEDGKSTLDSMTDIDPSVYASYYWVSSQFYKFRQEFAEFYKS
Sbjct: 121 QISIFKLEQGDRKECKKLLEDGKSTLDSMTDIDPSVYASYYWVSSQFYKFRQEFAEFYKS 180

Query: 181 ALLYLAYTSVESLSDSFKLDLAFDLSLSALLGDNIYNFGELLAHPIIKSLLGTKVEWLYY 240
           ALLYLAYTSVESLSDSFKLDLAFDLSLSALLGDNIYNFGELLAHPIIKSLLGTKVEWLYY
Sbjct: 181 ALLYLAYTSVESLSDSFKLDLAFDLSLSALLGDNIYNFGELLAHPIIKSLLGTKVEWLYY 240

Query: 241 ILQAFNAGDLVRYQELCQVHNAALRAQPALVENEKKLLEKINILCLMEIIFRHAGFAPFR 300
           ILQAFNAGDLVRYQELCQVHNAALRAQPALVENEKKLLEKINILCLMEIIF        R
Sbjct: 241 ILQAFNAGDLVRYQELCQVHNAALRAQPALVENEKKLLEKINILCLMEIIFS-------R 300

Query: 301 PSEDRTIPLKVIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIQ 360
           PSEDRTIPLKVIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIQ
Sbjct: 301 PSEDRTIPLKVIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIQ 360

Query: 361 QIKSLRNRLDNWVDKVHSTLLSVEAETPDLVAS 394
           QIKSLR+RLDNWVDKVHSTLLSVEAETPDLVAS
Sbjct: 361 QIKSLRDRLDNWVDKVHSTLLSVEAETPDLVAS 386

[Close]

BLAST of Carg23413-RA vs. ExPASy TrEMBL
Match: A0A5D3CIR4 (26S proteasome non-ATPase regulatory subunit 13-like protein A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G001220 PE=3 SV=1)

HSP 1 Score: 724.9 bits (1870), Expect = 1.8e-205
Identity = 378/393 (96.18%), Postives = 382/393 (97.20%), Query Frame = 0


Query: 1   MAALQYLDSLRISHPELAEWYNSLADLYQKKLWHQLTLKLEQFVALTVFQAGDALIQLYH 60
           MAALQYLDSLR SHPELAEWYN+LADLYQKKLWHQLTLKLEQFVALTVFQAGDALIQLYH
Sbjct: 1   MAALQYLDSLRNSHPELAEWYNTLADLYQKKLWHQLTLKLEQFVALTVFQAGDALIQLYH 60

Query: 61  NFITDFETKINLLKLAHFAVIVSRQYAEKEAAISYLEGIIEKLRSTKEQRIEEPILYIKM 120
           NFITDFETKINLLKLAHFAVIVSRQYAEKEAAISYLEGIIEKLRSTKEQRIEEPILYIKM
Sbjct: 61  NFITDFETKINLLKLAHFAVIVSRQYAEKEAAISYLEGIIEKLRSTKEQRIEEPILYIKM 120

Query: 121 QIAVFKLEQGDRKECKKLLEDGKSTLDSMTDIDPSVYASYYWVSSQFYKFRQEFAEFYKS 180
           QIA+FKLEQGDRKECKKLLEDGKSTLDSMTDIDPSVYASYYWVSSQFYKFRQEFAEFYKS
Sbjct: 121 QIAIFKLEQGDRKECKKLLEDGKSTLDSMTDIDPSVYASYYWVSSQFYKFRQEFAEFYKS 180

Query: 181 ALLYLAYTSVESLSDSFKLDLAFDLSLSALLGDNIYNFGELLAHPIIKSLLGTKVEWLYY 240
           ALLYLAYTSVESLSDSFKLDLAFDLSLSALLGDNIYNFGELL HPIIKSLLGTKVEWLYY
Sbjct: 181 ALLYLAYTSVESLSDSFKLDLAFDLSLSALLGDNIYNFGELLGHPIIKSLLGTKVEWLYY 240

Query: 241 ILQAFNAGDLVRYQELCQVHNAALRAQPALVENEKKLLEKINILCLMEIIFRHAGFAPFR 300
           ILQAFN+GDLVRYQELCQVHNAALRAQPALVENEKKLLEKINILCLMEIIF        R
Sbjct: 241 ILQAFNSGDLVRYQELCQVHNAALRAQPALVENEKKLLEKINILCLMEIIFS-------R 300

