Carg17911-RA (mRNA) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg17911-RA
Type	mRNA
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	transcription factor MYBS1-like
Location	Carg_Chr10: 1102053 .. 1103475 (-)
Sequence length	1180
RNA-Seq Expression	Carg17911-RA
Synteny	Carg17911-RA

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAACTGGATCAGCTACTACCTGGACTAAAGAAGAAGATAAAGCGTTTGAAAACGCCATAGCTACGCATTGGGCTGGAGAATTGGAAGGGAATAAGGCCTCAGAAGAGATGTGGGAAAACATTGCTTCAATGGTTCCAACCAAGAACATGGAAGACTTGAAGCAGCACTACCAAATGCTGGTGGAAGACGTCGATGCTATTGAGTCCGGCCAAATTCCTATTCCCAACTATGATTCTGTTTCAGAAGAAGCAACTAAAGCCTCTACCAAGGCGAAGGATCATCGTCTTCATCCACATGGAGCTACTGGTTCTGATAGTAATAAAATACCCAATTCTGGTTTTGGAAGTGGGTTTTCTGGGCTCTCCCACGATTCATCTGCCCATGCCACAAAGGGTGGATCCAGGTCTGAACAAGAAAGAAAGAAAGGGATCCCATGGACAGAGGAAGAACACAGGTTAGTGTATTTTCAACAACTTCAGCCATGGAATAATTACTTCGAAATCTGGGTCATTTCATTGAGAGCTATATAATTTATCAATCAATTTAGATTTAAAAAATAACAAATAAATAAATACCTTGTTCTTGTGTTCAGTTCTGCGCGAAATGAACTAGGAATGTCACCATCTTGCCTCCTCTATACGGAGATTCTGTGTGCACAACATAATTGAGAGAGATTCTTAACTATTGCTATTTTCAGGTTATTTCTACTGGGGCTAGACAAGTTTGGGAAAGGGGATTGGAGAAGCATTTCAAGAAACTTCGTTATATCCAGGACACCGACACAAGTGGCCAGTCATGCACAGAAATACTTCATACGATTGAACTCGATGAACAGAGATAGAAGAAGATCAAGTATTCATGACATAACCTCAGTTAATAATGGCGGTGGTGACGTCATGTCCCATCAATCTCCGATCACCGGCCACCAGACAAATGGCCCTAACCAGAGTAATCCGCCGGCTTTGGGGCCACCAGGGAAGCAGGGGCCTCAGCAGCATCTGCCCGGAATCGGCATGTACGGGCCACCTGTTGGACATCCAGTGGCGGCTCGTCCAGGGCACATGGCGTCGGCGGTTGGCACTCCAGTGATGCTTCCTCATGGAATCCATCCCCACCCTCCTTATGTCATGCCACTTGCTTATCCAATGGCACCTCCACCATTGCATCAATGATGATTCTTTTTTCCTTTTTCTAGTCAGATTTTTGGATTCATAGATCAAAATAAGAAATTTGAGGCATAACAAAGAAGAGAAAAAGGTAAAGTTTACATTTCAACTTTTCCTTTCACTTATGATCCATCCGGCTGTATTATGACAAGAATATACCAATATAACGAGACCTGAAAAGTCGCCCTTTTTCAGCATTTCAAGGACGAATATATGAATATGAAATCCAATTTTCATTCACCCATGTTTATGA

mRNA sequence

ATGTCAACTGGATCAGCTACTACCTGGACTAAAGAAGAAGATAAAGCGTTTGAAAACGCCATAGCTACGCATTGGGCTGGAGAATTGGAAGGGAATAAGGCCTCAGAAGAGATGTGGGAAAACATTGCTTCAATGGTTCCAACCAAGAACATGGAAGACTTGAAGCAGCACTACCAAATGCTGGTGGAAGACGTCGATGCTATTGAGTCCGGCCAAATTCCTATTCCCAACTATGATTCTGTTTCAGAAGAAGCAACTAAAGCCTCTACCAAGGCGAAGGATCATCGTCTTCATCCACATGGAGCTACTGGTTCTGATAGTAATAAAATACCCAATTCTGGTTTTGGAAGTGGGTTTTCTGGGCTCTCCCACGATTCATCTGCCCATGCCACAAAGGGTGGATCCAGGTCTGAACAAGAAAGAAAGAAAGGGATCCCATGGACAGAGGAAGAACACAGGTTATTTCTACTGGGGCTAGACAAGTTTGGGAAAGGGGATTGGAGAAGCATTTCAAGAAACTTCGTTATATCCAGGACACCGACACAAGTGGCCAGTCATGCACAGAAATACTTCATACGATTGAACTCGATGAACAGAGATAGAAGAAGATCAAGTATTCATGACATAACCTCAGTTAATAATGGCGGTGGTGACGTCATGTCCCATCAATCTCCGATCACCGGCCACCAGACAAATGGCCCTAACCAGAGTAATCCGCCGGCTTTGGGGCCACCAGGGAAGCAGGGGCCTCAGCAGCATCTGCCCGGAATCGGCATGTACGGGCCACCTGTTGGACATCCAGTGGCGGCTCGTCCAGGGCACATGGCGTCGGCGGTTGGCACTCCAGTGATGCTTCCTCATGGAATCCATCCCCACCCTCCTTATGTCATGCCACTTGCTTATCCAATGGCACCTCCACCATTGCATCAATGATGATTCTTTTTTCCTTTTTCTAGTCAGATTTTTGGATTCATAGATCAAAATAAGAAATTTGAGGCATAACAAAGAAGAGAAAAAGGTAAAGTTTACATTTCAACTTTTCCTTTCACTTATGATCCATCCGGCTGTATTATGACAAGAATATACCAATATAACGAGACCTGAAAAGTCGCCCTTTTTCAGCATTTCAAGGACGAATATATGAATATGAAATCCAATTTTCATTCACCCATGTTTATGA

Coding sequence (CDS)

ATGTCAACTGGATCAGCTACTACCTGGACTAAAGAAGAAGATAAAGCGTTTGAAAACGCCATAGCTACGCATTGGGCTGGAGAATTGGAAGGGAATAAGGCCTCAGAAGAGATGTGGGAAAACATTGCTTCAATGGTTCCAACCAAGAACATGGAAGACTTGAAGCAGCACTACCAAATGCTGGTGGAAGACGTCGATGCTATTGAGTCCGGCCAAATTCCTATTCCCAACTATGATTCTGTTTCAGAAGAAGCAACTAAAGCCTCTACCAAGGCGAAGGATCATCGTCTTCATCCACATGGAGCTACTGGTTCTGATAGTAATAAAATACCCAATTCTGGTTTTGGAAGTGGGTTTTCTGGGCTCTCCCACGATTCATCTGCCCATGCCACAAAGGGTGGATCCAGGTCTGAACAAGAAAGAAAGAAAGGGATCCCATGGACAGAGGAAGAACACAGGTTATTTCTACTGGGGCTAGACAAGTTTGGGAAAGGGGATTGGAGAAGCATTTCAAGAAACTTCGTTATATCCAGGACACCGACACAAGTGGCCAGTCATGCACAGAAATACTTCATACGATTGAACTCGATGAACAGAGATAGAAGAAGATCAAGTATTCATGACATAACCTCAGTTAATAATGGCGGTGGTGACGTCATGTCCCATCAATCTCCGATCACCGGCCACCAGACAAATGGCCCTAACCAGAGTAATCCGCCGGCTTTGGGGCCACCAGGGAAGCAGGGGCCTCAGCAGCATCTGCCCGGAATCGGCATGTACGGGCCACCTGTTGGACATCCAGTGGCGGCTCGTCCAGGGCACATGGCGTCGGCGGTTGGCACTCCAGTGATGCTTCCTCATGGAATCCATCCCCACCCTCCTTATGTCATGCCACTTGCTTATCCAATGGCACCTCCACCATTGCATCAATGA

