Carg15300-RA (mRNA) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg15300-RA
Type	mRNA
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	dof zinc finger protein DOF1.4
Location	Carg_Chr03: 9169931 .. 9171117 (-)
Sequence length	1105
RNA-Seq Expression	Carg15300-RA
Synteny	Carg15300-RA

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCAGCTTCCCGGATTATGGACAAACCCCGTCAAGAACAACAACAGCAGCAGCAGCAACAACGACCACCGGTAGCATCTGCTCTTAAGTGCCCTCGTTGTGATTCTTCCAACACCAAATTTTGTTACTACAACAATTACAGCCTTTCTCAGCCACGGCACTTCTGCAAAGCCTGTAAACGCTACTGGACCCGCGGCGGAACCCTAAGAAATGTCCCCGTCGGTGGTGGCTGCCGGAAGAACAAGCGCCTCAAATCTTCTTCTTCTTCTTCCTTCTCCTCAGTCAACGCTACTCCCACGTCAACCCCAACTCAAAAACCTCGCCTTCACAACAACTCCATCATCAATTCTGCTACTAATATTATTCCTTCTTCCCCAATGTTTTTTGGGGTTCATAACACTAACCCATCTCCCTTAAATCTTCAATTTTCAACTCTTGATTCTGTTTCTGGTCTTCTCAACCTTTCCCCGCCACCGCCGTTCGACGCCATTGGCAGTGGTTTAGGGTTTTCCCACATAGGTGATCTCCGTGAAACCTTCAATTCCCCTAAGAAAATTCAAGATATTTCAATTCATGCAACTCACTTCCATCCTCCCGCCATCTCATTCGATCGAAATTCGCAGCTTTTCGGTAATTTCGAAGCTGGTTTGATGAAGGAAGACTTGAACAGGTAAATCACCGTTGAACTCAAAAGTTTAAATTGATAGATTGAACGTATAAAAATTAATCATTTGTTCGCATTGACTTAATAGGCTGTCCCATAATCAAACCGAGCAAGTCGATCCATCAAATTTTTCCGACTCTTCTCGGTTCTGGAACTCGGCAACCACGGCGACGAGCAATTGGCATGATCCGACGAATAATGGGTCCTCAATTGCTTCTCTATTCTAGGAGATCAAAGCATTGGGTGTCTATATAAGAAAAGACAAAGAATAAAGTTGAGGAGAGGAGTGGGATCGGAGAGATCATGTCAGCTGCAAGAACAGCTCAAACCCTTAAACTTTATCGATGTGGGTTTGAGAATTTTATAGGTAATTGCGCTGAGAGGAACCTCGGATCCTCTTTCATTCGTCGCTATAATACCATCCTATCAACAATTTAGAATTTGGATTAATCTCACCTACGCATGGACTTACATGCATGTATTCAAAGGATCGGATACGTTTTTCTTTTCTTTTCTTTT

mRNA sequence

ATGGCTTCAGCTTCCCGGATTATGGACAAACCCCGTCAAGAACAACAACAGCAGCAGCAGCAACAACGACCACCGGTAGCATCTGCTCTTAAGTGCCCTCGTTGTGATTCTTCCAACACCAAATTTTGTTACTACAACAATTACAGCCTTTCTCAGCCACGGCACTTCTGCAAAGCCTGTAAACGCTACTGGACCCGCGGCGGAACCCTAAGAAATGTCCCCGTCGGTGGTGGCTGCCGGAAGAACAAGCGCCTCAAATCTTCTTCTTCTTCTTCCTTCTCCTCAGTCAACGCTACTCCCACGTCAACCCCAACTCAAAAACCTCGCCTTCACAACAACTCCATCATCAATTCTGCTACTAATATTATTCCTTCTTCCCCAATGTTTTTTGGGGTTCATAACACTAACCCATCTCCCTTAAATCTTCAATTTTCAACTCTTGATTCTGTTTCTGGTCTTCTCAACCTTTCCCCGCCACCGCCGTTCGACGCCATTGGCAGTGGTTTAGGGTTTTCCCACATAGGTGATCTCCGTGAAACCTTCAATTCCCCTAAGAAAATTCAAGATATTTCAATTCATGCAACTCACTTCCATCCTCCCGCCATCTCATTCGATCGAAATTCGCAGCTTTTCGGTAATTTCGAAGCTGGTTTGATGAAGGAAGACTTGAACAGGCTGTCCCATAATCAAACCGAGCAAGTCGATCCATCAAATTTTTCCGACTCTTCTCGGTTCTGGAACTCGGCAACCACGGCGACGAGCAATTGGCATGATCCGACGAATAATGGGTCCTCAATTGCTTCTCTATTCTAGGAGATCAAAGCATTGGGTGTCTATATAAGAAAAGACAAAGAATAAAGTTGAGGAGAGGAGTGGGATCGGAGAGATCATGTCAGCTGCAAGAACAGCTCAAACCCTTAAACTTTATCGATGTGGGTTTGAGAATTTTATAGGTAATTGCGCTGAGAGGAACCTCGGATCCTCTTTCATTCGTCGCTATAATACCATCCTATCAACAATTTAGAATTTGGATTAATCTCACCTACGCATGGACTTACATGCATGTATTCAAAGGATCGGATACGTTTTTCTTTTCTTTTCTTTT

Coding sequence (CDS)

ATGGCTTCAGCTTCCCGGATTATGGACAAACCCCGTCAAGAACAACAACAGCAGCAGCAGCAACAACGACCACCGGTAGCATCTGCTCTTAAGTGCCCTCGTTGTGATTCTTCCAACACCAAATTTTGTTACTACAACAATTACAGCCTTTCTCAGCCACGGCACTTCTGCAAAGCCTGTAAACGCTACTGGACCCGCGGCGGAACCCTAAGAAATGTCCCCGTCGGTGGTGGCTGCCGGAAGAACAAGCGCCTCAAATCTTCTTCTTCTTCTTCCTTCTCCTCAGTCAACGCTACTCCCACGTCAACCCCAACTCAAAAACCTCGCCTTCACAACAACTCCATCATCAATTCTGCTACTAATATTATTCCTTCTTCCCCAATGTTTTTTGGGGTTCATAACACTAACCCATCTCCCTTAAATCTTCAATTTTCAACTCTTGATTCTGTTTCTGGTCTTCTCAACCTTTCCCCGCCACCGCCGTTCGACGCCATTGGCAGTGGTTTAGGGTTTTCCCACATAGGTGATCTCCGTGAAACCTTCAATTCCCCTAAGAAAATTCAAGATATTTCAATTCATGCAACTCACTTCCATCCTCCCGCCATCTCATTCGATCGAAATTCGCAGCTTTTCGGTAATTTCGAAGCTGGTTTGATGAAGGAAGACTTGAACAGGCTGTCCCATAATCAAACCGAGCAAGTCGATCCATCAAATTTTTCCGACTCTTCTCGGTTCTGGAACTCGGCAACCACGGCGACGAGCAATTGGCATGATCCGACGAATAATGGGTCCTCAATTGCTTCTCTATTCTAG

