Carg12175-RA (mRNA) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg12175-RA
Type	mRNA
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Acyl-[acyl-carrier-protein] hydrolase
Location	Carg_Chr11: 2561570 .. 2565109 (-)
Sequence length	2681
RNA-Seq Expression	Carg12175-RA
Synteny	Carg12175-RA

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTAACACCCACAGTTGGCCTCAACCCTCCGCCCTCTCTCCTTCTCCATATTTTTCCTTTTCCTTTCGTTCTTTATTTTCCATTTTGAAACGAGCTAAATAAAAACAACTAAATAAATTTCCGAACGCCGAACACGAAGAATCATCAAATCCAACTACAGCAAACCCTACGATCCGCGGCGAATAAGGAGGGATCTGCATTCCAACTTCCTGCATTACTCCTTTTTCCTTGTCGTCTTTTCGCCAGAGGATTTTTGACATCCTTTTGCTTCTCTTTTCTTCCGACGGTCAAGGTACGGGTGCCGTAGTTTTCTTCTCTTTTGGTTTTTATCTGTTTCTTGTCTGATCTGGAAGTTGAGAGAATGACGGAGCTAGGCTGCTTTTGCCGTGTTTTGTGTTTGACGAATTAATCGTTTGAGATCTGTATTTGAAGGTTTTGTTTTAGTTGTTTTGTTTATCGTTCTTTGTTTTCTGGGCCACGGAGCGTGTTTTTTGAAGTCTGGACGTCTATTTTATTATTGCTGTTACGTACGGTTTATTTCGCTCGACGGAATTTTGCGTTATTCCTGGTTTATAGTTTTTCTATGGTTTTATTGGATGCTTATTTTGATTTCCGTTACTGATCTTGTGTTTATTTAGCTCTGTGGTTCTACGTTTGGGACGAGATCTGTTTTCTCTTCTACTGTAGATTTATGAAAGGTTTCTTCTGATCTCGCTATAAGCGTGCAAGTGGATGGTTCTCTTTTCAGCTCATGCATTCATTGATTCTTGGTGCGATTTTTTCTTAAATAACTTGTTGTCATTTTCGCTCTTTCTGCTCTTTTTTTCTTTCTTGTCTTTGTATGCTATACGTGAAAATACTCGCAGTGTCTCTTGATGATCTTGGATTAGTTTTTTGTTTCGCTCAATCTTGCTATGCTTCACGGACTTTTTTCTTTGACAAAGTTTTACAAATTGTCTATTTGAATTTATCGCGTAGATTCATGTTTTATATTCCGGTTCCGCGAATCTCTGTTTTTAAATGACTTTCTAGTTCGTTTTAGGTCCAATCTTTTGATGTCTATGGGTTCACTTCTGTGGACACCCCTCTCTTTTCCTTCTGTGATTATTCACTGAATCTTACCTCGTACACGATTTTGTTCACTTTCGTAATTATTGTACACGAGTTTAATGTATATTTTTATGCTTCTAGAGAAAGAGGAAGTTCGTTAATTACATGTATGACCAAATATTGATGATTCCTATATCAACTTTATGAAGTTTTCTTAATGAATGGATACTAAATTCCATGTAGTTGCGTATAGGTTGCTAATGTATGTTTCCCCAAGAACTCAGCCATCTTTCATGTACTTAGGCTTCTGTTGATAGAGGGAAATTCGTTGGAACGAGTCTCTGGTTGGCACATTACAACCGTTTTCTGGTAGAAAGTTCGACATGGTTGCCACTGCAGCTACTTCTGCCTTTTTTCCTGCTATTTCTCTGTCCTCGGACGCTGGATCAAAGTCAACTAAGTTCGGCAGTGGTTCTGTCAATCCTGGAGGAAGCAGGCCGAAATCTTCTTCCCGTGGTTTGCAAGTTAAGGCTAATGCCCAAGCTCCTTCAAAGATAAATGGTACTTCCGTTGGATTGGAGGGTGTCAAGCTGGACGACGACTTGACATCACCTCCTCCAAGGACTTTCATAAACGTACTTCCTGACTGGAGCATGCTTCTTGCTGCTATCACTACCATTTTCCTGGCGGCTGAGAAGCAGTGGATGATGCTCGACTGGAAACCTAGGCGGCCTGACATGCTTATCGATTCGTTTGGTTTGGGAAGAATTGTGCAGGATGGTCTCGTGTTTCGGCAGAACTTTTCAATTAGATCATATGAAATTGGTGCAGATCGGACTGCATCTATAGAAACATTAATGAATCATTTGCAGGTACATGATTGATCATTCTGTTTCTTTCTTGTTGGATATTAATTCTTATGCTGTTTATCTGCGGTAAATTTTCAAAAATTTGGTTGCTCTTGCCGGTCAAAGGCACTATAGGTTGTTAATTCTTCTATATCTTCATTATTTGGAAACAGTGAGATGATATCTTGTTCTTTATACAGGAAACTGCACTTAATCATGTAAAAACTGCTGGACTACTTGGTGATGGATTTGGTTCTACACCAGAAATGTGTAAAAAAAACTTGATATGGGTAGTTGCAAAGATGCAGGTTGTGGTAGATAGATACCCTACTTGGTAAGTTGCCGTATGTTTCTTTTATATATGTTTATATATATATTCTAGAAAAGCAAAATAATTTGCAGCTGCTAACATTTATTCATTTTTACAGTAGCATTATCTTTCCATTGATCATGTGGGATGAATGATTTAGATGTTTGACTTCTATGGATTTTCATATTTTCAGGAAATGTAGACAACAACTAGTTATGTCTTTTAGGTTGTCTATTTTAAAAGTGCTTCTGTAATTTTCATTAGAAATGTGTTCTGATATCTGGAAAACTTCACCTCTCATGGTTATGGTACTATATGTGTAATTAGAAATAGTTCTTGCGAATTATTTATAGGTTAAAGTTCTCGAGGACTGAATCATTTTTCCCCCCTTTTTGTCAGGGGTGATGTTGTTCAAGTAGACACTTGGGTCGGTGCATCTGGGAAGAATGGCATGCGACGAGATTGGCTTGTTCGTGATTGCAAAACTGGTGAAACTCTTACTAGGGCCTCAAGGTATAGGTTTCCGCTGCCAGCAAGTAATCCGTGTTTTTTCTTTCCCTCTCCTCAATTCCCCTGATTATTATTCCACCGCTTGATCATAACTGCCTTTCTAATAACTGTGTGGGATTGTTTTTCTTTTCCTGTCCAATGGCAGTGTCTGGGTGATGATGAATAAGCAGACAAGAAAATTATCAAAGATTCCTGGGGAAGTTAGAGGGGAAATAGAGCCTTATTTTGCAAATTCACCTCCCATAGTGGAAGAAGATGGCAGGAAACTTACCAAACTTGATGATGATAGTGCTGATTACATACGTACAGGTTTGACGGTAAGTTATACTCCCTTTTGGTTAAATATATTTACTAGTAGGCTTCCTCGTTTCATTCTTGTGAGTGACATGTATTTCGAATTGCAGCCTAGATGGAGCGATTTAGATGTCAACCAGCATGTCAATAACGTGAAGTACATTGGCTGGGTACTCGAGGTAGTTTCTCTTTTCAAAATGACTCTTGGTTTCTCCTTTATCCGAACATGTCTCTGACCAAAAGATTTGGTACACACAGAGTGCACCTCTGCCAATCCTGGAGAGTCACGAACTCTCTACCATGACTTTGGAATACAGGAGAGAATGTGGAAGGGACAGCGTGCTGCAATCCCTTACTGCTGTGTCTAGTGCTGGTATCAGCAATTTGGCCGATGCTGGTGACATTGAGTGCCACCACTTGCTTCGACTTGAAAATGGAGCTGAGATTGTTAGAGGAAGGACTGAGTGGAGGCCCAAACATGCGACAAACTTCGGGATGGTGGGTCAGATTCCAGCCGGAAATACTTAA

