Carg15305-RA (mRNA) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg15305-RA
Type	mRNA
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	ethylene-responsive transcription factor 4-like
Location	Carg_Chr03: 9195972 .. 9196721 (-)
Sequence length	750
RNA-Seq Expression	Carg15305-RA
Synteny	Carg15305-RA

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGCCCAGGGAAAAGGCGGTTGCCGTCAAGGCCAACGTCGGCAACGTGAAGGAAGTGCATTTTAGAGGAGTGAGGAAGCGGCCGTGGGGGAGATACGCCGCTGAGATCAGAGATCCCTGTAAGAAGAGCCGCGTTTGGCTTGGAACCTTCGATACGGCGGAGGAGGCGGCCCGAGCCTACGATAAAGCCGCTAGAGAGTTCCGTGGTGTCAAGGCCAAGACCAATTTCCCTTTGCCCTCCGACGATCTTCTTAACCTTAACAATAAGATAAACAACATCAACAATAACCAGAGCCCGAGTCAGAGTAGCACGGTTGAGTCCTCCAGCCGAGAGCAACCTCTAATGGTTGATTCCTCACCTTTGAATCTCAATCTCGCTCACGGCATGCCCGGACTCACAGCCGCCGGAGCCGTCACTTTCCCGTTCCAGCGGTACCAAATTCCCATGATCGGAGAAGTTTTTTCCCGCGGCATACCGCCGTCAAACCACGTTCTGTATTTCGATGCCGCCCTTCGTGCCGGAATGATCAAGACCCATCCTCATCCAAACCAACGGCTACGCTTCGACCATCATCACGAAGCCGTAAGTGATTTCCGCCGCGAGTACGCCGGCGGCGGTGTTCAAAGCGATTCGGACTCCTCCTCCGTCGTAGACATGAACGGGCAGGACCTCAAACCCCGAAGCGGCGGCGGCGGCGTTGGCGGCCTGGATTTGGATCTGAACTTTCCCCCACCAGAATCCGCCTGA

mRNA sequence

ATGGCGCCCAGGGAAAAGGCGGTTGCCGTCAAGGCCAACGTCGGCAACGTGAAGGAAGTGCATTTTAGAGGAGTGAGGAAGCGGCCGTGGGGGAGATACGCCGCTGAGATCAGAGATCCCTGTAAGAAGAGCCGCGTTTGGCTTGGAACCTTCGATACGGCGGAGGAGGCGGCCCGAGCCTACGATAAAGCCGCTAGAGAGTTCCGTGGTGTCAAGGCCAAGACCAATTTCCCTTTGCCCTCCGACGATCTTCTTAACCTTAACAATAAGATAAACAACATCAACAATAACCAGAGCCCGAGTCAGAGTAGCACGGTTGAGTCCTCCAGCCGAGAGCAACCTCTAATGGTTGATTCCTCACCTTTGAATCTCAATCTCGCTCACGGCATGCCCGGACTCACAGCCGCCGGAGCCGTCACTTTCCCGTTCCAGCGGTACCAAATTCCCATGATCGGAGAAGTTTTTTCCCGCGGCATACCGCCGTCAAACCACGTTCTGTATTTCGATGCCGCCCTTCGTGCCGGAATGATCAAGACCCATCCTCATCCAAACCAACGGCTACGCTTCGACCATCATCACGAAGCCGTAAGTGATTTCCGCCGCGAGTACGCCGGCGGCGGTGTTCAAAGCGATTCGGACTCCTCCTCCGTCGTAGACATGAACGGGCAGGACCTCAAACCCCGAAGCGGCGGCGGCGGCGTTGGCGGCCTGGATTTGGATCTGAACTTTCCCCCACCAGAATCCGCCTGA

Coding sequence (CDS)

ATGGCGCCCAGGGAAAAGGCGGTTGCCGTCAAGGCCAACGTCGGCAACGTGAAGGAAGTGCATTTTAGAGGAGTGAGGAAGCGGCCGTGGGGGAGATACGCCGCTGAGATCAGAGATCCCTGTAAGAAGAGCCGCGTTTGGCTTGGAACCTTCGATACGGCGGAGGAGGCGGCCCGAGCCTACGATAAAGCCGCTAGAGAGTTCCGTGGTGTCAAGGCCAAGACCAATTTCCCTTTGCCCTCCGACGATCTTCTTAACCTTAACAATAAGATAAACAACATCAACAATAACCAGAGCCCGAGTCAGAGTAGCACGGTTGAGTCCTCCAGCCGAGAGCAACCTCTAATGGTTGATTCCTCACCTTTGAATCTCAATCTCGCTCACGGCATGCCCGGACTCACAGCCGCCGGAGCCGTCACTTTCCCGTTCCAGCGGTACCAAATTCCCATGATCGGAGAAGTTTTTTCCCGCGGCATACCGCCGTCAAACCACGTTCTGTATTTCGATGCCGCCCTTCGTGCCGGAATGATCAAGACCCATCCTCATCCAAACCAACGGCTACGCTTCGACCATCATCACGAAGCCGTAAGTGATTTCCGCCGCGAGTACGCCGGCGGCGGTGTTCAAAGCGATTCGGACTCCTCCTCCGTCGTAGACATGAACGGGCAGGACCTCAAACCCCGAAGCGGCGGCGGCGGCGTTGGCGGCCTGGATTTGGATCTGAACTTTCCCCCACCAGAATCCGCCTGA

Protein sequence

MAPREKAVAVKANVGNVKEVHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARAYDKAAREFRGVKAKTNFPLPSDDLLNLNNKINNINNNQSPSQSSTVESSSREQPLMVDSSPLNLNLAHGMPGLTAAGAVTFPFQRYQIPMIGEVFSRGIPPSNHVLYFDAALRAGMIKTHPHPNQRLRFDHHHEAVSDFRREYAGGGVQSDSDSSSVVDMNGQDLKPRSGGGGVGGLDLDLNFPPPESA