Protein sequence

MASASRIMDKPRQEQQQQQQQQRPPVASALKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRLKSSSSSSFSSVNATPTSTPTQKPRLHNNSIINSATNIIPSSPMFFGVHNTNPSPLNLQFSTLDSVSGLLNLSPPPPFDAIGSGLGFSHIGDLRETFNSPKKIQDISIHATHFHPPAISFDRNSQLFGNFEAGLMKEDLNRLSHNQTEQVDPSNFSDSSRFWNSATTATSNWHDPTNNGSSIASLF

Homology

[Close]

BLAST of Carg15300-RA vs. NCBI nr
Match: KAG7034600.1 (Dof zinc finger protein DOF5.3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 543.9 bits (1400), Expect = 7.9e-151
Identity = 270/270 (100.00%), Postives = 270/270 (100.00%), Query Frame = 0


Query: 1   MASASRIMDKPRQEQQQQQQQQRPPVASALKCPRCDSSNTKFCYYNNYSLSQPRHFCKAC 60
           MASASRIMDKPRQEQQQQQQQQRPPVASALKCPRCDSSNTKFCYYNNYSLSQPRHFCKAC
Sbjct: 1   MASASRIMDKPRQEQQQQQQQQRPPVASALKCPRCDSSNTKFCYYNNYSLSQPRHFCKAC 60

Query: 61  KRYWTRGGTLRNVPVGGGCRKNKRLKSSSSSSFSSVNATPTSTPTQKPRLHNNSIINSAT 120
           KRYWTRGGTLRNVPVGGGCRKNKRLKSSSSSSFSSVNATPTSTPTQKPRLHNNSIINSAT
Sbjct: 61  KRYWTRGGTLRNVPVGGGCRKNKRLKSSSSSSFSSVNATPTSTPTQKPRLHNNSIINSAT 120

Query: 121 NIIPSSPMFFGVHNTNPSPLNLQFSTLDSVSGLLNLSPPPPFDAIGSGLGFSHIGDLRET 180
           NIIPSSPMFFGVHNTNPSPLNLQFSTLDSVSGLLNLSPPPPFDAIGSGLGFSHIGDLRET
Sbjct: 121 NIIPSSPMFFGVHNTNPSPLNLQFSTLDSVSGLLNLSPPPPFDAIGSGLGFSHIGDLRET 180

Query: 181 FNSPKKIQDISIHATHFHPPAISFDRNSQLFGNFEAGLMKEDLNRLSHNQTEQVDPSNFS 240
           FNSPKKIQDISIHATHFHPPAISFDRNSQLFGNFEAGLMKEDLNRLSHNQTEQVDPSNFS
Sbjct: 181 FNSPKKIQDISIHATHFHPPAISFDRNSQLFGNFEAGLMKEDLNRLSHNQTEQVDPSNFS 240

Query: 241 DSSRFWNSATTATSNWHDPTNNGSSIASLF 271
           DSSRFWNSATTATSNWHDPTNNGSSIASLF
Sbjct: 241 DSSRFWNSATTATSNWHDPTNNGSSIASLF 270

[Close]

BLAST of Carg15300-RA vs. NCBI nr
Match: KAG6604456.1 (Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 540.4 bits (1391), Expect = 8.7e-150
Identity = 268/270 (99.26%), Postives = 269/270 (99.63%), Query Frame = 0


Query: 1   MASASRIMDKPRQEQQQQQQQQRPPVASALKCPRCDSSNTKFCYYNNYSLSQPRHFCKAC 60
           MASASRIMDKPRQEQQQQQQQQRPPVASALKCPRCDSSNTKFCYYNNYSLSQPRHFCKAC
Sbjct: 1   MASASRIMDKPRQEQQQQQQQQRPPVASALKCPRCDSSNTKFCYYNNYSLSQPRHFCKAC 60

Query: 61  KRYWTRGGTLRNVPVGGGCRKNKRLKSSSSSSFSSVNATPTSTPTQKPRLHNNSIINSAT 120
           KRYWTRGGTLRNVPVGGGCRKNKRLKSSSSSSFSSVNATPTSTPTQKPRLHNNSIINSAT
Sbjct: 61  KRYWTRGGTLRNVPVGGGCRKNKRLKSSSSSSFSSVNATPTSTPTQKPRLHNNSIINSAT 120

Query: 121 NIIPSSPMFFGVHNTNPSPLNLQFSTLDSVSGLLNLSPPPPFDAIGSGLGFSHIGDLRET 180
           NIIPSSPMFFGVHNTNPSPLNLQFSTLDSVSGLLNLSPPPPFDAIGSGLGFSHIGDLRET
Sbjct: 121 NIIPSSPMFFGVHNTNPSPLNLQFSTLDSVSGLLNLSPPPPFDAIGSGLGFSHIGDLRET 180

Query: 181 FNSPKKIQDISIHATHFHPPAISFDRNSQLFGNFEAGLMKEDLNRLSHNQTEQVDPSNFS 240
           FNSPK+IQDISIHATHFHPPAISFDRNSQLFGNFEAGLMKEDLNRLSHNQTEQVDPSNFS
Sbjct: 181 FNSPKQIQDISIHATHFHPPAISFDRNSQLFGNFEAGLMKEDLNRLSHNQTEQVDPSNFS 240

Query: 241 DSSRFWNSATTATSNWHDPTNNGSSIASLF 271
           D SRFWNSATTATSNWHDPTNNGSSIASLF
Sbjct: 241 DPSRFWNSATTATSNWHDPTNNGSSIASLF 270

[Close]

BLAST of Carg15300-RA vs. NCBI nr
Match: XP_022925833.1 (dof zinc finger protein DOF1.4 [Cucurbita moschata])

HSP 1 Score: 540.4 bits (1391), Expect = 8.7e-150
Identity = 269/270 (99.63%), Postives = 269/270 (99.63%), Query Frame = 0


Query: 1   MASASRIMDKPRQEQQQQQQQQRPPVASALKCPRCDSSNTKFCYYNNYSLSQPRHFCKAC 60
           MASASRIMDKPRQEQQQQQQQQRPPVASALKCPRCDSSNTKFCYYNNYSLSQPRHFCKAC
Sbjct: 1   MASASRIMDKPRQEQQQQQQQQRPPVASALKCPRCDSSNTKFCYYNNYSLSQPRHFCKAC 60

Query: 61  KRYWTRGGTLRNVPVGGGCRKNKRLKSSSSSSFSSVNATPTSTPTQKPRLHNNSIINSAT 120
           KRYWTRGGTLRNVPVGGGCRKNKRLKSSSSSSFSSVNATPTSTPTQKPRLHNNSIINSAT
Sbjct: 61  KRYWTRGGTLRNVPVGGGCRKNKRLKSSSSSSFSSVNATPTSTPTQKPRLHNNSIINSAT 120