Query: 301 PSEDRTIPLKVIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIQ 360
           PSEDRTIPLKVIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVE TVHVSWVQPRVLGIQ
Sbjct: 301 PSEDRTIPLKVIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEETVHVSWVQPRVLGIQ 360

Query: 361 QIKSLRNRLDNWVDKVHSTLLSVEAETPDLVAS 394
           QIKSLR+RLDNWVDKVHSTLLSVEAETPDLVAS
Sbjct: 361 QIKSLRDRLDNWVDKVHSTLLSVEAETPDLVAS 386

[Close]

BLAST of Carg23413-RA vs. ExPASy TrEMBL
Match: A0A1S3BJI3 (26S proteasome non-ATPase regulatory subunit 13 homolog A OS=Cucumis melo OX=3656 GN=LOC103490742 PE=3 SV=1)

HSP 1 Score: 724.9 bits (1870), Expect = 1.8e-205
Identity = 378/393 (96.18%), Postives = 382/393 (97.20%), Query Frame = 0


Query: 1   MAALQYLDSLRISHPELAEWYNSLADLYQKKLWHQLTLKLEQFVALTVFQAGDALIQLYH 60
           MAALQYLDSLR SHPELAEWYN+LADLYQKKLWHQLTLKLEQFVALTVFQAGDALIQLYH
Sbjct: 1   MAALQYLDSLRNSHPELAEWYNTLADLYQKKLWHQLTLKLEQFVALTVFQAGDALIQLYH 60

Query: 61  NFITDFETKINLLKLAHFAVIVSRQYAEKEAAISYLEGIIEKLRSTKEQRIEEPILYIKM 120
           NFITDFETKINLLKLAHFAVIVSRQYAEKEAAISYLEGIIEKLRSTKEQRIEEPILYIKM
Sbjct: 61  NFITDFETKINLLKLAHFAVIVSRQYAEKEAAISYLEGIIEKLRSTKEQRIEEPILYIKM 120

Query: 121 QIAVFKLEQGDRKECKKLLEDGKSTLDSMTDIDPSVYASYYWVSSQFYKFRQEFAEFYKS 180
           QIA+FKLEQGDRKECKKLLEDGKSTLDSMTDIDPSVYASYYWVSSQFYKFRQEFAEFYKS
Sbjct: 121 QIAIFKLEQGDRKECKKLLEDGKSTLDSMTDIDPSVYASYYWVSSQFYKFRQEFAEFYKS 180

Query: 181 ALLYLAYTSVESLSDSFKLDLAFDLSLSALLGDNIYNFGELLAHPIIKSLLGTKVEWLYY 240
           ALLYLAYTSVESLSDSFKLDLAFDLSLSALLGDNIYNFGELL HPIIKSLLGTKVEWLYY
Sbjct: 181 ALLYLAYTSVESLSDSFKLDLAFDLSLSALLGDNIYNFGELLGHPIIKSLLGTKVEWLYY 240

Query: 241 ILQAFNAGDLVRYQELCQVHNAALRAQPALVENEKKLLEKINILCLMEIIFRHAGFAPFR 300
           ILQAFN+GDLVRYQELCQVHNAALRAQPALVENEKKLLEKINILCLMEIIF        R
Sbjct: 241 ILQAFNSGDLVRYQELCQVHNAALRAQPALVENEKKLLEKINILCLMEIIFS-------R 300

Query: 301 PSEDRTIPLKVIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIQ 360
           PSEDRTIPLKVIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVE TVHVSWVQPRVLGIQ
Sbjct: 301 PSEDRTIPLKVIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEETVHVSWVQPRVLGIQ 360

Query: 361 QIKSLRNRLDNWVDKVHSTLLSVEAETPDLVAS 394
           QIKSLR+RLDNWVDKVHSTLLSVEAETPDLVAS
Sbjct: 361 QIKSLRDRLDNWVDKVHSTLLSVEAETPDLVAS 386

[Close]

BLAST of Carg23413-RA vs. TAIR 10
Match: AT5G45620.1 (Proteasome component (PCI) domain protein )

HSP 1 Score: 648.7 bits (1672), Expect = 3.1e-186
Identity = 327/393 (83.21%), Postives = 367/393 (93.38%), Query Frame = 0