mRNA sequence

ACTAACACCCACAGTTGGCCTCAACCCTCCGCCCTCTCTCCTTCTCCATATTTTTCCTTTTCCTTTCGTTCTTTATTTTCCATTTTGAAACGAGCTAAATAAAAACAACTAAATAAATTTCCGAACGCCGAACACGAAGAATCATCAAATCCAACTACAGCAAACCCTACGATCCGCGGCGAATAAGGAGGGATCTGCATTCCAACTTCCTGCATTACTCCTTTTTCCTTGTCGTCTTTTCGCCAGAGGATTTTTGACATCCTTTTGCTTCTCTTTTCTTCCGACGGTCAAGGTACGGGTGCCGTAGTTTTCTTCTCTTTTGGTTTTTATCTGTTTCTTGTCTGATCTGGAAGTTGAGAGAATGACGGAGCTAGGCTGCTTTTGCCGTGTTTTGTGTTTGACGAATTAATCGTTTGAGATCTGTATTTGAAGGTTTTGTTTTAGTTGTTTTGTTTATCGTTCTTTGTTTTCTGGGCCACGGAGCGTGTTTTTTGAAGTCTGGACGTCTATTTTATTATTGCTGTTACGTACGGTTTATTTCGCTCGACGGAATTTTGCGTTATTCCTGGTTTATAGTTTTTCTATGGTTTTATTGGATGCTTATTTTGATTTCCGTTACTGATCTTGTGTTTATTTAGCTCTGTGGTTCTACGTTTGGGACGAGATCTGTTTTCTCTTCTACTGTAGATTTATGAAAGGTTTCTTCTGATCTCGCTATAAGCGTGCAAGTGGATGGTTCTCTTTTCAGCTCATGCATTCATTGATTCTTGGTGCGATTTTTTCTTAAATAACTTGTTGTCATTTTCGCTCTTTCTGCTCTTTTTTTCTTTCTTGTCTTTGTATGCTATACGTGAAAATACTCGCAGTGTCTCTTGATGATCTTGGATTAGTTTTTTGTTTCGCTCAATCTTGCTATGCTTCACGGACTTTTTTCTTTGACAAAGTTTTACAAATTGTCTATTTGAATTTATCGCGTAGATTCATGTTTTATATTCCGGTTCCGCGAATCTCTGTTTTTAAATGACTTTCTAGTTCGTTTTAGGTCCAATCTTTTGATGTCTATGGGTTCACTTCTGTGGACACCCCTCTCTTTTCCTTCTGTGATTATTCACTGAATCTTACCTCGTACACGATTTTGTTCACTTTCGTAATTATTGTACACGAGTTTAATGTATATTTTTATGCTTCTAGAGAAAGAGGAAGTTCGTTAATTACATGTATGACCAAATATTGATGATTCCTATATCAACTTTATGAAGTTTTCTTAATGAATGGATACTAAATTCCATGTAGTTGCGTATAGGTTGCTAATGTATGTTTCCCCAAGAACTCAGCCATCTTTCATGTACTTAGGCTTCTGTTGATAGAGGGAAATTCGTTGGAACGAGTCTCTGGTTGGCACATTACAACCGTTTTCTGGTAGAAAGTTCGACATGGTTGCCACTGCAGCTACTTCTGCCTTTTTTCCTGCTATTTCTCTGTCCTCGGACGCTGGATCAAAGTCAACTAAGTTCGGCAGTGGTTCTGTCAATCCTGGAGGAAGCAGGCCGAAATCTTCTTCCCGTGGTTTGCAAGTTAAGGCTAATGCCCAAGCTCCTTCAAAGATAAATGGTACTTCCGTTGGATTGGAGGGTGTCAAGCTGGACGACGACTTGACATCACCTCCTCCAAGGACTTTCATAAACGTACTTCCTGACTGGAGCATGCTTCTTGCTGCTATCACTACCATTTTCCTGGCGGCTGAGAAGCAGTGGATGATGCTCGACTGGAAACCTAGGCGGCCTGACATGCTTATCGATTCGTTTGGTTTGGGAAGAATTGTGCAGGATGGTCTCGTGTTTCGGCAGAACTTTTCAATTAGATCATATGAAATTGGTGCAGATCGGACTGCATCTATAGAAACATTAATGAATCATTTGCAGGAAACTGCACTTAATCATGTAAAAACTGCTGGACTACTTGGTGATGGATTTGGTTCTACACCAGAAATGTGTAAAAAAAACTTGATATGGGTAGTTGCAAAGATGCAGGTTGTGGTAGATAGATACCCTACTTGGGGTGATGTTGTTCAAGTAGACACTTGGGTCGGTGCATCTGGGAAGAATGGCATGCGACGAGATTGGCTTGTTCGTGATTGCAAAACTGGTGAAACTCTTACTAGGGCCTCAAGTGTCTGGGTGATGATGAATAAGCAGACAAGAAAATTATCAAAGATTCCTGGGGAAGTTAGAGGGGAAATAGAGCCTTATTTTGCAAATTCACCTCCCATAGTGGAAGAAGATGGCAGGAAACTTACCAAACTTGATGATGATAGTGCTGATTACATACGTACAGGTTTGACGCCTAGATGGAGCGATTTAGATGTCAACCAGCATGTCAATAACGTGAAGTACATTGGCTGGGTACTCGAGAGTGCACCTCTGCCAATCCTGGAGAGTCACGAACTCTCTACCATGACTTTGGAATACAGGAGAGAATGTGGAAGGGACAGCGTGCTGCAATCCCTTACTGCTGTGTCTAGTGCTGGTATCAGCAATTTGGCCGATGCTGGTGACATTGAGTGCCACCACTTGCTTCGACTTGAAAATGGAGCTGAGATTGTTAGAGGAAGGACTGAGTGGAGGCCCAAACATGCGACAAACTTCGGGATGGTGGGTCAGATTCCAGCCGGAAATACTTAA

Coding sequence (CDS)

ATGGTTGCCACTGCAGCTACTTCTGCCTTTTTTCCTGCTATTTCTCTGTCCTCGGACGCTGGATCAAAGTCAACTAAGTTCGGCAGTGGTTCTGTCAATCCTGGAGGAAGCAGGCCGAAATCTTCTTCCCGTGGTTTGCAAGTTAAGGCTAATGCCCAAGCTCCTTCAAAGATAAATGGTACTTCCGTTGGATTGGAGGGTGTCAAGCTGGACGACGACTTGACATCACCTCCTCCAAGGACTTTCATAAACGTACTTCCTGACTGGAGCATGCTTCTTGCTGCTATCACTACCATTTTCCTGGCGGCTGAGAAGCAGTGGATGATGCTCGACTGGAAACCTAGGCGGCCTGACATGCTTATCGATTCGTTTGGTTTGGGAAGAATTGTGCAGGATGGTCTCGTGTTTCGGCAGAACTTTTCAATTAGATCATATGAAATTGGTGCAGATCGGACTGCATCTATAGAAACATTAATGAATCATTTGCAGGAAACTGCACTTAATCATGTAAAAACTGCTGGACTACTTGGTGATGGATTTGGTTCTACACCAGAAATGTGTAAAAAAAACTTGATATGGGTAGTTGCAAAGATGCAGGTTGTGGTAGATAGATACCCTACTTGGGGTGATGTTGTTCAAGTAGACACTTGGGTCGGTGCATCTGGGAAGAATGGCATGCGACGAGATTGGCTTGTTCGTGATTGCAAAACTGGTGAAACTCTTACTAGGGCCTCAAGTGTCTGGGTGATGATGAATAAGCAGACAAGAAAATTATCAAAGATTCCTGGGGAAGTTAGAGGGGAAATAGAGCCTTATTTTGCAAATTCACCTCCCATAGTGGAAGAAGATGGCAGGAAACTTACCAAACTTGATGATGATAGTGCTGATTACATACGTACAGGTTTGACGCCTAGATGGAGCGATTTAGATGTCAACCAGCATGTCAATAACGTGAAGTACATTGGCTGGGTACTCGAGAGTGCACCTCTGCCAATCCTGGAGAGTCACGAACTCTCTACCATGACTTTGGAATACAGGAGAGAATGTGGAAGGGACAGCGTGCTGCAATCCCTTACTGCTGTGTCTAGTGCTGGTATCAGCAATTTGGCCGATGCTGGTGACATTGAGTGCCACCACTTGCTTCGACTTGAAAATGGAGCTGAGATTGTTAGAGGAAGGACTGAGTGGAGGCCCAAACATGCGACAAACTTCGGGATGGTGGGTCAGATTCCAGCCGGAAATACTTAA

Protein sequence

MVATAATSAFFPAISLSSDAGSKSTKFGSGSVNPGGSRPKSSSRGLQVKANAQAPSKINGTSVGLEGVKLDDDLTSPPPRTFINVLPDWSMLLAAITTIFLAAEKQWMMLDWKPRRPDMLIDSFGLGRIVQDGLVFRQNFSIRSYEIGADRTASIETLMNHLQETALNHVKTAGLLGDGFGSTPEMCKKNLIWVVAKMQVVVDRYPTWGDVVQVDTWVGASGKNGMRRDWLVRDCKTGETLTRASSVWVMMNKQTRKLSKIPGEVRGEIEPYFANSPPIVEEDGRKLTKLDDDSADYIRTGLTPRWSDLDVNQHVNNVKYIGWVLESAPLPILESHELSTMTLEYRRECGRDSVLQSLTAVSSAGISNLADAGDIECHHLLRLENGAEIVRGRTEWRPKHATNFGMVGQIPAGNT

Homology

[Close]

BLAST of Carg12175-RA vs. NCBI nr
Match: KAG7021828.1 (Palmitoyl-acyl carrier protein thioesterase, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 838.6 bits (2165), Expect = 2.4e-239
Identity = 415/415 (100.00%), Postives = 415/415 (100.00%), Query Frame = 0


Query: 1   MVATAATSAFFPAISLSSDAGSKSTKFGSGSVNPGGSRPKSSSRGLQVKANAQAPSKING 60
           MVATAATSAFFPAISLSSDAGSKSTKFGSGSVNPGGSRPKSSSRGLQVKANAQAPSKING
Sbjct: 1   MVATAATSAFFPAISLSSDAGSKSTKFGSGSVNPGGSRPKSSSRGLQVKANAQAPSKING 60

Query: 61  TSVGLEGVKLDDDLTSPPPRTFINVLPDWSMLLAAITTIFLAAEKQWMMLDWKPRRPDML 120
           TSVGLEGVKLDDDLTSPPPRTFINVLPDWSMLLAAITTIFLAAEKQWMMLDWKPRRPDML
Sbjct: 61  TSVGLEGVKLDDDLTSPPPRTFINVLPDWSMLLAAITTIFLAAEKQWMMLDWKPRRPDML 120

Query: 121 IDSFGLGRIVQDGLVFRQNFSIRSYEIGADRTASIETLMNHLQETALNHVKTAGLLGDGF 180
           IDSFGLGRIVQDGLVFRQNFSIRSYEIGADRTASIETLMNHLQETALNHVKTAGLLGDGF
Sbjct: 121 IDSFGLGRIVQDGLVFRQNFSIRSYEIGADRTASIETLMNHLQETALNHVKTAGLLGDGF 180

Query: 181 GSTPEMCKKNLIWVVAKMQVVVDRYPTWGDVVQVDTWVGASGKNGMRRDWLVRDCKTGET 240
           GSTPEMCKKNLIWVVAKMQVVVDRYPTWGDVVQVDTWVGASGKNGMRRDWLVRDCKTGET
Sbjct: 181 GSTPEMCKKNLIWVVAKMQVVVDRYPTWGDVVQVDTWVGASGKNGMRRDWLVRDCKTGET 240

Query: 241 LTRASSVWVMMNKQTRKLSKIPGEVRGEIEPYFANSPPIVEEDGRKLTKLDDDSADYIRT 300
           LTRASSVWVMMNKQTRKLSKIPGEVRGEIEPYFANSPPIVEEDGRKLTKLDDDSADYIRT
Sbjct: 241 LTRASSVWVMMNKQTRKLSKIPGEVRGEIEPYFANSPPIVEEDGRKLTKLDDDSADYIRT 300

Query: 301 GLTPRWSDLDVNQHVNNVKYIGWVLESAPLPILESHELSTMTLEYRRECGRDSVLQSLTA 360
           GLTPRWSDLDVNQHVNNVKYIGWVLESAPLPILESHELSTMTLEYRRECGRDSVLQSLTA
Sbjct: 301 GLTPRWSDLDVNQHVNNVKYIGWVLESAPLPILESHELSTMTLEYRRECGRDSVLQSLTA 360

Query: 361 VSSAGISNLADAGDIECHHLLRLENGAEIVRGRTEWRPKHATNFGMVGQIPAGNT 416
           VSSAGISNLADAGDIECHHLLRLENGAEIVRGRTEWRPKHATNFGMVGQIPAGNT
Sbjct: 361 VSSAGISNLADAGDIECHHLLRLENGAEIVRGRTEWRPKHATNFGMVGQIPAGNT 415

[Close]

BLAST of Carg12175-RA vs. NCBI nr
Match: XP_022933531.1 (palmitoyl-acyl carrier protein thioesterase, chloroplastic-like [Cucurbita moschata] >XP_022933532.1 palmitoyl-acyl carrier protein thioesterase, chloroplastic-like [Cucurbita moschata] >XP_022933533.1 palmitoyl-acyl carrier protein thioesterase, chloroplastic-like [Cucurbita moschata] >XP_022933534.1 palmitoyl-acyl carrier protein thioesterase, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 837.0 bits (2161), Expect = 6.9e-239
Identity = 414/415 (99.76%), Postives = 414/415 (99.76%), Query Frame = 0