Protein sequence

MSTGSATTWTKEEDKAFENAIATHWAGELEGNKASEEMWENIASMVPTKNMEDLKQHYQMLVEDVDAIESGQIPIPNYDSVSEEATKASTKAKDHRLHPHGATGSDSNKIPNSGFGSGFSGLSHDSSAHATKGGSRSEQERKKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFIRLNSMNRDRRRSSIHDITSVNNGGGDVMSHQSPITGHQTNGPNQSNPPALGPPGKQGPQQHLPGIGMYGPPVGHPVAARPGHMASAVGTPVMLPHGIHPHPPYVMPLAYPMAPPPLHQ

Homology

[Close]

BLAST of Carg17911-RA vs. NCBI nr
Match: KAG7023245.1 (Transcription factor MYBS1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 622.9 bits (1605), Expect = 1.5e-174
Identity = 310/310 (100.00%), Postives = 310/310 (100.00%), Query Frame = 0


Query: 1   MSTGSATTWTKEEDKAFENAIATHWAGELEGNKASEEMWENIASMVPTKNMEDLKQHYQM 60
           MSTGSATTWTKEEDKAFENAIATHWAGELEGNKASEEMWENIASMVPTKNMEDLKQHYQM
Sbjct: 1   MSTGSATTWTKEEDKAFENAIATHWAGELEGNKASEEMWENIASMVPTKNMEDLKQHYQM 60

Query: 61  LVEDVDAIESGQIPIPNYDSVSEEATKASTKAKDHRLHPHGATGSDSNKIPNSGFGSGFS 120
           LVEDVDAIESGQIPIPNYDSVSEEATKASTKAKDHRLHPHGATGSDSNKIPNSGFGSGFS
Sbjct: 61  LVEDVDAIESGQIPIPNYDSVSEEATKASTKAKDHRLHPHGATGSDSNKIPNSGFGSGFS 120

Query: 121 GLSHDSSAHATKGGSRSEQERKKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTP 180
           GLSHDSSAHATKGGSRSEQERKKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTP
Sbjct: 121 GLSHDSSAHATKGGSRSEQERKKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTP 180

Query: 181 TQVASHAQKYFIRLNSMNRDRRRSSIHDITSVNNGGGDVMSHQSPITGHQTNGPNQSNPP 240
           TQVASHAQKYFIRLNSMNRDRRRSSIHDITSVNNGGGDVMSHQSPITGHQTNGPNQSNPP
Sbjct: 181 TQVASHAQKYFIRLNSMNRDRRRSSIHDITSVNNGGGDVMSHQSPITGHQTNGPNQSNPP 240

Query: 241 ALGPPGKQGPQQHLPGIGMYGPPVGHPVAARPGHMASAVGTPVMLPHGIHPHPPYVMPLA 300
           ALGPPGKQGPQQHLPGIGMYGPPVGHPVAARPGHMASAVGTPVMLPHGIHPHPPYVMPLA
Sbjct: 241 ALGPPGKQGPQQHLPGIGMYGPPVGHPVAARPGHMASAVGTPVMLPHGIHPHPPYVMPLA 300

Query: 301 YPMAPPPLHQ 311
           YPMAPPPLHQ
Sbjct: 301 YPMAPPPLHQ 310

[Close]

BLAST of Carg17911-RA vs. NCBI nr
Match: KAG6589558.1 (Transcription factor MYBS1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 617.5 bits (1591), Expect = 6.4e-173
Identity = 308/310 (99.35%), Postives = 308/310 (99.35%), Query Frame = 0


Query: 1   MSTGSATTWTKEEDKAFENAIATHWAGELEGNKASEEMWENIASMVPTKNMEDLKQHYQM 60
           MSTGSATTWTKEEDKAFENAIATHWAGELEGN ASEEMWENIASMVPTKNMEDLKQHYQM
Sbjct: 1   MSTGSATTWTKEEDKAFENAIATHWAGELEGNMASEEMWENIASMVPTKNMEDLKQHYQM 60

Query: 61  LVEDVDAIESGQIPIPNYDSVSEEATKASTKAKDHRLHPHGATGSDSNKIPNSGFGSGFS 120
           LVEDVDAIESGQIPIPNYDSVSEEATKASTKAKDHRLHPHGATGSDSNKIPNSGFGSGFS
Sbjct: 61  LVEDVDAIESGQIPIPNYDSVSEEATKASTKAKDHRLHPHGATGSDSNKIPNSGFGSGFS 120

Query: 121 GLSHDSSAHATKGGSRSEQERKKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTP 180
           GLSHDSSAHATKGGSRSEQERKKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTP
Sbjct: 121 GLSHDSSAHATKGGSRSEQERKKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTP 180

Query: 181 TQVASHAQKYFIRLNSMNRDRRRSSIHDITSVNNGGGDVMSHQSPITGHQTNGPNQSNPP 240
           TQVASHAQKYFIRLNSMNRDRRRSSIHDITSVNNGGGDVMSHQSPITGHQTNGPNQSNPP
Sbjct: 181 TQVASHAQKYFIRLNSMNRDRRRSSIHDITSVNNGGGDVMSHQSPITGHQTNGPNQSNPP 240

Query: 241 ALGPPGKQGPQQHLPGIGMYGPPVGHPVAARPGHMASAVGTPVMLPHGIHPHPPYVMPLA 300
           ALGPPGKQGPQQHLPGIGMYG PVGHPVAARPGHMASAVGTPVMLPHGIHPHPPYVMPLA
Sbjct: 241 ALGPPGKQGPQQHLPGIGMYGAPVGHPVAARPGHMASAVGTPVMLPHGIHPHPPYVMPLA 300

Query: 301 YPMAPPPLHQ 311
           YPMAPPPLHQ
Sbjct: 301 YPMAPPPLHQ 310

[Close]

BLAST of Carg17911-RA vs. NCBI nr
Match: XP_023516640.1 (transcription factor MYBS1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 606.7 bits (1563), Expect = 1.1e-169
Identity = 303/310 (97.74%), Postives = 304/310 (98.06%), Query Frame = 0


Query: 1   MSTGSATTWTKEEDKAFENAIATHWAGELEGNKASEEMWENIASMVPTKNMEDLKQHYQM 60
           MSTGSATTWTKEEDKAFENAIATHWAGELEGNKASEEMWENIASMVPTKNMEDLKQHYQM
Sbjct: 1   MSTGSATTWTKEEDKAFENAIATHWAGELEGNKASEEMWENIASMVPTKNMEDLKQHYQM 60

Query: 61  LVEDVDAIESGQIPIPNYDSVSEEATKASTKAKDHRLHPHGATGSDSNKIPNSGFGSGFS 120
           LVEDV AIESGQIPIPNYDSV+EEATKASTKAKDHRLHPHGATGSDSNKIPNSG GSGFS
Sbjct: 61  LVEDVGAIESGQIPIPNYDSVAEEATKASTKAKDHRLHPHGATGSDSNKIPNSGLGSGFS 120