Query: 1   MAALQYLDSLRISHPELAEWYNSLADLYQKKLWHQLTLKLEQFVALTVFQAGDALIQLYH 60
           MAALQYL+SL+ +HPEL EWYNSLADLYQKKLWHQLTLKLEQF+AL VFQAGDALIQ YH
Sbjct: 1   MAALQYLESLKNTHPELGEWYNSLADLYQKKLWHQLTLKLEQFIALAVFQAGDALIQFYH 60

Query: 61  NFITDFETKINLLKLAHFAVIVSRQYAEKEAAISYLEGIIEKLRSTKEQRIEEPILYIKM 120
           NFITDFETKINLLKLAHFAV+VSRQY+EKEAA+SYLE +IEKLR+TKE RI EPI+YI+ 
Sbjct: 61  NFITDFETKINLLKLAHFAVVVSRQYSEKEAAVSYLESVIEKLRATKEPRITEPIIYIET 120

Query: 121 QIAVFKLEQGDRKECKKLLEDGKSTLDSMTDIDPSVYASYYWVSSQFYKFRQEFAEFYKS 180
           Q A+FKLEQGD+KECKK+L+DGKS+LDSMTDIDPSVYA++YWVSSQ++K RQEF++FYKS
Sbjct: 121 QKALFKLEQGDQKECKKILDDGKSSLDSMTDIDPSVYANFYWVSSQYHKCRQEFSDFYKS 180

Query: 181 ALLYLAYTSVESLSDSFKLDLAFDLSLSALLGDNIYNFGELLAHPIIKSLLGTKVEWLYY 240
           ALLYLAYTSVE LS+SFKLDLAFDLSLSALLG+NIYNFGELLAHPI+KSLLGT VEWLY+
Sbjct: 181 ALLYLAYTSVEDLSESFKLDLAFDLSLSALLGENIYNFGELLAHPILKSLLGTNVEWLYH 240

Query: 241 ILQAFNAGDLVRYQELCQVHNAALRAQPALVENEKKLLEKINILCLMEIIFRHAGFAPFR 300
           ILQAFN GDLV+YQELC+VHNA+L AQPALVENEKKLLEKINILCL+EIIF        R
Sbjct: 241 ILQAFNHGDLVQYQELCRVHNASLIAQPALVENEKKLLEKINILCLIEIIFS-------R 300

Query: 301 PSEDRTIPLKVIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIQ 360
           P+EDRTIPL +IAERTKLSIEDVEHLLMKSLSVHLIEGIIDQV GT++VSW QPRVLGI 
Sbjct: 301 PAEDRTIPLSIIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVNGTIYVSWAQPRVLGIP 360

Query: 361 QIKSLRNRLDNWVDKVHSTLLSVEAETPDLVAS 394
           QIK+LR++LD+WVDKVH+TLLSVEAETPDLVA+
Sbjct: 361 QIKALRDQLDSWVDKVHTTLLSVEAETPDLVAA 386

[Close]

BLAST of Carg23413-RA vs. TAIR 10
Match: AT4G19006.1 (Proteasome component (PCI) domain protein )

HSP 1 Score: 647.1 bits (1668), Expect = 9.0e-186
Identity = 327/393 (83.21%), Postives = 368/393 (93.64%), Query Frame = 0


Query: 1   MAALQYLDSLRISHPELAEWYNSLADLYQKKLWHQLTLKLEQFVALTVFQAGDALIQLYH 60
           MAALQYL+S + +HPEL EWYNSLADLYQKKLWHQLTLKLEQF+AL+VFQAGDALIQLY+
Sbjct: 1   MAALQYLESQKNAHPELGEWYNSLADLYQKKLWHQLTLKLEQFIALSVFQAGDALIQLYN 60

Query: 61  NFITDFETKINLLKLAHFAVIVSRQYAEKEAAISYLEGIIEKLRSTKEQRIEEPILYIKM 120
           NFITDFET+INLLKLAHFAV+VSRQY EKEAA+SYLEG+IEKL++TKE RI EPI YI+ 
Sbjct: 61  NFITDFETRINLLKLAHFAVVVSRQYPEKEAAVSYLEGVIEKLKATKESRINEPISYIET 120

Query: 121 QIAVFKLEQGDRKECKKLLEDGKSTLDSMTDIDPSVYASYYWVSSQFYKFRQEFAEFYKS 180
           QIA+FKLEQGD+KECKK+L+DGKS LDSMTDIDPSVYA+++WVSSQ++K RQEF+EFYK+
Sbjct: 121 QIALFKLEQGDQKECKKILDDGKSLLDSMTDIDPSVYANFFWVSSQYHKVRQEFSEFYKN 180