Query: 121 NIIPSSPMFFGVHNTNPSPLNLQFSTLDSVSGLLNLSPPPPFDAIGSGLGFSHIGDLRET 180
           NIIPSS MFFGVHNTNPSPLNLQFSTLDSVSGLLNLSPPPPFDAIGSGLGFSHIGDLRET
Sbjct: 121 NIIPSSRMFFGVHNTNPSPLNLQFSTLDSVSGLLNLSPPPPFDAIGSGLGFSHIGDLRET 180

Query: 181 FNSPKKIQDISIHATHFHPPAISFDRNSQLFGNFEAGLMKEDLNRLSHNQTEQVDPSNFS 240
           FNSPKKIQDISIHATHFHPPAISFDRNSQLFGNFEAGLMKEDLNRLSHNQTEQVDPSNFS
Sbjct: 181 FNSPKKIQDISIHATHFHPPAISFDRNSQLFGNFEAGLMKEDLNRLSHNQTEQVDPSNFS 240

Query: 241 DSSRFWNSATTATSNWHDPTNNGSSIASLF 271
           DSSRFWNSATTATSNWHDPTNNGSSIASLF
Sbjct: 241 DSSRFWNSATTATSNWHDPTNNGSSIASLF 270

[Close]

BLAST of Carg15300-RA vs. NCBI nr
Match: XP_023544408.1 (dof zinc finger protein DOF1.4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 521.5 bits (1342), Expect = 4.2e-144
Identity = 261/270 (96.67%), Postives = 262/270 (97.04%), Query Frame = 0


Query: 1   MASASRIMDKPRQEQQQQQQQQRPPVASALKCPRCDSSNTKFCYYNNYSLSQPRHFCKAC 60
           MASASRIMDKPRQE    QQQQRPPVA ALKCPRCDSSNTKFCYYNNYSLSQPRHFCKAC
Sbjct: 1   MASASRIMDKPRQE----QQQQRPPVAPALKCPRCDSSNTKFCYYNNYSLSQPRHFCKAC 60

Query: 61  KRYWTRGGTLRNVPVGGGCRKNKRLKSSSSSSFSSVNATPTSTPTQKPRLHNNSIINSAT 120
           KRYWTRGGTLRNVPVGGGCRKNKRLKSSSSSSFSSVNATPTSTPTQKPRLHNNSIINSAT
Sbjct: 61  KRYWTRGGTLRNVPVGGGCRKNKRLKSSSSSSFSSVNATPTSTPTQKPRLHNNSIINSAT 120

Query: 121 NIIPSSPMFFGVHNTNPSPLNLQFSTLDSVSGLLNLSPPPPFDAIGSGLGFSHIGDLRET 180
           NIIPSSPMFFGVHNTNPSPLNLQFSTLDSVSGLLNLSP PPFDAIGSGLGFSHIGDLRET
Sbjct: 121 NIIPSSPMFFGVHNTNPSPLNLQFSTLDSVSGLLNLSPLPPFDAIGSGLGFSHIGDLRET 180

Query: 181 FNSPKKIQDISIHATHFHPPAISFDRNSQLFGNFEAGLMKEDLNRLSHNQTEQVDPSNFS 240
           FNSPK+IQDISIHATHFHPPAISFDRNSQ FGNFEAGLMKEDLNRLSHNQTEQVDPSNFS
Sbjct: 181 FNSPKQIQDISIHATHFHPPAISFDRNSQFFGNFEAGLMKEDLNRLSHNQTEQVDPSNFS 240

Query: 241 DSSRFWNSATTATSNWHDPTNNGSSIASLF 271
           D SRFWNSATTATSNWHDPTNNGSSIASLF
Sbjct: 241 DPSRFWNSATTATSNWHDPTNNGSSIASLF 266

[Close]

BLAST of Carg15300-RA vs. NCBI nr
Match: XP_022978746.1 (dof zinc finger protein DOF1.4 [Cucurbita maxima])

HSP 1 Score: 498.8 bits (1283), Expect = 2.9e-137
Identity = 256/270 (94.81%), Postives = 258/270 (95.56%), Query Frame = 0


Query: 1   MASASRIMDKPRQEQQQQQQQQRPPVASALKCPRCDSSNTKFCYYNNYSLSQPRHFCKAC 60
           MASASRIMDKPRQEQQQQ     PPVA ALKCPRCDSSNTKFCYYNNYSLSQPRHFCKAC
Sbjct: 1   MASASRIMDKPRQEQQQQP----PPVAPALKCPRCDSSNTKFCYYNNYSLSQPRHFCKAC 60

Query: 61  KRYWTRGGTLRNVPVGGGCRKNKRLKSSSSSSFSSVNATPTSTPTQKPRLHNNSIINSAT 120
           KRYWTRGGTLRNVPVGGGCRKNKRLK SSSSSFSSVNATPTSTPTQKPRLHNNS INSAT
Sbjct: 61  KRYWTRGGTLRNVPVGGGCRKNKRLK-SSSSSFSSVNATPTSTPTQKPRLHNNS-INSAT 120

Query: 121 NIIPSSPMFFGVHNTNPSPLNLQFSTLDSVSGLLNLSPPPPFDAIGSGLGFSHIGDLRET 180
           NIIPSSPMFFGVHNTNPSPLNLQFSTLDSVSGLLNLS PPPFDAIG GLGFSHI DLRET
Sbjct: 121 NIIPSSPMFFGVHNTNPSPLNLQFSTLDSVSGLLNLS-PPPFDAIGCGLGFSHIADLRET 180

Query: 181 FNSPKKIQDISIHATHFHPPAISFDRNSQLFGNFEAGLMKEDLNRLSHNQTEQVDPSNFS 240
           FNSPK+IQDISIHATHFHPPAISFDRNSQLFGNFEAGLMKEDLNRLSHNQTEQV+PSNFS
Sbjct: 181 FNSPKQIQDISIHATHFHPPAISFDRNSQLFGNFEAGLMKEDLNRLSHNQTEQVNPSNFS 240

Query: 241 DSSRFWNSATTATSNWHDPTNNGSSIASLF 271
           D SRFWNSATTATSNWHDPTNNGSSIASLF
Sbjct: 241 DPSRFWNSATTATSNWHDPTNNGSSIASLF 263

[Close]

BLAST of Carg15300-RA vs. ExPASy Swiss-Prot
Match: Q9FZA4 (Dof zinc finger protein DOF1.4 OS=Arabidopsis thaliana OX=3702 GN=DOF1.4 PE=2 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 6.7e-36
Identity = 124/324 (38.27%), Postives = 166/324 (51.23%), Query Frame = 0


Query: 1   MASASRIMDKPRQEQQQQQQQQRPPVASALKCPRCDSSNTKFCYYNNYSLSQPRHFCKAC 60
           M S + I+    Q+QQQQQ QQ  P    LKCPRCDSSNTKFCYYNNYSLSQPRHFCKAC
Sbjct: 1   MQSKNMIVASSHQQQQQQQPQQPQP---QLKCPRCDSSNTKFCYYNNYSLSQPRHFCKAC 60