Query: 121 GLSHDSSAHATKGGSRSEQERKKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTP 180
           GLSHDSSAHATKGGSRSEQERKKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTP
Sbjct: 121 GLSHDSSAHATKGGSRSEQERKKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTP 180

Query: 181 TQVASHAQKYFIRLNSMNRDRRRSSIHDITSVNNGGGDVMSHQSPITGHQTNGPNQSNPP 240
           TQVASHAQKYFIRLNSMNRDRRRSSIHDITSVNN GGDVMSHQSPITGHQTN PNQSNPP
Sbjct: 181 TQVASHAQKYFIRLNSMNRDRRRSSIHDITSVNNAGGDVMSHQSPITGHQTNDPNQSNPP 240

Query: 241 ALGPPGKQGPQQHLPGIGMYGPPVGHPVAARPGHMASAVGTPVMLPHGIHPHPPYVMPLA 300
           ALGPPGK GPQQHLPGIGMYG PVGHPVAARPGHMASAVGTPVMLPHGIHPHPPYVMPLA
Sbjct: 241 ALGPPGKHGPQQHLPGIGMYGAPVGHPVAARPGHMASAVGTPVMLPHGIHPHPPYVMPLA 300

Query: 301 YPMAPPPLHQ 311
           YPMAPPPLHQ
Sbjct: 301 YPMAPPPLHQ 310

[Close]

BLAST of Carg17911-RA vs. NCBI nr
Match: XP_022987311.1 (transcription factor MYBS1-like [Cucurbita maxima])

HSP 1 Score: 600.5 bits (1547), Expect = 8.1e-168
Identity = 301/310 (97.10%), Postives = 302/310 (97.42%), Query Frame = 0


Query: 1   MSTGSATTWTKEEDKAFENAIATHWAGELEGNKASEEMWENIASMVPTKNMEDLKQHYQM 60
           MSTGSATTWTKEEDKAFENAIAT WAGELEGNK SEEMWENIASMVPTKNMEDLKQHYQM
Sbjct: 1   MSTGSATTWTKEEDKAFENAIATRWAGELEGNKTSEEMWENIASMVPTKNMEDLKQHYQM 60

Query: 61  LVEDVDAIESGQIPIPNYDSVSEEATKASTKAKDHRLHPHGATGSDSNKIPNSGFGSGFS 120
           LVEDV AIESGQIPIPNYDSV+EEATKASTKAKDH LHPHGATGSDSNKIPNSGFGSGFS
Sbjct: 61  LVEDVGAIESGQIPIPNYDSVAEEATKASTKAKDHYLHPHGATGSDSNKIPNSGFGSGFS 120

Query: 121 GLSHDSSAHATKGGSRSEQERKKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTP 180
            LSHDSSA ATKGGSRSEQERKKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTP
Sbjct: 121 RLSHDSSAQATKGGSRSEQERKKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTP 180

Query: 181 TQVASHAQKYFIRLNSMNRDRRRSSIHDITSVNNGGGDVMSHQSPITGHQTNGPNQSNPP 240
           TQVASHAQKYFIRLNSMNRDRRRSSIHDITSVNNGGGDVMSHQSPITGHQTNGPNQSNPP
Sbjct: 181 TQVASHAQKYFIRLNSMNRDRRRSSIHDITSVNNGGGDVMSHQSPITGHQTNGPNQSNPP 240

Query: 241 ALGPPGKQGPQQHLPGIGMYGPPVGHPVAARPGHMASAVGTPVMLPHGIHPHPPYVMPLA 300
           ALGPPGK GPQQHLPGIGMYG PVGHPVAARPGHMASAVGTPVMLPHGIHPHPPYVMPLA
Sbjct: 241 ALGPPGKHGPQQHLPGIGMYGAPVGHPVAARPGHMASAVGTPVMLPHGIHPHPPYVMPLA 300

Query: 301 YPMAPPPLHQ 311
           YPMAPPPLHQ
Sbjct: 301 YPMAPPPLHQ 310

[Close]

BLAST of Carg17911-RA vs. NCBI nr
Match: XP_023007241.1 (transcription factor MYBS1-like [Cucurbita maxima])

HSP 1 Score: 547.7 bits (1410), Expect = 6.3e-152
Identity = 278/311 (89.39%), Postives = 289/311 (92.93%), Query Frame = 0


Query: 1   MSTGSATTWTKEEDKAFENAIATHW-AGELEGNKASEEMWENIASMVPTKNMEDLKQHYQ 60
           MSTGSA  WTKEEDKAFENAIATHW A ELEG K SEEMWE IASM+PTKNMEDLKQHYQ
Sbjct: 1   MSTGSA-AWTKEEDKAFENAIATHWDAPELEG-KESEEMWEKIASMLPTKNMEDLKQHYQ 60

Query: 61  MLVEDVDAIESGQIPIPNYDSVSEEATKASTKAKDHRLHPHGATGSDSNKIPNSGFGSGF 120
           MLVEDV AIE+GQ+PIPNY SV EE T ASTK KD  LHPHGATGSD+NK PNSGFGSGF
Sbjct: 61  MLVEDVGAIEAGQVPIPNYASVGEETTNASTKDKDRHLHPHGATGSDTNKRPNSGFGSGF 120

Query: 121 SGLSHDSSAHATKGGSRSEQERKKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRT 180
           SGLSHDSS+HATKGGSRSEQER+KGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRT
Sbjct: 121 SGLSHDSSSHATKGGSRSEQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRT 180

Query: 181 PTQVASHAQKYFIRLNSMNRDRRRSSIHDITSVNNGGGDVMSHQSPITGHQTNGPNQSNP 240
           PTQVASHAQKYFIRLNSMNRDRRRSSIHDITSVNNGGGDVM+HQ+PITGHQTNG NQ+NP
Sbjct: 181 PTQVASHAQKYFIRLNSMNRDRRRSSIHDITSVNNGGGDVMAHQAPITGHQTNGMNQNNP 240

Query: 241 PALGPPGKQGPQQHLPGIGMYGPPVGHPVAARPGHMASAVGTPVMLPHGIHPHPPYVMPL 300
           PALGPPGK  PQQHLPGIGMYG PVGHPVA  PGHMASAVGTPVMLPHGIHPHPPYVMP+
Sbjct: 241 PALGPPGKHRPQQHLPGIGMYGAPVGHPVATPPGHMASAVGTPVMLPHGIHPHPPYVMPV 300

Query: 301 AYPMAPPPLHQ 311
           AYPMAPPP+HQ
Sbjct: 301 AYPMAPPPMHQ 309

[Close]

BLAST of Carg17911-RA vs. ExPASy Swiss-Prot
Match: B8A9B2 (Transcription factor MYBS1 OS=Oryza sativa subsp. indica OX=39946 GN=MYBS1 PE=3 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 1.1e-66
Identity = 164/320 (51.25%), Postives = 201/320 (62.81%), Query Frame = 0


Query: 2   STGSATTWTKEEDKAFENAIATHWA-GELEGNKASEEMWENIASMVP-TKNMEDLKQHYQ 61
           +  +A  WT+E+DKAFENA+A   A    +G    ++ +  +A+ VP  ++ E++++HY+
Sbjct: 11  TAAAAAAWTREDDKAFENALAACAAPPPADGGAPDDDWFAALAASVPGARSAEEVRRHYE 70