Query: 1   MVATAATSAFFPAISLSSDAGSKSTKFGSGSVNPGGSRPKSSSRGLQVKANAQAPSKING 60
           MVATAATSAFFPAISLSSDAGSKSTKFGSGSVNPGGSRPKSSSRGLQVKANAQAPSKING
Sbjct: 1   MVATAATSAFFPAISLSSDAGSKSTKFGSGSVNPGGSRPKSSSRGLQVKANAQAPSKING 60

Query: 61  TSVGLEGVKLDDDLTSPPPRTFINVLPDWSMLLAAITTIFLAAEKQWMMLDWKPRRPDML 120
           TSVGLEGVKLDDDLTSPPPRTFINVLPDWSMLLAAITTIFLAAEKQWMMLDWKPRRPDML
Sbjct: 61  TSVGLEGVKLDDDLTSPPPRTFINVLPDWSMLLAAITTIFLAAEKQWMMLDWKPRRPDML 120

Query: 121 IDSFGLGRIVQDGLVFRQNFSIRSYEIGADRTASIETLMNHLQETALNHVKTAGLLGDGF 180
           IDSFGLGRIVQDGLVFRQNFSIRSYEIGADRTASIETLMNHLQETALNHVKTAGLLGDGF
Sbjct: 121 IDSFGLGRIVQDGLVFRQNFSIRSYEIGADRTASIETLMNHLQETALNHVKTAGLLGDGF 180

Query: 181 GSTPEMCKKNLIWVVAKMQVVVDRYPTWGDVVQVDTWVGASGKNGMRRDWLVRDCKTGET 240
           GSTPEMCKKNLIWVVAKMQVVVDRYPTWGDVVQVDTWVGASGKNGMRRDWLVRDCKTGET
Sbjct: 181 GSTPEMCKKNLIWVVAKMQVVVDRYPTWGDVVQVDTWVGASGKNGMRRDWLVRDCKTGET 240

Query: 241 LTRASSVWVMMNKQTRKLSKIPGEVRGEIEPYFANSPPIVEEDGRKLTKLDDDSADYIRT 300
           LTRASSVWVMMNKQTRKLSKIPGEVRGEIEPYFANSPPIVEEDGRKLTKLDDDSADYIRT
Sbjct: 241 LTRASSVWVMMNKQTRKLSKIPGEVRGEIEPYFANSPPIVEEDGRKLTKLDDDSADYIRT 300

Query: 301 GLTPRWSDLDVNQHVNNVKYIGWVLESAPLPILESHELSTMTLEYRRECGRDSVLQSLTA 360
           GLTPRWSDLDVNQHVNNVKYIGWVLESAPLPILESHELSTMTLEYRRECGRDSVLQSLTA
Sbjct: 301 GLTPRWSDLDVNQHVNNVKYIGWVLESAPLPILESHELSTMTLEYRRECGRDSVLQSLTA 360

Query: 361 VSSAGISNLADAGDIECHHLLRLENGAEIVRGRTEWRPKHATNFGMVGQIPAGNT 416
           VS AGISNLADAGDIECHHLLRLENGAEIVRGRTEWRPKHATNFGMVGQIPAGNT
Sbjct: 361 VSGAGISNLADAGDIECHHLLRLENGAEIVRGRTEWRPKHATNFGMVGQIPAGNT 415

[Close]

BLAST of Carg12175-RA vs. NCBI nr
Match: KAG6587939.1 (Palmitoyl-acyl carrier protein thioesterase, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 834.7 bits (2155), Expect = 3.4e-238
Identity = 414/415 (99.76%), Postives = 414/415 (99.76%), Query Frame = 0


Query: 1   MVATAATSAFFPAISLSSDAGSKSTKFGSGSVNPGGSRPKSSSRGLQVKANAQAPSKING 60
           MVATAATSAFFPAISLSSDAGSKSTKFGSGSVNPGGSR KSSSRGLQVKANAQAPSKING
Sbjct: 1   MVATAATSAFFPAISLSSDAGSKSTKFGSGSVNPGGSRLKSSSRGLQVKANAQAPSKING 60

Query: 61  TSVGLEGVKLDDDLTSPPPRTFINVLPDWSMLLAAITTIFLAAEKQWMMLDWKPRRPDML 120
           TSVGLEGVKLDDDLTSPPPRTFINVLPDWSMLLAAITTIFLAAEKQWMMLDWKPRRPDML
Sbjct: 61  TSVGLEGVKLDDDLTSPPPRTFINVLPDWSMLLAAITTIFLAAEKQWMMLDWKPRRPDML 120

Query: 121 IDSFGLGRIVQDGLVFRQNFSIRSYEIGADRTASIETLMNHLQETALNHVKTAGLLGDGF 180
           IDSFGLGRIVQDGLVFRQNFSIRSYEIGADRTASIETLMNHLQETALNHVKTAGLLGDGF
Sbjct: 121 IDSFGLGRIVQDGLVFRQNFSIRSYEIGADRTASIETLMNHLQETALNHVKTAGLLGDGF 180

Query: 181 GSTPEMCKKNLIWVVAKMQVVVDRYPTWGDVVQVDTWVGASGKNGMRRDWLVRDCKTGET 240
           GSTPEMCKKNLIWVVAKMQVVVDRYPTWGDVVQVDTWVGASGKNGMRRDWLVRDCKTGET
Sbjct: 181 GSTPEMCKKNLIWVVAKMQVVVDRYPTWGDVVQVDTWVGASGKNGMRRDWLVRDCKTGET 240

Query: 241 LTRASSVWVMMNKQTRKLSKIPGEVRGEIEPYFANSPPIVEEDGRKLTKLDDDSADYIRT 300
           LTRASSVWVMMNKQTRKLSKIPGEVRGEIEPYFANSPPIVEEDGRKLTKLDDDSADYIRT
Sbjct: 241 LTRASSVWVMMNKQTRKLSKIPGEVRGEIEPYFANSPPIVEEDGRKLTKLDDDSADYIRT 300

Query: 301 GLTPRWSDLDVNQHVNNVKYIGWVLESAPLPILESHELSTMTLEYRRECGRDSVLQSLTA 360
           GLTPRWSDLDVNQHVNNVKYIGWVLESAPLPILESHELSTMTLEYRRECGRDSVLQSLTA
Sbjct: 301 GLTPRWSDLDVNQHVNNVKYIGWVLESAPLPILESHELSTMTLEYRRECGRDSVLQSLTA 360

Query: 361 VSSAGISNLADAGDIECHHLLRLENGAEIVRGRTEWRPKHATNFGMVGQIPAGNT 416
           VSSAGISNLADAGDIECHHLLRLENGAEIVRGRTEWRPKHATNFGMVGQIPAGNT
Sbjct: 361 VSSAGISNLADAGDIECHHLLRLENGAEIVRGRTEWRPKHATNFGMVGQIPAGNT 415

[Close]

BLAST of Carg12175-RA vs. NCBI nr
Match: XP_023531198.1 (palmitoyl-acyl carrier protein thioesterase, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023531199.1 palmitoyl-acyl carrier protein thioesterase, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023531200.1 palmitoyl-acyl carrier protein thioesterase, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 833.2 bits (2151), Expect = 1.0e-237
Identity = 411/415 (99.04%), Postives = 413/415 (99.52%), Query Frame = 0


Query: 1   MVATAATSAFFPAISLSSDAGSKSTKFGSGSVNPGGSRPKSSSRGLQVKANAQAPSKING 60
           MVATAATSAFFPAISLSSD+G+KSTKFG GSVNPGGSRPKSSSRGLQVKANAQAPSKING
Sbjct: 1   MVATAATSAFFPAISLSSDSGAKSTKFGGGSVNPGGSRPKSSSRGLQVKANAQAPSKING 60

Query: 61  TSVGLEGVKLDDDLTSPPPRTFINVLPDWSMLLAAITTIFLAAEKQWMMLDWKPRRPDML 120
           TSVGLEGVKLDDDLTSPPPRTFINVLPDWSMLLAAITTIFLAAEKQWMMLDWKPRRPDML
Sbjct: 61  TSVGLEGVKLDDDLTSPPPRTFINVLPDWSMLLAAITTIFLAAEKQWMMLDWKPRRPDML 120

Query: 121 IDSFGLGRIVQDGLVFRQNFSIRSYEIGADRTASIETLMNHLQETALNHVKTAGLLGDGF 180
           IDSFGLGRIVQDGLVFRQNFSIRSYEIGADRTASIETLMNHLQETALNHVKTAGLLGDGF
Sbjct: 121 IDSFGLGRIVQDGLVFRQNFSIRSYEIGADRTASIETLMNHLQETALNHVKTAGLLGDGF 180

Query: 181 GSTPEMCKKNLIWVVAKMQVVVDRYPTWGDVVQVDTWVGASGKNGMRRDWLVRDCKTGET 240
           GSTPEMCKKNLIWVVAKMQVVVDRYPTWGDVVQVDTWVGASGKNGMRRDWLVRDCKTGET
Sbjct: 181 GSTPEMCKKNLIWVVAKMQVVVDRYPTWGDVVQVDTWVGASGKNGMRRDWLVRDCKTGET 240

Query: 241 LTRASSVWVMMNKQTRKLSKIPGEVRGEIEPYFANSPPIVEEDGRKLTKLDDDSADYIRT 300
           LTRASSVWVMMNKQTRKLSKIPGEVRGEIEPYFANSPPIVEEDGRKLTKLDDDSADYIRT
Sbjct: 241 LTRASSVWVMMNKQTRKLSKIPGEVRGEIEPYFANSPPIVEEDGRKLTKLDDDSADYIRT 300

Query: 301 GLTPRWSDLDVNQHVNNVKYIGWVLESAPLPILESHELSTMTLEYRRECGRDSVLQSLTA 360
           GLTPRWSDLDVNQHVNNVKYIGWVLESAPLPILESHELSTMTLEYRRECGRDSVLQSLTA
Sbjct: 301 GLTPRWSDLDVNQHVNNVKYIGWVLESAPLPILESHELSTMTLEYRRECGRDSVLQSLTA 360

Query: 361 VSSAGISNLADAGDIECHHLLRLENGAEIVRGRTEWRPKHATNFGMVGQIPAGNT 416
           VS AGISNLADAGDIECHHLLRLENGAEIVRGRTEWRPKHATNFGMVGQIPAGNT
Sbjct: 361 VSGAGISNLADAGDIECHHLLRLENGAEIVRGRTEWRPKHATNFGMVGQIPAGNT 415