Query: 61  KRYWTRGGTLRNVPVGGGCRKNKRLK---SSSSSSFSSVNATPTSTPTQKPRLHNNSIIN 120
           KRYWTRGGTLRNVPVGG  RKNKR+K   ++++++ S+V+ T +S+P    ++ + S +N
Sbjct: 61  KRYWTRGGTLRNVPVGGSYRKNKRVKRPSTATTTTASTVSTTNSSSPNNPHQISHFSSMN 120

Query: 121 -------------SATNIIPSSPMFFGVHNTNPSPLNLQFSTLDSVSGLLNLSPPPPFDA 180
                        S  N +P  P  F   +   S   L+   L   SG  +LS      A
Sbjct: 121 HHPLFYGLSDHMSSCNNNLPMIPSRFSDSSKTCSSSGLESEFLS--SGFSSLS------A 180

Query: 181 IGSGL--GFSHIGDLRETF------NSP--------KKIQDISIHATHFHPP-------- 240
           +G GL    SH   +  +F      N P          +   S    H H P        
Sbjct: 181 LGLGLPHQMSHDHTINGSFINNSTTNKPFLLSGLFGSSMSSSSTLLQHPHKPMNNGGDML 240

Query: 241 ------AISFDRNSQLFGNFEAGLMKE-DLNRLSHN------QTEQVDPSNFSDSSRFWN 270
                  ++  ++  + GN E    KE  L+++S N       +  +DPSN+++    WN
Sbjct: 241 GQSHLQTLASLQDLHVGGNNEDMKYKEGKLDQISGNINGFMSSSSSLDPSNYNN---MWN 300

[Close]

BLAST of Carg15300-RA vs. ExPASy Swiss-Prot
Match: Q84TE9 (Dof zinc finger protein DOF5.3 OS=Arabidopsis thaliana OX=3702 GN=DOF5.3 PE=2 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 6.1e-29
Identity = 79/182 (43.41%), Postives = 106/182 (58.24%), Query Frame = 0


Query: 8   MDKPRQEQQQQQQQQRP-PVASALKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTR 67
           +D  +++        RP P   AL+CPRCDS+NTKFCYYNNYSL+QPR+FCK+C+RYWT+
Sbjct: 32  LDNDQKKPSPATAVTRPQPPELALRCPRCDSTNTKFCYYNNYSLTQPRYFCKSCRRYWTK 91

Query: 68  GGTLRNVPVGGGCRKNKRLKSSSSSSFSSVNATPTSTPTQKPRLHNNSIINSATNIIPSS 127
           GGTLRN+PVGGGCRKNKR   S+SS+  S+  TP      +P  H+  + ++A       
Sbjct: 92  GGTLRNIPVGGGCRKNKR---STSSAARSLRTTP------EPASHDGKVFSAAG------ 151

Query: 128 PMFFGVHNTNPSPLNLQFSTLDSVSGLLNLSPPPPFDAIG--SGLGFSHIGDLRETFNSP 187
             F G  N     L+L F+       LLN   P     +G  S LG SH  D+   F + 
Sbjct: 152 --FNGYSNNEHIDLSLAFA-------LLNKQHPGSSSQLGFHSELGSSHQSDMEGMFGTS 189

[Close]

BLAST of Carg15300-RA vs. ExPASy Swiss-Prot
Match: Q8L9V6 (Dof zinc finger protein DOF1.1 OS=Arabidopsis thaliana OX=3702 GN=DOF1.1 PE=1 SV=2)

HSP 1 Score: 127.9 bits (320), Expect = 1.8e-28
Identity = 91/236 (38.56%), Postives = 125/236 (52.97%), Query Frame = 0


Query: 16  QQQQQQQRPPVASALKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPV 75
           ++ +Q   PP+A  LKCPRCDSSNTKFCYYNNY+L+QPRHFCK C+RYWT+GG LRNVPV
Sbjct: 63  ERARQANIPPLAGPLKCPRCDSSNTKFCYYNNYNLTQPRHFCKGCRRYWTQGGALRNVPV 122

Query: 76  GGGCRKNKR------LKSSSSSS--FSSVNATPTSTPTQKPRLHNNSIINSATNIIPSSP 135
           GGGCR+N +      LKSSSSSS   SSVNA   S+     +L  N       +  P SP
Sbjct: 123 GGGCRRNNKKGKNGNLKSSSSSSKQSSSVNAQSPSS----GQLRTN-------HQFPFSP 182

Query: 136 MFFGVHNTNPSPLNLQFSTLDSVSGLLNLSPPPPFDAIGSGLGFSH--------IGDLRE 195
             + +       LNL  +  ++ +  +  S       + S LGF H         G++ E
Sbjct: 183 TLYNLTQLGGIGLNLAATNGNNQAHQIGSS------LMMSDLGFLHGRNTSTPMTGNIHE 242

Query: 196 TFNSPKKIQDISIHATHFHPPAISFDRNSQLFGNFEAGLMKEDLNRLSHNQTEQVD 236
             N+     ++        P A+ FD  + L+     G +  ++  +S + T  VD
Sbjct: 243 NNNNNNNENNLMASVGSLSPFAL-FDPTTGLYAFQNDGNIGNNVG-ISGSSTSMVD 279

[Close]

BLAST of Carg15300-RA vs. ExPASy Swiss-Prot
Match: Q9M2U1 (Dof zinc finger protein DOF3.6 OS=Arabidopsis thaliana OX=3702 GN=DOF3.6 PE=1 SV=2)

HSP 1 Score: 127.9 bits (320), Expect = 1.8e-28
Identity = 75/155 (48.39%), Postives = 93/155 (60.00%), Query Frame = 0


Query: 24  PPVASALKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNK 83
           P   +AL CPRCDS+NTKFCY+NNYSL+QPRHFCK C+RYWTRGG+LRNVPVGGG R+NK
Sbjct: 70  PLPEAALNCPRCDSTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGSLRNVPVGGGFRRNK 129

Query: 84  RLKSSSSSS--FSSVNATPTSTPTQKPRLHNNSIINSATNI------IPSSPMFFGVHNT 143
           R KS S S+   S+ N T TS+ T +P   N S  +S   I      +P  P    + + 
Sbjct: 130 RSKSRSKSTVVVSTDNTTSTSSLTSRPSYSNPSKFHSYGQIPEFNSNLPILPPLQSLGDY 189

Query: 144 NPSPLNLQF---------STLDSVSGLLNLSPPPP 162
           N S   L F         S + S  G+L+    PP
Sbjct: 190 NSSNTGLDFGGTQISNMISGMSSSGGILDAWRIPP 224

[Close]