Query: 181 ALLYLAYTSVESLSDSFKLDLAFDLSLSALLGDNIYNFGELLAHPIIKSLLGTKVEWLYY 240
           ALLYLAYTSV+SLS+SFKLDLAFDLSLSALLG+NIYNFGELLAHPI+KSLLGT VEWLY+
Sbjct: 181 ALLYLAYTSVDSLSESFKLDLAFDLSLSALLGENIYNFGELLAHPILKSLLGTNVEWLYH 240

Query: 241 ILQAFNAGDLVRYQELCQVHNAALRAQPALVENEKKLLEKINILCLMEIIFRHAGFAPFR 300
           ILQAFN GDLV+YQELC+VHNA+L AQPALVENEKKLLEKINILCL+EIIF        R
Sbjct: 241 ILQAFNHGDLVQYQELCRVHNASLSAQPALVENEKKLLEKINILCLIEIIFS-------R 300

Query: 301 PSEDRTIPLKVIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIQ 360
           P+EDRTIPL VIAERTKLSIEDVEHLLMKSLSVHLIEGI+DQV GTV+VSW QPRVLGI 
Sbjct: 301 PAEDRTIPLSVIAERTKLSIEDVEHLLMKSLSVHLIEGILDQVNGTVYVSWAQPRVLGIP 360

Query: 361 QIKSLRNRLDNWVDKVHSTLLSVEAETPDLVAS 394
           QIKSLR++LD+WVDKVH+TLLSVEAETPDLVA+
Sbjct: 361 QIKSLRDQLDSWVDKVHTTLLSVEAETPDLVAA 386

[Close]

BLAST of Carg23413-RA vs. TAIR 10
Match: AT5G45620.2 (Proteasome component (PCI) domain protein )

HSP 1 Score: 548.1 bits (1411), Expect = 5.7e-156
Identity = 278/335 (82.99%), Postives = 311/335 (92.84%), Query Frame = 0


Query: 1   MAALQYLDSLRISHPELAEWYNSLADLYQKKLWHQLTLKLEQFVALTVFQAGDALIQLYH 60
           MAALQYL+SL+ +HPEL EWYNSLADLYQKKLWHQLTLKLEQF+AL VFQAGDALIQ YH
Sbjct: 1   MAALQYLESLKNTHPELGEWYNSLADLYQKKLWHQLTLKLEQFIALAVFQAGDALIQFYH 60

Query: 61  NFITDFETKINLLKLAHFAVIVSRQYAEKEAAISYLEGIIEKLRSTKEQRIEEPILYIKM 120
           NFITDFETKINLLKLAHFAV+VSRQY+EKEAA+SYLE +IEKLR+TKE RI EPI+YI+ 
Sbjct: 61  NFITDFETKINLLKLAHFAVVVSRQYSEKEAAVSYLESVIEKLRATKEPRITEPIIYIET 120

Query: 121 QIAVFKLEQGDRKECKKLLEDGKSTLDSMTDIDPSVYASYYWVSSQFYKFRQEFAEFYKS 180
           Q A+FKLEQGD+KECKK+L+DGKS+LDSMTDIDPSVYA++YWVSSQ++K RQEF++FYKS
Sbjct: 121 QKALFKLEQGDQKECKKILDDGKSSLDSMTDIDPSVYANFYWVSSQYHKCRQEFSDFYKS 180

Query: 181 ALLYLAYTSVESLSDSFKLDLAFDLSLSALLGDNIYNFGELLAHPIIKSLLGTKVEWLYY 240
           ALLYLAYTSVE LS+SFKLDLAFDLSLSALLG+NIYNFGELLAHPI+KSLLGT VEWLY+
Sbjct: 181 ALLYLAYTSVEDLSESFKLDLAFDLSLSALLGENIYNFGELLAHPILKSLLGTNVEWLYH 240

Query: 241 ILQAFNAGDLVRYQELCQVHNAALRAQPALVENEKKLLEKINILCLMEIIFRHAGFAPFR 300
           ILQAFN GDLV+YQELC+VHNA+L AQPALVENEKKLLEKINILCL+EIIF        R
Sbjct: 241 ILQAFNHGDLVQYQELCRVHNASLIAQPALVENEKKLLEKINILCLIEIIFS-------R 300

