Carg15315-RA (mRNA) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg15315-RA
Type	mRNA
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	NAC domain-containing protein 10-like
Location	Carg_Chr03: 9240944 .. 9242677 (+)
Sequence length	495
RNA-Seq Expression	Carg15315-RA
Synteny	Carg15315-RA

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGTGGTTCGGTAATACAAACGACGCCGTCTCCGCTGTGGATGCTCATCTCTTTACAGCCGGAAACCACCAAGATGACCGATCACCGGTCGCATTTCCAGCCCTAGCTTGCCCAACCTGTGCACACCCTCTTCACTTCCAACTCCAACTCCAGGTTATAAATAATAATAAATATTTTTTAAATTTAATTAGTTCGACTCTATTTTATTGTTGAAGAATAATTAATTAAAAATATAATTATGAAATTACATGTAGTTGCGGAAATGTGTATTTTATTTATTTAAACATGATGAATTGAGTCATCTATTTTTGTACGAAGAATTGTCATGATATAATTAATTAATTAATTTAGGGCGGATTGGAAGATTGGGGGAGGGCTCCGGCGGGAGTGAAGTTCGATCCAAGTGACCGACAAATTTTGGAACATTTAGAGGCGAAAGTGAAACGAGATAAGCGAAAGCTTCATCCTCTCATCGATGAATTCATTACTACATTAGAGGGAGATGATGGGATTTGTTACACCCACCCTCAAAATTTGCCTGGTACGCAAACATATCATGAGTCATTATGAGTACACAATCGATTGTACTTTTTATGTCTTCGATGTCATTAGCATAGTTACTAAACTCATTTGAATTTTTCATGCATCTACTAACTTTACTCATAACGTACATGATGTCTAGTCGGGTAGCTACTGATCCATCTTCATCTTTGCCCAATTTACTTCTTGGAACCATTGATTATGAATAGAATTTAAATGGCTTCATTCCAGAGATTAGCCACGTACTTATTCTAACACTAAAAAATATCTACCAACCTTATATGTTACTTACGAGACTAAAAAATATCTCTTATTGAGACTATATCTCAATGTGCTTATTTTAGTCCATATAAAGCACGAGCTCGTAGACTTTTCCTTCAGTTAGATGTCAAATTTGCCTTTTTGCTTGGAAAATTAACTGACATGGATTTGAAAAATGGGAGAAAGGAAAAGTCTAAGTTGAATAGTGTTTTGTATGGACTATACTTAGCCTAAGAGCCTACACATAATTGAATTTTGGAGTCATAGAGCGCAATATCTTTTCCACTACTTCGATATCAATTTTGTTTCATTAGCCTTCATCTTGTTCGTAATTACAAGTGTACATGAGAAATAGTTGTTGATAGTGACTCCTATCTTCACGTGGAGTATCTCAAATTCTTCCTCAATGTTTGTCATTGAGCTCGTTTAACCCAAGTTGAACTTTGATACTTCATCTTCATAGAGTCCCATAATCCTTGGCTGTGTCTTTCTTGATAATCGTTTTAAGAATGGAACGATCCAACGCCTAAACAAATAATTCTTTGTTTTCATGTCTTCGAACTTTTGATCATCAAGTTAACGTTGTTATGTTTGTATGTCGTTTTAAAACGTGCAATTGGGATTTCTATTTCTACCAAATTCTAATATTTTTTTTAATGCCTCTTAGAATAGAAAATAGTTGCAAATGTATTTAGTGATATATTTAATTTAAAATTTTAAGAAGGAAGAGGAAGATTAAACGTACATGAAATTCTAAAGCTTTGTGCTTGGAAAATTGCAGGAATGAGGAAAGACGGCCAAATCCGGCACTTTTTTCATCGCCCATCAAAAGCATATACGGCCGGCACAAGAAAACGCAGGAAAGTTAAAGAAGACGAAGAAGGCACCGACACAAGATGGCACAAAACCGGGAAGACAAGAAGATTTTAG

mRNA sequence

ATGATGTGGTTCGGTAATACAAACGACGCCGTCTCCGCTGTGGATGCTCATCTCTTTACAGCCGGAAACCACCAAGATGACCGATCACCGGTCGCATTTCCAGCCCTAGCTTGCCCAACCTGTGCACACCCTCTTCACTTCCAACTCCAACTCCAGGGCGGATTGGAAGATTGGGGGAGGGCTCCGGCGGGAGTGAAGTTCGATCCAAGTGACCGACAAATTTTGGAACATTTAGAGGCGAAAGTGAAACGAGATAAGCGAAAGCTTCATCCTCTCATCGATGAATTCATTACTACATTAGAGGGAGATGATGGGATTTGTTACACCCACCCTCAAAATTTGCCTGGAATGAGGAAAGACGGCCAAATCCGGCACTTTTTTCATCGCCCATCAAAAGCATATACGGCCGGCACAAGAAAACGCAGGAAAGTTAAAGAAGACGAAGAAGGCACCGACACAAGATGGCACAAAACCGGGAAGACAAGAAGATTTTAG