BLAST of Carg15300-RA vs. ExPASy Swiss-Prot
Match: O24463 (Dof zinc finger protein PBF OS=Zea mays OX=4577 GN=PBF PE=1 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 8.8e-28
Identity = 64/114 (56.14%), Postives = 79/114 (69.30%), Query Frame = 0


Query: 19  QQQQRPPVASALKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGG 78
           +++ RP +  ALKCPRCDS+NTKFCYYNNYS+SQPR+FCKAC+RYWT GGTLRNVP+GGG
Sbjct: 49  ERKPRPQLPEALKCPRCDSNNTKFCYYNNYSMSQPRYFCKACRRYWTHGGTLRNVPIGGG 108

Query: 79  CRKNKR----LKSSSSSSFSSVNATPTSTPTQKPRLHNNSIINSATNIIPSSPM 129
           CRKNK     +  S +SS SS    P S  T      +N  IN    ++P+  M
Sbjct: 109 CRKNKHASRFVLGSHTSSSSSATYAPLSPSTNAS--SSNMSINKHMMMVPNMTM 160

[Close]

BLAST of Carg15300-RA vs. ExPASy TrEMBL
Match: A0A6J1EGC8 (dof zinc finger protein DOF1.4 OS=Cucurbita moschata OX=3662 GN=LOC111433122 PE=4 SV=1)

HSP 1 Score: 540.4 bits (1391), Expect = 4.2e-150
Identity = 269/270 (99.63%), Postives = 269/270 (99.63%), Query Frame = 0


Query: 1   MASASRIMDKPRQEQQQQQQQQRPPVASALKCPRCDSSNTKFCYYNNYSLSQPRHFCKAC 60
           MASASRIMDKPRQEQQQQQQQQRPPVASALKCPRCDSSNTKFCYYNNYSLSQPRHFCKAC
Sbjct: 1   MASASRIMDKPRQEQQQQQQQQRPPVASALKCPRCDSSNTKFCYYNNYSLSQPRHFCKAC 60

Query: 61  KRYWTRGGTLRNVPVGGGCRKNKRLKSSSSSSFSSVNATPTSTPTQKPRLHNNSIINSAT 120
           KRYWTRGGTLRNVPVGGGCRKNKRLKSSSSSSFSSVNATPTSTPTQKPRLHNNSIINSAT
Sbjct: 61  KRYWTRGGTLRNVPVGGGCRKNKRLKSSSSSSFSSVNATPTSTPTQKPRLHNNSIINSAT 120

Query: 121 NIIPSSPMFFGVHNTNPSPLNLQFSTLDSVSGLLNLSPPPPFDAIGSGLGFSHIGDLRET 180
           NIIPSS MFFGVHNTNPSPLNLQFSTLDSVSGLLNLSPPPPFDAIGSGLGFSHIGDLRET
Sbjct: 121 NIIPSSRMFFGVHNTNPSPLNLQFSTLDSVSGLLNLSPPPPFDAIGSGLGFSHIGDLRET 180

Query: 181 FNSPKKIQDISIHATHFHPPAISFDRNSQLFGNFEAGLMKEDLNRLSHNQTEQVDPSNFS 240
           FNSPKKIQDISIHATHFHPPAISFDRNSQLFGNFEAGLMKEDLNRLSHNQTEQVDPSNFS
Sbjct: 181 FNSPKKIQDISIHATHFHPPAISFDRNSQLFGNFEAGLMKEDLNRLSHNQTEQVDPSNFS 240

Query: 241 DSSRFWNSATTATSNWHDPTNNGSSIASLF 271
           DSSRFWNSATTATSNWHDPTNNGSSIASLF
Sbjct: 241 DSSRFWNSATTATSNWHDPTNNGSSIASLF 270

[Close]

BLAST of Carg15300-RA vs. ExPASy TrEMBL
Match: A0A6J1INW3 (dof zinc finger protein DOF1.4 OS=Cucurbita maxima OX=3661 GN=LOC111478610 PE=4 SV=1)

HSP 1 Score: 498.8 bits (1283), Expect = 1.4e-137
Identity = 256/270 (94.81%), Postives = 258/270 (95.56%), Query Frame = 0


Query: 1   MASASRIMDKPRQEQQQQQQQQRPPVASALKCPRCDSSNTKFCYYNNYSLSQPRHFCKAC 60
           MASASRIMDKPRQEQQQQ     PPVA ALKCPRCDSSNTKFCYYNNYSLSQPRHFCKAC
Sbjct: 1   MASASRIMDKPRQEQQQQP----PPVAPALKCPRCDSSNTKFCYYNNYSLSQPRHFCKAC 60

Query: 61  KRYWTRGGTLRNVPVGGGCRKNKRLKSSSSSSFSSVNATPTSTPTQKPRLHNNSIINSAT 120
           KRYWTRGGTLRNVPVGGGCRKNKRLK SSSSSFSSVNATPTSTPTQKPRLHNNS INSAT
Sbjct: 61  KRYWTRGGTLRNVPVGGGCRKNKRLK-SSSSSFSSVNATPTSTPTQKPRLHNNS-INSAT 120

Query: 121 NIIPSSPMFFGVHNTNPSPLNLQFSTLDSVSGLLNLSPPPPFDAIGSGLGFSHIGDLRET 180
           NIIPSSPMFFGVHNTNPSPLNLQFSTLDSVSGLLNLS PPPFDAIG GLGFSHI DLRET
Sbjct: 121 NIIPSSPMFFGVHNTNPSPLNLQFSTLDSVSGLLNLS-PPPFDAIGCGLGFSHIADLRET 180

Query: 181 FNSPKKIQDISIHATHFHPPAISFDRNSQLFGNFEAGLMKEDLNRLSHNQTEQVDPSNFS 240
           FNSPK+IQDISIHATHFHPPAISFDRNSQLFGNFEAGLMKEDLNRLSHNQTEQV+PSNFS
Sbjct: 181 FNSPKQIQDISIHATHFHPPAISFDRNSQLFGNFEAGLMKEDLNRLSHNQTEQVNPSNFS 240

Query: 241 DSSRFWNSATTATSNWHDPTNNGSSIASLF 271
           D SRFWNSATTATSNWHDPTNNGSSIASLF
Sbjct: 241 DPSRFWNSATTATSNWHDPTNNGSSIASLF 263

[Close]

BLAST of Carg15300-RA vs. ExPASy TrEMBL
Match: A0A6J1EGJ0 (dof zinc finger protein DOF1.4-like OS=Cucurbita moschata OX=3662 GN=LOC111433895 PE=4 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 9.0e-84
Identity = 188/292 (64.38%), Postives = 201/292 (68.84%), Query Frame = 0


Query: 1   MASASRIMDKPRQEQQQQQQQQRPPVASALKCPRCDSSNTKFCYYNNYSLSQPRHFCKAC 60
           MAS S IMDKPRQ+QQ++QQQ  PP+  ALKCPRCDSSNTKFCYYNNYSLSQPRHFCKAC
Sbjct: 1   MASPSPIMDKPRQQQQRRQQQ--PPLPPALKCPRCDSSNTKFCYYNNYSLSQPRHFCKAC 60