Query: 301 PSEDRTIPLKVIAERTKLSIEDVEHLLMKSLSVHL 336
           P+EDRTIPL +IAERTKLSIEDVEHLLMKSLSV +
Sbjct: 301 PAEDRTIPLSIIAERTKLSIEDVEHLLMKSLSVSI 328

[Close]

BLAST of Carg23413-RA vs. TAIR 10
Match: AT3G02200.2 (Proteasome component (PCI) domain protein )

HSP 1 Score: 50.1 bits (118), Expect = 4.8e-06
Identity = 49/204 (24.02%), Postives = 97/204 (47.55%), Query Frame = 0


Query: 187 YTSVESLSDSFKLDLAFDLSLSALL----GDNIYNFGELLAHPIIKSL-LGTKVEWLYYI 246
           Y +  S  D+  LD A + ++ A++      +I+   +LL  P +  L    K   +Y +
Sbjct: 204 YLATFSNEDAQVLDEAKEEAVRAVIEFVKASSIFQC-DLLDLPAVAQLEKDAKYAPVYQL 263

Query: 247 LQAFNAGDLVRYQELCQVHNAALRAQPALVENEKKLLEKINILCLMEIIFRHAGFAPFRP 306
           L+ F    L  Y E    ++  L++      + +  + K+ +L L+++    +G      
Sbjct: 264 LKIFLTQRLNAYTEFQNANSGFLQSYGL---SNEDCVTKMRLLSLVDLASDESG------ 323

Query: 307 SEDRTIPLKVIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIQQ 366
                IP   I +  +++ +DVE  ++K+++  LIE  +DQ+   + VS    R  G +Q
Sbjct: 324 ----KIPYTSIKDTLQVNEQDVELWIVKAITAKLIECKMDQMNQVLIVSRSSEREFGTKQ 383

Query: 367 IKSLRNRLDNWVDKVHSTLLSVEA 386
            +SLR +L  W D + S + ++E+
Sbjct: 384 WQSLRTKLATWKDNISSIITTIES 393

[Close]

BLAST of Carg23413-RA vs. TAIR 10
Match: AT5G15610.2 (Proteasome component (PCI) domain protein )

HSP 1 Score: 45.4 bits (106), Expect = 1.2e-04
Identity = 55/223 (24.66%), Postives = 104/223 (46.64%), Query Frame = 0


Query: 169 KFRQEFAEFYKSALLYLA-YTSVESLSDSFKLDLAFDLSLSALL----GDNIYNFGELLA 228
           K  +E   F K +L ++  Y +  S  D+  L  A + ++ A++      +I+   +LL 
Sbjct: 185 KVLRENKSFAKESLQFVTNYLATFSNEDTQVLSEAKEEAVRAVIEFVKAPSIFQC-DLLD 244

Query: 229 HPIIKSL-LGTKVEWLYYILQAFNAGDLVRYQELCQVHNAALRAQPALVENEKKLLEKIN 288
           HP +  L        +Y +L+ F    L  Y E    ++  L+    LVE +   + K+ 
Sbjct: 245 HPAVAQLEKDPNNAPVYQLLKIFLTQRLDAYMEFQNANSGFLQTY-GLVEED--CVAKMR 304

Query: 289 ILCLMEIIFRHAGFAPFRPSEDRTIPLKVIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQ 348
           +L L+++    +G           IP   I    +++ E+VE  ++K+++  L+   +DQ
Sbjct: 305 LLSLVDLASDDSG----------KIPYASIKNTLQVNDEEVELWVVKAITAKLVACKMDQ 364

Query: 349 VEGTVHVSWVQPRVLGIQQIKSLRNRLDNWVDKVHSTLLSVEA 386
           +   V VS    R  G +Q +SLR +L  W D V + + ++E+
Sbjct: 365 MNQVVIVSRCAEREFGQKQWQSLRTKLAAWRDNVRNVISTIES 393

The following BLAST results are available for this feature:

BLAST of Carg23413-RA vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7028241.1	1.6e-216	100.00	26S proteasome non-ATPase regulatory subunit 13-like A [Cucurbita argyrosperma s...	[more]
KAA0053009.1	5.2e-212	97.96	26S proteasome non-ATPase regulatory subunit 13-like protein A [Cucumis melo var...	[more]
XP_023540477.1	3.5e-208	97.71	26S proteasome non-ATPase regulatory subunit 13 homolog A-like isoform X1 [Cucur...	[more]
XP_022943280.1	1.0e-207	97.46	26S proteasome non-ATPase regulatory subunit 13 homolog B-like isoform X2 [Cucur...	[more]
XP_023005791.1	1.5e-206	96.69	26S proteasome non-ATPase regulatory subunit 13 homolog A [Cucurbita maxima]	[more]