Homology

[Close]

BLAST of Carg15305-RA vs. NCBI nr
Match: XP_022925660.1 (ethylene-responsive transcription factor 4-like [Cucurbita moschata] >KAG7034605.1 Ethylene-responsive transcription factor 4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 501.9 bits (1291), Expect = 3.2e-138
Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 0


Query: 1   MAPREKAVAVKANVGNVKEVHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA 60
           MAPREKAVAVKANVGNVKEVHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA
Sbjct: 1   MAPREKAVAVKANVGNVKEVHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA 60

Query: 61  YDKAAREFRGVKAKTNFPLPSDDLLNLNNKINNINNNQSPSQSSTVESSSREQPLMVDSS 120
           YDKAAREFRGVKAKTNFPLPSDDLLNLNNKINNINNNQSPSQSSTVESSSREQPLMVDSS
Sbjct: 61  YDKAAREFRGVKAKTNFPLPSDDLLNLNNKINNINNNQSPSQSSTVESSSREQPLMVDSS 120

Query: 121 PLNLNLAHGMPGLTAAGAVTFPFQRYQIPMIGEVFSRGIPPSNHVLYFDAALRAGMIKTH 180
           PLNLNLAHGMPGLTAAGAVTFPFQRYQIPMIGEVFSRGIPPSNHVLYFDAALRAGMIKTH
Sbjct: 121 PLNLNLAHGMPGLTAAGAVTFPFQRYQIPMIGEVFSRGIPPSNHVLYFDAALRAGMIKTH 180

Query: 181 PHPNQRLRFDHHHEAVSDFRREYAGGGVQSDSDSSSVVDMNGQDLKPRSGGGGVGGLDLD 240
           PHPNQRLRFDHHHEAVSDFRREYAGGGVQSDSDSSSVVDMNGQDLKPRSGGGGVGGLDLD
Sbjct: 181 PHPNQRLRFDHHHEAVSDFRREYAGGGVQSDSDSSSVVDMNGQDLKPRSGGGGVGGLDLD 240

Query: 241 LNFPPPESA 250
           LNFPPPESA
Sbjct: 241 LNFPPPESA 249

[Close]

BLAST of Carg15305-RA vs. NCBI nr
Match: XP_023545040.1 (ethylene-responsive transcription factor 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 495.4 bits (1274), Expect = 3.0e-136
Identity = 248/249 (99.60%), Postives = 248/249 (99.60%), Query Frame = 0


Query: 1   MAPREKAVAVKANVGNVKEVHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA 60
           MAPREKAVAVKANVGNVKEVHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA
Sbjct: 1   MAPREKAVAVKANVGNVKEVHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA 60

Query: 61  YDKAAREFRGVKAKTNFPLPSDDLLNLNNKINNINNNQSPSQSSTVESSSREQPLMVDSS 120
           YDKAAREFRGVKAKTNFPLPSDDLLNLNNKINNINNNQSPSQSSTVESSSREQPLMVDSS
Sbjct: 61  YDKAAREFRGVKAKTNFPLPSDDLLNLNNKINNINNNQSPSQSSTVESSSREQPLMVDSS 120

Query: 121 PLNLNLAHGMPGLTAAGAVTFPFQRYQIPMIGEVFSRGIPPSNHVLYFDAALRAGMIKTH 180
           PLNLNLAHGMPGLTAAGAVTFPFQRYQIPMIGEVFSRGIPPSNHVLYFDAALRAGMIKTH
Sbjct: 121 PLNLNLAHGMPGLTAAGAVTFPFQRYQIPMIGEVFSRGIPPSNHVLYFDAALRAGMIKTH 180

Query: 181 PHPNQRLRFDHHHEAVSDFRREYAGGGVQSDSDSSSVVDMNGQDLKPRSGGGGVGGLDLD 240
           PHPNQRLRFDHHHEAVSDFRREYAGGGVQSDSDSSSVVDMNGQDLKPRS GGGVGGLDLD
Sbjct: 181 PHPNQRLRFDHHHEAVSDFRREYAGGGVQSDSDSSSVVDMNGQDLKPRS-GGGVGGLDLD 240

Query: 241 LNFPPPESA 250
           LNFPPPESA
Sbjct: 241 LNFPPPESA 248

[Close]

BLAST of Carg15305-RA vs. NCBI nr
Match: KAG6604462.1 (Ethylene-responsive transcription factor 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 494.2 bits (1271), Expect = 6.6e-136
Identity = 247/249 (99.20%), Postives = 248/249 (99.60%), Query Frame = 0


Query: 1   MAPREKAVAVKANVGNVKEVHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA 60
           MAPREKAVAVKANVGNVKEVHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA
Sbjct: 1   MAPREKAVAVKANVGNVKEVHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA 60

Query: 61  YDKAAREFRGVKAKTNFPLPSDDLLNLNNKINNINNNQSPSQSSTVESSSREQPLMVDSS 120
           YDKAAREFRGVKAKTNFPLPSDDLLNLNNKINNINNNQSPSQSSTVESSSREQPLMVDSS
Sbjct: 61  YDKAAREFRGVKAKTNFPLPSDDLLNLNNKINNINNNQSPSQSSTVESSSREQPLMVDSS 120

Query: 121 PLNLNLAHGMPGLTAAGAVTFPFQRYQIPMIGEVFSRGIPPSNHVLYFDAALRAGMIKTH 180
           PLNLNL+HGMPGLTAAGAVTFPFQRYQIPMIGEVFSRGIPPSNHVLYFDAALRAGMIKTH
Sbjct: 121 PLNLNLSHGMPGLTAAGAVTFPFQRYQIPMIGEVFSRGIPPSNHVLYFDAALRAGMIKTH 180