Coding sequence (CDS)

ATGATGTGGTTCGGTAATACAAACGACGCCGTCTCCGCTGTGGATGCTCATCTCTTTACAGCCGGAAACCACCAAGATGACCGATCACCGGTCGCATTTCCAGCCCTAGCTTGCCCAACCTGTGCACACCCTCTTCACTTCCAACTCCAACTCCAGGGCGGATTGGAAGATTGGGGGAGGGCTCCGGCGGGAGTGAAGTTCGATCCAAGTGACCGACAAATTTTGGAACATTTAGAGGCGAAAGTGAAACGAGATAAGCGAAAGCTTCATCCTCTCATCGATGAATTCATTACTACATTAGAGGGAGATGATGGGATTTGTTACACCCACCCTCAAAATTTGCCTGGAATGAGGAAAGACGGCCAAATCCGGCACTTTTTTCATCGCCCATCAAAAGCATATACGGCCGGCACAAGAAAACGCAGGAAAGTTAAAGAAGACGAAGAAGGCACCGACACAAGATGGCACAAAACCGGGAAGACAAGAAGATTTTAG

Protein sequence

MMWFGNTNDAVSAVDAHLFTAGNHQDDRSPVAFPALACPTCAHPLHFQLQLQGGLEDWGRAPAGVKFDPSDRQILEHLEAKVKRDKRKLHPLIDEFITTLEGDDGICYTHPQNLPGMRKDGQIRHFFHRPSKAYTAGTRKRRKVKEDEEGTDTRWHKTGKTRRF

Homology

[Close]

BLAST of Carg15315-RA vs. NCBI nr
Match: KAG7034615.1 (NAC domain-containing protein 10, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 352.1 bits (902), Expect = 2.7e-93
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 0


Query: 1   MMWFGNTNDAVSAVDAHLFTAGNHQDDRSPVAFPALACPTCAHPLHFQLQLQGGLEDWGR 60
           MMWFGNTNDAVSAVDAHLFTAGNHQDDRSPVAFPALACPTCAHPLHFQLQLQGGLEDWGR
Sbjct: 1   MMWFGNTNDAVSAVDAHLFTAGNHQDDRSPVAFPALACPTCAHPLHFQLQLQGGLEDWGR 60

Query: 61  APAGVKFDPSDRQILEHLEAKVKRDKRKLHPLIDEFITTLEGDDGICYTHPQNLPGMRKD 120
           APAGVKFDPSDRQILEHLEAKVKRDKRKLHPLIDEFITTLEGDDGICYTHPQNLPGMRKD
Sbjct: 61  APAGVKFDPSDRQILEHLEAKVKRDKRKLHPLIDEFITTLEGDDGICYTHPQNLPGMRKD 120

Query: 121 GQIRHFFHRPSKAYTAGTRKRRKVKEDEEGTDTRWHKTGKTRRF 165
           GQIRHFFHRPSKAYTAGTRKRRKVKEDEEGTDTRWHKTGKTRRF
Sbjct: 121 GQIRHFFHRPSKAYTAGTRKRRKVKEDEEGTDTRWHKTGKTRRF 164

[Close]

BLAST of Carg15315-RA vs. NCBI nr
Match: XP_022926098.1 (NAC domain-containing protein 10-like [Cucurbita moschata] >XP_022926100.1 NAC domain-containing protein 10-like [Cucurbita moschata])

HSP 1 Score: 347.8 bits (891), Expect = 5.0e-92
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MMWFGNTNDAVSAVDAHLFTAGNHQDDRSPVAFPALACPTCAHPLHFQLQLQGGLEDWGR 60
           MMWFGNTNDAVSAVDAHLFTAGNHQDDRSPVAFPALACPTCAHPLHFQLQLQGGLEDWGR
Sbjct: 1   MMWFGNTNDAVSAVDAHLFTAGNHQDDRSPVAFPALACPTCAHPLHFQLQLQGGLEDWGR 60

Query: 61  APAGVKFDPSDRQILEHLEAKVKRDKRKLHPLIDEFITTLEGDDGICYTHPQNLPGMRKD 120
           APAGVKFDPSDRQILEHLEAKVKRDKRKLHPLIDEFITTLEGDDGICYTHPQNLPGMRKD
Sbjct: 61  APAGVKFDPSDRQILEHLEAKVKRDKRKLHPLIDEFITTLEGDDGICYTHPQNLPGMRKD 120

Query: 121 GQIRHFFHRPSKAYTAGTRKRRKVKEDEEGTDTRWHKTGKTR 163
           GQIRHFFHRPSKAYTAGTRKRRKVKEDEEGTDTRWHKTGKTR
Sbjct: 121 GQIRHFFHRPSKAYTAGTRKRRKVKEDEEGTDTRWHKTGKTR 162

[Close]

BLAST of Carg15315-RA vs. NCBI nr
Match: KAG6604472.1 (NAC domain-containing protein 10, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 345.5 bits (885), Expect = 2.5e-91
Identity = 161/162 (99.38%), Postives = 161/162 (99.38%), Query Frame = 0


Query: 1   MMWFGNTNDAVSAVDAHLFTAGNHQDDRSPVAFPALACPTCAHPLHFQLQLQGGLEDWGR 60
           MMWF NTNDAVSAVDAHLFTAGNHQDDRSPVAFPALACPTCAHPLHFQLQLQGGLEDWGR
Sbjct: 1   MMWFSNTNDAVSAVDAHLFTAGNHQDDRSPVAFPALACPTCAHPLHFQLQLQGGLEDWGR 60

Query: 61  APAGVKFDPSDRQILEHLEAKVKRDKRKLHPLIDEFITTLEGDDGICYTHPQNLPGMRKD 120
           APAGVKFDPSDRQILEHLEAKVKRDKRKLHPLIDEFITTLEGDDGICYTHPQNLPGMRKD
Sbjct: 61  APAGVKFDPSDRQILEHLEAKVKRDKRKLHPLIDEFITTLEGDDGICYTHPQNLPGMRKD 120

Query: 121 GQIRHFFHRPSKAYTAGTRKRRKVKEDEEGTDTRWHKTGKTR 163
           GQIRHFFHRPSKAYTAGTRKRRKVKEDEEGTDTRWHKTGKTR
Sbjct: 121 GQIRHFFHRPSKAYTAGTRKRRKVKEDEEGTDTRWHKTGKTR 162

[Close]

BLAST of Carg15315-RA vs. NCBI nr
Match: KAG6581331.1 (NAC domain-containing protein 10, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 331.3 bits (848), Expect = 4.9e-87
Identity = 157/162 (96.91%), Postives = 157/162 (96.91%), Query Frame = 0


Query: 1   MMWFGNTNDAVSAVDAHLFTAGNHQDDRSPVAFPALACPTCAHPLHFQLQLQGGLEDWGR 60
           MMWF NTNDAVSAVDAHLFTAGNHQDDRSPVAFPALACPTCAHPLHFQLQLQGGLEDWGR
Sbjct: 1   MMWFSNTNDAVSAVDAHLFTAGNHQDDRSPVAFPALACPTCAHPLHFQLQLQGGLEDWGR 60

Query: 61  APAGVKFDPSDRQILEHLEAKVKRDKRKLHPLIDEFITTLEGDDGICYTHPQNLPGMRKD 120
           APAGVKFDPSDRQILEHLEAKVKRDKRKLHPLIDEFITTLEGDDGICYTHPQNLP    D
Sbjct: 61  APAGVKFDPSDRQILEHLEAKVKRDKRKLHPLIDEFITTLEGDDGICYTHPQNLP----D 120

Query: 121 GQIRHFFHRPSKAYTAGTRKRRKVKEDEEGTDTRWHKTGKTR 163
           GQIRHFFHRPSKAYTAGTRKRRKVKEDEEGTDTRWHKTGKTR
Sbjct: 121 GQIRHFFHRPSKAYTAGTRKRRKVKEDEEGTDTRWHKTGKTR 158

[Close]

BLAST of Carg15315-RA vs. NCBI nr
Match: XP_022978747.1 (NAC domain-containing protein 10-like [Cucurbita maxima])

HSP 1 Score: 303.9 bits (777), Expect = 8.3e-79
Identity = 146/162 (90.12%), Postives = 147/162 (90.74%), Query Frame = 0


Query: 1   MMWFGNTNDAVSAVDAHLFTAGNHQDDRSPVAFPALACPTCAHPLHFQLQLQGGLEDWGR 60
           MMWF NTNDAVSAVDAH  T GNHQDDRSPVAFPA     CAHPLH QLQLQGGLEDWGR
Sbjct: 1   MMWFSNTNDAVSAVDAHPLTDGNHQDDRSPVAFPA-----CAHPLHSQLQLQGGLEDWGR 60

Query: 61  APAGVKFDPSDRQILEHLEAKVKRDKRKLHPLIDEFITTLEGDDGICYTHPQNLPGMRKD 120
           AP GVKFDPSD+QILEHLEAKVKRDK KLHPLIDEFITTLE DDGICYTHPQNLPGMR D
Sbjct: 61  APTGVKFDPSDQQILEHLEAKVKRDKWKLHPLIDEFITTLEEDDGICYTHPQNLPGMRND 120

Query: 121 GQIRHFFHRPSKAYTAGTRKRRKVKEDEEGTDTRWHKTGKTR 163
           GQIRHFFHRPSKAYTAGTRKRRKVK DEEGTDTRWHKTGKTR
Sbjct: 121 GQIRHFFHRPSKAYTAGTRKRRKVKADEEGTDTRWHKTGKTR 157

[Close]