[Close]

BLAST of Carg12175-RA vs. NCBI nr
Match: XP_038879532.1 (palmitoyl-acyl carrier protein thioesterase, chloroplastic-like [Benincasa hispida] >XP_038879533.1 palmitoyl-acyl carrier protein thioesterase, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 803.5 bits (2074), Expect = 8.5e-229
Identity = 397/416 (95.43%), Postives = 407/416 (97.84%), Query Frame = 0


Query: 1   MVATAATSAFFPAISLSSDAGSKSTKFGSGSVNPGGSRPKSSSRGLQVKANAQAPSKING 60
           MVATAATSAFFPAIS SSD+G+KSTKFGSGSVNPGGSRPKSSSRGLQVKANAQAP KING
Sbjct: 1   MVATAATSAFFPAISPSSDSGAKSTKFGSGSVNPGGSRPKSSSRGLQVKANAQAPPKING 60

Query: 61  TSVGLEGVKLDDDL-TSPPPRTFINVLPDWSMLLAAITTIFLAAEKQWMMLDWKPRRPDM 120
           TSVGLEGV  DDDL TSPPPRTFIN+LPDWSMLLAAITTIFLAAEKQWMMLDWKPRRPDM
Sbjct: 61  TSVGLEGVMFDDDLTTSPPPRTFINLLPDWSMLLAAITTIFLAAEKQWMMLDWKPRRPDM 120

Query: 121 LIDSFGLGRIVQDGLVFRQNFSIRSYEIGADRTASIETLMNHLQETALNHVKTAGLLGDG 180
           LID FGLGRIVQDGLVFRQNFSIRSYEIGADRTASIETLMNHLQETALNHVKTAGLLGDG
Sbjct: 121 LIDPFGLGRIVQDGLVFRQNFSIRSYEIGADRTASIETLMNHLQETALNHVKTAGLLGDG 180

Query: 181 FGSTPEMCKKNLIWVVAKMQVVVDRYPTWGDVVQVDTWVGASGKNGMRRDWLVRDCKTGE 240
           FGSTPEMCKKNLIWVVAKMQVVVDRYPTWGDVVQVDTWV ASGKNGMRRDWLVRDCKTGE
Sbjct: 181 FGSTPEMCKKNLIWVVAKMQVVVDRYPTWGDVVQVDTWVCASGKNGMRRDWLVRDCKTGE 240

Query: 241 TLTRASSVWVMMNKQTRKLSKIPGEVRGEIEPYFANSPPIVEEDGRKLTKLDDDSADYIR 300
           TLTRASSVWVMMNKQTRKLSKIPGEVRGEIEPYFA+SPPIVEEDGRKL+KLDDD+ADYIR
Sbjct: 241 TLTRASSVWVMMNKQTRKLSKIPGEVRGEIEPYFADSPPIVEEDGRKLSKLDDDTADYIR 300

Query: 301 TGLTPRWSDLDVNQHVNNVKYIGWVLESAPLPILESHELSTMTLEYRRECGRDSVLQSLT 360
           TGLTPRWSDLD+NQHVNNVKYIGW+LESAPLPILESHELSTMTLEYRRECGRDSVLQSLT
Sbjct: 301 TGLTPRWSDLDINQHVNNVKYIGWILESAPLPILESHELSTMTLEYRRECGRDSVLQSLT 360

Query: 361 AVSSAGISNLADAGDIECHHLLRLENGAEIVRGRTEWRPKHATNFGMVGQIPAGNT 416
           AVS AGISNLADAGDIEC HLLRLENGAEIVRGRTEWRPKHATNFG+VGQIPAG+T
Sbjct: 361 AVSGAGISNLADAGDIECQHLLRLENGAEIVRGRTEWRPKHATNFGLVGQIPAGDT 416

[Close]

BLAST of Carg12175-RA vs. ExPASy Swiss-Prot
Match: Q9SQI3 (Palmitoyl-acyl carrier protein thioesterase, chloroplastic OS=Gossypium hirsutum OX=3635 GN=FATB1 PE=1 SV=1)

HSP 1 Score: 624.4 bits (1609), Expect = 9.2e-178
Identity = 308/415 (74.22%), Postives = 346/415 (83.37%), Query Frame = 0


Query: 1   MVATAATSAFFPAISLSSDAGSKSTKFGSGSVNPGGSRPKSSSRGLQVKANAQAPSKING 60
           MVATA TSAFFP  S    + SK+ K GS       S+P  SS  LQVKANAQAP KING
Sbjct: 1   MVATAVTSAFFPVTSSPDSSDSKNKKLGSIK-----SKPSVSSGSLQVKANAQAPPKING 60

Query: 61  T---SVGLEGVKLDDDLTSPPPRTFINVLPDWSMLLAAITTIFLAAEKQWMMLDWKPRRP 120
           T   +  +EG K DD  +SPPPRTFIN LPDWSMLLAAITTIFLAAEKQWMMLDWKPRRP
Sbjct: 61  TVASTTPVEGSKNDDGASSPPPRTFINQLPDWSMLLAAITTIFLAAEKQWMMLDWKPRRP 120

Query: 121 DMLIDSFGLGRIVQDGLVFRQNFSIRSYEIGADRTASIETLMNHLQETALNHVKTAGLLG 180
           DM+ID FG+G+IVQDGLVF QNFSIRSYEIGAD+TASIETLMNHLQETA+NH ++AGLLG
Sbjct: 121 DMVIDPFGIGKIVQDGLVFSQNFSIRSYEIGADQTASIETLMNHLQETAINHCRSAGLLG 180

Query: 181 DGFGSTPEMCKKNLIWVVAKMQVVVDRYPTWGDVVQVDTWVGASGKNGMRRDWLVRDCKT 240
           +GFG+TPEMCKKNLIWVV +MQVVVDRYPTWGDVVQVDTWV ASGKNGMRRDWLV + +T
Sbjct: 181 EGFGATPEMCKKNLIWVVTRMQVVVDRYPTWGDVVQVDTWVSASGKNGMRRDWLVSNSET 240

Query: 241 GETLTRASSVWVMMNKQTRKLSKIPGEVRGEIEPYFANSPPIVEEDGRKLTKLDDDSADY 300
           GE LTRA+SVWVMMNK TR+LSKIP EVRGEIEP+F NS P++ ED +KL KLDD +A++
Sbjct: 241 GEILTRATSVWVMMNKLTRRLSKIPEEVRGEIEPFFMNSDPVLAEDSQKLVKLDDSTAEH 300

Query: 301 IRTGLTPRWSDLDVNQHVNNVKYIGWVLESAPLPILESHELSTMTLEYRRECGRDSVLQS 360
           +  GLTP+WSDLDVNQHVNNVKYIGW+LESAPLPILESHELS +TLEYRRECGRDSVLQS
Sbjct: 301 VCKGLTPKWSDLDVNQHVNNVKYIGWILESAPLPILESHELSALTLEYRRECGRDSVLQS 360

Query: 361 LTAVSSAGISNLADAGDIECHHLLRLENGAEIVRGRTEWRPKHATNFGMVGQIPA 413
           LT VS +   N  + G+  C HLLRL++GAEIVRGRT WRPKHA +   + QI A
Sbjct: 361 LTTVSDSNTENAVNVGEFNCQHLLRLDDGAEIVRGRTRWRPKHAKSSANMDQITA 410

[Close]

BLAST of Carg12175-RA vs. ExPASy Swiss-Prot
Match: Q9SJE2 (Palmitoyl-acyl carrier protein thioesterase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FATB PE=1 SV=1)

HSP 1 Score: 622.1 bits (1603), Expect = 4.6e-177
Identity = 310/407 (76.17%), Postives = 342/407 (84.03%), Query Frame = 0


Query: 1   MVATAATSAFFPAISLSSDAGSKSTKFGSGSVNPGGSRPKSSSRGLQVKANAQAPSKING 60
           MVAT+ATS+FFP  S S D   K  K   GS N  G     +S  ++VK NAQAP KING
Sbjct: 1   MVATSATSSFFPVPSSSLDPNGKGNKI--GSTNLAGLNSAPNSGRMKVKPNAQAPPKING 60

Query: 61  TSVGLEG----VKLDDDLTS-PPPRTFINVLPDWSMLLAAITTIFLAAEKQWMMLDWKPR 120
             VGL G    V+ D + +S P PRTFIN LPDWSMLLAAITTIFLAAEKQWMMLDWKPR
Sbjct: 61  KKVGLPGSVDIVRTDTETSSHPAPRTFINQLPDWSMLLAAITTIFLAAEKQWMMLDWKPR 120

Query: 121 RPDMLIDSFGLGRIVQDGLVFRQNFSIRSYEIGADRTASIETLMNHLQETALNHVKTAGL 180
           R DML+D FG+GRIVQDGLVFRQNFSIRSYEIGADR+ASIET+MNHLQETALNHVKTAGL
Sbjct: 121 RSDMLVDPFGIGRIVQDGLVFRQNFSIRSYEIGADRSASIETVMNHLQETALNHVKTAGL 180

Query: 181 LGDGFGSTPEMCKKNLIWVVAKMQVVVDRYPTWGDVVQVDTWVGASGKNGMRRDWLVRDC 240
           LGDGFGSTPEM KKNLIWVV +MQVVVD+YPTWGDVV+VDTWV  SGKNGMRRDWLVRDC
Sbjct: 181 LGDGFGSTPEMFKKNLIWVVTRMQVVVDKYPTWGDVVEVDTWVSQSGKNGMRRDWLVRDC 240

Query: 241 KTGETLTRASSVWVMMNKQTRKLSKIPGEVRGEIEPYFANSPPIVEEDGRKLTKLDDDSA 300
            TGETLTRASSVWVMMNK TR+LSKIP EVRGEIEPYF NS P++ ED RKLTK+DD +A
Sbjct: 241 NTGETLTRASSVWVMMNKLTRRLSKIPEEVRGEIEPYFVNSDPVLAEDSRKLTKIDDKTA 300

Query: 301 DYIRTGLTPRWSDLDVNQHVNNVKYIGWVLESAPLPILESHELSTMTLEYRRECGRDSVL 360
           DY+R+GLTPRWSDLDVNQHVNNVKYIGW+LESAP+ I+E  +L +MTLEYRRECGRDSVL
Sbjct: 301 DYVRSGLTPRWSDLDVNQHVNNVKYIGWILESAPVGIMERQKLKSMTLEYRRECGRDSVL 360

Query: 361 QSLTAVSSAGISNLADAGDIECHHLLRLENGAEIVRGRTEWRPKHAT 403
           QSLTAV+   I NLA AGD+EC HLLRL++GAE+VRGRTEW  K  T
Sbjct: 361 QSLTAVTGCDIGNLATAGDVECQHLLRLQDGAEVVRGRTEWSSKTPT 405

[Close]

BLAST of Carg12175-RA vs. ExPASy Swiss-Prot
Match: Q39513 (Palmitoyl-acyl carrier protein thioesterase, chloroplastic OS=Cuphea hookeriana OX=36775 GN=FATB1 PE=2 SV=1)

HSP 1 Score: 572.8 bits (1475), Expect = 3.2e-162
Identity = 288/411 (70.07%), Postives = 338/411 (82.24%), Query Frame = 0


Query: 1   MVATAATSAFFPAISLSSDAGSKSTKFGSGSVNPGGSRPKSS-SRGLQVKANAQAPSKIN 60
           MVATAA+SAFFP    S+D  S+  K G+   +    +PKS+ + GLQVKANA AP KIN
Sbjct: 1   MVATAASSAFFPL--PSADTSSRPGKLGNKPSSLSPLKPKSTPNGGLQVKANASAPPKIN 60

Query: 61  GTSVGLE--GVKLDDDL-TSPPPRTFINVLPDWSMLLAAITTIFLAAEKQWMMLDWKPRR 120
           G+ VGL+  G+K  +D  ++PPPRTFIN LPDWSMLLAAITT+FLAAEKQWMMLDWKP+R
Sbjct: 61  GSPVGLKSGGLKTQEDAHSAPPPRTFINQLPDWSMLLAAITTVFLAAEKQWMMLDWKPKR 120

Query: 121 PDMLIDSFGLGRIVQDGLVFRQNFSIRSYEIGADRTASIETLMNHLQETALNHVKTAGLL 180
           PDML+D FGLG IVQDGLVFRQNFSIRSYEIGADRTASIET+MNHLQETALNHVK AGL 
Sbjct: 121 PDMLVDPFGLGSIVQDGLVFRQNFSIRSYEIGADRTASIETVMNHLQETALNHVKIAGLS 180

Query: 181 GDGFGSTPEMCKKNLIWVVAKMQVVVDRYPTWGDVVQVDTWVGASGKNGMRRDWLVRDCK 240
            DGFG TPEM K++LIWVVAKMQV+V+RYPTWGD V+V+TWV  SGKNGMRRDWL+ DC 
Sbjct: 181 NDGFGRTPEMYKRDLIWVVAKMQVMVNRYPTWGDTVEVNTWVAKSGKNGMRRDWLISDCN 240

Query: 241 TGETLTRASSVWVMMNKQTRKLSKIPGEVRGEIEPYFANSPPIVEEDGRKLTKLDDDSAD 300
           TGE LTRASSVWVMMN++TR+LSKIP EVR EIEP+F +SPP++E+D RKL KLD+ +AD
Sbjct: 241 TGEILTRASSVWVMMNQKTRRLSKIPDEVRNEIEPHFVDSPPVIEDDDRKLPKLDEKTAD 300

Query: 301 YIRTGLTPRWSDLDVNQHVNNVKYIGWVLESAPLPILESHELSTMTLEYRRECGRDSVLQ 360
            IR GLTPRW+DLDVNQHVNNVKYIGW+LES P  +LE+ EL ++TLEYRRECGR+SVL+
Sbjct: 301 SIRKGLTPRWNDLDVNQHVNNVKYIGWILESTPPEVLETQELCSLTLEYRRECGRESVLE 360

Query: 361 SLTAVSSAGISNLADAGDIECHHLLRLENGAEIVRGRTEWRPKHATNFGMV 408
           SLTA+  +G          +  HLLRLE+G EIV+GRTEWRPK+    G+V
Sbjct: 361 SLTAMDPSG-----GGYGSQFQHLLRLEDGGEIVKGRTEWRPKNGVINGVV 404

[Close]

BLAST of Carg12175-RA vs. ExPASy Swiss-Prot
Match: G3ESV0 (Acyl-[acyl-carrier-protein] hydrolase FATB2, chloroplastic (Fragment) OS=Cuphea viscosissima OX=857185 GN=FATB2 PE=1 SV=1)

HSP 1 Score: 564.3 bits (1453), Expect = 1.1e-159
Identity = 290/413 (70.22%), Postives = 336/413 (81.36%), Query Frame = 0


Query: 4   TAATSAFFPAISLSSDAGSKSTKFGSGSVNPGGSRPKS-SSRGLQVKANAQAPSKINGTS 63
           TAA+SAFFP    S+D  S+  K G+G  +    +PKS  + GLQVKA+A AP KING+S
Sbjct: 1   TAASSAFFPV--PSADTSSRPGKLGNGPSSFSPLKPKSIPNGGLQVKASASAPPKINGSS 60

Query: 64  VGLE--GVKLDDDLTS-PPPRTFINVLPDWSMLLAAITTIFLAAEKQWMMLDWKPRRPDM 123
           VGL+  G+K  DD  S PPPRTFIN LPDWSMLLAAITT FLAAEKQWMMLD KP+R DM
Sbjct: 61  VGLKSGGLKTHDDAPSAPPPRTFINQLPDWSMLLAAITTAFLAAEKQWMMLDRKPKRLDM 120

Query: 124 LIDSFGLGRIVQDGLVFRQNFSIRSYEIGADRTASIETLMNHLQETALNHVKTAGLLGDG 183
           L D FGLGR+VQDGLVFRQNFSIRSYEIGADRTASIET+MNHLQETALNHVKTAGL  DG
Sbjct: 121 LEDPFGLGRVVQDGLVFRQNFSIRSYEIGADRTASIETVMNHLQETALNHVKTAGLSNDG 180

Query: 184 FGSTPEMCKKNLIWVVAKMQVVVDRYPTWGDVVQVDTWVGASGKNGMRRDWLVRDCKTGE 243
           FG TPEM K++LIWVVAKMQV+V+RYPTWGD V+V+TWV  SGKNGMRRDWL+ DC TGE
Sbjct: 181 FGRTPEMYKRDLIWVVAKMQVMVNRYPTWGDTVEVNTWVAKSGKNGMRRDWLISDCNTGE 240

Query: 244 TLTRASSVWVMMNKQTRKLSKIPGEVRGEIEPYFANSPPIVEEDGRKLTKLDDDSADYIR 303
            LTRASSVWVMMN++TRKLSKIP EVR EIEP+F +S P++E+D RKL KLD+ SAD IR
Sbjct: 241 ILTRASSVWVMMNQKTRKLSKIPDEVRREIEPHFVDSAPVIEDDDRKLPKLDEKSADSIR 300

Query: 304 TGLTPRWSDLDVNQHVNNVKYIGWVLESAPLPILESHELSTMTLEYRRECGRDSVLQSLT 363
            GLTPRW+DLDVNQHVNN KYIGW+LES P  +LE+ EL ++TLEYRRECGR+SVL+SLT
Sbjct: 301 KGLTPRWNDLDVNQHVNNAKYIGWILESTPPEVLETQELCSLTLEYRRECGRESVLESLT 360

Query: 364 AVSSAGISNLADAGDIECHHLLRLENGAEIVRGRTEWRPKHATNFGMVGQIPA 413
           AV  +G     +    +  HLLRLE+G EIV+GRTEWRPK+A   G+ G +P+
Sbjct: 361 AVDPSG-----EGYGSQFQHLLRLEDGGEIVKGRTEWRPKNA---GINGVVPS 403

[Close]

BLAST of Carg12175-RA vs. ExPASy Swiss-Prot
Match: G3ESU9 (Acyl-[acyl-carrier-protein] hydrolase FATB1, chloroplastic OS=Cuphea viscosissima OX=857185 GN=FATB1 PE=1 SV=1)

HSP 1 Score: 481.5 bits (1238), Expect = 9.7e-135
Identity = 238/410 (58.05%), Postives = 301/410 (73.41%), Query Frame = 0


Query: 1   MVATAATSAFFPAISLSSDAGSKSTKFGSGSVNPGGSRPKSSSRGLQVKANAQAPSKING 60
           MVA AATSAFFP  +  +      +     S++P        + G QVKANA A  K NG
Sbjct: 1   MVAAAATSAFFPVPAPGTSPKPGKSGNWPSSLSPTFKPKSIPNGGFQVKANASAHPKANG 60

Query: 61  TSVGLEGVKL---DDDLTSPPPRTFINVLPDWSMLLAAITTIFLAAEKQWMMLDWKPRRP 120
           ++V L+   L   +D  +SPPPR F+N LPDWSMLL AITT+F+AAEKQW MLD K +RP
Sbjct: 61  SAVNLKSGSLNTQEDTSSSPPPRAFLNQLPDWSMLLTAITTVFVAAEKQWTMLDRKSKRP 120

Query: 121 DMLIDSFGLGRIVQDGLVFRQNFSIRSYEIGADRTASIETLMNHLQETALNHVKTAGLLG 180
           DML+DS GL  IV+DGLV R +FSIRSYEIGADRTASIETLMNHLQET +NH K+ GL  
Sbjct: 121 DMLVDSVGLKSIVRDGLVSRHSFSIRSYEIGADRTASIETLMNHLQETTINHCKSLGLHN 180

Query: 181 DGFGSTPEMCKKNLIWVVAKMQVVVDRYPTWGDVVQVDTWVGASGKNGMRRDWLVRDCKT 240
           DGFG TP MCK +LIWV+ KMQ++V+RYPTWGD V+++TW   SGK GM  DWL+ DC T
Sbjct: 181 DGFGRTPGMCKNDLIWVLTKMQIMVNRYPTWGDTVEINTWFSQSGKIGMASDWLISDCNT 240

Query: 241 GETLTRASSVWVMMNKQTRKLSKIPGEVRGEIEPYFANSPPIVEEDGRKLTKLDDDSADY 300
           GE L RA+SVW MMN++TR+ S++P EVR E+ P+F +SP ++E++ +KL K D  + D 
Sbjct: 241 GEILIRATSVWAMMNQKTRRFSRLPYEVRQELTPHFVDSPHVIEDNDQKLRKFDVKTGDS 300

Query: 301 IRTGLTPRWSDLDVNQHVNNVKYIGWVLESAPLPILESHELSTMTLEYRRECGRDSVLQS 360
           IR GLTPRW+DLDVNQHV+NVKYIGW+LES P+ +LE+ EL ++T+EYRRECG DSVL+S
Sbjct: 301 IRKGLTPRWNDLDVNQHVSNVKYIGWILESMPIEVLETQELCSLTVEYRRECGMDSVLES 360

Query: 361 LTAVSSAGISNLADAGDIECHHLLRLENGAEIVRGRTEWRPKHATNFGMV 408
           +TAV  +      + G  +  HLLRLE+G +IV+ RTEWRPK+A   G +
Sbjct: 361 VTAVDPS-----ENGGRSQYKHLLRLEDGTDIVKSRTEWRPKNAGTNGAI 405

[Close]

BLAST of Carg12175-RA vs. ExPASy TrEMBL
Match: A0A6J1F013 (Acyl-[acyl-carrier-protein] hydrolase OS=Cucurbita moschata OX=3662 GN=LOC111440932 PE=3 SV=1)

HSP 1 Score: 837.0 bits (2161), Expect = 3.4e-239
Identity = 414/415 (99.76%), Postives = 414/415 (99.76%), Query Frame = 0


Query: 1   MVATAATSAFFPAISLSSDAGSKSTKFGSGSVNPGGSRPKSSSRGLQVKANAQAPSKING 60
           MVATAATSAFFPAISLSSDAGSKSTKFGSGSVNPGGSRPKSSSRGLQVKANAQAPSKING
Sbjct: 1   MVATAATSAFFPAISLSSDAGSKSTKFGSGSVNPGGSRPKSSSRGLQVKANAQAPSKING 60

Query: 61  TSVGLEGVKLDDDLTSPPPRTFINVLPDWSMLLAAITTIFLAAEKQWMMLDWKPRRPDML 120
           TSVGLEGVKLDDDLTSPPPRTFINVLPDWSMLLAAITTIFLAAEKQWMMLDWKPRRPDML
Sbjct: 61  TSVGLEGVKLDDDLTSPPPRTFINVLPDWSMLLAAITTIFLAAEKQWMMLDWKPRRPDML 120

Query: 121 IDSFGLGRIVQDGLVFRQNFSIRSYEIGADRTASIETLMNHLQETALNHVKTAGLLGDGF 180
           IDSFGLGRIVQDGLVFRQNFSIRSYEIGADRTASIETLMNHLQETALNHVKTAGLLGDGF
Sbjct: 121 IDSFGLGRIVQDGLVFRQNFSIRSYEIGADRTASIETLMNHLQETALNHVKTAGLLGDGF 180

Query: 181 GSTPEMCKKNLIWVVAKMQVVVDRYPTWGDVVQVDTWVGASGKNGMRRDWLVRDCKTGET 240
           GSTPEMCKKNLIWVVAKMQVVVDRYPTWGDVVQVDTWVGASGKNGMRRDWLVRDCKTGET
Sbjct: 181 GSTPEMCKKNLIWVVAKMQVVVDRYPTWGDVVQVDTWVGASGKNGMRRDWLVRDCKTGET 240

Query: 241 LTRASSVWVMMNKQTRKLSKIPGEVRGEIEPYFANSPPIVEEDGRKLTKLDDDSADYIRT 300
           LTRASSVWVMMNKQTRKLSKIPGEVRGEIEPYFANSPPIVEEDGRKLTKLDDDSADYIRT
Sbjct: 241 LTRASSVWVMMNKQTRKLSKIPGEVRGEIEPYFANSPPIVEEDGRKLTKLDDDSADYIRT 300

Query: 301 GLTPRWSDLDVNQHVNNVKYIGWVLESAPLPILESHELSTMTLEYRRECGRDSVLQSLTA 360
           GLTPRWSDLDVNQHVNNVKYIGWVLESAPLPILESHELSTMTLEYRRECGRDSVLQSLTA
Sbjct: 301 GLTPRWSDLDVNQHVNNVKYIGWVLESAPLPILESHELSTMTLEYRRECGRDSVLQSLTA 360

Query: 361 VSSAGISNLADAGDIECHHLLRLENGAEIVRGRTEWRPKHATNFGMVGQIPAGNT 416
           VS AGISNLADAGDIECHHLLRLENGAEIVRGRTEWRPKHATNFGMVGQIPAGNT
Sbjct: 361 VSGAGISNLADAGDIECHHLLRLENGAEIVRGRTEWRPKHATNFGMVGQIPAGNT 415

[Close]

BLAST of Carg12175-RA vs. ExPASy TrEMBL
Match: A0A5A7TJ86 (Acyl-[acyl-carrier-protein] hydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold588G00050 PE=3 SV=1)

HSP 1 Score: 797.7 bits (2059), Expect = 2.3e-227
Identity = 394/416 (94.71%), Postives = 405/416 (97.36%), Query Frame = 0


Query: 1   MVATAATSAFFPAISLSSDAGSKSTKFGSGSVNPGGSRPKSSSRGLQVKANAQAPSKING 60
           MVATAATSAFFPAIS SSD+G+ STKFGSGSVNPGGSRPKSSSRGLQVKA+AQAP KING
Sbjct: 1   MVATAATSAFFPAISPSSDSGAGSTKFGSGSVNPGGSRPKSSSRGLQVKASAQAPPKING 60

Query: 61  TSVGLEGVKLDDDL-TSPPPRTFINVLPDWSMLLAAITTIFLAAEKQWMMLDWKPRRPDM 120
           TSVG+EGVK DDDL TSPPPRTFIN+LPDWSMLLAAITTIFLAAEKQWMMLDWKPRRPDM
Sbjct: 61  TSVGIEGVKFDDDLTTSPPPRTFINLLPDWSMLLAAITTIFLAAEKQWMMLDWKPRRPDM 120

Query: 121 LIDSFGLGRIVQDGLVFRQNFSIRSYEIGADRTASIETLMNHLQETALNHVKTAGLLGDG 180
           LID FGLGRIVQDGLVFRQNFSIRSYEIGADRTASIETLMNHLQETALNHVKTAGLLGDG
Sbjct: 121 LIDPFGLGRIVQDGLVFRQNFSIRSYEIGADRTASIETLMNHLQETALNHVKTAGLLGDG 180

Query: 181 FGSTPEMCKKNLIWVVAKMQVVVDRYPTWGDVVQVDTWVGASGKNGMRRDWLVRDCKTGE 240
           FGSTPEMCKKNLIWVVAKMQVVVDRYPTWGDVVQVDTWV ASGKNGMRRDWLVRDCKTGE
Sbjct: 181 FGSTPEMCKKNLIWVVAKMQVVVDRYPTWGDVVQVDTWVCASGKNGMRRDWLVRDCKTGE 240

Query: 241 TLTRASSVWVMMNKQTRKLSKIPGEVRGEIEPYFANSPPIVEEDGRKLTKLDDDSADYIR 300
           TLTRASSVWVMMNKQTRKLSKIPGEVRGEIEPYFA+SPPIVEEDGRKL KLDDDSADYIR
Sbjct: 241 TLTRASSVWVMMNKQTRKLSKIPGEVRGEIEPYFADSPPIVEEDGRKLPKLDDDSADYIR 300

Query: 301 TGLTPRWSDLDVNQHVNNVKYIGWVLESAPLPILESHELSTMTLEYRRECGRDSVLQSLT 360
           TGLTPRWSDLD+NQHVNNVKYIGW+LESAPLPILESHELSTMTLEYRRECGRDSVLQSLT
Sbjct: 301 TGLTPRWSDLDINQHVNNVKYIGWILESAPLPILESHELSTMTLEYRRECGRDSVLQSLT 360

Query: 361 AVSSAGISNLADAGDIECHHLLRLENGAEIVRGRTEWRPKHATNFGMVGQIPAGNT 416
           AVS AGI+NLADAGDIEC HLLRL+NGAEIVRGRTEWRPKHATNFGM+ QIPAGNT
Sbjct: 361 AVSGAGITNLADAGDIECQHLLRLDNGAEIVRGRTEWRPKHATNFGMLDQIPAGNT 416

[Close]

BLAST of Carg12175-RA vs. ExPASy TrEMBL
Match: A0A1S3CJ27 (Acyl-[acyl-carrier-protein] hydrolase OS=Cucumis melo OX=3656 GN=LOC103501532 PE=3 SV=1)

HSP 1 Score: 797.7 bits (2059), Expect = 2.3e-227
Identity = 394/416 (94.71%), Postives = 405/416 (97.36%), Query Frame = 0


Query: 1   MVATAATSAFFPAISLSSDAGSKSTKFGSGSVNPGGSRPKSSSRGLQVKANAQAPSKING 60
           MVATAATSAFFPAIS SSD+G+ STKFGSGSVNPGGSRPKSSSRGLQVKA+AQAP KING
Sbjct: 1   MVATAATSAFFPAISPSSDSGAGSTKFGSGSVNPGGSRPKSSSRGLQVKASAQAPPKING 60

Query: 61  TSVGLEGVKLDDDL-TSPPPRTFINVLPDWSMLLAAITTIFLAAEKQWMMLDWKPRRPDM 120
           TSVG+EGVK DDDL TSPPPRTFIN+LPDWSMLLAAITTIFLAAEKQWMMLDWKPRRPDM
Sbjct: 61  TSVGIEGVKFDDDLTTSPPPRTFINLLPDWSMLLAAITTIFLAAEKQWMMLDWKPRRPDM 120

Query: 121 LIDSFGLGRIVQDGLVFRQNFSIRSYEIGADRTASIETLMNHLQETALNHVKTAGLLGDG 180
           LID FGLGRIVQDGLVFRQNFSIRSYEIGADRTASIETLMNHLQETALNHVKTAGLLGDG
Sbjct: 121 LIDPFGLGRIVQDGLVFRQNFSIRSYEIGADRTASIETLMNHLQETALNHVKTAGLLGDG 180

Query: 181 FGSTPEMCKKNLIWVVAKMQVVVDRYPTWGDVVQVDTWVGASGKNGMRRDWLVRDCKTGE 240
           FGSTPEMCKKNLIWVVAKMQVVVDRYPTWGDVVQVDTWV ASGKNGMRRDWLVRDCKTGE
Sbjct: 181 FGSTPEMCKKNLIWVVAKMQVVVDRYPTWGDVVQVDTWVCASGKNGMRRDWLVRDCKTGE 240

Query: 241 TLTRASSVWVMMNKQTRKLSKIPGEVRGEIEPYFANSPPIVEEDGRKLTKLDDDSADYIR 300
           TLTRASSVWVMMNKQTRKLSKIPGEVRGEIEPYFA+SPPIVEEDGRKL KLDDDSADYIR
Sbjct: 241 TLTRASSVWVMMNKQTRKLSKIPGEVRGEIEPYFADSPPIVEEDGRKLPKLDDDSADYIR 300

Query: 301 TGLTPRWSDLDVNQHVNNVKYIGWVLESAPLPILESHELSTMTLEYRRECGRDSVLQSLT 360
           TGLTPRWSDLD+NQHVNNVKYIGW+LESAPLPILESHELSTMTLEYRRECGRDSVLQSLT
Sbjct: 301 TGLTPRWSDLDINQHVNNVKYIGWILESAPLPILESHELSTMTLEYRRECGRDSVLQSLT 360

Query: 361 AVSSAGISNLADAGDIECHHLLRLENGAEIVRGRTEWRPKHATNFGMVGQIPAGNT 416
           AVS AGI+NLADAGDIEC HLLRL+NGAEIVRGRTEWRPKHATNFGM+ QIPAGNT
Sbjct: 361 AVSGAGITNLADAGDIECQHLLRLDNGAEIVRGRTEWRPKHATNFGMLDQIPAGNT 416

[Close]

BLAST of Carg12175-RA vs. ExPASy TrEMBL
Match: A0A5D3BJS2 (Acyl-[acyl-carrier-protein] hydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold596G00190 PE=3 SV=1)

HSP 1 Score: 796.6 bits (2056), Expect = 5.0e-227
Identity = 393/416 (94.47%), Postives = 405/416 (97.36%), Query Frame = 0


Query: 1   MVATAATSAFFPAISLSSDAGSKSTKFGSGSVNPGGSRPKSSSRGLQVKANAQAPSKING 60
           MVATAATSAFFPAIS SSD+G+ STKFGSGSVNPGGSRP+SSSRGLQVKA+AQAP KING
Sbjct: 1   MVATAATSAFFPAISPSSDSGAGSTKFGSGSVNPGGSRPRSSSRGLQVKASAQAPPKING 60

Query: 61  TSVGLEGVKLDDDL-TSPPPRTFINVLPDWSMLLAAITTIFLAAEKQWMMLDWKPRRPDM 120
           TSVG+EGVK DDDL TSPPPRTFIN+LPDWSMLLAAITTIFLAAEKQWMMLDWKPRRPDM
Sbjct: 61  TSVGIEGVKFDDDLTTSPPPRTFINLLPDWSMLLAAITTIFLAAEKQWMMLDWKPRRPDM 120

Query: 121 LIDSFGLGRIVQDGLVFRQNFSIRSYEIGADRTASIETLMNHLQETALNHVKTAGLLGDG 180
           LID FGLGRIVQDGLVFRQNFSIRSYEIGADRTASIETLMNHLQETALNHVKTAGLLGDG
Sbjct: 121 LIDPFGLGRIVQDGLVFRQNFSIRSYEIGADRTASIETLMNHLQETALNHVKTAGLLGDG 180

Query: 181 FGSTPEMCKKNLIWVVAKMQVVVDRYPTWGDVVQVDTWVGASGKNGMRRDWLVRDCKTGE 240
           FGSTPEMCKKNLIWVVAKMQVVVDRYPTWGDVVQVDTWV ASGKNGMRRDWLVRDCKTGE
Sbjct: 181 FGSTPEMCKKNLIWVVAKMQVVVDRYPTWGDVVQVDTWVCASGKNGMRRDWLVRDCKTGE 240

Query: 241 TLTRASSVWVMMNKQTRKLSKIPGEVRGEIEPYFANSPPIVEEDGRKLTKLDDDSADYIR 300
           TLTRASSVWVMMNKQTRKLSKIPGEVRGEIEPYFA+SPPIVEEDGRKL KLDDDSADYIR
Sbjct: 241 TLTRASSVWVMMNKQTRKLSKIPGEVRGEIEPYFADSPPIVEEDGRKLPKLDDDSADYIR 300

Query: 301 TGLTPRWSDLDVNQHVNNVKYIGWVLESAPLPILESHELSTMTLEYRRECGRDSVLQSLT 360
           TGLTPRWSDLD+NQHVNNVKYIGW+LESAPLPILESHELSTMTLEYRRECGRDSVLQSLT
Sbjct: 301 TGLTPRWSDLDINQHVNNVKYIGWILESAPLPILESHELSTMTLEYRRECGRDSVLQSLT 360

Query: 361 AVSSAGISNLADAGDIECHHLLRLENGAEIVRGRTEWRPKHATNFGMVGQIPAGNT 416
           AVS AGI+NLADAGDIEC HLLRL+NGAEIVRGRTEWRPKHATNFGM+ QIPAGNT
Sbjct: 361 AVSGAGITNLADAGDIECQHLLRLDNGAEIVRGRTEWRPKHATNFGMLDQIPAGNT 416

[Close]

BLAST of Carg12175-RA vs. ExPASy TrEMBL
Match: A0A0A0LWZ2 (Acyl-[acyl-carrier-protein] hydrolase OS=Cucumis sativus OX=3659 GN=Csa_1G397120 PE=3 SV=1)

HSP 1 Score: 795.0 bits (2052), Expect = 1.5e-226
Identity = 394/415 (94.94%), Postives = 402/415 (96.87%), Query Frame = 0


Query: 1   MVATAATSAFFPAISLSSDAGSKSTKFGSGSVNPGGSRPKSSSRGLQVKANAQAPSKING 60
           MVATAATSAFFPAIS SSD+G+ STKFGSGSVNPG SRPKSSSRGL VKANAQAP KING
Sbjct: 1   MVATAATSAFFPAISPSSDSGAGSTKFGSGSVNPGRSRPKSSSRGLLVKANAQAPPKING 60

Query: 61  TSVGLEGVKLDDDL-TSPPPRTFINVLPDWSMLLAAITTIFLAAEKQWMMLDWKPRRPDM 120
           TSVG+EGVK DDDL TSPPPRTFIN+LPDWSMLLAAITTIFLAAEKQWMMLDWKPRRPDM
Sbjct: 61  TSVGIEGVKFDDDLTTSPPPRTFINLLPDWSMLLAAITTIFLAAEKQWMMLDWKPRRPDM 120

Query: 121 LIDSFGLGRIVQDGLVFRQNFSIRSYEIGADRTASIETLMNHLQETALNHVKTAGLLGDG 180
           LID FGLGRIVQDGLVFRQNFSIRSYEIGADRTASIETLMNHLQETALNHVKTAGLLGDG
Sbjct: 121 LIDPFGLGRIVQDGLVFRQNFSIRSYEIGADRTASIETLMNHLQETALNHVKTAGLLGDG 180

Query: 181 FGSTPEMCKKNLIWVVAKMQVVVDRYPTWGDVVQVDTWVGASGKNGMRRDWLVRDCKTGE 240
           FGSTPEMCKKNLIWVVAKMQVVVDRYPTWGDVVQVDTWV ASGKNGMRRDWLVRDCKTGE
Sbjct: 181 FGSTPEMCKKNLIWVVAKMQVVVDRYPTWGDVVQVDTWVCASGKNGMRRDWLVRDCKTGE 240

Query: 241 TLTRASSVWVMMNKQTRKLSKIPGEVRGEIEPYFANSPPIVEEDGRKLTKLDDDSADYIR 300
           TLTRASSVWVMMNKQTRKLSKIPGEVRGEIEPYFANSPPIVEEDGRKL KLDDDSADYIR
Sbjct: 241 TLTRASSVWVMMNKQTRKLSKIPGEVRGEIEPYFANSPPIVEEDGRKLPKLDDDSADYIR 300

Query: 301 TGLTPRWSDLDVNQHVNNVKYIGWVLESAPLPILESHELSTMTLEYRRECGRDSVLQSLT 360
           TGLTPRWSDLD+NQHVNNVKYIGW+LESAPLPILESHELSTMTLEYRRECGRDSVLQSLT
Sbjct: 301 TGLTPRWSDLDINQHVNNVKYIGWILESAPLPILESHELSTMTLEYRRECGRDSVLQSLT 360

Query: 361 AVSSAGISNLADAGDIECHHLLRLENGAEIVRGRTEWRPKHATNFGMVGQIPAGN 415
           AVS AGI+NLADAGDIEC HLLRLENGAEIVRGRTEWRPKHATNFGM+ QIPAGN
Sbjct: 361 AVSGAGITNLADAGDIECQHLLRLENGAEIVRGRTEWRPKHATNFGMLDQIPAGN 415

[Close]

BLAST of Carg12175-RA vs. TAIR 10
Match: AT1G08510.1 (fatty acyl-ACP thioesterases B )

HSP 1 Score: 622.1 bits (1603), Expect = 3.3e-178
Identity = 310/407 (76.17%), Postives = 342/407 (84.03%), Query Frame = 0


Query: 1   MVATAATSAFFPAISLSSDAGSKSTKFGSGSVNPGGSRPKSSSRGLQVKANAQAPSKING 60
           MVAT+ATS+FFP  S S D   K  K   GS N  G     +S  ++VK NAQAP KING
Sbjct: 1   MVATSATSSFFPVPSSSLDPNGKGNKI--GSTNLAGLNSAPNSGRMKVKPNAQAPPKING 60

Query: 61  TSVGLEG----VKLDDDLTS-PPPRTFINVLPDWSMLLAAITTIFLAAEKQWMMLDWKPR 120
             VGL G    V+ D + +S P PRTFIN LPDWSMLLAAITTIFLAAEKQWMMLDWKPR
Sbjct: 61  KKVGLPGSVDIVRTDTETSSHPAPRTFINQLPDWSMLLAAITTIFLAAEKQWMMLDWKPR 120

Query: 121 RPDMLIDSFGLGRIVQDGLVFRQNFSIRSYEIGADRTASIETLMNHLQETALNHVKTAGL 180
           R DML+D FG+GRIVQDGLVFRQNFSIRSYEIGADR+ASIET+MNHLQETALNHVKTAGL
Sbjct: 121 RSDMLVDPFGIGRIVQDGLVFRQNFSIRSYEIGADRSASIETVMNHLQETALNHVKTAGL 180

Query: 181 LGDGFGSTPEMCKKNLIWVVAKMQVVVDRYPTWGDVVQVDTWVGASGKNGMRRDWLVRDC 240
           LGDGFGSTPEM KKNLIWVV +MQVVVD+YPTWGDVV+VDTWV  SGKNGMRRDWLVRDC
Sbjct: 181 LGDGFGSTPEMFKKNLIWVVTRMQVVVDKYPTWGDVVEVDTWVSQSGKNGMRRDWLVRDC 240

Query: 241 KTGETLTRASSVWVMMNKQTRKLSKIPGEVRGEIEPYFANSPPIVEEDGRKLTKLDDDSA 300
            TGETLTRASSVWVMMNK TR+LSKIP EVRGEIEPYF NS P++ ED RKLTK+DD +A
Sbjct: 241 NTGETLTRASSVWVMMNKLTRRLSKIPEEVRGEIEPYFVNSDPVLAEDSRKLTKIDDKTA 300

Query: 301 DYIRTGLTPRWSDLDVNQHVNNVKYIGWVLESAPLPILESHELSTMTLEYRRECGRDSVL 360
           DY+R+GLTPRWSDLDVNQHVNNVKYIGW+LESAP+ I+E  +L +MTLEYRRECGRDSVL
Sbjct: 301 DYVRSGLTPRWSDLDVNQHVNNVKYIGWILESAPVGIMERQKLKSMTLEYRRECGRDSVL 360

Query: 361 QSLTAVSSAGISNLADAGDIECHHLLRLENGAEIVRGRTEWRPKHAT 403
           QSLTAV+   I NLA AGD+EC HLLRL++GAE+VRGRTEW  K  T
Sbjct: 361 QSLTAVTGCDIGNLATAGDVECQHLLRLQDGAEVVRGRTEWSSKTPT 405

[Close]

BLAST of Carg12175-RA vs. TAIR 10
Match: AT3G25110.1 (fatA acyl-ACP thioesterase )

HSP 1 Score: 275.8 bits (704), Expect = 5.7e-74
Identity = 137/292 (46.92%), Postives = 190/292 (65.07%), Query Frame = 0


Query: 120 LIDSFGLGRIVQDGLVFRQNFSIRSYEIGADRTASIETLMNHLQETALNHVKTAGLLGDG 179
           L D   LG + +DGL +++ F +RSYE+G+++TA++ET+ N LQE   NH ++ G   DG
Sbjct: 68  LADQLRLGSLTEDGLSYKEKFVVRSYEVGSNKTATVETIANLLQEVGCNHAQSVGFSTDG 127

Query: 180 FGSTPEMCKKNLIWVVAKMQVVVDRYPTWGDVVQVDTWVGASGKNGMRRDWLVRDCKTGE 239
           F +T  M K +LIWV A+M + + +YP WGDVV+++TW  + G+ G RRDW+++D  TGE
Sbjct: 128 FATTTTMRKLHLIWVTARMHIEIYKYPAWGDVVEIETWCQSEGRIGTRRDWILKDSVTGE 187

Query: 240 TLTRASSVWVMMNKQTRKLSKIPGEVRGEIEPYFANSPPIV--EEDGRKLTKLD--DDSA 299
              RA+S WVMMN+ TR+L K+  +VR E   +    P +   EE+ R L K+   +D A
Sbjct: 188 VTGRATSKWVMMNQDTRRLQKVSDDVRDEYLVFCPQEPRLAFPEENNRSLKKIPKLEDPA 247

Query: 300 DYIRTGLTPRWSDLDVNQHVNNVKYIGWVLESAPLPILESHELSTMTLEYRRECGRDSVL 359
            Y   GL PR +DLD+NQHVNNV YIGWVLES P  I+++HEL  +TL+YRREC +D V+
Sbjct: 248 QYSMIGLKPRRADLDMNQHVNNVTYIGWVLESIPQEIVDTHELQVITLDYRRECQQDDVV 307

Query: 360 QSLTAVSS--AGISNLADAG-----DIECHHLLRLE-NGAEIVRGRTEWRPK 400
            SLT  +S   G +  A +G     D +  HLLRL  +G EI RG T WR K
Sbjct: 308 DSLTTTTSEIGGTNGSATSGTQGHNDSQFLHLLRLSGDGQEINRGTTLWRKK 359

[Close]

BLAST of Carg12175-RA vs. TAIR 10
Match: AT4G13050.1 (Acyl-ACP thioesterase )

HSP 1 Score: 275.4 bits (703), Expect = 7.5e-74
Identity = 134/296 (45.27%), Postives = 189/296 (63.85%), Query Frame = 0


Query: 122 DSFGLGRIVQDGLVFRQNFSIRSYEIGADRTASIETLMNHLQETALNHVKTAGLLGDGFG 181
           D    GR+++DG  +++ F +RSYE+G ++TA+IET+ N LQE A NHV+  G   DGF 
Sbjct: 69  DRLRFGRLMEDGFSYKEKFIVRSYEVGINKTATIETIANLLQEVACNHVQNVGFSTDGFA 128

Query: 182 STPEMCKKNLIWVVAKMQVVVDRYPTWGDVVQVDTWVGASGKNGMRRDWLVRDCKTGETL 241
           +T  M K +LIWV A+M + + +YP W DVV+++TW  + G+ G RRDW+++DC TGE +
Sbjct: 129 TTLTMRKLHLIWVTARMHIEIYKYPAWSDVVEIETWCQSEGRIGTRRDWILKDCATGEVI 188

Query: 242 TRASSVWVMMNKQTRKLSKIPGEVRGEIEPYFANSPPIV--EEDGRKLTKLD--DDSADY 301
            RA+S WVMMN+ TR+L ++  EVR E   +    P +   EE+   L K+   +D A Y
Sbjct: 189 GRATSKWVMMNQDTRRLQRVTDEVRDEYLVFCPPEPRLAFPEENNSSLKKIPKLEDPAQY 248

Query: 302 IRTGLTPRWSDLDVNQHVNNVKYIGWVLESAPLPILESHELSTMTLEYRRECGRDSVLQS 361
              GL PR +DLD+NQHVNNV YIGWVLES P  I+++HEL  +TL+YRREC +D ++ S
Sbjct: 249 SMLGLKPRRADLDMNQHVNNVTYIGWVLESIPQEIIDTHELKVITLDYRRECQQDDIVDS 308

Query: 362 -------------LTAVSSAGISNLADAGDIECHHLLRL-ENGAEIVRGRTEWRPK 400
                        LT  + +  S+  +  +    H+LRL ENG EI RGRT+WR K
Sbjct: 309 LTTSETPNEVVSKLTGTNGSTTSSKREHNESHFLHILRLSENGQEINRGRTQWRKK 364

The following BLAST results are available for this feature:

BLAST of Carg12175-RA vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7021828.1	2.4e-239	100.00	Palmitoyl-acyl carrier protein thioesterase, chloroplastic [Cucurbita argyrosper...	[more]
XP_022933531.1	6.9e-239	99.76	palmitoyl-acyl carrier protein thioesterase, chloroplastic-like [Cucurbita mosch...	[more]
KAG6587939.1	3.4e-238	99.76	Palmitoyl-acyl carrier protein thioesterase, chloroplastic, partial [Cucurbita a...	[more]
XP_023531198.1	1.0e-237	99.04	palmitoyl-acyl carrier protein thioesterase, chloroplastic-like [Cucurbita pepo ...	[more]
XP_038879532.1	8.5e-229	95.43	palmitoyl-acyl carrier protein thioesterase, chloroplastic-like [Benincasa hispi...	[more]

BLAST of Carg12175-RA vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SQI3	9.2e-178	74.22	Palmitoyl-acyl carrier protein thioesterase, chloroplastic OS=Gossypium hirsutum...	[more]
Q9SJE2	4.6e-177	76.17	Palmitoyl-acyl carrier protein thioesterase, chloroplastic OS=Arabidopsis thalia...	[more]
Q39513	3.2e-162	70.07	Palmitoyl-acyl carrier protein thioesterase, chloroplastic OS=Cuphea hookeriana ...	[more]
G3ESV0	1.1e-159	70.22	Acyl-[acyl-carrier-protein] hydrolase FATB2, chloroplastic (Fragment) OS=Cuphea ...	[more]
G3ESU9	9.7e-135	58.05	Acyl-[acyl-carrier-protein] hydrolase FATB1, chloroplastic OS=Cuphea viscosissim...	[more]

BLAST of Carg12175-RA vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F013	3.4e-239	99.76	Acyl-[acyl-carrier-protein] hydrolase OS=Cucurbita moschata OX=3662 GN=LOC111440...	[more]
A0A5A7TJ86	2.3e-227	94.71	Acyl-[acyl-carrier-protein] hydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3CJ27	2.3e-227	94.71	Acyl-[acyl-carrier-protein] hydrolase OS=Cucumis melo OX=3656 GN=LOC103501532 PE...	[more]
A0A5D3BJS2	5.0e-227	94.47	Acyl-[acyl-carrier-protein] hydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A0A0LWZ2	1.5e-226	94.94	Acyl-[acyl-carrier-protein] hydrolase OS=Cucumis sativus OX=3659 GN=Csa_1G397120...	[more]

BLAST of Carg12175-RA vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G08510.1	3.3e-178	76.17	fatty acyl-ACP thioesterases B	[more]
AT3G25110.1	5.7e-74	46.92	fatA acyl-ACP thioesterase	[more]
AT4G13050.1	7.5e-74	45.27	Acyl-ACP thioesterase	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021113	Acyl-ACP-thioesterase, N-terminal	PFAM	PF12590	Acyl-thio_N	coord: 1..122 e-value: 2.5E-50 score: 170.4
IPR002864	Acyl-ACP thioesterase	PFAM	PF01643	Acyl-ACP_TE	coord: 133..397 e-value: 1.1E-81 score: 273.8
None	No IPR available	GENE3D	3.10.129.10	Hotdog Thioesterase	coord: 126..403 e-value: 8.9E-97 score: 325.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 18..51
None	No IPR available	PANTHER	PTHR31727:SF2	PALMITOYL-ACYL CARRIER PROTEIN THIOESTERASE, CHLOROPLASTIC	coord: 1..402
None	No IPR available	CDD	cd00586	4HBT	coord: 136..252 e-value: 4.39693E-17 score: 74.5649
IPR045023	Acyl-[acyl-carrier-protein] hydrolase FATA/B	PANTHER	PTHR31727	OLEOYL-ACYL CARRIER PROTEIN THIOESTERASE 1, CHLOROPLASTIC	coord: 1..402
IPR029069	HotDog domain superfamily	SUPERFAMILY	54637	Thioesterase/thiol ester dehydrase-isomerase	coord: 296..396
IPR029069	HotDog domain superfamily	SUPERFAMILY	54637	Thioesterase/thiol ester dehydrase-isomerase	coord: 130..282

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg12175	Carg12175	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg12175-RA:6	Carg12175-RA:6	exon
Carg12175-RA:5	Carg12175-RA:5	exon
Carg12175-RA:4	Carg12175-RA:4	exon
Carg12175-RA:3	Carg12175-RA:3	exon
Carg12175-RA:2	Carg12175-RA:2	exon
Carg12175-RA:1	Carg12175-RA:1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg12175-RA:cds	Carg12175-RA:cds_6	CDS
Carg12175-RA:cds	Carg12175-RA:cds_5	CDS
Carg12175-RA:cds	Carg12175-RA:cds_4	CDS
Carg12175-RA:cds	Carg12175-RA:cds_3	CDS
Carg12175-RA:cds	Carg12175-RA:cds_2	CDS
Carg12175-RA:cds	Carg12175-RA:cds	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg12175-RA:five_prime_utr	Carg12175-RA:five_prime_utr	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg12175-RA	Carg12175-RA-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006633	fatty acid biosynthetic process
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0016297	acyl-[acyl-carrier-protein] hydrolase activity
molecular_function	GO:0016790	thiolester hydrolase activity
molecular_function	GO:0000036	acyl carrier activity