Query: 181 PHPNQRLRFDHHHEAVSDFRREYAGGGVQSDSDSSSVVDMNGQDLKPRSGGGGVGGLDLD 240
           PHPNQRLRFDHHHEAVSDFRREYAGGGVQSDSDSSSVVDMNGQDLKPRS GGGVGGLDLD
Sbjct: 181 PHPNQRLRFDHHHEAVSDFRREYAGGGVQSDSDSSSVVDMNGQDLKPRS-GGGVGGLDLD 240

Query: 241 LNFPPPESA 250
           LNFPPPESA
Sbjct: 241 LNFPPPESA 248

[Close]

BLAST of Carg15305-RA vs. NCBI nr
Match: XP_022978752.1 (ethylene-responsive transcription factor 4-like [Cucurbita maxima])

HSP 1 Score: 471.9 bits (1213), Expect = 3.5e-129
Identity = 239/249 (95.98%), Postives = 242/249 (97.19%), Query Frame = 0


Query: 1   MAPREKAVAVKANVGNVKEVHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA 60
           MAPREKAVAVKANVGNVKEVHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA
Sbjct: 1   MAPREKAVAVKANVGNVKEVHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA 60

Query: 61  YDKAAREFRGVKAKTNFPLPSDDLLNLNNKINNINNNQSPSQSSTVESSSREQPLMVDSS 120
           YDKAAREFRGVKAKTNFP+PS DLLNLNNKI NI+NNQSPSQSSTVESSSREQPLMVDSS
Sbjct: 61  YDKAAREFRGVKAKTNFPMPSYDLLNLNNKI-NISNNQSPSQSSTVESSSREQPLMVDSS 120

Query: 121 PLNLNLAHGMPGLTAAGAVTFPFQRYQIPMIGEVFSRGIPPSNHVLYFDAALRAGMIKTH 180
           PLNLNL HGMPGLT+ GAVTFPFQRYQIPMIGEVFSRGIPPSNHVLYFDAALRAGMIKTH
Sbjct: 121 PLNLNLGHGMPGLTSTGAVTFPFQRYQIPMIGEVFSRGIPPSNHVLYFDAALRAGMIKTH 180

Query: 181 PHPNQRLRFDHHHEAVSDFRREYAGGGVQSDSDSSSVVDMNGQDLKPRSGGGGVGGLDLD 240
           PHPNQRLRFDHH EAVSDFRREYAGGGVQSDSDSSSVVDMNGQDLKPR GG GVGGLDLD
Sbjct: 181 PHPNQRLRFDHHPEAVSDFRREYAGGGVQSDSDSSSVVDMNGQDLKPR-GGVGVGGLDLD 240

Query: 241 LNFPPPESA 250
           LNFPPPESA
Sbjct: 241 LNFPPPESA 247

[Close]

BLAST of Carg15305-RA vs. NCBI nr
Match: XP_038883348.1 (ethylene-responsive transcription factor 4-like [Benincasa hispida])

HSP 1 Score: 434.1 bits (1115), Expect = 8.1e-118
Identity = 224/252 (88.89%), Postives = 233/252 (92.46%), Query Frame = 0


Query: 1   MAPREKAVAVKANVGNVKEVHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA 60
           MAPREKA+AVK NVGNVK+VHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA
Sbjct: 1   MAPREKAIAVKPNVGNVKDVHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA 60

Query: 61  YDKAAREFRGVKAKTNFPLPSDD-LLNLNNKINNINNNQSPSQSSTVESSSREQPLMVDS 120
           YD AAREFRGVKAKTNFPLPSDD LLNLN KINNINNNQSPSQSSTVESSSREQ LMVDS
Sbjct: 61  YDNAAREFRGVKAKTNFPLPSDDQLLNLNKKINNINNNQSPSQSSTVESSSREQALMVDS 120

Query: 121 SPLNLNLAHGMPGLTAAGAVTFPFQRYQIPMIGEVFSR-GIPPSNHVLYFDAALRAGMIK 180
           SPLNLNL HG+ GLT AG ++FPFQR+QIP+IGEVF+R GIPPSNHVLYFDAALRAGMIK
Sbjct: 121 SPLNLNLGHGIGGLTTAGPISFPFQRFQIPVIGEVFTRGGIPPSNHVLYFDAALRAGMIK 180

Query: 181 THP-HPNQRLRFDHHHEAVSDFRREYAGGGVQSDSDSSSVVDMNGQDLKPRSGGGGVGGL 240
           +HP HPNQRLRFDH  EAVSDFRRE A GGVQSDSDSSSVVDMNG DLKPR GGG  GGL
Sbjct: 181 SHPHHPNQRLRFDHLREAVSDFRRELASGGVQSDSDSSSVVDMNGPDLKPRGGGG--GGL 240

Query: 241 DLDLNFPPPESA 250
           DLDLNFPPPESA
Sbjct: 241 DLDLNFPPPESA 250

[Close]

BLAST of Carg15305-RA vs. ExPASy Swiss-Prot
Match: Q40477 (Ethylene-responsive transcription factor 4 OS=Nicotiana tabacum OX=4097 GN=ERF4 PE=1 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 2.1e-39
Identity = 114/239 (47.70%), Postives = 135/239 (56.49%), Query Frame = 0


Query: 17  VKEVHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARAYDKAAREFRGVKAKTN 76
           VKEVH+RGVRKRPWGRYAAEIRDP KKSRVWLGTFDTAEEAA+AYD AAREFRG KAKTN
Sbjct: 22  VKEVHYRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAKAYDTAAREFRGPKAKTN 81

Query: 77  FPLPSDDLLNLNNKINNINNNQSPSQSSTVESSSREQPLMV-DSSPLNLNLAHGMPGLTA 136
           FP P++              NQSPS SSTVESSS E  +     +PL L+L   +  + A
Sbjct: 82  FPSPTE--------------NQSPSHSSTVESSSGENGVHAPPHAPLELDLTRRLGSVAA 141

Query: 137 --------AGAVTFPFQRYQIPMIGEVFSRGIPPSNHVLYFDAALRAGMIKTHPHPNQRL 196
                   +G V +P   +Q P +       +P    VL FD+  RAG++   P P    
Sbjct: 142 DGGDNCRRSGEVGYPI-FHQQPTVAV-----LPNGQPVLLFDSLWRAGVV-NRPQP---- 201

Query: 197 RFDHHHEAVSDFRREYAGGGVQSDSDSSSVVDMNGQDLKPRSGGGGVGGLDLDLNFPPP 247
               +H     F    AG G  + SDSSS V+ N  D        G  G+DLDLN  PP
Sbjct: 202 ----YHVTPMGFNGVNAGVG-PTVSDSSSAVEENQYD--------GKRGIDLDLNLAPP 222

[Close]

BLAST of Carg15305-RA vs. ExPASy Swiss-Prot
Match: Q9LW49 (Ethylene-responsive transcription factor 4 OS=Nicotiana sylvestris OX=4096 GN=ERF4 PE=2 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 3.9e-38
Identity = 114/246 (46.34%), Postives = 136/246 (55.28%), Query Frame = 0


Query: 10  VKANVGNVKEVHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARAYDKAAREFR 69
           VK N   VKEVH+RGVRKRPWGRYAAEIRDP KKSRVWLGTFDTAEEAA+AYD AAREFR
Sbjct: 17  VKTN--GVKEVHYRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAKAYDTAAREFR 76

Query: 70  GVKAKTNFPLPSDDLLNLNNKINNINNNQSPSQSSTVESSSREQPLMV-DSSPLNLNLAH 129
           G KAKTNFPLPS+              NQS S SST+ESSS E  +     +PL L+L  
Sbjct: 77  GPKAKTNFPLPSE--------------NQSTSHSSTMESSSGETGIHAPPHAPLELDLTR 136

Query: 130 GMPGLTA--------AGAVTFPFQRYQIPMIGEVFSRGIPPSNHVLYFDAALRAGMIKTH 189
            +  + A        +G V +P   +Q P +       +P    VL FD+  R G++   
Sbjct: 137 RLGSVAADGGDNCRRSGEVGYPI-FHQQPTVAV-----LPNGQPVLLFDSLWRPGVV-NR 196

Query: 190 PHPNQRLRFDHHHEAVSDFRREYAGGGVQSDSDSSSVVDMNGQDLKPRSGGGGVGGLDLD 247
           P P   +        V+        G   + SDSSSVV+ N  D        G  G+DLD
Sbjct: 197 PQPYHVMPMAMGFNGVN-------AGVDPTVSDSSSVVEENQYD--------GKRGIDLD 224

[Close]

BLAST of Carg15305-RA vs. ExPASy Swiss-Prot
Match: O80340 (Ethylene-responsive transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=ERF4 PE=1 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 1.1e-32
Identity = 110/237 (46.41%), Postives = 130/237 (54.85%), Query Frame = 0


Query: 16  NVKEVHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARAYDKAAREFRGVKAKT 75
           N KE+ +RGVRKRPWGRYAAEIRDP KK+RVWLGTFDTAEEAARAYD AAR+FRG KAKT
Sbjct: 19  NAKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAARDFRGAKAKT 78

Query: 76  NFPLPSDDLLNLNNKINNINNNQSPSQSSTVESSSREQPLMVDSS-----PLNLNLAHGM 135
           NFP      L L+++       +SPSQSST++ +S    L+V S+     P  L L+ G 
Sbjct: 79  NFP----TFLELSDQKVPTGFARSPSQSSTLDCAS-PPTLVVPSATAGNVPPQLELSLGG 138

Query: 136 PGLTAAGAVTFPFQRYQIPMIGEVFSRGIPPSNHVLYFDAALRAGMIKTHPHP-NQRLRF 195
            G    G+       YQIPM           S  V + D      + +  P P     R 
Sbjct: 139 GG---GGSC------YQIPM-----------SRPVYFLDLMGIGNVGRGQPPPVTSAFRS 198

Query: 196 DHHHEAVSDFRREYAGGGVQSDSDSSSVVDMNGQDLKPRSGGGGVGGLDLDLNFPPP 247
              H A           G QSDSDSSSVVD  G  ++ RS       LDLDLN PPP
Sbjct: 199 PVVHVATK------MACGAQSDSDSSSVVDFEG-GMEKRS-----QLLDLDLNLPPP 218

[Close]

BLAST of Carg15305-RA vs. ExPASy Swiss-Prot
Match: Q9C5I3 (Ethylene-responsive transcription factor 11 OS=Arabidopsis thaliana OX=3702 GN=ERF11 PE=1 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 2.1e-28
Identity = 77/119 (64.71%), Postives = 81/119 (68.07%), Query Frame = 0


Query: 1   MAPREKAVAVKANVGNVKEVHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA 60
           MAP  K  AVK N GN   V +RGVRKRPWGRYAAEIRDP KKSRVWLGTFDT EEAARA
Sbjct: 1   MAPTVKTAAVKTNEGN--GVRYRGVRKRPWGRYAAEIRDPFKKSRVWLGTFDTPEEAARA 60

Query: 61  YDKAAREFRGVKAKTNFPLPSDDLLNLNNKINNINNNQSPSQSSTVESSSREQPLMVDS 120
           YDK A EFRG KAKTNFP         N   + ++  QS SQSSTVESS     L  DS
Sbjct: 61  YDKRAIEFRGAKAKTNFPC-------YNINAHCLSLTQSLSQSSTVESSFPNLNLGSDS 110

[Close]

BLAST of Carg15305-RA vs. ExPASy Swiss-Prot
Match: Q9FE67 (Ethylene-responsive transcription factor 9 OS=Arabidopsis thaliana OX=3702 GN=ERF9 PE=1 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 2.4e-27
Identity = 71/120 (59.17%), Postives = 83/120 (69.17%), Query Frame = 0


Query: 1   MAPRE---KAVAVKANVGNV--------KEVHFRGVRKRPWGRYAAEIRDPCKKSRVWLG 60
           MAPR+   +++AV    G          KEVHFRGVRKRPWGRYAAEIRDP KK+RVWLG
Sbjct: 1   MAPRQANGRSIAVSEGGGGKTMTMTTMRKEVHFRGVRKRPWGRYAAEIRDPGKKTRVWLG 60

Query: 61  TFDTAEEAARAYDKAAREFRGVKAKTNFPLPSDDLLNLNNKINNINNNQSPSQSSTVESS 110
           TFDTAEEAARAYD AAREFRG KAKTNFPLP +     +  +N+   N S    +TV ++
Sbjct: 61  TFDTAEEAARAYDTAAREFRGSKAKTNFPLPGE-----STTVNDGGENDSYVNRTTVTTA 115

[Close]

BLAST of Carg15305-RA vs. ExPASy TrEMBL
Match: A0A6J1EIT5 (ethylene-responsive transcription factor 4-like OS=Cucurbita moschata OX=3662 GN=LOC111433009 PE=4 SV=1)

HSP 1 Score: 501.9 bits (1291), Expect = 1.5e-138
Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 0


Query: 1   MAPREKAVAVKANVGNVKEVHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA 60
           MAPREKAVAVKANVGNVKEVHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA
Sbjct: 1   MAPREKAVAVKANVGNVKEVHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA 60

Query: 61  YDKAAREFRGVKAKTNFPLPSDDLLNLNNKINNINNNQSPSQSSTVESSSREQPLMVDSS 120
           YDKAAREFRGVKAKTNFPLPSDDLLNLNNKINNINNNQSPSQSSTVESSSREQPLMVDSS
Sbjct: 61  YDKAAREFRGVKAKTNFPLPSDDLLNLNNKINNINNNQSPSQSSTVESSSREQPLMVDSS 120

Query: 121 PLNLNLAHGMPGLTAAGAVTFPFQRYQIPMIGEVFSRGIPPSNHVLYFDAALRAGMIKTH 180
           PLNLNLAHGMPGLTAAGAVTFPFQRYQIPMIGEVFSRGIPPSNHVLYFDAALRAGMIKTH
Sbjct: 121 PLNLNLAHGMPGLTAAGAVTFPFQRYQIPMIGEVFSRGIPPSNHVLYFDAALRAGMIKTH 180

Query: 181 PHPNQRLRFDHHHEAVSDFRREYAGGGVQSDSDSSSVVDMNGQDLKPRSGGGGVGGLDLD 240
           PHPNQRLRFDHHHEAVSDFRREYAGGGVQSDSDSSSVVDMNGQDLKPRSGGGGVGGLDLD
Sbjct: 181 PHPNQRLRFDHHHEAVSDFRREYAGGGVQSDSDSSSVVDMNGQDLKPRSGGGGVGGLDLD 240

Query: 241 LNFPPPESA 250
           LNFPPPESA
Sbjct: 241 LNFPPPESA 249

[Close]

BLAST of Carg15305-RA vs. ExPASy TrEMBL
Match: A0A6J1ILY8 (ethylene-responsive transcription factor 4-like OS=Cucurbita maxima OX=3661 GN=LOC111478617 PE=4 SV=1)

HSP 1 Score: 471.9 bits (1213), Expect = 1.7e-129
Identity = 239/249 (95.98%), Postives = 242/249 (97.19%), Query Frame = 0


Query: 1   MAPREKAVAVKANVGNVKEVHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA 60
           MAPREKAVAVKANVGNVKEVHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA
Sbjct: 1   MAPREKAVAVKANVGNVKEVHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA 60

Query: 61  YDKAAREFRGVKAKTNFPLPSDDLLNLNNKINNINNNQSPSQSSTVESSSREQPLMVDSS 120
           YDKAAREFRGVKAKTNFP+PS DLLNLNNKI NI+NNQSPSQSSTVESSSREQPLMVDSS
Sbjct: 61  YDKAAREFRGVKAKTNFPMPSYDLLNLNNKI-NISNNQSPSQSSTVESSSREQPLMVDSS 120

Query: 121 PLNLNLAHGMPGLTAAGAVTFPFQRYQIPMIGEVFSRGIPPSNHVLYFDAALRAGMIKTH 180
           PLNLNL HGMPGLT+ GAVTFPFQRYQIPMIGEVFSRGIPPSNHVLYFDAALRAGMIKTH
Sbjct: 121 PLNLNLGHGMPGLTSTGAVTFPFQRYQIPMIGEVFSRGIPPSNHVLYFDAALRAGMIKTH 180

Query: 181 PHPNQRLRFDHHHEAVSDFRREYAGGGVQSDSDSSSVVDMNGQDLKPRSGGGGVGGLDLD 240
           PHPNQRLRFDHH EAVSDFRREYAGGGVQSDSDSSSVVDMNGQDLKPR GG GVGGLDLD
Sbjct: 181 PHPNQRLRFDHHPEAVSDFRREYAGGGVQSDSDSSSVVDMNGQDLKPR-GGVGVGGLDLD 240