Query: 61  KRYWTRGGTLRNVPVGGGCRKNKRLK-SSSSSSFSSVNATPTSTPTQKPRLHNNSIINSA 120
           KRYWTRGGTLRNVPVGGGCRKNKRLK SSSSS+ SSVN T TSTP+Q P   N+  IN+ 
Sbjct: 61  KRYWTRGGTLRNVPVGGGCRKNKRLKVSSSSSNSSSVNGTSTSTPSQNPSFLNS--INAT 120

Query: 121 TNIIPSS-------PMFFGVHNTNPSPLNLQFSTLDSVSGLLNLSPPPPFDAIGSGLGF- 180
           T  I SS       PMFFG                              FDAIG GLGF 
Sbjct: 121 TANISSSASTHINNPMFFG------------------------------FDAIGGGLGFS 180

Query: 181 -----SHIGDLRETFNSPKKIQDISIHATHFHPPAISFDRNSQLFGNFEAGL----MK-- 240
                SHIGDLR+ FN  K+IQDIS+++ HFH P ISFDRNSQL  NFEA L    MK  
Sbjct: 181 SPGFLSHIGDLRDGFNPAKQIQDISLNSNHFHHPTISFDRNSQLSSNFEASLTMPPMKEA 240

Query: 241 --EDLNRLSHNQTEQVDPSNFSDSSRFWNSATTATSNWHDPTNNGSSIASLF 271
             E LNRL  N TEQVD SNFSD S FWNS T AT NWHDPTNNGSSIASLF
Sbjct: 241 KMEGLNRLRQNHTEQVDLSNFSDPSHFWNSTTAATGNWHDPTNNGSSIASLF 258

[Close]

BLAST of Carg15300-RA vs. ExPASy TrEMBL
Match: A0A6J1KR08 (dof zinc finger protein DOF1.4-like OS=Cucurbita maxima OX=3661 GN=LOC111497470 PE=4 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 4.4e-83
Identity = 187/291 (64.26%), Postives = 198/291 (68.04%), Query Frame = 0


Query: 1   MASASRIMDKPRQEQQQQQQQQRPPVASALKCPRCDSSNTKFCYYNNYSLSQPRHFCKAC 60
           MAS S IM+KPRQ+QQ       PP+  ALKCPRCDSSNTKFCYYNNYSLSQPRHFCKAC
Sbjct: 1   MASPSPIMEKPRQQQQ-------PPLPPALKCPRCDSSNTKFCYYNNYSLSQPRHFCKAC 60

Query: 61  KRYWTRGGTLRNVPVGGGCRKNKRLK-SSSSSSFSSVNATPTSTPTQKPRLHNNSIINSA 120
           KRYWTRGGTLRNVPVGGGCRKNKRLK SSSS+S SSVN T TSTP+Q P   N+  IN+ 
Sbjct: 61  KRYWTRGGTLRNVPVGGGCRKNKRLKVSSSSNSSSSVNGTSTSTPSQNPSFLNS--INAT 120

Query: 121 TNIIPSS-------PMFFGVHNTNPSPLNLQFSTLDSVSGLLNLSPPPPFDAIGSGLGF- 180
           T  I SS       PMFFG                              FDAIGSGLGF 
Sbjct: 121 TANISSSASTHINNPMFFG------------------------------FDAIGSGLGFS 180

Query: 181 -----SHIGDLRETFNSPKKIQDISIHATHFHPPAISFDRNSQLFGNFEAGL---MK--- 240
                SHIGDLRE FNS K+IQDIS+++ HFH P ISFDRNSQL GNFEA L   MK   
Sbjct: 181 SSGFLSHIGDLREGFNSAKQIQDISLNSNHFHHPTISFDRNSQLSGNFEASLTMPMKEVK 240

Query: 241 -EDLNRLSHNQTEQVDPSNFSDSSRFWNSATTATSNWHDPTNNGSSIASLF 271
            E LNRL  N TEQVD SNFSD S FWNS T AT  WHDPTNNGSSIASLF
Sbjct: 241 MEGLNRLRQNHTEQVDLSNFSDPSHFWNSTTAATGTWHDPTNNGSSIASLF 252

[Close]

BLAST of Carg15300-RA vs. ExPASy TrEMBL
Match: A0A5A7UBU9 (Dof zinc finger protein DOF1.7-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007570 PE=4 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 1.8e-71
Identity = 174/283 (61.48%), Postives = 192/283 (67.84%), Query Frame = 0


Query: 1   MASASRIMDKPRQEQQQQQQQQRPPVASALKCPRCDSSNTKFCYYNNYSLSQPRHFCKAC 60
           MAS+SRIMDKPR  QQQQ        +  LKCPRCDSSNTKFCYYNNYSLSQPRHFCKAC
Sbjct: 1   MASSSRIMDKPRHHQQQQSS------SGTLKCPRCDSSNTKFCYYNNYSLSQPRHFCKAC 60

Query: 61  KRYWTRGGTLRNVPVGGGCRKNKRLKSSSSSSFSS-VNATPTSTPTQKPRLHNNSIINSA 120
           KRYWTRGGTLRNVPVGGGCRKNKRLK+SSSSS SS VNA  TSTP+Q PRL  ++ INS 
Sbjct: 61  KRYWTRGGTLRNVPVGGGCRKNKRLKTSSSSSSSSLVNANSTSTPSQNPRLLLHTSINST 120

Query: 121 T--NIIPSSPMFFGVHNTNPSPLNLQFSTLDSVSGLLNLSPPPPFDAIGSGLGFSHIGDL 180
           T  NI+ SS     +++TN S     F  LDS+ G             G GLGFS  G L
Sbjct: 121 TAPNIVSSS----ALNHTNSS----MFFGLDSIGG------------GGGGLGFSSSG-L 180

Query: 181 RETFNSPKKIQDISIHATHFHPPAISFDRNSQLFGNFEAGLMK-------EDLNRLSHNQ 240
              FN+P        ++ HFH P ISFDRNS L GN +  LM        EDLNRL  NQ
Sbjct: 181 LSHFNNP---HQQPFNSNHFHHPTISFDRNSHLLGNIDPNLMTSMKEIKIEDLNRLCQNQ 240

Query: 241 TEQVDPSNFSD-SSRFWNS-ATTATSNWHDPTN-NGSSIASLF 271
           TEQ+D SNFSD SS +WNS  TTAT NWHDPTN NGSS+ASLF
Sbjct: 241 TEQIDLSNFSDPSSIYWNSGTTTATGNWHDPTNYNGSSVASLF 253

[Close]

BLAST of Carg15300-RA vs. TAIR 10
Match: AT1G28310.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 152.5 bits (384), Expect = 4.8e-37
Identity = 124/324 (38.27%), Postives = 166/324 (51.23%), Query Frame = 0