Query: 62  MLVEDVDAIESGQIPIPNYDSVSEEATKASTKAKDHRLHPHGATGSDSNKIPNSGFGSGF 121
            LVEDV AI++G++P+P Y +  E A               G    D  K    G G G+
Sbjct: 71  ALVEDVAAIDAGRVPLPRY-AGEESAAPPDGAGAAAAASKDGGHRRDERK----GGGGGY 130

Query: 122 SGLSHDSSAHATKGGSRSEQERKKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRT 181
            G          K  S++EQER+KGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRT
Sbjct: 131 DG---------GKSCSKAEQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRT 190

Query: 182 PTQVASHAQKYFIRLNSMNRDRRRSSIHDITSVNNGGGDVMSHQSPITGHQTNGPNQSNP 241
           PTQVASHAQKYFIRLNSMNRDRRRSSIHDITSV  G        +PITGHQ  G    NP
Sbjct: 191 PTQVASHAQKYFIRLNSMNRDRRRSSIHDITSVTAGDQVAAQQGAPITGHQATG----NP 250

Query: 242 --PALGPPGKQGPQQHLPG-----IGMY-GPPVGHPVAARPGHMA-SAVGTPVMLPHGIH 301
              ALGPPG +    H PG     + MY   P+GHPVA   GHM  +AVGTPV+ P G  
Sbjct: 251 AAAALGPPGMKHHHHHHPGGAPPPMPMYSAAPMGHPVA---GHMVPAAVGTPVVFPPG-- 306

Query: 302 PHPPYVMPLAYPMAPPPLHQ 311
            H PYV+P+ YP  P  +HQ
Sbjct: 311 -HAPYVVPVGYPAPPAKMHQ 306

[Close]

BLAST of Carg17911-RA vs. ExPASy Swiss-Prot
Match: Q8LH59 (Transcription factor MYBS1 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBS1 PE=1 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 1.1e-66
Identity = 164/320 (51.25%), Postives = 201/320 (62.81%), Query Frame = 0


Query: 2   STGSATTWTKEEDKAFENAIATHWA-GELEGNKASEEMWENIASMVP-TKNMEDLKQHYQ 61
           +  +A  WT+E+DKAFENA+A   A    +G    ++ +  +A+ VP  ++ E++++HY+
Sbjct: 11  TAAAAAAWTREDDKAFENALAACAAPPPADGGAPDDDWFAALAASVPGARSAEEVRRHYE 70

Query: 62  MLVEDVDAIESGQIPIPNYDSVSEEATKASTKAKDHRLHPHGATGSDSNKIPNSGFGSGF 121
            LVEDV AI++G++P+P Y +  E A               G    D  K    G G G+
Sbjct: 71  ALVEDVAAIDAGRVPLPRY-AGEESAAPPDGAGAAAAASKDGGHRRDERK----GGGGGY 130

Query: 122 SGLSHDSSAHATKGGSRSEQERKKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRT 181
            G          K  S++EQER+KGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRT
Sbjct: 131 DG---------GKSCSKAEQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRT 190

Query: 182 PTQVASHAQKYFIRLNSMNRDRRRSSIHDITSVNNGGGDVMSHQSPITGHQTNGPNQSNP 241
           PTQVASHAQKYFIRLNSMNRDRRRSSIHDITSV  G        +PITGHQ  G    NP
Sbjct: 191 PTQVASHAQKYFIRLNSMNRDRRRSSIHDITSVTAGDQVAAQQGAPITGHQATG----NP 250

Query: 242 --PALGPPGKQGPQQHLPG-----IGMY-GPPVGHPVAARPGHMA-SAVGTPVMLPHGIH 301
              ALGPPG +    H PG     + MY   P+GHPVA   GHM  +AVGTPV+ P G  
Sbjct: 251 AAAALGPPGMKHHHHHHPGGAPPPMPMYSAAPMGHPVA---GHMVPAAVGTPVVFPPG-- 306

Query: 302 PHPPYVMPLAYPMAPPPLHQ 311
            H PYV+P+ YP  P  +HQ
Sbjct: 311 -HAPYVVPVGYPAPPAKMHQ 306

[Close]

BLAST of Carg17911-RA vs. ExPASy Swiss-Prot
Match: Q9FNN6 (Transcription factor SRM1 OS=Arabidopsis thaliana OX=3702 GN=SRM1 PE=1 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 4.2e-58
Identity = 151/310 (48.71%), Postives = 188/310 (60.65%), Query Frame = 0


Query: 7   TTWTKEEDKAFENAIATHWAGELEGNKASEEMWENIASMVPTKNMEDLKQHYQMLVEDVD 66
           + W++E+D AFE A+A +          SEE WE IA+ VP K++E +K+HY++LVEDV 
Sbjct: 10  SVWSREDDIAFERALANN-------TDESEERWEKIAADVPGKSVEQIKEHYELLVEDVT 69

Query: 67  AIESGQIPIPNYDSVSEEATKASTKAKDHRLHPHGATGSDSNKIPNSGFGSGFSGLSHDS 126
            IESG +P+P Y S                  P G+ G   ++    G  S   G SH  
Sbjct: 70  RIESGCVPLPAYGS------------------PEGSNGHAGDE----GASSKKGGNSHAG 129

Query: 127 SAHATKGGSRSEQERKKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASH 186
            ++   G S+S+QER+KGI WTE+EHRLFLLGLDK+GKGDWRSISRNFV++RTPTQVASH
Sbjct: 130 ESNQA-GKSKSDQERRKGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASH 189

Query: 187 AQKYFIRLNSMNRDRRRSSIHDITSVNNGGGDVMSHQSPITG-----HQTNGPNQSNPPA 246
           AQKYFIRLNSMN+DRRRSSIHDITSV  G  DV + Q PITG     +  N  N ++ PA
Sbjct: 190 AQKYFIRLNSMNKDRRRSSIHDITSV--GNADVSTPQGPITGQNNSNNNNNNNNNNSSPA 249

Query: 247 LGPPG----KQGPQQHLPGIGMYG-PPVGHPVAARPGHMASAVGTPVMLP------HGIH 299
           +   G    KQ   Q  PG  MYG P +G P          AVGTPV LP      +G+H
Sbjct: 250 VAGGGNKSAKQAVSQAPPGPPMYGTPAIGQP----------AVGTPVNLPAPPHMAYGVH 277

[Close]

BLAST of Carg17911-RA vs. ExPASy Swiss-Prot
Match: Q8S9H7 (Transcription factor DIVARICATA OS=Antirrhinum majus OX=4151 GN=DIVARICATA PE=2 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 6.5e-43
Identity = 107/250 (42.80%), Postives = 142/250 (56.80%), Query Frame = 0


Query: 5   SATTWTKEEDKAFENAIATHWAGELEGNKASEEMWENIASMVPTKNMEDLKQHYQMLVED 64
           S T WT  E+KAFENA+A         ++ +   WE +A  VP K + D+ + Y+ L +D
Sbjct: 22  STTRWTAAENKAFENALAVF-------DENTPNRWERVAERVPGKTVGDVMRQYKELEDD 81

Query: 65  VDAIESGQIPIPNYDSVSEEATKASTKAKDHRLHPHGATGSDSNKIPNSGFGSGFSGL-- 124
           V +IE+G +P+P Y + S    +                          G G GF G   
Sbjct: 82  VSSIEAGFVPVPGYSTSSPFTLE-------------------------WGSGHGFDGFKQ 141

Query: 125 SHDSSAHATKGGSRSEQERKKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQ 184
           S+ +    +  G  SEQERKKG+PWTEEEH+LFL+GL K+GKGDWR+ISRNFVI+RTPTQ
Sbjct: 142 SYGTGGRKSSSGRPSEQERKKGVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQ 201

Query: 185 VASHAQKYFIRLNSMNRDRRRSSIHDITSVNNGGGDVMSHQSPITGHQTNGPNQSNPPAL 244
           VASHAQKYFIR  S  +D+RR+SIHDIT+VN            ++ +QT  P+   PP+ 
Sbjct: 202 VASHAQKYFIRQLSGGKDKRRASIHDITTVN------------LSDNQTPSPDNKKPPS- 226

Query: 245 GPPGKQGPQQ 253
            P      QQ
Sbjct: 262 SPDHSMAQQQ 226

[Close]

BLAST of Carg17911-RA vs. ExPASy Swiss-Prot
Match: Q2V9B0 (Transcription factor MYB1R1 OS=Solanum tuberosum OX=4113 PE=2 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 3.2e-26
Identity = 65/131 (49.62%), Postives = 86/131 (65.65%), Query Frame = 0


Query: 81  VSEEATKASTKAKDHRLHPHGATGSDSNKIPNSGFGSGFSGLSHDSSAHATKGGSRSEQE 140
           V  +  + S    D   + H    +++N   N+          + S+  A +  S S +E
Sbjct: 31  VKVDPMRKSVSLNDLSQYEHPNANNNNNGGDNNESSKVAQDEGYASADDAVQHQSNSGRE 90

Query: 141 RKKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFIRLNSMNRD 200
           RK+G+PWTEEEH+LFLLGL K GKGDWR ISRNFV +RTPTQVASHAQKYF+R +++NR 
Sbjct: 91  RKRGVPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRSNLNRR 150

Query: 201 RRRSSIHDITS 212
           RRRSS+ DIT+
Sbjct: 151 RRRSSLFDITT 161

[Close]

BLAST of Carg17911-RA vs. ExPASy TrEMBL
Match: A0A6J1JDT7 (transcription factor MYBS1-like OS=Cucurbita maxima OX=3661 GN=LOC111484899 PE=4 SV=1)

HSP 1 Score: 600.5 bits (1547), Expect = 3.9e-168
Identity = 301/310 (97.10%), Postives = 302/310 (97.42%), Query Frame = 0


Query: 1   MSTGSATTWTKEEDKAFENAIATHWAGELEGNKASEEMWENIASMVPTKNMEDLKQHYQM 60
           MSTGSATTWTKEEDKAFENAIAT WAGELEGNK SEEMWENIASMVPTKNMEDLKQHYQM
Sbjct: 1   MSTGSATTWTKEEDKAFENAIATRWAGELEGNKTSEEMWENIASMVPTKNMEDLKQHYQM 60

Query: 61  LVEDVDAIESGQIPIPNYDSVSEEATKASTKAKDHRLHPHGATGSDSNKIPNSGFGSGFS 120
           LVEDV AIESGQIPIPNYDSV+EEATKASTKAKDH LHPHGATGSDSNKIPNSGFGSGFS
Sbjct: 61  LVEDVGAIESGQIPIPNYDSVAEEATKASTKAKDHYLHPHGATGSDSNKIPNSGFGSGFS 120

Query: 121 GLSHDSSAHATKGGSRSEQERKKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTP 180
            LSHDSSA ATKGGSRSEQERKKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTP
Sbjct: 121 RLSHDSSAQATKGGSRSEQERKKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTP 180

Query: 181 TQVASHAQKYFIRLNSMNRDRRRSSIHDITSVNNGGGDVMSHQSPITGHQTNGPNQSNPP 240
           TQVASHAQKYFIRLNSMNRDRRRSSIHDITSVNNGGGDVMSHQSPITGHQTNGPNQSNPP
Sbjct: 181 TQVASHAQKYFIRLNSMNRDRRRSSIHDITSVNNGGGDVMSHQSPITGHQTNGPNQSNPP 240

Query: 241 ALGPPGKQGPQQHLPGIGMYGPPVGHPVAARPGHMASAVGTPVMLPHGIHPHPPYVMPLA 300
           ALGPPGK GPQQHLPGIGMYG PVGHPVAARPGHMASAVGTPVMLPHGIHPHPPYVMPLA
Sbjct: 241 ALGPPGKHGPQQHLPGIGMYGAPVGHPVAARPGHMASAVGTPVMLPHGIHPHPPYVMPLA 300

Query: 301 YPMAPPPLHQ 311
           YPMAPPPLHQ
Sbjct: 301 YPMAPPPLHQ 310

[Close]

BLAST of Carg17911-RA vs. ExPASy TrEMBL
Match: A0A6J1L002 (transcription factor MYBS1-like OS=Cucurbita maxima OX=3661 GN=LOC111499782 PE=4 SV=1)

HSP 1 Score: 547.7 bits (1410), Expect = 3.0e-152
Identity = 278/311 (89.39%), Postives = 289/311 (92.93%), Query Frame = 0


Query: 1   MSTGSATTWTKEEDKAFENAIATHW-AGELEGNKASEEMWENIASMVPTKNMEDLKQHYQ 60
           MSTGSA  WTKEEDKAFENAIATHW A ELEG K SEEMWE IASM+PTKNMEDLKQHYQ
Sbjct: 1   MSTGSA-AWTKEEDKAFENAIATHWDAPELEG-KESEEMWEKIASMLPTKNMEDLKQHYQ 60

Query: 61  MLVEDVDAIESGQIPIPNYDSVSEEATKASTKAKDHRLHPHGATGSDSNKIPNSGFGSGF 120
           MLVEDV AIE+GQ+PIPNY SV EE T ASTK KD  LHPHGATGSD+NK PNSGFGSGF
Sbjct: 61  MLVEDVGAIEAGQVPIPNYASVGEETTNASTKDKDRHLHPHGATGSDTNKRPNSGFGSGF 120

Query: 121 SGLSHDSSAHATKGGSRSEQERKKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRT 180
           SGLSHDSS+HATKGGSRSEQER+KGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRT
Sbjct: 121 SGLSHDSSSHATKGGSRSEQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRT 180

Query: 181 PTQVASHAQKYFIRLNSMNRDRRRSSIHDITSVNNGGGDVMSHQSPITGHQTNGPNQSNP 240
           PTQVASHAQKYFIRLNSMNRDRRRSSIHDITSVNNGGGDVM+HQ+PITGHQTNG NQ+NP
Sbjct: 181 PTQVASHAQKYFIRLNSMNRDRRRSSIHDITSVNNGGGDVMAHQAPITGHQTNGMNQNNP 240

Query: 241 PALGPPGKQGPQQHLPGIGMYGPPVGHPVAARPGHMASAVGTPVMLPHGIHPHPPYVMPL 300
           PALGPPGK  PQQHLPGIGMYG PVGHPVA  PGHMASAVGTPVMLPHGIHPHPPYVMP+
Sbjct: 241 PALGPPGKHRPQQHLPGIGMYGAPVGHPVATPPGHMASAVGTPVMLPHGIHPHPPYVMPV 300

Query: 301 AYPMAPPPLHQ 311
           AYPMAPPP+HQ
Sbjct: 301 AYPMAPPPMHQ 309

[Close]

BLAST of Carg17911-RA vs. ExPASy TrEMBL
Match: A0A6J1F4U3 (transcription factor MYBS1-like OS=Cucurbita moschata OX=3662 GN=LOC111440871 PE=4 SV=1)

HSP 1 Score: 546.2 bits (1406), Expect = 8.8e-152
Identity = 277/311 (89.07%), Postives = 288/311 (92.60%), Query Frame = 0


Query: 1   MSTGSATTWTKEEDKAFENAIATHW-AGELEGNKASEEMWENIASMVPTKNMEDLKQHYQ 60
           MSTGSA  WTKEEDKAFENAIATHW A ELEG K SEEMWE IASM+PTKNMEDLKQHYQ
Sbjct: 1   MSTGSA-AWTKEEDKAFENAIATHWDAPELEG-KESEEMWEKIASMLPTKNMEDLKQHYQ 60

Query: 61  MLVEDVDAIESGQIPIPNYDSVSEEATKASTKAKDHRLHPHGATGSDSNKIPNSGFGSGF 120
           MLVEDV AIE+GQ+PIPNY SV EE T ASTK KD  LHPHG TGSD+NK PNSGFGSGF
Sbjct: 61  MLVEDVGAIEAGQVPIPNYASVGEETTNASTKDKDRHLHPHGTTGSDTNKRPNSGFGSGF 120

Query: 121 SGLSHDSSAHATKGGSRSEQERKKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRT 180
           SGLSHDSS+HATKGGSRSEQER+KGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRT
Sbjct: 121 SGLSHDSSSHATKGGSRSEQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRT 180

Query: 181 PTQVASHAQKYFIRLNSMNRDRRRSSIHDITSVNNGGGDVMSHQSPITGHQTNGPNQSNP 240
           PTQVASHAQKYFIRLNSMNRDRRRSSIHDITSVNNGGGDVM+HQ+PITGHQTNG NQ+NP
Sbjct: 181 PTQVASHAQKYFIRLNSMNRDRRRSSIHDITSVNNGGGDVMAHQAPITGHQTNGMNQNNP 240

Query: 241 PALGPPGKQGPQQHLPGIGMYGPPVGHPVAARPGHMASAVGTPVMLPHGIHPHPPYVMPL 300
           PALGPPGK  PQQHLPGIGMYG PVGHPVA  PGHMASAVGTPVMLPHGIHPHPPYVMP+
Sbjct: 241 PALGPPGKHRPQQHLPGIGMYGAPVGHPVATPPGHMASAVGTPVMLPHGIHPHPPYVMPV 300

Query: 301 AYPMAPPPLHQ 311
           AYPMAPPP+HQ
Sbjct: 301 AYPMAPPPMHQ 309

[Close]

BLAST of Carg17911-RA vs. ExPASy TrEMBL
Match: A0A0A0LS09 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G021940 PE=4 SV=1)

HSP 1 Score: 533.5 bits (1373), Expect = 5.9e-148
Identity = 276/311 (88.75%), Postives = 285/311 (91.64%), Query Frame = 0


Query: 1   MSTGSATTWTKEEDKAFENAIATHWAGELEGNKASEEMWENIASMVPTKNMEDLKQHYQM 60
           MSTGSA  WTKEEDKAFENAIATHW  ELEG+K SEEMWE IASMVP+KNMEDLKQHYQM
Sbjct: 1   MSTGSA-VWTKEEDKAFENAIATHWGEELEGSKGSEEMWEKIASMVPSKNMEDLKQHYQM 60

Query: 61  LVEDVDAIESGQIPIPNYDSVSEEATKASTKAKDHRLHPHGATGSDSNKIPNSGFGSGFS 120
           LV+DV AIE+GQIPIPNY S   E T ASTK KDH LHPHG+  SDSNK PNSGFGSGFS
Sbjct: 61  LVDDVGAIEAGQIPIPNYASSVGEET-ASTKEKDHHLHPHGS--SDSNKRPNSGFGSGFS 120

Query: 121 GLSHDSSAHATKGGSRSEQERKKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTP 180
           GLSHDSSAHATKGGSRSEQER+KGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTP
Sbjct: 121 GLSHDSSAHATKGGSRSEQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTP 180

Query: 181 TQVASHAQKYFIRLNSMNRDRRRSSIHDITSVNN-GGGDVMSHQSPITGHQTNGPNQSNP 240
           TQVASHAQKYFIRLNSMNRDRRRSSIHDITSVNN GGGDVMSHQ+PITGHQTNG NQSNP
Sbjct: 181 TQVASHAQKYFIRLNSMNRDRRRSSIHDITSVNNGGGGDVMSHQAPITGHQTNGTNQSNP 240

Query: 241 PALGPPGKQGPQQHLPGIGMYGPPVGHPVAARPGHMASAVGTPVMLPHGIHPHPPYVMPL 300
           PALGPPGK  PQQHLPGIGMYG PVG PVAA PGHMASAVGTPVMLP GIHPHPPYVMP+
Sbjct: 241 PALGPPGKHRPQQHLPGIGMYGAPVGQPVAAPPGHMASAVGTPVMLPQGIHPHPPYVMPV 300

Query: 301 AYPMAPPPLHQ 311
           AYPMAPPP+HQ
Sbjct: 301 AYPMAPPPMHQ 307

[Close]

BLAST of Carg17911-RA vs. ExPASy TrEMBL
Match: A0A5D3DXY9 (Transcription factor DIVARICATA OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00300 PE=4 SV=1)

HSP 1 Score: 533.1 bits (1372), Expect = 7.7e-148
Identity = 276/311 (88.75%), Postives = 285/311 (91.64%), Query Frame = 0


Query: 1   MSTGSATTWTKEEDKAFENAIATHWAGELEGNKASEEMWENIASMVPTKNMEDLKQHYQM 60
           MSTGSA  WTKEEDKAFENAIATHW  ELEG+K SEEMWE IASMVP+KNMEDLKQHYQM
Sbjct: 1   MSTGSA-VWTKEEDKAFENAIATHWGEELEGSKGSEEMWEKIASMVPSKNMEDLKQHYQM 60

Query: 61  LVEDVDAIESGQIPIPNYDSVSEEATKASTKAKDHRLHPHGATGSDSNKIPNSGFGSGFS 120
           LV+DV AIE+GQIPIPNY S   E T ASTK KDH LHPHGA  SDSNK PNSGFGSGFS
Sbjct: 61  LVDDVGAIEAGQIPIPNYASSVGEET-ASTKEKDHHLHPHGA--SDSNKRPNSGFGSGFS 120

Query: 121 GLSHDSSAHATKGGSRSEQERKKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTP 180
           GLSHDSSAHATKGGSRSEQER+KGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTP
Sbjct: 121 GLSHDSSAHATKGGSRSEQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTP 180

Query: 181 TQVASHAQKYFIRLNSMNRDRRRSSIHDITSVNN-GGGDVMSHQSPITGHQTNGPNQSNP 240
           TQVASHAQKYFIRLNSMNRDRRRSSIHDITSVNN GGGDVMSHQ+PITGHQTNG NQSNP
Sbjct: 181 TQVASHAQKYFIRLNSMNRDRRRSSIHDITSVNNGGGGDVMSHQAPITGHQTNGTNQSNP 240

Query: 241 PALGPPGKQGPQQHLPGIGMYGPPVGHPVAARPGHMASAVGTPVMLPHGIHPHPPYVMPL 300
           PALGPPGK  PQQHLPGIGMYG PVG PVAA PGH+ASAVGTPVMLP GIHPHPPYVMP+
Sbjct: 241 PALGPPGKHRPQQHLPGIGMYGAPVGQPVAAPPGHIASAVGTPVMLPQGIHPHPPYVMPV 300

Query: 301 AYPMAPPPLHQ 311
           AYPMAPPP+HQ
Sbjct: 301 AYPMAPPPMHQ 307

[Close]

BLAST of Carg17911-RA vs. TAIR 10
Match: AT1G49010.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 282.7 bits (722), Expect = 3.5e-76
Identity = 180/325 (55.38%), Postives = 212/325 (65.23%), Query Frame = 0


Query: 8   TWTKEEDKAFENAIATHWAGELEGNKASEEMWENIASMVPTKNMEDLKQHYQMLVEDVDA 67
           TW++EE+KAFENAIA H   E    + +E+ W  ++SMVP+K +E++K+HYQ+L+EDV A
Sbjct: 7   TWSREEEKAFENAIALHCVEE----EITEDQWNKMSSMVPSKALEEVKKHYQILLEDVKA 66

Query: 68  IESGQIPIPNYDS----VSEEATKASTKAKDHRLHPHGATGSDSNKIPNSGFGSGFSGLS 127
           IE+GQ+P+P Y      + +EA  A+T   +   H  G+    S K PN     G SG+S
Sbjct: 67  IENGQVPLPRYHHRKGLIVDEAAAAATSPANRDSHSSGS----SEKKPN----PGTSGIS 126

Query: 128 HDSSAHATKGGSRSEQERKKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQV 187
             SS     GGSR+EQER+KGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQV
Sbjct: 127 --SSNGGRSGGSRAEQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQV 186

Query: 188 ASHAQKYFIRLNSMNRDRRRSSIHDITSVNN------GGGDVMSHQSPITGHQTNGPNQS 247
           ASHAQKYFIRLNSMNRDRRRSSIHDIT+VNN      GGG     Q  +  H+   P   
Sbjct: 187 ASHAQKYFIRLNSMNRDRRRSSIHDITTVNNQAPAVTGGG----QQPQVVKHRPAQPQ-- 246

Query: 248 NPPALGPPGKQGPQQHLP----GIGMY-GPPVGHPVAARPGHMASAVGTPVMLP------ 307
                 P  +  PQQH P    G+GMY G PVG P+ A P HM SAVGTPVMLP      
Sbjct: 247 ------PQPQPQPQQHHPPTMAGLGMYGGAPVGQPIIAPPDHMGSAVGTPVMLPPPMGTH 305

Query: 308 HGIHPHPPYVMPLAYPMAP-PPLHQ 311
           H  H H   V P A P  P PPL Q
Sbjct: 307 HHHHHHHLGVAPYAVPAYPVPPLPQ 305

[Close]

BLAST of Carg17911-RA vs. TAIR 10
Match: AT5G08520.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 226.5 bits (576), Expect = 3.0e-59
Identity = 151/310 (48.71%), Postives = 188/310 (60.65%), Query Frame = 0


Query: 7   TTWTKEEDKAFENAIATHWAGELEGNKASEEMWENIASMVPTKNMEDLKQHYQMLVEDVD 66
           + W++E+D AFE A+A +          SEE WE IA+ VP K++E +K+HY++LVEDV 
Sbjct: 10  SVWSREDDIAFERALANN-------TDESEERWEKIAADVPGKSVEQIKEHYELLVEDVT 69

Query: 67  AIESGQIPIPNYDSVSEEATKASTKAKDHRLHPHGATGSDSNKIPNSGFGSGFSGLSHDS 126
            IESG +P+P Y S                  P G+ G   ++    G  S   G SH  
Sbjct: 70  RIESGCVPLPAYGS------------------PEGSNGHAGDE----GASSKKGGNSHAG 129

Query: 127 SAHATKGGSRSEQERKKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASH 186
            ++   G S+S+QER+KGI WTE+EHRLFLLGLDK+GKGDWRSISRNFV++RTPTQVASH
Sbjct: 130 ESNQA-GKSKSDQERRKGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASH 189

Query: 187 AQKYFIRLNSMNRDRRRSSIHDITSVNNGGGDVMSHQSPITG-----HQTNGPNQSNPPA 246
           AQKYFIRLNSMN+DRRRSSIHDITSV  G  DV + Q PITG     +  N  N ++ PA
Sbjct: 190 AQKYFIRLNSMNKDRRRSSIHDITSV--GNADVSTPQGPITGQNNSNNNNNNNNNNSSPA 249

Query: 247 LGPPG----KQGPQQHLPGIGMYG-PPVGHPVAARPGHMASAVGTPVMLP------HGIH 299
           +   G    KQ   Q  PG  MYG P +G P          AVGTPV LP      +G+H
Sbjct: 250 VAGGGNKSAKQAVSQAPPGPPMYGTPAIGQP----------AVGTPVNLPAPPHMAYGVH 277

[Close]

BLAST of Carg17911-RA vs. TAIR 10
Match: AT2G38090.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 169.5 bits (428), Expect = 4.3e-42
Identity = 102/210 (48.57%), Postives = 131/210 (62.38%), Query Frame = 0


Query: 7   TTWTKEEDKAFENAIATHWAGELEGNKASEEMWENIASMVPTKNMEDLKQHYQMLVEDVD 66
           T WT EE+K FENA+A +       +K + + W  +A+M+P K + D+ + Y+ L EDV 
Sbjct: 27  TKWTAEENKKFENALAFY-------DKDTPDRWSRVAAMLPGKTVGDVIKQYRELEEDVS 86

Query: 67  AIESGQIPIPNYDSVSEEATKASTKAKDHRLHPHGATGSDSNKIPNSGFGSGFSGLSHDS 126
            IE+G IPIP Y S S              L   G  G+  N        +GF+   +  
Sbjct: 87  DIEAGLIPIPGYASDS------------FTLDWGGYDGASGN--------NGFNMNGYYF 146

Query: 127 SAHATKGGS---RSEQERKKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQV 186
           SA   K GS    +E ERKKG+PWTEEEHR FL+GL K+GKGDWR+I+RNFV +RTPTQV
Sbjct: 147 SAAGGKRGSAARTAEHERKKGVPWTEEEHRQFLMGLKKYGKGDWRNIARNFVTTRTPTQV 206

Query: 187 ASHAQKYFIRLNSMNRDRRRSSIHDITSVN 214
           ASHAQKYFIR  +  +D+RRSSIHDIT+VN
Sbjct: 207 ASHAQKYFIRQVNGGKDKRRSSIHDITTVN 209

[Close]

BLAST of Carg17911-RA vs. TAIR 10
Match: AT5G58900.1 (Homeodomain-like transcriptional regulator )

HSP 1 Score: 169.1 bits (427), Expect = 5.6e-42
Identity = 95/214 (44.39%), Postives = 130/214 (60.75%), Query Frame = 0


Query: 2   STGSATTWTKEEDKAFENAIATHWAGELEGNKASEEMWENIASMVPTKNMEDLKQHYQML 61
           ++G   TWT  E+KAFENA+A +       +  + + W+ +A+++P K + D+ + Y  L
Sbjct: 27  ASGEGATWTAAENKAFENALAVY-------DDNTPDRWQKVAAVIPGKTVSDVIRQYNDL 86

Query: 62  VEDVDAIESGQIPIPNYDSVSEEATKASTKAKDHRLHPHGATGSDSNKIPNSGFGSGFSG 121
             DV +IE+G IP+P Y +                        S    +  +G G G +G
Sbjct: 87  EADVSSIEAGLIPVPGYIT------------------------SPPFTLDWAGGGGGCNG 146

Query: 122 L--SHDSSAHATKGGSRSEQERKKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRT 181
               H      ++ G   E ERKKG+PWTEEEH+LFL+GL K+GKGDWR+ISRNFVI+RT
Sbjct: 147 FKPGHQVCNKRSQAGRSPELERKKGVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRT 206

Query: 182 PTQVASHAQKYFIRLNSMNRDRRRSSIHDITSVN 214
           PTQVASHAQKYFIR  S  +D+RR+SIHDIT+VN
Sbjct: 207 PTQVASHAQKYFIRQLSGGKDKRRASIHDITTVN 209

[Close]

BLAST of Carg17911-RA vs. TAIR 10
Match: AT3G11280.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 162.9 bits (411), Expect = 4.0e-40
Identity = 95/213 (44.60%), Postives = 124/213 (58.22%), Query Frame = 0


Query: 1   MSTGSATTWTKEEDKAFENAIATHWAGELEGNKASEEMWENIASMVPTKNMEDLKQHYQM 60
           + + S+ +WTKEE+K FE A+A +        + S + W  +ASM+P K + D+ + Y  
Sbjct: 25  LHSSSSGSWTKEENKMFERALAIY-------AEDSPDRWFKVASMIPGKTVFDVMKQYSK 84

Query: 61  LVEDVDAIESGQIPIPNYDSVSEEATKASTKAKDHRLHPHGATGSDSNKIPNSGFGSGFS 120
           L EDV  IE+G++PIP Y + S      +      R  P GA GSD              
Sbjct: 85  LEEDVFDIEAGRVPIPGYPAASSPLGFDTDMC---RKRPSGARGSD-------------- 144

Query: 121 GLSHDSSAHATKGGSRSEQERKKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTP 180
                             Q+RKKG+PWTEEEHR FLLGL K+GKGDWR+ISRNFV+S+TP
Sbjct: 145 ------------------QDRKKGVPWTEEEHRRFLLGLLKYGKGDWRNISRNFVVSKTP 195

Query: 181 TQVASHAQKYFIRLNSMNRDRRRSSIHDITSVN 214
           TQVASHAQKY+ R  S  +D+RR SIHDIT+ N
Sbjct: 205 TQVASHAQKYYQRQLSGAKDKRRPSIHDITTGN 195

The following BLAST results are available for this feature:

BLAST of Carg17911-RA vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7023245.1	1.5e-174	100.00	Transcription factor MYBS1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6589558.1	6.4e-173	99.35	Transcription factor MYBS1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023516640.1	1.1e-169	97.74	transcription factor MYBS1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022987311.1	8.1e-168	97.10	transcription factor MYBS1-like [Cucurbita maxima]	[more]
XP_023007241.1	6.3e-152	89.39	transcription factor MYBS1-like [Cucurbita maxima]	[more]

BLAST of Carg17911-RA vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B8A9B2	1.1e-66	51.25	Transcription factor MYBS1 OS=Oryza sativa subsp. indica OX=39946 GN=MYBS1 PE=3 ...	[more]
Q8LH59	1.1e-66	51.25	Transcription factor MYBS1 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBS1 PE=...	[more]
Q9FNN6	4.2e-58	48.71	Transcription factor SRM1 OS=Arabidopsis thaliana OX=3702 GN=SRM1 PE=1 SV=1	[more]
Q8S9H7	6.5e-43	42.80	Transcription factor DIVARICATA OS=Antirrhinum majus OX=4151 GN=DIVARICATA PE=2 ...	[more]
Q2V9B0	3.2e-26	49.62	Transcription factor MYB1R1 OS=Solanum tuberosum OX=4113 PE=2 SV=1	[more]

BLAST of Carg17911-RA vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JDT7	3.9e-168	97.10	transcription factor MYBS1-like OS=Cucurbita maxima OX=3661 GN=LOC111484899 PE=4...	[more]
A0A6J1L002	3.0e-152	89.39	transcription factor MYBS1-like OS=Cucurbita maxima OX=3661 GN=LOC111499782 PE=4...	[more]
A0A6J1F4U3	8.8e-152	89.07	transcription factor MYBS1-like OS=Cucurbita moschata OX=3662 GN=LOC111440871 PE...	[more]
A0A0A0LS09	5.9e-148	88.75	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G021940 PE=4 SV=1	[more]
A0A5D3DXY9	7.7e-148	88.75	Transcription factor DIVARICATA OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]

BLAST of Carg17911-RA vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G49010.1	3.5e-76	55.38	Duplicated homeodomain-like superfamily protein	[more]
AT5G08520.1	3.0e-59	48.71	Duplicated homeodomain-like superfamily protein	[more]
AT2G38090.1	4.3e-42	48.57	Duplicated homeodomain-like superfamily protein	[more]
AT5G58900.1	5.6e-42	44.39	Homeodomain-like transcriptional regulator	[more]
AT3G11280.1	4.0e-40	44.60	Duplicated homeodomain-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 143..193 e-value: 2.3E-10 score: 50.4 coord: 5..64 e-value: 1.4E-6 score: 37.9
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 9..62 score: 6.632088
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 139..191 score: 7.491405
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 146..191 e-value: 5.10877E-10 score: 52.1926
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 8..62 e-value: 4.62079E-9 score: 49.4962
IPR006447	Myb domain, plants	TIGRFAM	TIGR01557	TIGR01557	coord: 142..193 e-value: 1.5E-17 score: 61.6
None	No IPR available	GENE3D	1.10.10.60		coord: 2..75 e-value: 1.4E-18 score: 68.4
None	No IPR available	GENE3D	1.10.10.60		coord: 145..197 e-value: 5.4E-15 score: 57.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 86..102
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 208..237
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 105..133
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 202..273
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 76..146
None	No IPR available	PANTHER	PTHR44191	TRANSCRIPTION FACTOR KUA1	coord: 6..308
None	No IPR available	PANTHER	PTHR44191:SF2	TRANSCRIPTION FACTOR MYBS1	coord: 6..308
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 8..61 e-value: 2.4E-7 score: 30.9 coord: 146..190 e-value: 1.5E-10 score: 41.1
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 139..195 score: 17.097073
IPR017884	SANT domain	PROSITE	PS51293	SANT	coord: 147..195 score: 11.682213
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 7..68
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 140..196

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg17911	Carg17911	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg17911-RA:2	Carg17911-RA:2	exon
Carg17911-RA:1	Carg17911-RA:1	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg17911-RA:three_prime_utr	Carg17911-RA:three_prime_utr	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg17911-RA:cds	Carg17911-RA:cds_2	CDS
Carg17911-RA:cds	Carg17911-RA:cds	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg17911-RA	Carg17911-RA-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0009739	response to gibberellin
biological_process	GO:0009751	response to salicylic acid
biological_process	GO:0009744	response to sucrose
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0042803	protein homodimerization activity