Query: 241 LNFPPPESA 250
           LNFPPPESA
Sbjct: 241 LNFPPPESA 247

[Close]

BLAST of Carg15305-RA vs. ExPASy TrEMBL
Match: Q5S004 (Ethylene response factor 1 OS=Cucumis sativus OX=3659 GN=ERF1 PE=2 SV=1)

HSP 1 Score: 423.7 bits (1088), Expect = 5.3e-115
Identity = 220/250 (88.00%), Postives = 228/250 (91.20%), Query Frame = 0


Query: 1   MAPREKAVAVKANVGNVKEVHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA 60
           MAPREKAVAVK +VGNVKEVHFRGVRKRPWGRYAAEIRDP KKSRVWLGTFDTAEEAARA
Sbjct: 1   MAPREKAVAVKPSVGNVKEVHFRGVRKRPWGRYAAEIRDPSKKSRVWLGTFDTAEEAARA 60

Query: 61  YDKAAREFRGVKAKTNFPLPSDD-LLNLNNKINNINNNQSPSQSSTVESSSREQPLMVDS 120
           YD AAR+FRGVKAKTNFPLPSDD LLNLNNKINNINNNQSPSQSSTVESSSREQ LMVDS
Sbjct: 61  YDSAARDFRGVKAKTNFPLPSDDQLLNLNNKINNINNNQSPSQSSTVESSSREQALMVDS 120

Query: 121 SPLNLNLAHGMPGLTAAGAVTFPFQRYQIPMIGEVFSRGIPPSNHVLYFDAALRAGMIKT 180
           SPLNLNL HG+ GLT AG ++FPFQRYQIPMIGEVF+RGIPPSNHVLYFDAALRAGMI +
Sbjct: 121 SPLNLNLGHGIGGLTNAGPISFPFQRYQIPMIGEVFTRGIPPSNHVLYFDAALRAGMINS 180

Query: 181 HPHPNQRLRFDHHHEAVSDFRREYAGGGVQSDSDSSSVVDMNGQDLKPRSGGGGVGGLDL 240
             HPNQRL FD   EAVSDFRRE+AG GVQSDSDSSSVVDMNGQDLKPR G G  G LDL
Sbjct: 181 --HPNQRLHFDRIREAVSDFRREFAGSGVQSDSDSSSVVDMNGQDLKPRGGSG--GRLDL 240

Query: 241 DLNFPPPESA 250
           DLNFPPPESA
Sbjct: 241 DLNFPPPESA 246

[Close]

BLAST of Carg15305-RA vs. ExPASy TrEMBL
Match: A0A5A7UGN5 (Ethylene-responsive transcription factor 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007640 PE=4 SV=1)

HSP 1 Score: 422.9 bits (1086), Expect = 9.1e-115
Identity = 219/250 (87.60%), Postives = 227/250 (90.80%), Query Frame = 0


Query: 1   MAPREKAVAVKANVGNVKEVHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA 60
           MAPREKAVAVK NVGNVKEVHFRGVRKRPWGRYAAEIRDP KKSRVWLGTFDTAEEAARA
Sbjct: 1   MAPREKAVAVKPNVGNVKEVHFRGVRKRPWGRYAAEIRDPSKKSRVWLGTFDTAEEAARA 60

Query: 61  YDKAAREFRGVKAKTNFPLPSDD-LLNLNNKINNINNNQSPSQSSTVESSSREQPLMVDS 120
           YD AAREFRGVKAKTNFPLPSDD LLNLNNKINNINNNQSPSQSSTVESSSREQ LMVDS
Sbjct: 61  YDNAAREFRGVKAKTNFPLPSDDKLLNLNNKINNINNNQSPSQSSTVESSSREQALMVDS 120

Query: 121 SPLNLNLAHGMPGLTAAGAVTFPFQRYQIPMIGEVFSRGIPPSNHVLYFDAALRAGMIKT 180
           SPL+LNL HG+ GLT AG ++FPFQRYQIPMIGEVF+RGIPPSNHVLYFDAALR GMI +
Sbjct: 121 SPLDLNLGHGIGGLTTAGPISFPFQRYQIPMIGEVFTRGIPPSNHVLYFDAALRTGMINS 180

Query: 181 HPHPNQRLRFDHHHEAVSDFRREYAGGGVQSDSDSSSVVDMNGQDLKPRSGGGGVGGLDL 240
             HPNQRL FD   EAVSDFRR++AG GVQSDSDSSSVVDMNGQDLKPR G G  G LDL
Sbjct: 181 --HPNQRLHFDRIREAVSDFRRDFAGSGVQSDSDSSSVVDMNGQDLKPRGGSG--GRLDL 240

Query: 241 DLNFPPPESA 250
           DLNFPPPESA
Sbjct: 241 DLNFPPPESA 246

[Close]

BLAST of Carg15305-RA vs. ExPASy TrEMBL
Match: A0A1S3B0A2 (ethylene-responsive transcription factor 4-like OS=Cucumis melo OX=3656 GN=LOC103484503 PE=4 SV=1)

HSP 1 Score: 422.9 bits (1086), Expect = 9.1e-115
Identity = 219/250 (87.60%), Postives = 227/250 (90.80%), Query Frame = 0


Query: 1   MAPREKAVAVKANVGNVKEVHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA 60
           MAPREKAVAVK NVGNVKEVHFRGVRKRPWGRYAAEIRDP KKSRVWLGTFDTAEEAARA
Sbjct: 1   MAPREKAVAVKPNVGNVKEVHFRGVRKRPWGRYAAEIRDPSKKSRVWLGTFDTAEEAARA 60

Query: 61  YDKAAREFRGVKAKTNFPLPSDD-LLNLNNKINNINNNQSPSQSSTVESSSREQPLMVDS 120
           YD AAREFRGVKAKTNFPLPSDD LLNLNNKINNINNNQSPSQSSTVESSSREQ LMVDS
Sbjct: 61  YDNAAREFRGVKAKTNFPLPSDDKLLNLNNKINNINNNQSPSQSSTVESSSREQALMVDS 120

Query: 121 SPLNLNLAHGMPGLTAAGAVTFPFQRYQIPMIGEVFSRGIPPSNHVLYFDAALRAGMIKT 180
           SPL+LNL HG+ GLT AG ++FPFQRYQIPMIGEVF+RGIPPSNHVLYFDAALR GMI +
Sbjct: 121 SPLDLNLGHGIGGLTTAGPISFPFQRYQIPMIGEVFTRGIPPSNHVLYFDAALRTGMINS 180

Query: 181 HPHPNQRLRFDHHHEAVSDFRREYAGGGVQSDSDSSSVVDMNGQDLKPRSGGGGVGGLDL 240
             HPNQRL FD   EAVSDFRR++AG GVQSDSDSSSVVDMNGQDLKPR G G  G LDL
Sbjct: 181 --HPNQRLHFDRIREAVSDFRRDFAGSGVQSDSDSSSVVDMNGQDLKPRGGSG--GRLDL 240

Query: 241 DLNFPPPESA 250
           DLNFPPPESA
Sbjct: 241 DLNFPPPESA 246

[Close]

BLAST of Carg15305-RA vs. TAIR 10
Match: AT3G15210.1 (ethylene responsive element binding factor 4 )

HSP 1 Score: 141.7 bits (356), Expect = 7.7e-34
Identity = 110/237 (46.41%), Postives = 130/237 (54.85%), Query Frame = 0


Query: 16  NVKEVHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARAYDKAAREFRGVKAKT 75
           N KE+ +RGVRKRPWGRYAAEIRDP KK+RVWLGTFDTAEEAARAYD AAR+FRG KAKT
Sbjct: 19  NAKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAARDFRGAKAKT 78

Query: 76  NFPLPSDDLLNLNNKINNINNNQSPSQSSTVESSSREQPLMVDSS-----PLNLNLAHGM 135
           NFP      L L+++       +SPSQSST++ +S    L+V S+     P  L L+ G 
Sbjct: 79  NFP----TFLELSDQKVPTGFARSPSQSSTLDCAS-PPTLVVPSATAGNVPPQLELSLGG 138

Query: 136 PGLTAAGAVTFPFQRYQIPMIGEVFSRGIPPSNHVLYFDAALRAGMIKTHPHP-NQRLRF 195
            G    G+       YQIPM           S  V + D      + +  P P     R 
Sbjct: 139 GG---GGSC------YQIPM-----------SRPVYFLDLMGIGNVGRGQPPPVTSAFRS 198

Query: 196 DHHHEAVSDFRREYAGGGVQSDSDSSSVVDMNGQDLKPRSGGGGVGGLDLDLNFPPP 247
              H A           G QSDSDSSSVVD  G  ++ RS       LDLDLN PPP
Sbjct: 199 PVVHVATK------MACGAQSDSDSSSVVDFEG-GMEKRS-----QLLDLDLNLPPP 218

[Close]

BLAST of Carg15305-RA vs. TAIR 10
Match: AT1G28370.1 (ERF domain protein 11 )

HSP 1 Score: 127.5 bits (319), Expect = 1.5e-29
Identity = 77/119 (64.71%), Postives = 81/119 (68.07%), Query Frame = 0


Query: 1   MAPREKAVAVKANVGNVKEVHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARA 60
           MAP  K  AVK N GN   V +RGVRKRPWGRYAAEIRDP KKSRVWLGTFDT EEAARA
Sbjct: 1   MAPTVKTAAVKTNEGN--GVRYRGVRKRPWGRYAAEIRDPFKKSRVWLGTFDTPEEAARA 60

Query: 61  YDKAAREFRGVKAKTNFPLPSDDLLNLNNKINNINNNQSPSQSSTVESSSREQPLMVDS 120
           YDK A EFRG KAKTNFP         N   + ++  QS SQSSTVESS     L  DS
Sbjct: 61  YDKRAIEFRGAKAKTNFPC-------YNINAHCLSLTQSLSQSSTVESSFPNLNLGSDS 110

[Close]

BLAST of Carg15305-RA vs. TAIR 10
Match: AT5G44210.1 (erf domain protein 9 )

HSP 1 Score: 124.0 bits (310), Expect = 1.7e-28
Identity = 71/120 (59.17%), Postives = 83/120 (69.17%), Query Frame = 0


Query: 1   MAPRE---KAVAVKANVGNV--------KEVHFRGVRKRPWGRYAAEIRDPCKKSRVWLG 60
           MAPR+   +++AV    G          KEVHFRGVRKRPWGRYAAEIRDP KK+RVWLG
Sbjct: 1   MAPRQANGRSIAVSEGGGGKTMTMTTMRKEVHFRGVRKRPWGRYAAEIRDPGKKTRVWLG 60

Query: 61  TFDTAEEAARAYDKAAREFRGVKAKTNFPLPSDDLLNLNNKINNINNNQSPSQSSTVESS 110
           TFDTAEEAARAYD AAREFRG KAKTNFPLP +     +  +N+   N S    +TV ++
Sbjct: 61  TFDTAEEAARAYDTAAREFRGSKAKTNFPLPGE-----STTVNDGGENDSYVNRTTVTTA 115

[Close]

BLAST of Carg15305-RA vs. TAIR 10
Match: AT1G50640.1 (ethylene responsive element binding factor 3 )