BLAST of Carg15315-RA vs. ExPASy Swiss-Prot
Match: F4HY61 (NAC domain-containing protein 10 OS=Arabidopsis thaliana OX=3702 GN=NAC010 PE=2 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 7.6e-51
Identity = 94/138 (68.12%), Postives = 106/138 (76.81%), Query Frame = 0


Query: 26  DDRSPVAFPALACPTCAHPLHFQLQLQ-GGLEDWGRAPAGVKFDPSDRQILEHLEAKVKR 85
           D +     P   CP+C H LH     Q G ++D    PAGVKFDPSD++IL HLEAKV  
Sbjct: 41  DSKISAETPITTCPSCGHKLHHHQDDQVGSIKDLPSLPAGVKFDPSDKEILMHLEAKVSS 100

Query: 86  DKRKLHPLIDEFITTLEGDDGICYTHPQNLPGMRKDGQIRHFFHRPSKAYTAGTRKRRKV 145
           DKRKLHPLIDEFI TLEG++GICYTHP+ LPG+ KDGQ+RHFFHRPSKAYT GTRKRRKV
Sbjct: 101 DKRKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKDGQVRHFFHRPSKAYTTGTRKRRKV 160

Query: 146 KEDEEGTDTRWHKTGKTR 163
             DEEG +TRWHKTGKTR
Sbjct: 161 STDEEGHETRWHKTGKTR 178

[Close]

BLAST of Carg15315-RA vs. ExPASy Swiss-Prot
Match: O49459 (NAC domain-containing protein 73 OS=Arabidopsis thaliana OX=3702 GN=NAC073 PE=2 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 3.7e-45
Identity = 92/167 (55.09%), Postives = 119/167 (71.26%), Query Frame = 0


Query: 1   MMWFGNTNDAVSAVDAHLFTAGNHQDDRSPVAFPALA----CPTCAHPLHFQLQLQGGLE 60
           M W  + +D V  V+  + + G  +   SPVA   ++    CP+C H  +F+   Q G+ 
Sbjct: 1   MTWCNDRSD-VQTVERIIPSPGAAE---SPVASLPVSCHKTCPSCGH--NFKFHEQAGIH 60

Query: 61  DWGRAPAGVKFDPSDRQILEHLEAKVKRDKRKLHPLIDEFITTLEGDDGICYTHPQNLPG 120
           D    PAGVKFDP+D+++LEHLE KV+ D +KLHPLIDEFI T++G++GICYTHP+ LPG
Sbjct: 61  DLPGLPAGVKFDPTDQEVLEHLEGKVRDDAKKLHPLIDEFIRTIDGENGICYTHPEKLPG 120

Query: 121 MRKDGQIRHFFHRPSKAYTAGTRKRRKVKEDEE-GTDTRWHKTGKTR 163
           + KDG +RHFFHRPSKAYT GTRKRRKV  D + G +TRWHKTGKTR
Sbjct: 121 VNKDGTVRHFFHRPSKAYTTGTRKRRKVHTDSDVGGETRWHKTGKTR 161

[Close]

BLAST of Carg15315-RA vs. ExPASy Swiss-Prot
Match: Q9M0F8 (NAC domain-containing protein 75 OS=Arabidopsis thaliana OX=3702 GN=NAC075 PE=2 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 3.6e-40
Identity = 78/133 (58.65%), Postives = 96/133 (72.18%), Query Frame = 0


Query: 38  CPTCAHPLHFQLQLQGGLEDWGRAPAGVKFDPSDRQILEHLEAKVKRDKRKLHPLIDEFI 97
           CP+C H      +L+G  +DW   PAGVKFDP+D++++EHLEAKV     K HPLIDEFI
Sbjct: 31  CPSCGH------KLEGKPQDWVGLPAGVKFDPTDQELIEHLEAKVLAKDFKSHPLIDEFI 90

Query: 98  TTLEGDDGICYTHPQNLPGMRKDGQIRHFFHRPSKAYTAGTRKRRKVKED--------EE 157
            T+EG+DGICYTHP+ LPG+ +DG  RHFFHRPSKAYT GTRKRRK++ +          
Sbjct: 91  PTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQTECDNNLQGSSS 150

Query: 158 GTDTRWHKTGKTR 163
             +TRWHKTGKTR
Sbjct: 151 SGETRWHKTGKTR 157

[Close]

BLAST of Carg15315-RA vs. ExPASy Swiss-Prot
Match: Q6NQK2 (SUPPRESSOR OF GAMMA RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=SOG1 PE=1 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 6.5e-34
Identity = 72/147 (48.98%), Postives = 93/147 (63.27%), Query Frame = 0


Query: 18  LFTAGNHQDDRSPV--AFPALACPTCAHPLHFQLQLQGGLEDWGRAPAGVKFDPSDRQIL 77
           + +A    D R  V  + P+  CP C H     +     ++DW   P GVKFDPSD +I+
Sbjct: 17  IMSASASSDPRQVVWKSNPSRHCPKCQH----VIDNSDVVDDWPGLPRGVKFDPSDPEII 76

Query: 78  EHLEAKVKRDKRKLHPLIDEFITTLEGDDGICYTHPQNLPGMRKDGQIRHFFHRPSKAYT 137
            HL AK        HP IDEFI T+  DDGICYTHP+NLPG++ DG + HFFH+  KAY+
Sbjct: 77  WHLLAKSGLSGLSSHPFIDEFIPTVNQDDGICYTHPKNLPGVKSDGTVSHFFHKAIKAYS 136

Query: 138 AGTRKRRKVKEDEEGTDTRWHKTGKTR 163
            GTRKRRK+ +D+ G D RWHKTG+T+
Sbjct: 137 TGTRKRRKIHDDDFG-DVRWHKTGRTK 158

[Close]

BLAST of Carg15315-RA vs. ExPASy TrEMBL
Match: A0A6J1EK21 (NAC domain-containing protein 10-like OS=Cucurbita moschata OX=3662 GN=LOC111433315 PE=4 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 2.4e-92
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MMWFGNTNDAVSAVDAHLFTAGNHQDDRSPVAFPALACPTCAHPLHFQLQLQGGLEDWGR 60
           MMWFGNTNDAVSAVDAHLFTAGNHQDDRSPVAFPALACPTCAHPLHFQLQLQGGLEDWGR
Sbjct: 1   MMWFGNTNDAVSAVDAHLFTAGNHQDDRSPVAFPALACPTCAHPLHFQLQLQGGLEDWGR 60

Query: 61  APAGVKFDPSDRQILEHLEAKVKRDKRKLHPLIDEFITTLEGDDGICYTHPQNLPGMRKD 120
           APAGVKFDPSDRQILEHLEAKVKRDKRKLHPLIDEFITTLEGDDGICYTHPQNLPGMRKD
Sbjct: 61  APAGVKFDPSDRQILEHLEAKVKRDKRKLHPLIDEFITTLEGDDGICYTHPQNLPGMRKD 120

Query: 121 GQIRHFFHRPSKAYTAGTRKRRKVKEDEEGTDTRWHKTGKTR 163
           GQIRHFFHRPSKAYTAGTRKRRKVKEDEEGTDTRWHKTGKTR
Sbjct: 121 GQIRHFFHRPSKAYTAGTRKRRKVKEDEEGTDTRWHKTGKTR 162

[Close]

BLAST of Carg15315-RA vs. ExPASy TrEMBL
Match: A0A6J1ILY3 (NAC domain-containing protein 10-like OS=Cucurbita maxima OX=3661 GN=LOC111478611 PE=4 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 4.0e-79
Identity = 146/162 (90.12%), Postives = 147/162 (90.74%), Query Frame = 0


Query: 1   MMWFGNTNDAVSAVDAHLFTAGNHQDDRSPVAFPALACPTCAHPLHFQLQLQGGLEDWGR 60
           MMWF NTNDAVSAVDAH  T GNHQDDRSPVAFPA     CAHPLH QLQLQGGLEDWGR
Sbjct: 1   MMWFSNTNDAVSAVDAHPLTDGNHQDDRSPVAFPA-----CAHPLHSQLQLQGGLEDWGR 60

Query: 61  APAGVKFDPSDRQILEHLEAKVKRDKRKLHPLIDEFITTLEGDDGICYTHPQNLPGMRKD 120
           AP GVKFDPSD+QILEHLEAKVKRDK KLHPLIDEFITTLE DDGICYTHPQNLPGMR D
Sbjct: 61  APTGVKFDPSDQQILEHLEAKVKRDKWKLHPLIDEFITTLEEDDGICYTHPQNLPGMRND 120

Query: 121 GQIRHFFHRPSKAYTAGTRKRRKVKEDEEGTDTRWHKTGKTR 163
           GQIRHFFHRPSKAYTAGTRKRRKVK DEEGTDTRWHKTGKTR
Sbjct: 121 GQIRHFFHRPSKAYTAGTRKRRKVKADEEGTDTRWHKTGKTR 157

[Close]

BLAST of Carg15315-RA vs. ExPASy TrEMBL
Match: A0A6J1KLI4 (NAC domain-containing protein 73-like OS=Cucurbita maxima OX=3661 GN=LOC111496820 PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 4.6e-59
Identity = 107/131 (81.68%), Postives = 120/131 (91.60%), Query Frame = 0


Query: 32  AFPALACPTCAHPLHFQLQLQGGLEDWGRAPAGVKFDPSDRQILEHLEAKVKRDKRKLHP 91
           AFP++ CP+CAHP+ F  Q QGG E WGR PAGVKFDPSD+QILEHL+AKVK DKRKLHP
Sbjct: 14  AFPSIICPSCAHPIRF--QRQGGFEGWGRLPAGVKFDPSDQQILEHLDAKVKHDKRKLHP 73

Query: 92  LIDEFITTLEGDDGICYTHPQNLPGMRKDGQIRHFFHRPSKAYTAGTRKRRKVKEDEEGT 151
           L+DEFI TL+G+DGICYTHPQNLPGMRKDG+IRHFFHRPSKAYTAG+RKRRKV+ D+EGT
Sbjct: 74  LLDEFILTLDGEDGICYTHPQNLPGMRKDGEIRHFFHRPSKAYTAGSRKRRKVQTDKEGT 133

Query: 152 DTRWHKTGKTR 163
           DTRWHKTGKTR
Sbjct: 134 DTRWHKTGKTR 142

[Close]

BLAST of Carg15315-RA vs. ExPASy TrEMBL
Match: A0A6J1EFS5 (NAC domain-containing protein 73-like OS=Cucurbita moschata OX=3662 GN=LOC111433912 PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 7.9e-59
Identity = 106/132 (80.30%), Postives = 122/132 (92.42%), Query Frame = 0


Query: 31  VAFPALACPTCAHPLHFQLQLQGGLEDWGRAPAGVKFDPSDRQILEHLEAKVKRDKRKLH 90
           VAFP++ CP+CAHP+ F  Q QGG E WGR PAGVKFDPSD+QILEHL+A+VKRDKRKLH
Sbjct: 13  VAFPSIICPSCAHPIRF--QRQGGFEGWGRLPAGVKFDPSDQQILEHLDAQVKRDKRKLH 72

Query: 91  PLIDEFITTLEGDDGICYTHPQNLPGMRKDGQIRHFFHRPSKAYTAGTRKRRKVKEDEEG 150
           PL+D+FI TL+G+DGICYTHPQNLPGMRKDG+IRHFFHRPSKAYTAG+RKRRKV+ D+EG
Sbjct: 73  PLLDQFIPTLDGEDGICYTHPQNLPGMRKDGEIRHFFHRPSKAYTAGSRKRRKVQTDKEG 132

Query: 151 TDTRWHKTGKTR 163
           T+TRWHKTGKTR
Sbjct: 133 TETRWHKTGKTR 142

[Close]

BLAST of Carg15315-RA vs. ExPASy TrEMBL
Match: A0A1S3AZ73 (NAC domain-containing protein 10 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484491 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 1.0e-50
Identity = 96/133 (72.18%), Postives = 113/133 (84.96%), Query Frame = 0


Query: 32  AFPALACPTCAHPLHFQLQLQGGLEDWGRAPAGVKFDPSDRQILEHLEAKVKRDKRKLHP 91
           A+ ++ CP+CA+PL      +  +EDWG+ PAG+KFDPSD+QILEHLEAKVK DK+KLHP
Sbjct: 3   AYGSIICPSCAYPLEIDEVNRSLVEDWGKLPAGIKFDPSDQQILEHLEAKVKEDKQKLHP 62

Query: 92  LIDEFITTLEGDDGICYTHPQNLPGMRKDGQIRHFFHRPSKAYTAGTRKRRKVK--EDEE 151
           LI  FI TL+GDDGICYTHPQ LPGMRKDG+IRH+FHR  KAYT+GTRKRRKVK  ++EE
Sbjct: 63  LIHHFILTLDGDDGICYTHPQYLPGMRKDGEIRHYFHRSPKAYTSGTRKRRKVKTADEEE 122

Query: 152 GTDTRWHKTGKTR 163
           GTDTRWHKTGKTR
Sbjct: 123 GTDTRWHKTGKTR 135

[Close]

BLAST of Carg15315-RA vs. TAIR 10
Match: AT1G28470.1 (NAC domain containing protein 10 )

HSP 1 Score: 201.4 bits (511), Expect = 5.4e-52
Identity = 94/138 (68.12%), Postives = 106/138 (76.81%), Query Frame = 0


Query: 26  DDRSPVAFPALACPTCAHPLHFQLQLQ-GGLEDWGRAPAGVKFDPSDRQILEHLEAKVKR 85
           D +     P   CP+C H LH     Q G ++D    PAGVKFDPSD++IL HLEAKV  
Sbjct: 41  DSKISAETPITTCPSCGHKLHHHQDDQVGSIKDLPSLPAGVKFDPSDKEILMHLEAKVSS 100

Query: 86  DKRKLHPLIDEFITTLEGDDGICYTHPQNLPGMRKDGQIRHFFHRPSKAYTAGTRKRRKV 145
           DKRKLHPLIDEFI TLEG++GICYTHP+ LPG+ KDGQ+RHFFHRPSKAYT GTRKRRKV
Sbjct: 101 DKRKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKDGQVRHFFHRPSKAYTTGTRKRRKV 160

Query: 146 KEDEEGTDTRWHKTGKTR 163
             DEEG +TRWHKTGKTR
Sbjct: 161 STDEEGHETRWHKTGKTR 178

[Close]

BLAST of Carg15315-RA vs. TAIR 10
Match: AT4G28500.1 (NAC domain containing protein 73 )

HSP 1 Score: 182.6 bits (462), Expect = 2.6e-46
Identity = 92/167 (55.09%), Postives = 119/167 (71.26%), Query Frame = 0


Query: 1   MMWFGNTNDAVSAVDAHLFTAGNHQDDRSPVAFPALA----CPTCAHPLHFQLQLQGGLE 60
           M W  + +D V  V+  + + G  +   SPVA   ++    CP+C H  +F+   Q G+ 
Sbjct: 1   MTWCNDRSD-VQTVERIIPSPGAAE---SPVASLPVSCHKTCPSCGH--NFKFHEQAGIH 60

Query: 61  DWGRAPAGVKFDPSDRQILEHLEAKVKRDKRKLHPLIDEFITTLEGDDGICYTHPQNLPG 120
           D    PAGVKFDP+D+++LEHLE KV+ D +KLHPLIDEFI T++G++GICYTHP+ LPG
Sbjct: 61  DLPGLPAGVKFDPTDQEVLEHLEGKVRDDAKKLHPLIDEFIRTIDGENGICYTHPEKLPG 120

Query: 121 MRKDGQIRHFFHRPSKAYTAGTRKRRKVKEDEE-GTDTRWHKTGKTR 163
           + KDG +RHFFHRPSKAYT GTRKRRKV  D + G +TRWHKTGKTR
Sbjct: 121 VNKDGTVRHFFHRPSKAYTTGTRKRRKVHTDSDVGGETRWHKTGKTR 161

[Close]

BLAST of Carg15315-RA vs. TAIR 10
Match: AT4G29230.1 (NAC domain containing protein 75 )

HSP 1 Score: 166.0 bits (419), Expect = 2.5e-41
Identity = 78/133 (58.65%), Postives = 96/133 (72.18%), Query Frame = 0


Query: 38  CPTCAHPLHFQLQLQGGLEDWGRAPAGVKFDPSDRQILEHLEAKVKRDKRKLHPLIDEFI 97
           CP+C H      +L+G  +DW   PAGVKFDP+D++++EHLEAKV     K HPLIDEFI
Sbjct: 31  CPSCGH------KLEGKPQDWVGLPAGVKFDPTDQELIEHLEAKVLAKDFKSHPLIDEFI 90

Query: 98  TTLEGDDGICYTHPQNLPGMRKDGQIRHFFHRPSKAYTAGTRKRRKVKED--------EE 157
            T+EG+DGICYTHP+ LPG+ +DG  RHFFHRPSKAYT GTRKRRK++ +          
Sbjct: 91  PTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQTECDNNLQGSSS 150

Query: 158 GTDTRWHKTGKTR 163
             +TRWHKTGKTR
Sbjct: 151 SGETRWHKTGKTR 157

[Close]

BLAST of Carg15315-RA vs. TAIR 10
Match: AT5G56620.1 (NAC domain containing protein 99 )

HSP 1 Score: 149.4 bits (376), Expect = 2.4e-36
Identity = 72/136 (52.94%), Postives = 96/136 (70.59%), Query Frame = 0


Query: 38  CPTCAHPLHFQLQLQGGLEDWGRAPAGVKFDPSDRQILEHLEAKVK-RDKRK----LHPL 97
           CP C   +    +      +W   PAGVKFDP+D++++EHLEAKVK +++ K     HPL
Sbjct: 25  CPGCGRMIQAATK-----PNWVGLPAGVKFDPTDQELIEHLEAKVKGKEENKKWSSSHPL 84

Query: 98  IDEFITTLEGDDGICYTHPQNLPGMRKDGQIRHFFHRPSKAYTAGTRKRRKVKEDEE--- 157
           IDEFI T++G+DGICYTHPQ LPG+ +DG  +HFFH+PS+AYT GTRKRRK+ + +    
Sbjct: 85  IDEFIPTIDGEDGICYTHPQKLPGVTRDGLSKHFFHKPSRAYTTGTRKRRKIIQTDHDSE 144

Query: 158 ---GTDTRWHKTGKTR 163
               ++TRWHKTGKTR
Sbjct: 145 LTGSSETRWHKTGKTR 155

[Close]

BLAST of Carg15315-RA vs. TAIR 10
Match: AT1G25580.1 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein )

HSP 1 Score: 145.2 bits (365), Expect = 4.6e-35
Identity = 72/147 (48.98%), Postives = 93/147 (63.27%), Query Frame = 0


Query: 18  LFTAGNHQDDRSPV--AFPALACPTCAHPLHFQLQLQGGLEDWGRAPAGVKFDPSDRQIL 77
           + +A    D R  V  + P+  CP C H     +     ++DW   P GVKFDPSD +I+
Sbjct: 17  IMSASASSDPRQVVWKSNPSRHCPKCQH----VIDNSDVVDDWPGLPRGVKFDPSDPEII 76

Query: 78  EHLEAKVKRDKRKLHPLIDEFITTLEGDDGICYTHPQNLPGMRKDGQIRHFFHRPSKAYT 137
            HL AK        HP IDEFI T+  DDGICYTHP+NLPG++ DG + HFFH+  KAY+
Sbjct: 77  WHLLAKSGLSGLSSHPFIDEFIPTVNQDDGICYTHPKNLPGVKSDGTVSHFFHKAIKAYS 136

Query: 138 AGTRKRRKVKEDEEGTDTRWHKTGKTR 163
            GTRKRRK+ +D+ G D RWHKTG+T+
Sbjct: 137 TGTRKRRKIHDDDFG-DVRWHKTGRTK 158

The following BLAST results are available for this feature:

BLAST of Carg15315-RA vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7034615.1	2.7e-93	100.00	NAC domain-containing protein 10, partial [Cucurbita argyrosperma subsp. argyros...	[more]
XP_022926098.1	5.0e-92	100.00	NAC domain-containing protein 10-like [Cucurbita moschata] >XP_022926100.1 NAC d...	[more]
KAG6604472.1	2.5e-91	99.38	NAC domain-containing protein 10, partial [Cucurbita argyrosperma subsp. sororia...	[more]
KAG6581331.1	4.9e-87	96.91	NAC domain-containing protein 10, partial [Cucurbita argyrosperma subsp. sororia...	[more]
XP_022978747.1	8.3e-79	90.12	NAC domain-containing protein 10-like [Cucurbita maxima]	[more]

BLAST of Carg15315-RA vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4HY61	7.6e-51	68.12	NAC domain-containing protein 10 OS=Arabidopsis thaliana OX=3702 GN=NAC010 PE=2 ...	[more]
O49459	3.7e-45	55.09	NAC domain-containing protein 73 OS=Arabidopsis thaliana OX=3702 GN=NAC073 PE=2 ...	[more]
Q9M0F8	3.6e-40	58.65	NAC domain-containing protein 75 OS=Arabidopsis thaliana OX=3702 GN=NAC075 PE=2 ...	[more]
Q6NQK2	6.5e-34	48.98	SUPPRESSOR OF GAMMA RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=SOG1 PE=1 SV=1	[more]

BLAST of Carg15315-RA vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EK21	2.4e-92	100.00	NAC domain-containing protein 10-like OS=Cucurbita moschata OX=3662 GN=LOC111433...	[more]
A0A6J1ILY3	4.0e-79	90.12	NAC domain-containing protein 10-like OS=Cucurbita maxima OX=3661 GN=LOC11147861...	[more]
A0A6J1KLI4	4.6e-59	81.68	NAC domain-containing protein 73-like OS=Cucurbita maxima OX=3661 GN=LOC11149682...	[more]
A0A6J1EFS5	7.9e-59	80.30	NAC domain-containing protein 73-like OS=Cucurbita moschata OX=3662 GN=LOC111433...	[more]
A0A1S3AZ73	1.0e-50	72.18	NAC domain-containing protein 10 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484...	[more]

BLAST of Carg15315-RA vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G28470.1	5.4e-52	68.12	NAC domain containing protein 10	[more]
AT4G28500.1	2.6e-46	55.09	NAC domain containing protein 73	[more]
AT4G29230.1	2.5e-41	58.65	NAC domain containing protein 75	[more]
AT5G56620.1	2.4e-36	52.94	NAC domain containing protein 99	[more]
AT1G25580.1	4.6e-35	48.98	NAC (No Apical Meristem) domain transcriptional regulator superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003441	NAC domain	PFAM	PF02365	NAM	coord: 62..162 e-value: 5.0E-12 score: 46.8
IPR003441	NAC domain	PROSITE	PS51005	NAC	coord: 61..164 score: 16.427647
IPR036093	NAC domain superfamily	GENE3D	2.170.150.80	NAC domain	coord: 70..164 e-value: 5.0E-10 score: 41.4
IPR036093	NAC domain superfamily	SUPERFAMILY	101941	NAC domain	coord: 57..162
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 140..157
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 132..164
None	No IPR available	PANTHER	PTHR31079:SF20	NAC DOMAIN-CONTAINING PROTEIN 10	coord: 22..163
IPR044799	NAC domain-containing protein SOG1-like	PANTHER	PTHR31079	NAC DOMAIN-CONTAINING PROTEIN 73	coord: 22..163

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg15315	Carg15315	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg15315-RA:1	Carg15315-RA:1	exon
Carg15315-RA:2	Carg15315-RA:2	exon
Carg15315-RA:3	Carg15315-RA:3	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg15315-RA:cds	Carg15315-RA:cds	CDS
Carg15315-RA:cds	Carg15315-RA:cds_2	CDS
Carg15315-RA:cds	Carg15315-RA:cds_3	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg15315-RA	Carg15315-RA-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0000976	transcription cis-regulatory region binding