Query: 1   MASASRIMDKPRQEQQQQQQQQRPPVASALKCPRCDSSNTKFCYYNNYSLSQPRHFCKAC 60
           M S + I+    Q+QQQQQ QQ  P    LKCPRCDSSNTKFCYYNNYSLSQPRHFCKAC
Sbjct: 1   MQSKNMIVASSHQQQQQQQPQQPQP---QLKCPRCDSSNTKFCYYNNYSLSQPRHFCKAC 60

Query: 61  KRYWTRGGTLRNVPVGGGCRKNKRLK---SSSSSSFSSVNATPTSTPTQKPRLHNNSIIN 120
           KRYWTRGGTLRNVPVGG  RKNKR+K   ++++++ S+V+ T +S+P    ++ + S +N
Sbjct: 61  KRYWTRGGTLRNVPVGGSYRKNKRVKRPSTATTTTASTVSTTNSSSPNNPHQISHFSSMN 120

Query: 121 -------------SATNIIPSSPMFFGVHNTNPSPLNLQFSTLDSVSGLLNLSPPPPFDA 180
                        S  N +P  P  F   +   S   L+   L   SG  +LS      A
Sbjct: 121 HHPLFYGLSDHMSSCNNNLPMIPSRFSDSSKTCSSSGLESEFLS--SGFSSLS------A 180

Query: 181 IGSGL--GFSHIGDLRETF------NSP--------KKIQDISIHATHFHPP-------- 240
           +G GL    SH   +  +F      N P          +   S    H H P        
Sbjct: 181 LGLGLPHQMSHDHTINGSFINNSTTNKPFLLSGLFGSSMSSSSTLLQHPHKPMNNGGDML 240

Query: 241 ------AISFDRNSQLFGNFEAGLMKE-DLNRLSHN------QTEQVDPSNFSDSSRFWN 270
                  ++  ++  + GN E    KE  L+++S N       +  +DPSN+++    WN
Sbjct: 241 GQSHLQTLASLQDLHVGGNNEDMKYKEGKLDQISGNINGFMSSSSSLDPSNYNN---MWN 300

[Close]

BLAST of Carg15300-RA vs. TAIR 10
Match: AT1G28310.2 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 152.5 bits (384), Expect = 4.8e-37
Identity = 124/324 (38.27%), Postives = 166/324 (51.23%), Query Frame = 0


Query: 1   MASASRIMDKPRQEQQQQQQQQRPPVASALKCPRCDSSNTKFCYYNNYSLSQPRHFCKAC 60
           M S + I+    Q+QQQQQ QQ  P    LKCPRCDSSNTKFCYYNNYSLSQPRHFCKAC
Sbjct: 15  MQSKNMIVASSHQQQQQQQPQQPQP---QLKCPRCDSSNTKFCYYNNYSLSQPRHFCKAC 74

Query: 61  KRYWTRGGTLRNVPVGGGCRKNKRLK---SSSSSSFSSVNATPTSTPTQKPRLHNNSIIN 120
           KRYWTRGGTLRNVPVGG  RKNKR+K   ++++++ S+V+ T +S+P    ++ + S +N
Sbjct: 75  KRYWTRGGTLRNVPVGGSYRKNKRVKRPSTATTTTASTVSTTNSSSPNNPHQISHFSSMN 134

Query: 121 -------------SATNIIPSSPMFFGVHNTNPSPLNLQFSTLDSVSGLLNLSPPPPFDA 180
                        S  N +P  P  F   +   S   L+   L   SG  +LS      A
Sbjct: 135 HHPLFYGLSDHMSSCNNNLPMIPSRFSDSSKTCSSSGLESEFLS--SGFSSLS------A 194

Query: 181 IGSGL--GFSHIGDLRETF------NSP--------KKIQDISIHATHFHPP-------- 240
           +G GL    SH   +  +F      N P          +   S    H H P        
Sbjct: 195 LGLGLPHQMSHDHTINGSFINNSTTNKPFLLSGLFGSSMSSSSTLLQHPHKPMNNGGDML 254

Query: 241 ------AISFDRNSQLFGNFEAGLMKE-DLNRLSHN------QTEQVDPSNFSDSSRFWN 270
                  ++  ++  + GN E    KE  L+++S N       +  +DPSN+++    WN
Sbjct: 255 GQSHLQTLASLQDLHVGGNNEDMKYKEGKLDQISGNINGFMSSSSSLDPSNYNN---MWN 314

[Close]

BLAST of Carg15300-RA vs. TAIR 10
Match: AT5G60200.1 (TARGET OF MONOPTEROS 6 )

HSP 1 Score: 129.4 bits (324), Expect = 4.3e-30
Identity = 79/182 (43.41%), Postives = 106/182 (58.24%), Query Frame = 0


Query: 8   MDKPRQEQQQQQQQQRP-PVASALKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTR 67
           +D  +++        RP P   AL+CPRCDS+NTKFCYYNNYSL+QPR+FCK+C+RYWT+
Sbjct: 32  LDNDQKKPSPATAVTRPQPPELALRCPRCDSTNTKFCYYNNYSLTQPRYFCKSCRRYWTK 91

Query: 68  GGTLRNVPVGGGCRKNKRLKSSSSSSFSSVNATPTSTPTQKPRLHNNSIINSATNIIPSS 127
           GGTLRN+PVGGGCRKNKR   S+SS+  S+  TP      +P  H+  + ++A       
Sbjct: 92  GGTLRNIPVGGGCRKNKR---STSSAARSLRTTP------EPASHDGKVFSAAG------ 151

Query: 128 PMFFGVHNTNPSPLNLQFSTLDSVSGLLNLSPPPPFDAIG--SGLGFSHIGDLRETFNSP 187
             F G  N     L+L F+       LLN   P     +G  S LG SH  D+   F + 
Sbjct: 152 --FNGYSNNEHIDLSLAFA-------LLNKQHPGSSSQLGFHSELGSSHQSDMEGMFGTS 189

[Close]

BLAST of Carg15300-RA vs. TAIR 10
Match: AT1G07640.2 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 127.9 bits (320), Expect = 1.3e-29
Identity = 91/236 (38.56%), Postives = 125/236 (52.97%), Query Frame = 0


Query: 16  QQQQQQQRPPVASALKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPV 75
           ++ +Q   PP+A  LKCPRCDSSNTKFCYYNNY+L+QPRHFCK C+RYWT+GG LRNVPV
Sbjct: 63  ERARQANIPPLAGPLKCPRCDSSNTKFCYYNNYNLTQPRHFCKGCRRYWTQGGALRNVPV 122

Query: 76  GGGCRKNKR------LKSSSSSS--FSSVNATPTSTPTQKPRLHNNSIINSATNIIPSSP 135
           GGGCR+N +      LKSSSSSS   SSVNA   S+     +L  N       +  P SP
Sbjct: 123 GGGCRRNNKKGKNGNLKSSSSSSKQSSSVNAQSPSS----GQLRTN-------HQFPFSP 182