HSP 1 Score: 119.0 bits (297), Expect = 5.4e-27
Identity = 63/92 (68.48%), Postives = 70/92 (76.09%), Query Frame = 0


Query: 10  VKANVGNVKEVHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARAYDKAAREFR 69
           V A  G+VKE+ FRGVRKRPWGR+AAEIRDP KK+RVWLGTFD+AEEAARAYD AAR  R
Sbjct: 16  VAAINGSVKEIRFRGVRKRPWGRFAAEIRDPWKKARVWLGTFDSAEEAARAYDSAARNLR 75

Query: 70  GVKAKTNFPLPSDDLLNLN---NKINNINNNQ 99
           G KAKTNFP+ S      N   N+I N N NQ
Sbjct: 76  GPKAKTNFPIDSSSPPPPNLRFNQIRNQNQNQ 107

[Close]

BLAST of Carg15305-RA vs. TAIR 10
Match: AT1G53170.1 (ethylene response factor 8 )

HSP 1 Score: 112.5 bits (280), Expect = 5.0e-25
Identity = 68/138 (49.28%), Postives = 84/138 (60.87%), Query Frame = 0


Query: 18  KEVHFRGVRKRPWGRYAAEIRDPCKKSRVWLGTFDTAEEAARAYDKAAREFRGVKAKTNF 77
           KE+ +RGVRKRPWGRYAAEIRDP KK+RVWLGTFDTA++AARAYD AAR+FRGVKAKTNF
Sbjct: 27  KEIRYRGVRKRPWGRYAAEIRDPVKKTRVWLGTFDTAQQAARAYDAAARDFRGVKAKTNF 86

Query: 78  PLPSDDLLNLNNKINNINNNQSPSQSSTVESSSREQPLMVDSSPLNLNLAHGMPGLTAAG 137
                           +    SP+QSSTV  S      +   +P +L L+ G  G     
Sbjct: 87  ---------------GVIVGSSPTQSSTVVDSPTAARFI---TPPHLELSLGGGGAC--- 136

Query: 138 AVTFPFQRYQIPMIGEVF 156
                  R +IP++  V+
Sbjct: 147 -------RRKIPLVHPVY 136

The following BLAST results are available for this feature:

BLAST of Carg15305-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022925660.1	3.2e-138	100.00	ethylene-responsive transcription factor 4-like [Cucurbita moschata] >KAG7034605...	[more]
XP_023545040.1	3.0e-136	99.60	ethylene-responsive transcription factor 4-like [Cucurbita pepo subsp. pepo]	[more]
KAG6604462.1	6.6e-136	99.20	Ethylene-responsive transcription factor 4, partial [Cucurbita argyrosperma subs...	[more]
XP_022978752.1	3.5e-129	95.98	ethylene-responsive transcription factor 4-like [Cucurbita maxima]	[more]
XP_038883348.1	8.1e-118	88.89	ethylene-responsive transcription factor 4-like [Benincasa hispida]	[more]

BLAST of Carg15305-RA vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q40477	2.1e-39	47.70	Ethylene-responsive transcription factor 4 OS=Nicotiana tabacum OX=4097 GN=ERF4 ...	[more]
Q9LW49	3.9e-38	46.34	Ethylene-responsive transcription factor 4 OS=Nicotiana sylvestris OX=4096 GN=ER...	[more]
O80340	1.1e-32	46.41	Ethylene-responsive transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=ER...	[more]
Q9C5I3	2.1e-28	64.71	Ethylene-responsive transcription factor 11 OS=Arabidopsis thaliana OX=3702 GN=E...	[more]
Q9FE67	2.4e-27	59.17	Ethylene-responsive transcription factor 9 OS=Arabidopsis thaliana OX=3702 GN=ER...	[more]

BLAST of Carg15305-RA vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EIT5	1.5e-138	100.00	ethylene-responsive transcription factor 4-like OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1ILY8	1.7e-129	95.98	ethylene-responsive transcription factor 4-like OS=Cucurbita maxima OX=3661 GN=L...	[more]
Q5S004	5.3e-115	88.00	Ethylene response factor 1 OS=Cucumis sativus OX=3659 GN=ERF1 PE=2 SV=1	[more]
A0A5A7UGN5	9.1e-115	87.60	Ethylene-responsive transcription factor 4-like OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S3B0A2	9.1e-115	87.60	ethylene-responsive transcription factor 4-like OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of Carg15305-RA vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15210.1	7.7e-34	46.41	ethylene responsive element binding factor 4	[more]
AT1G28370.1	1.5e-29	64.71	ERF domain protein 11	[more]
AT5G44210.1	1.7e-28	59.17	erf domain protein 9	[more]
AT1G50640.1	5.4e-27	68.48	ethylene responsive element binding factor 3	[more]
AT1G53170.1	5.0e-25	49.28	ethylene response factor 8	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 22..33 score: 60.91 coord: 44..60 score: 75.4
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 21..84 e-value: 4.6E-39 score: 145.8
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 21..70 e-value: 2.9E-14 score: 53.0
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 21..78 score: 23.538157
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 21..78 e-value: 4.40081E-31 score: 107.743
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 20..79 e-value: 8.5E-29 score: 101.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 88..115
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 204..249
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 208..222
None	No IPR available	PANTHER	PTHR31677	AP2 DOMAIN CLASS TRANSCRIPTION FACTOR	coord: 1..233
None	No IPR available	PANTHER	PTHR31677:SF151	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 4-LIKE	coord: 1..233
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 21..79

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg15305	Carg15305	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg15305-RA:1	Carg15305-RA:1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg15305-RA:cds	Carg15305-RA:cds	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg15305-RA	Carg15305-RA-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity