Carg10902-RA (mRNA) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg10902-RA
Type	mRNA
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Methyltransf_21 domain-containing protein
Location	Carg_Chr05: 11441198 .. 11444225 (-)
Sequence length	969
RNA-Seq Expression	Carg10902-RA
Synteny	Carg10902-RA

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAAATGCCTGGAAAAGAGACAAGGCACCCAAACTCCTCTCGCCCATTTCTCTGTTCTTCCTCTTTTCATTCTGTATACTCATCATTTTCTTCTTCCTCTTCGGCAACTCGAATCCTTCAGAGCAATCCACTCCTAGTTTCACAATCAAGCCCGATTTTCCTTTCCGATCAATCTCTCCCTTCGATTGCTTCAAATGCCCTCAATCCTTCCCGGTTATCGCCAACGTTGTGGAAGGAGTTCGATATCCGTTTCTGTTTTCGATCGCGGATTTGGGGAATTTGCCCGATAAGCCCCACAAGAACATTGTCAGGATGCTGAAGGGAAAGCCCTTTCGTAAGCCGGATATTTCGGTGACGATTCAGGAGGTTTTGGAGAAGATGAAGAGCGATTCTAGAGATGGGTATGTTGTTGATGTGGGTGCTAATGTGGGAATGGCGAGCTTCGCTGCTGCTGCGATGGGTTTTCGTGTTTTGGCATTTGAGCCGGTTTTTGAAAATTTGCAGAGAATTTGTGATGGAATTTATCTGAATAGGGTTGGGGAATTGGTGAATGTGTTTGAGGCTGCTGCATCTGATAAGCTTGGGAACATCACTGTTCATAAGGTATTATCTGGTTCATAAAATCAATCTTTACAGTCTCATTTGCGATTACATTTTGTTGGATCTCAAAACTTTGCATGCTGATGCCAATGTTGTGTTGAGGATTGTTGGGAGGGAGTCCGACGTTAGCTAATTTAGAGGATGATCATAGGTTTATAAGTAAGGAACACCTTTCCTATGAGGCTTTTTGGGAAACCAAAAGCAAAGCCATGAGAGCTTATGCTCAACGTGGACAATATTATACCATTGTGGAGGTTCGTGATTCCTAACACGGTATCAGAGTCATGCCCTTAACTTAGTCATGTCAATAGAATCCTCAAGTGTCGAACAAAGGGTGTATTAGGACTCCAGAGAAGGAGTTGAGTCTCAAGTAAGGGGAGGTTGTTCAAGGGCTCCATAAGTCTCAGGAGAGGCTCTATGGTGTACTTTGGTCGAGCGGAGGATTGTTGAGGATTATAGGGAAAGGAGTCCTGCATCGGCTAATTAAGGGTACGCCTTCATTAGTATGAGGCCTCTTGGGGAAACCAAAAGCAAAACCATAAGAGCTTATACTCAAAATGGACAATACCATTGTGGAGGTTCGTGATTCCTAACATGGTATCAGAGTCATGCCCTAAACTTAGTCATGTCAATAGAATCCTCAAGTATCAAACAAAGGGTTGTACTTTGTTCGAAGGCTTCAGAAAAGAAGTCGAGTCTCCATTAAGGGTAGGCTGTTCAAGGGCTCCATAGGCCTCAGGGGAGGGTTTATGATGTTCTTTATTCGGGGGGAGGATTGTTGGGAGGGAGTTCCACGTTGACTAATTTAGGGAATGATCCTGGGTTTATGAGTAAGGAATACATCTCCATTGATACGAGGCCTCTTGGGGAAACCCAAAGCAAAGCCATGAGAACTTATGCTCGAAGTGGACAATATCATGCCAGATTCTTAATATGTCGTTCTCCAAATATGGGCGGGCGGGTTGAAGATTTAGTGTTTACATAACTCGCCTATTATGCTTCAGAACTGGTTTATTTTGTGGATGAAAAAGCTGGTTAGTCTATCAAATTATGTATACCACTGTGAAAATGCTTTGACTTAGCCAGAGGTGTAGTGAGGAGAGGTCAAGATCTGTGGGCTTAGAGATCTGTTTTTCTTGTTTAAGTCAATTCCATATGATTGTGTTAACCTTTCACCAGCCATTTTCTTGCTGATGATAATTTTCCCTCCTAGTCTTCTAATGATTCTAATGGACTCGTATTACTAACCGGTTGTATGTCGTAGTTCCTCGAAAACCCTTTTAGATGTTCTTCTTGAATTAAGTCGAACAATTAGAAGGTCAGGTGTCTTCTCGAACTGTTATGGAATGATCGACAAGTTTAAAAAGTAGAAGAAATTCAGGGTATGATTCGAACTGCAGAATGATTATCCACTTTGGGTATTGAAATCTCACGACCCAAACCCACCGCTAGCAAATATTGTCTACTTTGGGCTTTCCCTTTTGAACTTCCCCTTCAAGGTTTTTAAAACGTCTCTGTTAGGGAGAGGTTTCCACACCCTTACAAAGAATGCTTTGTTCTCCTCCTCCATCGATGTGGGATCTCACAATCCACCTCCCTTCGGGGCCCAGCATCCTCGCAGGCACTCGTTCCCTTCTCCAATCAATATGGGACCCTCCAATCCACCCTCATTTGGGGCCAGTGTCCTTGCTGACATACCGCCTCGTGTCCACCTTCCTTAGCGTCCTTGCTGACATACCGCCTCGTGTCCACCTTCCTTAGCGTCCTTGCTGACATACCGCCTCGTGTCCACCTTCCTTAGTAGTGTATTCCGTTTTGGAATCGAGATGTGGACAGAAAACATCAGCTAAACTTGTTTTTCATGGGGGCAGCTCATGAGTTTTACCAGCAGCATAGTGAAACTTGATTGGTGTCATTCAGTTCAATGTCATGTCATTGGTCATATATACAATTTACAAAGCTCTTGATTTCTTTGCTGTTCTAAGGAAGTGGGGGCATTGAGCCATCCTGATCTGGTTTGTTTTCTGTAAGCTTCTTTCACTGACTTTTGCTCATTACCCAGCTGGTTGGTCGGCTTGACAACAGTGCTGTTTCAGCAACAGGAGCAAAGTTGGCATTCAAATCTAATGAAGAAATAGCAGTTCAAGTGAAGTCAATACCACTAGATGAAGTAATCCCCGAGTCCGAACGGGTGCTCGTAATAAAAATCGACGTTCAGGGATGGGAATATCATGTGCTAAAAGGGGCAAAGAAGATCTTGTCTAGAAAGGGAACTGAAGCCCCATATCTCATCTATGAGGAAGATGAACGACTGCTAAAAGCCAGTAATAGCAGTTCAAAGGAGATCAGAGAATTCCTTCATTCTGTAGGTTATGATCACTGCACCCAACATGGCACAGATGCACACTGCACAAAAACTGGTTGA

mRNA sequence

ATGGCAAATGCCTGGAAAAGAGACAAGGCACCCAAACTCCTCTCGCCCATTTCTCTGTTCTTCCTCTTTTCATTCTGTATACTCATCATTTTCTTCTTCCTCTTCGGCAACTCGAATCCTTCAGAGCAATCCACTCCTAGTTTCACAATCAAGCCCGATTTTCCTTTCCGATCAATCTCTCCCTTCGATTGCTTCAAATGCCCTCAATCCTTCCCGGTTATCGCCAACGTTGTGGAAGGAGTTCGATATCCGTTTCTGTTTTCGATCGCGGATTTGGGGAATTTGCCCGATAAGCCCCACAAGAACATTGTCAGGATGCTGAAGGGAAAGCCCTTTCGTAAGCCGGATATTTCGGTGACGATTCAGGAGGTTTTGGAGAAGATGAAGAGCGATTCTAGAGATGGGTATGTTGTTGATGTGGGTGCTAATGTGGGAATGGCGAGCTTCGCTGCTGCTGCGATGGGTTTTCGTGTTTTGGCATTTGAGCCGGTTTTTGAAAATTTGCAGAGAATTTGTGATGGAATTTATCTGAATAGGGTTGGGGAATTGGTGAATGTGTTTGAGGCTGCTGCATCTGATAAGCTTGGGAACATCACTGTTCATAAGCTGGTTGGTCGGCTTGACAACAGTGCTGTTTCAGCAACAGGAGCAAAGTTGGCATTCAAATCTAATGAAGAAATAGCAGTTCAAGTGAAGTCAATACCACTAGATGAAGTAATCCCCGAGTCCGAACGGGTGCTCGTAATAAAAATCGACGTTCAGGGATGGGAATATCATGTGCTAAAAGGGGCAAAGAAGATCTTGTCTAGAAAGGGAACTGAAGCCCCATATCTCATCTATGAGGAAGATGAACGACTGCTAAAAGCCAGTAATAGCAGTTCAAAGGAGATCAGAGAATTCCTTCATTCTGTAGGTTATGATCACTGCACCCAACATGGCACAGATGCACACTGCACAAAAACTGGTTGA

Coding sequence (CDS)

ATGGCAAATGCCTGGAAAAGAGACAAGGCACCCAAACTCCTCTCGCCCATTTCTCTGTTCTTCCTCTTTTCATTCTGTATACTCATCATTTTCTTCTTCCTCTTCGGCAACTCGAATCCTTCAGAGCAATCCACTCCTAGTTTCACAATCAAGCCCGATTTTCCTTTCCGATCAATCTCTCCCTTCGATTGCTTCAAATGCCCTCAATCCTTCCCGGTTATCGCCAACGTTGTGGAAGGAGTTCGATATCCGTTTCTGTTTTCGATCGCGGATTTGGGGAATTTGCCCGATAAGCCCCACAAGAACATTGTCAGGATGCTGAAGGGAAAGCCCTTTCGTAAGCCGGATATTTCGGTGACGATTCAGGAGGTTTTGGAGAAGATGAAGAGCGATTCTAGAGATGGGTATGTTGTTGATGTGGGTGCTAATGTGGGAATGGCGAGCTTCGCTGCTGCTGCGATGGGTTTTCGTGTTTTGGCATTTGAGCCGGTTTTTGAAAATTTGCAGAGAATTTGTGATGGAATTTATCTGAATAGGGTTGGGGAATTGGTGAATGTGTTTGAGGCTGCTGCATCTGATAAGCTTGGGAACATCACTGTTCATAAGCTGGTTGGTCGGCTTGACAACAGTGCTGTTTCAGCAACAGGAGCAAAGTTGGCATTCAAATCTAATGAAGAAATAGCAGTTCAAGTGAAGTCAATACCACTAGATGAAGTAATCCCCGAGTCCGAACGGGTGCTCGTAATAAAAATCGACGTTCAGGGATGGGAATATCATGTGCTAAAAGGGGCAAAGAAGATCTTGTCTAGAAAGGGAACTGAAGCCCCATATCTCATCTATGAGGAAGATGAACGACTGCTAAAAGCCAGTAATAGCAGTTCAAAGGAGATCAGAGAATTCCTTCATTCTGTAGGTTATGATCACTGCACCCAACATGGCACAGATGCACACTGCACAAAAACTGGTTGA

Protein sequence

MANAWKRDKAPKLLSPISLFFLFSFCILIIFFFLFGNSNPSEQSTPSFTIKPDFPFRSISPFDCFKCPQSFPVIANVVEGVRYPFLFSIADLGNLPDKPHKNIVRMLKGKPFRKPDISVTIQEVLEKMKSDSRDGYVVDVGANVGMASFAAAAMGFRVLAFEPVFENLQRICDGIYLNRVGELVNVFEAAASDKLGNITVHKLVGRLDNSAVSATGAKLAFKSNEEIAVQVKSIPLDEVIPESERVLVIKIDVQGWEYHVLKGAKKILSRKGTEAPYLIYEEDERLLKASNSSSKEIREFLHSVGYDHCTQHGTDAHCTKTG

Homology

[Close]

BLAST of Carg10902-RA vs. NCBI nr
Match: KAG6599403.1 (hypothetical protein SDJN03_09181, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030390.1 hypothetical protein SDJN02_08737, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 641.7 bits (1654), Expect = 3.3e-180
Identity = 322/322 (100.00%), Postives = 322/322 (100.00%), Query Frame = 0


Query: 1   MANAWKRDKAPKLLSPISLFFLFSFCILIIFFFLFGNSNPSEQSTPSFTIKPDFPFRSIS 60
           MANAWKRDKAPKLLSPISLFFLFSFCILIIFFFLFGNSNPSEQSTPSFTIKPDFPFRSIS
Sbjct: 1   MANAWKRDKAPKLLSPISLFFLFSFCILIIFFFLFGNSNPSEQSTPSFTIKPDFPFRSIS 60

Query: 61  PFDCFKCPQSFPVIANVVEGVRYPFLFSIADLGNLPDKPHKNIVRMLKGKPFRKPDISVT 120
           PFDCFKCPQSFPVIANVVEGVRYPFLFSIADLGNLPDKPHKNIVRMLKGKPFRKPDISVT
Sbjct: 61  PFDCFKCPQSFPVIANVVEGVRYPFLFSIADLGNLPDKPHKNIVRMLKGKPFRKPDISVT 120

Query: 121 IQEVLEKMKSDSRDGYVVDVGANVGMASFAAAAMGFRVLAFEPVFENLQRICDGIYLNRV 180
           IQEVLEKMKSDSRDGYVVDVGANVGMASFAAAAMGFRVLAFEPVFENLQRICDGIYLNRV
Sbjct: 121 IQEVLEKMKSDSRDGYVVDVGANVGMASFAAAAMGFRVLAFEPVFENLQRICDGIYLNRV 180

Query: 181 GELVNVFEAAASDKLGNITVHKLVGRLDNSAVSATGAKLAFKSNEEIAVQVKSIPLDEVI 240
           GELVNVFEAAASDKLGNITVHKLVGRLDNSAVSATGAKLAFKSNEEIAVQVKSIPLDEVI
Sbjct: 181 GELVNVFEAAASDKLGNITVHKLVGRLDNSAVSATGAKLAFKSNEEIAVQVKSIPLDEVI 240

Query: 241 PESERVLVIKIDVQGWEYHVLKGAKKILSRKGTEAPYLIYEEDERLLKASNSSSKEIREF 300
           PESERVLVIKIDVQGWEYHVLKGAKKILSRKGTEAPYLIYEEDERLLKASNSSSKEIREF
Sbjct: 241 PESERVLVIKIDVQGWEYHVLKGAKKILSRKGTEAPYLIYEEDERLLKASNSSSKEIREF 300

Query: 301 LHSVGYDHCTQHGTDAHCTKTG 323
           LHSVGYDHCTQHGTDAHCTKTG
Sbjct: 301 LHSVGYDHCTQHGTDAHCTKTG 322

[Close]

BLAST of Carg10902-RA vs. NCBI nr
Match: XP_023521491.1 (uncharacterized protein LOC111785313 [Cucurbita pepo subsp. pepo] >XP_023547117.1 uncharacterized protein LOC111806022 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 640.6 bits (1651), Expect = 7.4e-180
Identity = 321/322 (99.69%), Postives = 322/322 (100.00%), Query Frame = 0


Query: 1   MANAWKRDKAPKLLSPISLFFLFSFCILIIFFFLFGNSNPSEQSTPSFTIKPDFPFRSIS 60
           MANAWKRDKAPKLLSPISLFFLFSFCILIIFFFLFGNSNPSEQSTPSFTIKPDFPFRSIS
Sbjct: 1   MANAWKRDKAPKLLSPISLFFLFSFCILIIFFFLFGNSNPSEQSTPSFTIKPDFPFRSIS 60

Query: 61  PFDCFKCPQSFPVIANVVEGVRYPFLFSIADLGNLPDKPHKNIVRMLKGKPFRKPDISVT 120
           PFDCFKCPQSFPVIANVVEGVRYPFLFSIADLGNLPDKPHKNIVRMLKGKPFRKPDISVT
Sbjct: 61  PFDCFKCPQSFPVIANVVEGVRYPFLFSIADLGNLPDKPHKNIVRMLKGKPFRKPDISVT 120

Query: 121 IQEVLEKMKSDSRDGYVVDVGANVGMASFAAAAMGFRVLAFEPVFENLQRICDGIYLNRV 180
           IQEVLEKMKSDSRDGYVVDVGANVGMASFAAAAMGFRVLAFEPVFENLQRICDGIYLNRV
Sbjct: 121 IQEVLEKMKSDSRDGYVVDVGANVGMASFAAAAMGFRVLAFEPVFENLQRICDGIYLNRV 180

Query: 181 GELVNVFEAAASDKLGNITVHKLVGRLDNSAVSATGAKLAFKSNEEIAVQVKSIPLDEVI 240
           GELVNVFEAAASDKLGNITVHKLVGRLDNSAVSATGAKLAFKSNEEIAVQVKSIPLDEVI
Sbjct: 181 GELVNVFEAAASDKLGNITVHKLVGRLDNSAVSATGAKLAFKSNEEIAVQVKSIPLDEVI 240

Query: 241 PESERVLVIKIDVQGWEYHVLKGAKKILSRKGTEAPYLIYEEDERLLKASNSSSKEIREF 300
           PESERVL+IKIDVQGWEYHVLKGAKKILSRKGTEAPYLIYEEDERLLKASNSSSKEIREF
Sbjct: 241 PESERVLLIKIDVQGWEYHVLKGAKKILSRKGTEAPYLIYEEDERLLKASNSSSKEIREF 300

Query: 301 LHSVGYDHCTQHGTDAHCTKTG 323
           LHSVGYDHCTQHGTDAHCTKTG
Sbjct: 301 LHSVGYDHCTQHGTDAHCTKTG 322

[Close]

BLAST of Carg10902-RA vs. NCBI nr
Match: XP_022946209.1 (uncharacterized protein LOC111450361 [Cucurbita moschata])

HSP 1 Score: 639.4 bits (1648), Expect = 1.6e-179
Identity = 320/322 (99.38%), Postives = 322/322 (100.00%), Query Frame = 0


Query: 1   MANAWKRDKAPKLLSPISLFFLFSFCILIIFFFLFGNSNPSEQSTPSFTIKPDFPFRSIS 60
           MANAWKRDKAPKLLSPISLFFLFSFCILIIFFFLFGNSNPSEQSTPSFTIKPDFPFRSIS
Sbjct: 1   MANAWKRDKAPKLLSPISLFFLFSFCILIIFFFLFGNSNPSEQSTPSFTIKPDFPFRSIS 60

Query: 61  PFDCFKCPQSFPVIANVVEGVRYPFLFSIADLGNLPDKPHKNIVRMLKGKPFRKPDISVT 120
           PFDCFKCPQSFPVIANVVEGVRYPFLFSIADLGNLPDKPHKNIVRMLKGKPFRKPDISVT
Sbjct: 61  PFDCFKCPQSFPVIANVVEGVRYPFLFSIADLGNLPDKPHKNIVRMLKGKPFRKPDISVT 120

Query: 121 IQEVLEKMKSDSRDGYVVDVGANVGMASFAAAAMGFRVLAFEPVFENLQRICDGIYLNRV 180
           IQEVLEKMKSDSRDGYVVDVGANVGMASFAAAAMGFRVLAFEPVFENLQRICDGIYLNRV
Sbjct: 121 IQEVLEKMKSDSRDGYVVDVGANVGMASFAAAAMGFRVLAFEPVFENLQRICDGIYLNRV 180

Query: 181 GELVNVFEAAASDKLGNITVHKLVGRLDNSAVSATGAKLAFKSNEEIAVQVKSIPLDEVI 240
           GELVNVFEAAASD+LGNITVHKLVGRLDNSAVSATGAKLAFKSNEEIAVQVKSIPLDEVI
Sbjct: 181 GELVNVFEAAASDRLGNITVHKLVGRLDNSAVSATGAKLAFKSNEEIAVQVKSIPLDEVI 240

Query: 241 PESERVLVIKIDVQGWEYHVLKGAKKILSRKGTEAPYLIYEEDERLLKASNSSSKEIREF 300
           PESERVL+IKIDVQGWEYHVLKGAKKILSRKGTEAPYLIYEEDERLLKASNSSSKEIREF
Sbjct: 241 PESERVLLIKIDVQGWEYHVLKGAKKILSRKGTEAPYLIYEEDERLLKASNSSSKEIREF 300

Query: 301 LHSVGYDHCTQHGTDAHCTKTG 323
           LHSVGYDHCTQHGTDAHCTKTG
Sbjct: 301 LHSVGYDHCTQHGTDAHCTKTG 322

[Close]

BLAST of Carg10902-RA vs. NCBI nr
Match: XP_022999168.1 (uncharacterized protein LOC111493632 [Cucurbita maxima])

HSP 1 Score: 638.6 bits (1646), Expect = 2.8e-179
Identity = 319/322 (99.07%), Postives = 322/322 (100.00%), Query Frame = 0


Query: 1   MANAWKRDKAPKLLSPISLFFLFSFCILIIFFFLFGNSNPSEQSTPSFTIKPDFPFRSIS 60
           MANAWKRDKAPKLLSPISLFFLFSFCILIIFFFLFGNSNPSEQSTPSFTIKPDFPFRSIS
Sbjct: 1   MANAWKRDKAPKLLSPISLFFLFSFCILIIFFFLFGNSNPSEQSTPSFTIKPDFPFRSIS 60

Query: 61  PFDCFKCPQSFPVIANVVEGVRYPFLFSIADLGNLPDKPHKNIVRMLKGKPFRKPDISVT 120
           PFDCFKCPQSFPVIANVVEGVRYPF+FSIADLGNLPDKPHKNIVRMLKGKPFRKPDISVT
Sbjct: 61  PFDCFKCPQSFPVIANVVEGVRYPFMFSIADLGNLPDKPHKNIVRMLKGKPFRKPDISVT 120

Query: 121 IQEVLEKMKSDSRDGYVVDVGANVGMASFAAAAMGFRVLAFEPVFENLQRICDGIYLNRV 180
           IQEVLEKMKSDSRDGYVVDVGANVGMASFAAAAMGFRVLAFEPVFENLQRICDGIYLNRV
Sbjct: 121 IQEVLEKMKSDSRDGYVVDVGANVGMASFAAAAMGFRVLAFEPVFENLQRICDGIYLNRV 180

Query: 181 GELVNVFEAAASDKLGNITVHKLVGRLDNSAVSATGAKLAFKSNEEIAVQVKSIPLDEVI 240
           GELVNVFEAAASD+LGNITVHKLVGRLDNSAVSATGAKLAFKSNEEIAVQVKSIPLDEVI
Sbjct: 181 GELVNVFEAAASDRLGNITVHKLVGRLDNSAVSATGAKLAFKSNEEIAVQVKSIPLDEVI 240

Query: 241 PESERVLVIKIDVQGWEYHVLKGAKKILSRKGTEAPYLIYEEDERLLKASNSSSKEIREF 300
           PESERVL+IKIDVQGWEYHVLKGAKKILSRKGTEAPYLIYEEDERLLKASNSSSKEIREF
Sbjct: 241 PESERVLLIKIDVQGWEYHVLKGAKKILSRKGTEAPYLIYEEDERLLKASNSSSKEIREF 300

Query: 301 LHSVGYDHCTQHGTDAHCTKTG 323
           LHSVGYDHCTQHGTDAHCTKTG
Sbjct: 301 LHSVGYDHCTQHGTDAHCTKTG 322

[Close]

BLAST of Carg10902-RA vs. NCBI nr
Match: XP_023522470.1 (uncharacterized protein LOC111786452 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 609.8 bits (1571), Expect = 1.4e-170
Identity = 308/323 (95.36%), Postives = 314/323 (97.21%), Query Frame = 0


Query: 1   MANAWKRDKAPKLLSPISLFFLFSFCILIIFFFLFGNSNPSEQSTPSFTIKPDFPFRS-I 60
           MANAWKRDK+P+ LSPI LFFLFSF ILI+FFFLFGNS+P EQS PSFTIKP F F + I
Sbjct: 1   MANAWKRDKSPRFLSPIFLFFLFSFSILILFFFLFGNSSPREQSAPSFTIKPHFSFPTVI 60

Query: 61  SPFDCFKCPQSFPVIANVVEGVRYPFLFSIADLGNLPDKPHKNIVRMLKGKPFRKPDISV 120
           SPFDCFKCPQSFPVIANVVEGVRYPFLFSIADLGNLPDKPHKNIVRMLKGKPFRKPDISV
Sbjct: 61  SPFDCFKCPQSFPVIANVVEGVRYPFLFSIADLGNLPDKPHKNIVRMLKGKPFRKPDISV 120

Query: 121 TIQEVLEKMKSDSRDGYVVDVGANVGMASFAAAAMGFRVLAFEPVFENLQRICDGIYLNR 180
           TIQEVLEKMKSDSRDGYVVDVGANVGMASFAAAAMGFRVLAFEPVFENLQRICDGIYLNR
Sbjct: 121 TIQEVLEKMKSDSRDGYVVDVGANVGMASFAAAAMGFRVLAFEPVFENLQRICDGIYLNR 180

Query: 181 VGELVNVFEAAASDKLGNITVHKLVGRLDNSAVSATGAKLAFKSNEEIAVQVKSIPLDEV 240
           VGELVNVFEAAASDKLGNITVHKLVGRLDNSAVSATGAKLAFKSNEEIAVQVKSIPLDEV
Sbjct: 181 VGELVNVFEAAASDKLGNITVHKLVGRLDNSAVSATGAKLAFKSNEEIAVQVKSIPLDEV 240

Query: 241 IPESERVLVIKIDVQGWEYHVLKGAKKILSRKGTEAPYLIYEEDERLLKASNSSSKEIRE 300
           IPESERVL+IKIDVQGWEYHVLKGAKKILSRKGTEAPYLIYEEDERLLKASNSSSKEIRE
Sbjct: 241 IPESERVLLIKIDVQGWEYHVLKGAKKILSRKGTEAPYLIYEEDERLLKASNSSSKEIRE 300

Query: 301 FLHSVGYDHCTQHGTDAHCTKTG 323
           FLHSVGYDHCTQHGTDAHCTKTG
Sbjct: 301 FLHSVGYDHCTQHGTDAHCTKTG 323

[Close]

BLAST of Carg10902-RA vs. ExPASy TrEMBL
Match: A0A6J1G359 (uncharacterized protein LOC111450361 OS=Cucurbita moschata OX=3662 GN=LOC111450361 PE=4 SV=1)

HSP 1 Score: 639.4 bits (1648), Expect = 8.0e-180
Identity = 320/322 (99.38%), Postives = 322/322 (100.00%), Query Frame = 0


Query: 1   MANAWKRDKAPKLLSPISLFFLFSFCILIIFFFLFGNSNPSEQSTPSFTIKPDFPFRSIS 60
           MANAWKRDKAPKLLSPISLFFLFSFCILIIFFFLFGNSNPSEQSTPSFTIKPDFPFRSIS
Sbjct: 1   MANAWKRDKAPKLLSPISLFFLFSFCILIIFFFLFGNSNPSEQSTPSFTIKPDFPFRSIS 60

Query: 61  PFDCFKCPQSFPVIANVVEGVRYPFLFSIADLGNLPDKPHKNIVRMLKGKPFRKPDISVT 120
           PFDCFKCPQSFPVIANVVEGVRYPFLFSIADLGNLPDKPHKNIVRMLKGKPFRKPDISVT
Sbjct: 61  PFDCFKCPQSFPVIANVVEGVRYPFLFSIADLGNLPDKPHKNIVRMLKGKPFRKPDISVT 120

Query: 121 IQEVLEKMKSDSRDGYVVDVGANVGMASFAAAAMGFRVLAFEPVFENLQRICDGIYLNRV 180
           IQEVLEKMKSDSRDGYVVDVGANVGMASFAAAAMGFRVLAFEPVFENLQRICDGIYLNRV
Sbjct: 121 IQEVLEKMKSDSRDGYVVDVGANVGMASFAAAAMGFRVLAFEPVFENLQRICDGIYLNRV 180

Query: 181 GELVNVFEAAASDKLGNITVHKLVGRLDNSAVSATGAKLAFKSNEEIAVQVKSIPLDEVI 240
           GELVNVFEAAASD+LGNITVHKLVGRLDNSAVSATGAKLAFKSNEEIAVQVKSIPLDEVI
Sbjct: 181 GELVNVFEAAASDRLGNITVHKLVGRLDNSAVSATGAKLAFKSNEEIAVQVKSIPLDEVI 240

Query: 241 PESERVLVIKIDVQGWEYHVLKGAKKILSRKGTEAPYLIYEEDERLLKASNSSSKEIREF 300
           PESERVL+IKIDVQGWEYHVLKGAKKILSRKGTEAPYLIYEEDERLLKASNSSSKEIREF
Sbjct: 241 PESERVLLIKIDVQGWEYHVLKGAKKILSRKGTEAPYLIYEEDERLLKASNSSSKEIREF 300

Query: 301 LHSVGYDHCTQHGTDAHCTKTG 323
           LHSVGYDHCTQHGTDAHCTKTG
Sbjct: 301 LHSVGYDHCTQHGTDAHCTKTG 322

[Close]

BLAST of Carg10902-RA vs. ExPASy TrEMBL
Match: A0A6J1KIU6 (uncharacterized protein LOC111493632 OS=Cucurbita maxima OX=3661 GN=LOC111493632 PE=4 SV=1)

HSP 1 Score: 638.6 bits (1646), Expect = 1.4e-179
Identity = 319/322 (99.07%), Postives = 322/322 (100.00%), Query Frame = 0


Query: 1   MANAWKRDKAPKLLSPISLFFLFSFCILIIFFFLFGNSNPSEQSTPSFTIKPDFPFRSIS 60
           MANAWKRDKAPKLLSPISLFFLFSFCILIIFFFLFGNSNPSEQSTPSFTIKPDFPFRSIS
Sbjct: 1   MANAWKRDKAPKLLSPISLFFLFSFCILIIFFFLFGNSNPSEQSTPSFTIKPDFPFRSIS 60

Query: 61  PFDCFKCPQSFPVIANVVEGVRYPFLFSIADLGNLPDKPHKNIVRMLKGKPFRKPDISVT 120
           PFDCFKCPQSFPVIANVVEGVRYPF+FSIADLGNLPDKPHKNIVRMLKGKPFRKPDISVT
Sbjct: 61  PFDCFKCPQSFPVIANVVEGVRYPFMFSIADLGNLPDKPHKNIVRMLKGKPFRKPDISVT 120

Query: 121 IQEVLEKMKSDSRDGYVVDVGANVGMASFAAAAMGFRVLAFEPVFENLQRICDGIYLNRV 180
           IQEVLEKMKSDSRDGYVVDVGANVGMASFAAAAMGFRVLAFEPVFENLQRICDGIYLNRV
Sbjct: 121 IQEVLEKMKSDSRDGYVVDVGANVGMASFAAAAMGFRVLAFEPVFENLQRICDGIYLNRV 180

Query: 181 GELVNVFEAAASDKLGNITVHKLVGRLDNSAVSATGAKLAFKSNEEIAVQVKSIPLDEVI 240
           GELVNVFEAAASD+LGNITVHKLVGRLDNSAVSATGAKLAFKSNEEIAVQVKSIPLDEVI
Sbjct: 181 GELVNVFEAAASDRLGNITVHKLVGRLDNSAVSATGAKLAFKSNEEIAVQVKSIPLDEVI 240

Query: 241 PESERVLVIKIDVQGWEYHVLKGAKKILSRKGTEAPYLIYEEDERLLKASNSSSKEIREF 300
           PESERVL+IKIDVQGWEYHVLKGAKKILSRKGTEAPYLIYEEDERLLKASNSSSKEIREF
Sbjct: 241 PESERVLLIKIDVQGWEYHVLKGAKKILSRKGTEAPYLIYEEDERLLKASNSSSKEIREF 300

Query: 301 LHSVGYDHCTQHGTDAHCTKTG 323
           LHSVGYDHCTQHGTDAHCTKTG
Sbjct: 301 LHSVGYDHCTQHGTDAHCTKTG 322

[Close]

BLAST of Carg10902-RA vs. ExPASy TrEMBL
Match: A0A6J1CPM7 (uncharacterized protein LOC111013146 OS=Momordica charantia OX=3673 GN=LOC111013146 PE=4 SV=1)

HSP 1 Score: 604.4 bits (1557), Expect = 2.8e-169
Identity = 300/322 (93.17%), Postives = 313/322 (97.20%), Query Frame = 0


Query: 1   MANAWKRDKAPKLLSPISLFFLFSFCILIIFFFLFGNSNPSEQSTPSFTIKPDFPFRSIS 60
           MANAWKRDK+PK+LSPISLF LFSF ILIIFFFLFGNS+PSE S PSFTIKP FPFR+IS
Sbjct: 1   MANAWKRDKSPKILSPISLFLLFSFSILIIFFFLFGNSSPSEHSNPSFTIKPHFPFRTIS 60

Query: 61  PFDCFKCPQSFPVIANVVEGVRYPFLFSIADLGNLPDKPHKNIVRMLKGKPFRKPDISVT 120
           PFDCFKCPQS+PVIANVVEGVRYPFLFSIADLGNLPDKPHKNIVRMLKGKPFRKPDISVT
Sbjct: 61  PFDCFKCPQSYPVIANVVEGVRYPFLFSIADLGNLPDKPHKNIVRMLKGKPFRKPDISVT 120

Query: 121 IQEVLEKMKSDSRDGYVVDVGANVGMASFAAAAMGFRVLAFEPVFENLQRICDGIYLNRV 180
           IQEVLEKMK +SR G+VVDVGANVGMASFAAAAMGFRVLAFEPVFENLQRICDGIYLNRV
Sbjct: 121 IQEVLEKMKGESRAGFVVDVGANVGMASFAAAAMGFRVLAFEPVFENLQRICDGIYLNRV 180

Query: 181 GELVNVFEAAASDKLGNITVHKLVGRLDNSAVSATGAKLAFKSNEEIAVQVKSIPLDEVI 240
           GELVNVFEAAASD+LGNITVHKLVGRLDNSAVSATGAKLAFKSNEEIAVQVKSIPLDEVI
Sbjct: 181 GELVNVFEAAASDRLGNITVHKLVGRLDNSAVSATGAKLAFKSNEEIAVQVKSIPLDEVI 240

Query: 241 PESERVLVIKIDVQGWEYHVLKGAKKILSRKGTEAPYLIYEEDERLLKASNSSSKEIREF 300
           P+SERVL+IKIDVQGWEYHVLKGAKK+LSRKGTEAPYLIYEEDERLLKASNSS +EIREF
Sbjct: 241 PDSERVLLIKIDVQGWEYHVLKGAKKLLSRKGTEAPYLIYEEDERLLKASNSSKREIREF 300

Query: 301 LHSVGYDHCTQHGTDAHCTKTG 323
           LH+VGY HCTQHGTDAHCTKTG
Sbjct: 301 LHTVGYHHCTQHGTDAHCTKTG 322

[Close]

BLAST of Carg10902-RA vs. ExPASy TrEMBL
Match: A0A0A0LKZ1 (Methyltransf_21 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G006220 PE=4 SV=1)

HSP 1 Score: 597.0 bits (1538), Expect = 4.5e-167
Identity = 299/322 (92.86%), Postives = 310/322 (96.27%), Query Frame = 0


Query: 1   MANAWKRDKAPKLLSPISLFFLFSFCILIIFFFLFGNSNPSEQSTPSFTIKPDFPFRSIS 60
           MANAWK+DK  KLLSP+ LFFLFSF ILIIFFFLF NS+ S QSTPSFTIKP FPFRSIS
Sbjct: 1   MANAWKKDKPHKLLSPVPLFFLFSFSILIIFFFLFNNSSSSHQSTPSFTIKPHFPFRSIS 60

Query: 61  PFDCFKCPQSFPVIANVVEGVRYPFLFSIADLGNLPDKPHKNIVRMLKGKPFRKPDISVT 120
           PFDCFKCPQS+PVIANVVEGVRYPFLFSIADLGNLPDKPHKNIVRMLKGKPFRKPDISVT
Sbjct: 61  PFDCFKCPQSYPVIANVVEGVRYPFLFSIADLGNLPDKPHKNIVRMLKGKPFRKPDISVT 120

Query: 121 IQEVLEKMKSDSRDGYVVDVGANVGMASFAAAAMGFRVLAFEPVFENLQRICDGIYLNRV 180
           IQEVLEKMK DS +G+VVDVGANVGMASFAAAAMGFRVLAFEPVFENLQRICDGIYLNRV
Sbjct: 121 IQEVLEKMKGDSGNGFVVDVGANVGMASFAAAAMGFRVLAFEPVFENLQRICDGIYLNRV 180

Query: 181 GELVNVFEAAASDKLGNITVHKLVGRLDNSAVSATGAKLAFKSNEEIAVQVKSIPLDEVI 240
           GELVNVFEAAASD+LGNITVHKLVGRLDNSAVSATGAKLAFKSNEEIAVQVKSIPLDEVI
Sbjct: 181 GELVNVFEAAASDRLGNITVHKLVGRLDNSAVSATGAKLAFKSNEEIAVQVKSIPLDEVI 240

Query: 241 PESERVLVIKIDVQGWEYHVLKGAKKILSRKGTEAPYLIYEEDERLLKASNSSSKEIREF 300
           P+SERVL+IKIDVQGWEYHVLKGAK ILSRKGTEAPYLIYEEDE+LLKASNSSS+EIREF
Sbjct: 241 PDSERVLLIKIDVQGWEYHVLKGAKGILSRKGTEAPYLIYEEDEKLLKASNSSSREIREF 300

Query: 301 LHSVGYDHCTQHGTDAHCTKTG 323
           LHSVGY HCTQHGTDAHCTKTG
Sbjct: 301 LHSVGYHHCTQHGTDAHCTKTG 322

[Close]

BLAST of Carg10902-RA vs. ExPASy TrEMBL
Match: A0A5A7V2W7 (FkbM family methyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00240 PE=4 SV=1)

HSP 1 Score: 595.1 bits (1533), Expect = 1.7e-166
Identity = 297/322 (92.24%), Postives = 310/322 (96.27%), Query Frame = 0


Query: 1   MANAWKRDKAPKLLSPISLFFLFSFCILIIFFFLFGNSNPSEQSTPSFTIKPDFPFRSIS 60
           MANAWKRDK  KLLSP+SLFFLFSF ILI+FFFLF NS+ S QSTP+FTIK  FPFRSIS
Sbjct: 1   MANAWKRDKPHKLLSPVSLFFLFSFSILIVFFFLFNNSSSSHQSTPNFTIKTHFPFRSIS 60

Query: 61  PFDCFKCPQSFPVIANVVEGVRYPFLFSIADLGNLPDKPHKNIVRMLKGKPFRKPDISVT 120
           PFDCFKCPQS+PVIANVVEGVRYPFLFSIADLGNLPDKPHKNIVRMLKGKPFRKPDISVT
Sbjct: 61  PFDCFKCPQSYPVIANVVEGVRYPFLFSIADLGNLPDKPHKNIVRMLKGKPFRKPDISVT 120

Query: 121 IQEVLEKMKSDSRDGYVVDVGANVGMASFAAAAMGFRVLAFEPVFENLQRICDGIYLNRV 180
           IQEVLEKMK DS +G+VVDVGANVGMASFAAAAMGFRVLAFEPVFENLQRICDGIYLNRV
Sbjct: 121 IQEVLEKMKGDSGNGFVVDVGANVGMASFAAAAMGFRVLAFEPVFENLQRICDGIYLNRV 180

Query: 181 GELVNVFEAAASDKLGNITVHKLVGRLDNSAVSATGAKLAFKSNEEIAVQVKSIPLDEVI 240
           GELVNVFEAAASD+LGNITVHKLVGRLDNSAVSA GAKLAFKSNEEIAVQVKSIPLDEVI
Sbjct: 181 GELVNVFEAAASDRLGNITVHKLVGRLDNSAVSAAGAKLAFKSNEEIAVQVKSIPLDEVI 240

Query: 241 PESERVLVIKIDVQGWEYHVLKGAKKILSRKGTEAPYLIYEEDERLLKASNSSSKEIREF 300
           P+SERVL+IKIDVQGWEYHVLKGAK+ILSRKGTEAPYLIYEEDE+LLKASNSSS+EIREF
Sbjct: 241 PDSERVLLIKIDVQGWEYHVLKGAKRILSRKGTEAPYLIYEEDEKLLKASNSSSREIREF 300

Query: 301 LHSVGYDHCTQHGTDAHCTKTG 323
           LHSVGY HCTQHGTDAHCTKTG
Sbjct: 301 LHSVGYHHCTQHGTDAHCTKTG 322

[Close]

BLAST of Carg10902-RA vs. TAIR 10
Match: AT2G26680.1 (CONTAINS InterPro DOMAIN/s: Methyltransferase FkbM (InterPro:IPR006342); Has 1073 Blast hits to 1073 proteins in 243 species: Archae - 45; Bacteria - 509; Metazoa - 0; Fungi - 4; Plants - 60; Viruses - 4; Other Eukaryotes - 451 (source: NCBI BLink). )

HSP 1 Score: 460.3 bits (1183), Expect = 1.3e-129
Identity = 234/322 (72.67%), Postives = 270/322 (83.85%), Query Frame = 0


Query: 1   MANAWKRDKAPKLLSPISLFFLFSFCILII--FFFLFGNSNPSEQSTPSFTIKPDFPFRS 60
           MA+AWK+DK  KLLSP +L  L    I+ +   FF F NS+  + S P+ +I   +P   
Sbjct: 1   MASAWKKDKNQKLLSPKTLISLLVLSIIFLSSLFFFFSNSS-LQYSNPNLSINSPYP--- 60

Query: 61  ISPFDCFKCPQSFPVIANVVEGVRYPFLFSIADLGNLPDKPHKNIVRMLKGKPFRKPDIS 120
           I PFDCFKCPQS P+IANVVE ++YPF++S+ADLGNLP+KPHKNIVR+LKGKPFRKPDIS
Sbjct: 61  IPPFDCFKCPQSKPIIANVVENLKYPFVYSLADLGNLPEKPHKNIVRLLKGKPFRKPDIS 120

Query: 121 VTIQEVLEKMKSDSRDGYVVDVGANVGMASFAAAAMGFRVLAFEPVFENLQRICDGIYLN 180
            TIQEVL+ M++  ++G VVDVGANVGMASFAAA MGF+VLAFEPVFENLQRICDGI+ N
Sbjct: 121 ATIQEVLDSMRASGKNGIVVDVGANVGMASFAAAVMGFKVLAFEPVFENLQRICDGIWFN 180

Query: 181 RVGELVNVFEAAASDKLGNITVHKLVGRLDNSAVSATGAKLAFKSNEEIAVQVKSIPLDE 240
           RV  LV VFEAAASD+ G+IT HKLVGRLDNSAVS  GA+LAFKSN+EIAVQVKSIPLD+
Sbjct: 181 RVASLVTVFEAAASDRTGDITFHKLVGRLDNSAVSEVGARLAFKSNKEIAVQVKSIPLDK 240

Query: 241 VIPESERVLVIKIDVQGWEYHVLKGAKKILSRKGTEAPYLIYEEDERLLKASNSSSKEIR 300
           +IP S+ VL+IKIDVQGWEYHVLKGAKK+LS K  EAPYLIYEEDERLL ASNSSSKEIR
Sbjct: 241 LIPPSQPVLLIKIDVQGWEYHVLKGAKKLLSGKPAEAPYLIYEEDERLLTASNSSSKEIR 300

Query: 301 EFLHSVGYDHCTQHGTDAHCTK 321
           +FL SVGY  C+QHGTDAHCTK
Sbjct: 301 DFLKSVGYSKCSQHGTDAHCTK 318

The following BLAST results are available for this feature:

BLAST of Carg10902-RA vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6599403.1	3.3e-180	100.00	hypothetical protein SDJN03_09181, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023521491.1	7.4e-180	99.69	uncharacterized protein LOC111785313 [Cucurbita pepo subsp. pepo] >XP_023547117....	[more]
XP_022946209.1	1.6e-179	99.38	uncharacterized protein LOC111450361 [Cucurbita moschata]	[more]
XP_022999168.1	2.8e-179	99.07	uncharacterized protein LOC111493632 [Cucurbita maxima]	[more]
XP_023522470.1	1.4e-170	95.36	uncharacterized protein LOC111786452 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg10902-RA vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg10902-RA vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G359	8.0e-180	99.38	uncharacterized protein LOC111450361 OS=Cucurbita moschata OX=3662 GN=LOC1114503...	[more]
A0A6J1KIU6	1.4e-179	99.07	uncharacterized protein LOC111493632 OS=Cucurbita maxima OX=3661 GN=LOC111493632...	[more]
A0A6J1CPM7	2.8e-169	93.17	uncharacterized protein LOC111013146 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]
A0A0A0LKZ1	4.5e-167	92.86	Methyltransf_21 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G00...	[more]
A0A5A7V2W7	1.7e-166	92.24	FkbM family methyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]

BLAST of Carg10902-RA vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G26680.1	1.3e-129	72.67	CONTAINS InterPro DOMAIN/s: Methyltransferase FkbM (InterPro:IPR006342); Has 107...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006342	Methyltransferase FkbM	PFAM	PF05050	Methyltransf_21	coord: 139..307 e-value: 5.0E-16 score: 59.2
IPR006342	Methyltransferase FkbM	TIGRFAM	TIGR01444	TIGR01444	coord: 137..271 e-value: 3.7E-30 score: 103.2
None	No IPR available	GENE3D	3.40.50.150	Vaccinia Virus protein VP39	coord: 123..319 e-value: 6.9E-30 score: 105.9
None	No IPR available	PANTHER	PTHR34203:SF13	EXPRESSED PROTEIN	coord: 1..320
None	No IPR available	PANTHER	PTHR34203	METHYLTRANSFERASE, FKBM FAMILY PROTEIN	coord: 1..320
IPR029063	S-adenosyl-L-methionine-dependent methyltransferase	SUPERFAMILY	53335	S-adenosyl-L-methionine-dependent methyltransferases	coord: 102..315

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg10902	Carg10902	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg10902-RA:2	Carg10902-RA:2	exon
Carg10902-RA:1	Carg10902-RA:1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg10902-RA:cds	Carg10902-RA:cds_2	CDS
Carg10902-RA:cds	Carg10902-RA:cds	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg10902-RA	Carg10902-RA-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032259	methylation
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005643	nuclear pore
molecular_function	GO:0008168	methyltransferase activity