BLAST of Carg23413-RA vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RWF0	4.3e-185	83.21	26S proteasome non-ATPase regulatory subunit 13 homolog A OS=Arabidopsis thalian...	[more]
Q8GYA6	1.3e-184	83.21	26S proteasome non-ATPase regulatory subunit 13 homolog B OS=Arabidopsis thalian...	[more]
Q54NQ0	4.1e-74	38.82	26S proteasome non-ATPase regulatory subunit 13 OS=Dictyostelium discoideum OX=4...	[more]
B0BN93	3.0e-69	39.64	26S proteasome non-ATPase regulatory subunit 13 OS=Rattus norvegicus OX=10116 GN...	[more]
Q5E964	3.9e-69	39.64	26S proteasome non-ATPase regulatory subunit 13 OS=Bos taurus OX=9913 GN=PSMD13 ...	[more]

BLAST of Carg23413-RA vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UHJ8	2.5e-212	97.96	26S proteasome non-ATPase regulatory subunit 13-like protein A OS=Cucumis melo v...	[more]
A0A6J1FXM4	4.9e-208	97.46	26S proteasome non-ATPase regulatory subunit 13 homolog B-like isoform X2 OS=Cuc...	[more]
A0A6J1KVZ6	7.1e-207	96.69	26S proteasome non-ATPase regulatory subunit 13 homolog A OS=Cucurbita maxima OX...	[more]
A0A5D3CIR4	1.8e-205	96.18	26S proteasome non-ATPase regulatory subunit 13-like protein A OS=Cucumis melo v...	[more]
A0A1S3BJI3	1.8e-205	96.18	26S proteasome non-ATPase regulatory subunit 13 homolog A OS=Cucumis melo OX=365...	[more]

BLAST of Carg23413-RA vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G45620.1	3.1e-186	83.21	Proteasome component (PCI) domain protein	[more]
AT4G19006.1	9.0e-186	83.21	Proteasome component (PCI) domain protein	[more]
AT5G45620.2	5.7e-156	82.99	Proteasome component (PCI) domain protein	[more]
AT3G02200.2	4.8e-06	24.02	Proteasome component (PCI) domain protein	[more]
AT5G15610.2	1.2e-04	24.66	Proteasome component (PCI) domain protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM00753	PINT	coord: 272..372 e-value: 4.1E-10 score: 49.6
None	No IPR available	PANTHER	PTHR10539:SF6	26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 13 HOMOLOG B-LIKE	coord: 1..392
IPR000717	Proteasome component (PCI) domain	SMART	SM00088	PINT_4	coord: 272..372 e-value: 4.1E-10 score: 49.6
IPR000717	Proteasome component (PCI) domain	PFAM	PF01399	PCI	coord: 238..350 e-value: 2.6E-9 score: 37.5
IPR000717	Proteasome component (PCI) domain	PROSITE	PS50250	PCI	coord: 174..354 score: 24.127605
IPR035298	26S Proteasome non-ATPase regulatory subunit 13	PANTHER	PTHR10539	26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 13	coord: 1..392
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 305..355

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg23413	Carg23413	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg23413-RA:1	Carg23413-RA:1	exon
Carg23413-RA:2	Carg23413-RA:2	exon
Carg23413-RA:3	Carg23413-RA:3	exon
Carg23413-RA:4	Carg23413-RA:4	exon
Carg23413-RA:5	Carg23413-RA:5	exon
Carg23413-RA:6	Carg23413-RA:6	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg23413-RA:five_prime_utr	Carg23413-RA:five_prime_utr	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg23413-RA:cds	Carg23413-RA:cds	CDS
Carg23413-RA:cds	Carg23413-RA:cds_2	CDS
Carg23413-RA:cds	Carg23413-RA:cds_3	CDS
Carg23413-RA:cds	Carg23413-RA:cds_4	CDS
Carg23413-RA:cds	Carg23413-RA:cds_5	CDS
Carg23413-RA:cds	Carg23413-RA:cds_6	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg23413-RA:three_prime_utr	Carg23413-RA:three_prime_utr	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg23413-RA	Carg23413-RA-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0005829	cytosol
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
cellular_component	GO:0008541	proteasome regulatory particle, lid subcomplex
molecular_function	GO:0005198	structural molecule activity