Query: 136 MFFGVHNTNPSPLNLQFSTLDSVSGLLNLSPPPPFDAIGSGLGFSH--------IGDLRE 195
             + +       LNL  +  ++ +  +  S       + S LGF H         G++ E
Sbjct: 183 TLYNLTQLGGIGLNLAATNGNNQAHQIGSS------LMMSDLGFLHGRNTSTPMTGNIHE 242

Query: 196 TFNSPKKIQDISIHATHFHPPAISFDRNSQLFGNFEAGLMKEDLNRLSHNQTEQVD 236
             N+     ++        P A+ FD  + L+     G +  ++  +S + T  VD
Sbjct: 243 NNNNNNNENNLMASVGSLSPFAL-FDPTTGLYAFQNDGNIGNNVG-ISGSSTSMVD 279

[Close]

BLAST of Carg15300-RA vs. TAIR 10
Match: AT1G07640.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 127.9 bits (320), Expect = 1.3e-29
Identity = 91/236 (38.56%), Postives = 125/236 (52.97%), Query Frame = 0


Query: 16  QQQQQQQRPPVASALKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPV 75
           ++ +Q   PP+A  LKCPRCDSSNTKFCYYNNY+L+QPRHFCK C+RYWT+GG LRNVPV
Sbjct: 7   ERARQANIPPLAGPLKCPRCDSSNTKFCYYNNYNLTQPRHFCKGCRRYWTQGGALRNVPV 66

Query: 76  GGGCRKNKR------LKSSSSSS--FSSVNATPTSTPTQKPRLHNNSIINSATNIIPSSP 135
           GGGCR+N +      LKSSSSSS   SSVNA   S+     +L  N       +  P SP
Sbjct: 67  GGGCRRNNKKGKNGNLKSSSSSSKQSSSVNAQSPSS----GQLRTN-------HQFPFSP 126

Query: 136 MFFGVHNTNPSPLNLQFSTLDSVSGLLNLSPPPPFDAIGSGLGFSH--------IGDLRE 195
             + +       LNL  +  ++ +  +  S       + S LGF H         G++ E
Sbjct: 127 TLYNLTQLGGIGLNLAATNGNNQAHQIGSS------LMMSDLGFLHGRNTSTPMTGNIHE 186

Query: 196 TFNSPKKIQDISIHATHFHPPAISFDRNSQLFGNFEAGLMKEDLNRLSHNQTEQVD 236
             N+     ++        P A+ FD  + L+     G +  ++  +S + T  VD
Sbjct: 187 NNNNNNNENNLMASVGSLSPFAL-FDPTTGLYAFQNDGNIGNNVG-ISGSSTSMVD 223

The following BLAST results are available for this feature:

BLAST of Carg15300-RA vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7034600.1	7.9e-151	100.00	Dof zinc finger protein DOF5.3, partial [Cucurbita argyrosperma subsp. argyrospe...	[more]
KAG6604456.1	8.7e-150	99.26	Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022925833.1	8.7e-150	99.63	dof zinc finger protein DOF1.4 [Cucurbita moschata]	[more]
XP_023544408.1	4.2e-144	96.67	dof zinc finger protein DOF1.4 [Cucurbita pepo subsp. pepo]	[more]
XP_022978746.1	2.9e-137	94.81	dof zinc finger protein DOF1.4 [Cucurbita maxima]	[more]

BLAST of Carg15300-RA vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FZA4	6.7e-36	38.27	Dof zinc finger protein DOF1.4 OS=Arabidopsis thaliana OX=3702 GN=DOF1.4 PE=2 SV...	[more]
Q84TE9	6.1e-29	43.41	Dof zinc finger protein DOF5.3 OS=Arabidopsis thaliana OX=3702 GN=DOF5.3 PE=2 SV...	[more]
Q8L9V6	1.8e-28	38.56	Dof zinc finger protein DOF1.1 OS=Arabidopsis thaliana OX=3702 GN=DOF1.1 PE=1 SV...	[more]
Q9M2U1	1.8e-28	48.39	Dof zinc finger protein DOF3.6 OS=Arabidopsis thaliana OX=3702 GN=DOF3.6 PE=1 SV...	[more]
O24463	8.8e-28	56.14	Dof zinc finger protein PBF OS=Zea mays OX=4577 GN=PBF PE=1 SV=1	[more]

BLAST of Carg15300-RA vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EGC8	4.2e-150	99.63	dof zinc finger protein DOF1.4 OS=Cucurbita moschata OX=3662 GN=LOC111433122 PE=...	[more]
A0A6J1INW3	1.4e-137	94.81	dof zinc finger protein DOF1.4 OS=Cucurbita maxima OX=3661 GN=LOC111478610 PE=4 ...	[more]
A0A6J1EGJ0	9.0e-84	64.38	dof zinc finger protein DOF1.4-like OS=Cucurbita moschata OX=3662 GN=LOC11143389...	[more]
A0A6J1KR08	4.4e-83	64.26	dof zinc finger protein DOF1.4-like OS=Cucurbita maxima OX=3661 GN=LOC111497470 ...	[more]
A0A5A7UBU9	1.8e-71	61.48	Dof zinc finger protein DOF1.7-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]

BLAST of Carg15300-RA vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G28310.1	4.8e-37	38.27	Dof-type zinc finger DNA-binding family protein	[more]
AT1G28310.2	4.8e-37	38.27	Dof-type zinc finger DNA-binding family protein	[more]
AT5G60200.1	4.3e-30	43.41	TARGET OF MONOPTEROS 6	[more]
AT1G07640.2	1.3e-29	38.56	Dof-type zinc finger DNA-binding family protein	[more]
AT1G07640.1	1.3e-29	38.56	Dof-type zinc finger DNA-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003851	Zinc finger, Dof-type	PFAM	PF02701	zf-Dof	coord: 29..84 e-value: 9.3E-34 score: 115.4
IPR003851	Zinc finger, Dof-type	PROSITE	PS01361	ZF_DOF_1	coord: 32..68
IPR003851	Zinc finger, Dof-type	PROSITE	PS50884	ZF_DOF_2	coord: 30..84 score: 29.524885
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 75..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..30
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 9..26
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 251..270
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 83..109
None	No IPR available	PANTHER	PTHR31992:SF141	DOF ZINC FINGER PROTEIN DOF1.4-RELATED	coord: 15..184
None	No IPR available	PANTHER	PTHR31992	DOF ZINC FINGER PROTEIN DOF1.4-RELATED	coord: 15..184

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg15300	Carg15300	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg15300-RA:2	Carg15300-RA:2	exon
Carg15300-RA:1	Carg15300-RA:1	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg15300-RA:three_prime_utr	Carg15300-RA:three_prime_utr	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg15300-RA:cds	Carg15300-RA:cds_2	CDS
Carg15300-RA:cds	Carg15300-RA:cds	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg15300-RA	Carg15300-RA-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding