Carg10898-RA (mRNA) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg10898-RA
Type	mRNA
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Signal peptidase I
Location	Carg_Chr05: 11458454 .. 11462253 (+)
Sequence length	644
RNA-Seq Expression	Carg10898-RA
Synteny	Carg10898-RA

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAGACCATCGAGTCTTTCAAATCCATCAAAATCAGGAAGGTTCTATCTCAGGCCGTCAGTTTTGGTATGTAAATTCAATCTTTAACATTTTGTTTACATTTTGCTGTTCATGAAATGAGCAATCTGCTGGGAAGTATTCGTTTGATCTTTCTTGATGATTCAAATTGATGGGGGTTTTGAACTGTTCTTCATTGTATGATTCAAGAACTGCGAGTTATTTTTAGACATTGGTAGTATGAATTTTCCCATTTAGTTTCTATAATTTTGGTCTAATGTGTTTCAATGTCTCCAGAATTTAAATTTGTGATAGTTAACGAAACGATGGATGTGGAACGCATGATGAACAAATATATATGCTAGTTTGACATGATTTGGAGATCAATGGTTGAAAGAAACGAACAATTAGATAAAATACAGTATCACAATCTTTAAACTGGATAGGATTTTGACTTTTTCAGTTCTATTTTGTTTTATCCAACTTACTCCTTTCTCCCAATCTCTATTTGTCCCGTCGTGTTAAATAGATACGTCCTTTCATGATTGTAACATTGCTAATGGTGAAAGTGTATAGAATCAAGGTGAAAGTGGTATAGAACGGTGAGATCCACGTTGATTGGAGAGAGGAACAAAGCATTCTTTATAAGGGTGTGGAAACTTCTACCTAATAGATGTGTTTTAAAATTGTGAGGCCGATGGCGATACGTAACGAGCCAAAGCGGACAATATCTACTAGCGGTAGGCTTGGGCTGTTACAAATGGTATCAGAGTTAGACACCGCGCGGTGTGCCAGTGAGGACACTAGCACCCAAGGGGGTGGATTGTGGGATCCCACCTTGACCGGAGAGTGGAACGAAGCATTCCTTATAAAAGTGTGGAAACCTCTCCTTAGTGGACGTGTTTTAAAATTGTGAGGCCGACGATGATATGTAACAGGCCAAAGCGGATAATATCTATTAGCAGTGGACTTGGGCTGTTACAAGAATCATCGTTTAAAATTTAGAGACGTAAATGATTTTTAAGCTTTAGAACTAATTAGACACTGAGTGTAAAAGTTAAGCAAAGTTCAAGCACTAAATTTATAGTTGTAGTTCGATTATTCTTCGTTTCATCCCTGAAAGGAACATACATCTAGTCATGTAGGAATGTAGAAGAATGATTTAGCTGCTTTGGTTTTTATATTCTAACTCCTTAGTCCTGGTATTCATCTGCAATATGTATTTTTCTTCTTCATTCCTTTACTCTAAGAACAATATCATAATGTATCAGGTTTGATCGTTTCAATGGCATCGATGATTTGGAAAGGGTTGATGTGCTGGACTGGCAGTGAGTCGCCTGTGGTGGTTGTGCTCTCTGAAAGTATGGAACCTGGTTTTGCTAGGGTGAGCTGATCCTCTAAGACAATCAACTTCATTCTCTTAAGTAGATTGGTCCTAACTCTTAGCCATGCATTTGAAATTTTAAAAATCAAGTGATCTATCAAATATATATTTGAAGTTTATGTCTAAGTTCAGAGACTAAATTTGTAACGGCTCAAAGCAAACAATATCTTCTAGCGGTAGGCTTGGGCTGTTACAAATGGTATCAGAGCTAGACACCGAGCGGTGCGCCTGCGAGGATGTTGGGCCCCTGAGGAGGGTGGATTGTGAGATTCCATATTGGTTGGAGAGAAGAATGAACCATTCCTTATAAAGGTGTGGAAACCTCTCTGTAACAGACGTGTTTTAAAACCTTGAGGGGAAGCCTAGAAGGGAAAGCCCAAAGAGACAATATTTGTTAGTGGGGGGCTTGGGCTGTTACAAATGATATTAGAGCCAGATACTGGACGGTGTGCCAACAAGGATGCTGGGCCTTTAAGAGGGGTGGATTGTGAGATCCCACATCAGTTGGAGAGGGGTACAGAGCATTCCTAATAAGAGCATGGAAACCTCTCTCTAGTAAACGCGTTTTAAAACCTTGAGGAGAAGCCTAAAAGGGAAAGCTCAAAGAAGACAATATATGCTAGCGGTGGTCTTAGGTCGTCACAAATCTCGAGGTTGAGTGACTAGATTTCCAATTTAACCTTCTATAGTGCTTCATATTCACCTAGCGCTGCTAGCATAGCATATCCGAGAATGCACAGTGGCCAAGCATAAATGGGGTAAGGCTTATGATAATTTTGTTATGGCTTCTTATGGGAGTTTTATCTGTTGCAGGGCGACATTCTCTTCCTCCACATGAATGAAGATCCAATTCGTGCAGGGGAGATCGTTGTGTATAAAATTGAGGTAAGTTTGCTCTCATGTTTCATGTACTGGTGTGATCATACATTTCTACACTGATTTTAGCTAGTTCTTGGATATAAAAGAATGTTTCATGTTTATATCTTCGGTTGTGTTTTATGAACCTCTTAACATCTAATCGTTCGAGTTCCTTGCCTAACATATCTTGCGTCGTATTCACATTAGTAAATCGTCTACTAATTTCCATTTGTAACATTTGCTAGGGACAGGTCATTCCAATCGTTCATCGTGTAATCAAGGTAACGTTTTTTTAACCAAGTTGGTAGTGGCTTAGCAGGAAACCATTCTTGTTCTTTAAAGCAAAACACATTTACATCAAATGTTATTGTTGTCAGGTCCACGAGACCAGAGATACAGGAGAGGTTTACATACTTACAAAAGGTACTTGAACTGAAACATGACAATAAATTGTTCTTGCTAAATGTTTGGCAATGAGCTTTGCTCGTTTCTTGTGTGTTAAATCTGCAGGTGACAATAATGAATTTGATGACATTCTACTGTACGCTAAGGATCAGCTTTGGTTGGAAAGACAACACTTAATGGGGAAAGCCATCGGGTAAATTCACAAGCCTCCGTGGTTGTACTGCCTGGGTGCCTCTTGAGGGTCGCCGCTTTACTTGTCTCGACATGAGGGTCACAACCTACTCTCTTCATAGTATGATTGTGATATTCTCCTCTACTTAACTTAATCATCGTCCTCAATGACTTTCTCGGGGCACAAACGCATCGTAGATTGTGACATTCTCCCCCACTTAGCTTAGTCATCGTCCTCGATGAATTTCTCGGGGCACAATCACATTGCGGATTGTGACATTCTCCCCCACTTAAATTAGTCATCGTCCTCAATGACTTTCTTGGACCACAATCGCATGCCTTCGTGGTTATATTGAGTGGGTGCCTCTAGAGGGTTGCCGCTTTACTTGTCTTGATGTGAGGGTCACAACCTACTCTCTTTATATTTATAGTATGGTTGTGACATTCTCTCCCACTTAAATTAGTCAGATTTTTTCTAGGCACAATTGCATCGCAGATTGTGACATTCTTTCCCACTTAACTTAGTCATCGTCCTCGATAACTGTCTCAGGGCTCAATTGCATGCGTTCGTGGTTGTACTTGTCATTATTTTTCCAAAGTCTTAACTATATTAAGCAATTTCATGTGTTGTTTAGAAATAAGGAAAGAAGATTTTTGTTTTTGTTTTGCAGTTTCTTGCCATATGTTGGATATGCAACAATTATCATGACAGACATGCCTATAATCAAGGTTTGAAATTTGACTTGAAAATAGAATGGAATGAAAGACTGATATTTTGTTGTTCACTAACTTTTATTTGTTGTTATTATTGGTATTGCAGTACATAACTATTGGTATAATGGGATTGCTGGTCTTAACCTCCAAGGACTAGTGAATATCAGAATGGCTTTACTCTTTTGATTATTACCCAATTTCAAAGGCAGGAAGCGTTTTGAGAATGGATTATTTCTTTTTCATATGGAAATCAAATATAGAAACAATTCAAT

mRNA sequence

AGAGACCATCGAGTCTTTCAAATCCATCAAAATCAGGAAGGTTCTATCTCAGGCCGTCAGTTTTGGTTTGATCGTTTCAATGGCATCGATGATTTGGAAAGGGTTGATGTGCTGGACTGGCAGTGAGTCGCCTGTGGTGGTTGTGCTCTCTGAAAGTATGGAACCTGGTTTTGCTAGGGGCGACATTCTCTTCCTCCACATGAATGAAGATCCAATTCGTGCAGGGGAGATCGTTGTGTATAAAATTGAGGGACAGGTCATTCCAATCGTTCATCGTGTAATCAAGGTCCACGAGACCAGAGATACAGGAGAGGTTTACATACTTACAAAAGGTGACAATAATGAATTTGATGACATTCTACTGTACGCTAAGGATCAGCTTTGGTTGGAAAGACAACACTTAATGGGGAAAGCCATCGGTTTCTTGCCATATGTTGGATATGCAACAATTATCATGACAGACATGCCTATAATCAAGTACATAACTATTGGTATAATGGGATTGCTGGTCTTAACCTCCAAGGACTAGTGAATATCAGAATGGCTTTACTCTTTTGATTATTACCCAATTTCAAAGGCAGGAAGCGTTTTGAGAATGGATTATTTCTTTTTCATATGGAAATCAAATATAGAAACAATTCAAT

Coding sequence (CDS)

ATGGCATCGATGATTTGGAAAGGGTTGATGTGCTGGACTGGCAGTGAGTCGCCTGTGGTGGTTGTGCTCTCTGAAAGTATGGAACCTGGTTTTGCTAGGGGCGACATTCTCTTCCTCCACATGAATGAAGATCCAATTCGTGCAGGGGAGATCGTTGTGTATAAAATTGAGGGACAGGTCATTCCAATCGTTCATCGTGTAATCAAGGTCCACGAGACCAGAGATACAGGAGAGGTTTACATACTTACAAAAGGTGACAATAATGAATTTGATGACATTCTACTGTACGCTAAGGATCAGCTTTGGTTGGAAAGACAACACTTAATGGGGAAAGCCATCGGTTTCTTGCCATATGTTGGATATGCAACAATTATCATGACAGACATGCCTATAATCAAGTACATAACTATTGGTATAATGGGATTGCTGGTCTTAACCTCCAAGGACTAG

Protein sequence

MASMIWKGLMCWTGSESPVVVVLSESMEPGFARGDILFLHMNEDPIRAGEIVVYKIEGQVIPIVHRVIKVHETRDTGEVYILTKGDNNEFDDILLYAKDQLWLERQHLMGKAIGFLPYVGYATIIMTDMPIIKYITIGIMGLLVLTSKD

Homology

[Close]

BLAST of Carg10898-RA vs. NCBI nr
Match: XP_022946214.1 (signal peptidase complex catalytic subunit SEC11C-like [Cucurbita moschata] >KAG6599407.1 Signal peptidase complex catalytic subunit SEC11C, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 301.6 bits (771), Expect = 3.8e-78
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 1   MASMIWKGLMCWTGSESPVVVVLSESMEPGFARGDILFLHMNEDPIRAGEIVVYKIEGQV 60
           MASMIWKGLMCWTGSESPVVVVLSESMEPGFARGDILFLHMNEDPIRAGEIVVYKIEGQV
Sbjct: 32  MASMIWKGLMCWTGSESPVVVVLSESMEPGFARGDILFLHMNEDPIRAGEIVVYKIEGQV 91

Query: 61  IPIVHRVIKVHETRDTGEVYILTKGDNNEFDDILLYAKDQLWLERQHLMGKAIGFLPYVG 120
           IPIVHRVIKVHETRDTGEVYILTKGDNNEFDDILLYAKDQLWLERQHLMGKAIGFLPYVG
Sbjct: 92  IPIVHRVIKVHETRDTGEVYILTKGDNNEFDDILLYAKDQLWLERQHLMGKAIGFLPYVG 151

Query: 121 YATIIMTDMPIIKYITIGIMGLLVLTSKD 150
           YATIIMTDMPIIKYITIGIMGLLVLTSKD
Sbjct: 152 YATIIMTDMPIIKYITIGIMGLLVLTSKD 180

[Close]

BLAST of Carg10898-RA vs. NCBI nr
Match: KAG7030394.1 (Signal peptidase complex catalytic subunit SEC11C [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 301.6 bits (771), Expect = 3.8e-78
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 1   MASMIWKGLMCWTGSESPVVVVLSESMEPGFARGDILFLHMNEDPIRAGEIVVYKIEGQV 60
           MASMIWKGLMCWTGSESPVVVVLSESMEPGFARGDILFLHMNEDPIRAGEIVVYKIEGQV
Sbjct: 1   MASMIWKGLMCWTGSESPVVVVLSESMEPGFARGDILFLHMNEDPIRAGEIVVYKIEGQV 60

Query: 61  IPIVHRVIKVHETRDTGEVYILTKGDNNEFDDILLYAKDQLWLERQHLMGKAIGFLPYVG 120
           IPIVHRVIKVHETRDTGEVYILTKGDNNEFDDILLYAKDQLWLERQHLMGKAIGFLPYVG
Sbjct: 61  IPIVHRVIKVHETRDTGEVYILTKGDNNEFDDILLYAKDQLWLERQHLMGKAIGFLPYVG 120

Query: 121 YATIIMTDMPIIKYITIGIMGLLVLTSKD 150
           YATIIMTDMPIIKYITIGIMGLLVLTSKD
Sbjct: 121 YATIIMTDMPIIKYITIGIMGLLVLTSKD 149

[Close]

BLAST of Carg10898-RA vs. NCBI nr
Match: XP_022999177.1 (signal peptidase complex catalytic subunit SEC11C-like [Cucurbita maxima])

HSP 1 Score: 301.2 bits (770), Expect = 4.9e-78
Identity = 148/149 (99.33%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 1   MASMIWKGLMCWTGSESPVVVVLSESMEPGFARGDILFLHMNEDPIRAGEIVVYKIEGQV 60
           MASMIWKGLMCWTGSESPVVVVLSESMEPGFARGDILFLHMNEDPIRAGEIVVYKIEGQV
Sbjct: 32  MASMIWKGLMCWTGSESPVVVVLSESMEPGFARGDILFLHMNEDPIRAGEIVVYKIEGQV 91

Query: 61  IPIVHRVIKVHETRDTGEVYILTKGDNNEFDDILLYAKDQLWLERQHLMGKAIGFLPYVG 120
           IPIVHRVIKVHETRDTGEVY+LTKGDNNEFDDILLYAKDQLWLERQHLMGKAIGFLPYVG
Sbjct: 92  IPIVHRVIKVHETRDTGEVYVLTKGDNNEFDDILLYAKDQLWLERQHLMGKAIGFLPYVG 151

Query: 121 YATIIMTDMPIIKYITIGIMGLLVLTSKD 150
           YATIIMTDMPIIKYITIGIMGLLVLTSKD
Sbjct: 152 YATIIMTDMPIIKYITIGIMGLLVLTSKD 180

[Close]

BLAST of Carg10898-RA vs. NCBI nr
Match: XP_023547052.1 (signal peptidase complex catalytic subunit SEC11C-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 299.7 bits (766), Expect = 1.4e-77
Identity = 147/149 (98.66%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 1   MASMIWKGLMCWTGSESPVVVVLSESMEPGFARGDILFLHMNEDPIRAGEIVVYKIEGQV 60
           MASMIWKGLMCWTGSESPVVVVLSESMEPGFARGDILFLHMNEDPIRAGEIVVYKIEGQV
Sbjct: 32  MASMIWKGLMCWTGSESPVVVVLSESMEPGFARGDILFLHMNEDPIRAGEIVVYKIEGQV 91

Query: 61  IPIVHRVIKVHETRDTGEVYILTKGDNNEFDDILLYAKDQLWLERQHLMGKAIGFLPYVG 120
           IPIVHRVIKVHETRDTGEVYILTKGDNNEFDDILLYAKDQLWLERQHLMGKA+GFLPYVG
Sbjct: 92  IPIVHRVIKVHETRDTGEVYILTKGDNNEFDDILLYAKDQLWLERQHLMGKAVGFLPYVG 151

Query: 121 YATIIMTDMPIIKYITIGIMGLLVLTSKD 150
           YATIIMT+MPIIKYITIGIMGLLVLTSKD
Sbjct: 152 YATIIMTEMPIIKYITIGIMGLLVLTSKD 180

[Close]

BLAST of Carg10898-RA vs. NCBI nr
Match: XP_008457703.1 (PREDICTED: signal peptidase complex catalytic subunit SEC11C-like [Cucumis melo] >KAA0061597.1 signal peptidase complex catalytic subunit SEC11C-like [Cucumis melo var. makuwa] >TYJ97806.1 signal peptidase complex catalytic subunit SEC11C-like [Cucumis melo var. makuwa])

HSP 1 Score: 263.5 bits (672), Expect = 1.1e-66
Identity = 127/148 (85.81%), Postives = 138/148 (93.24%), Query Frame = 0


Query: 2   ASMIWKGLMCWTGSESPVVVVLSESMEPGFARGDILFLHMNEDPIRAGEIVVYKIEGQVI 61
           A MIWKGL+CWTGS SPVVVVL+ SMEPGFARGDILFLHMN+DPIR GEIVVY IEG+ I
Sbjct: 33  ALMIWKGLICWTGSASPVVVVLTGSMEPGFARGDILFLHMNKDPIRTGEIVVYNIEGRDI 92

Query: 62  PIVHRVIKVHETRDTGEVYILTKGDNNEFDDILLYAKDQLWLERQHLMGKAIGFLPYVGY 121
           PIVHRVIKVHET+DTGEVY LTKGDNNE+DDI LYA++QLWL+RQHLMGKAIGFLPYVGY
Sbjct: 93  PIVHRVIKVHETKDTGEVYFLTKGDNNEYDDIPLYAENQLWLQRQHLMGKAIGFLPYVGY 152

Query: 122 ATIIMTDMPIIKYITIGIMGLLVLTSKD 150
           ATIIMTDMPIIKYI IG++GLLVLTS D
Sbjct: 153 ATIIMTDMPIIKYILIGVLGLLVLTSND 180

[Close]

BLAST of Carg10898-RA vs. ExPASy Swiss-Prot
Match: Q9WTR7 (Signal peptidase complex catalytic subunit SEC11C OS=Rattus norvegicus OX=10116 GN=Sec11c PE=2 SV=3)

HSP 1 Score: 183.7 bits (465), Expect = 1.5e-45
Identity = 94/149 (63.09%), Postives = 114/149 (76.51%), Query Frame = 0


Query: 2   ASMIWKGLMCWTGSESPVVVVLSESMEPGFARGDILFL-HMNEDPIRAGEIVVYKIEGQV 61
           A MIWKGL+  TGSESP+VVVLS SMEP F RGD+LFL +  EDPIRAGEIVV+K+EG+ 
Sbjct: 44  ALMIWKGLIVLTGSESPIVVVLSGSMEPAFHRGDLLFLTNFREDPIRAGEIVVFKVEGRD 103

Query: 62  IPIVHRVIKVHETRDTGEVYILTKGDNNEFDDILLYAKDQLWLERQHLMGKAIGFLPYVG 121
           IPIVHRVIKVHE +D G++  LTKGDNNE DD  LY + Q WLE++ ++G+A GFLPYVG
Sbjct: 104 IPIVHRVIKVHE-KDNGDIKFLTKGDNNEVDDRGLYKEGQNWLEKKDVVGRARGFLPYVG 163

Query: 122 YATIIMTDMPIIKYITIGIMGLLVLTSKD 150
             TIIM D P  KY  + +MG  VL  ++
Sbjct: 164 MVTIIMNDYPKFKYALVAVMGAYVLLKRE 191

[Close]

BLAST of Carg10898-RA vs. ExPASy Swiss-Prot
Match: P13679 (Signal peptidase complex catalytic subunit SEC11C OS=Canis lupus familiaris OX=9615 GN=SEC11C PE=1 SV=3)

HSP 1 Score: 183.3 bits (464), Expect = 2.0e-45
Identity = 94/149 (63.09%), Postives = 114/149 (76.51%), Query Frame = 0


Query: 2   ASMIWKGLMCWTGSESPVVVVLSESMEPGFARGDILFL-HMNEDPIRAGEIVVYKIEGQV 61
           A MIWKGL+  TGSESP+VVVLS SMEP F RGD+LFL +  EDPIRAGEIVV+K+EG+ 
Sbjct: 44  ALMIWKGLIVLTGSESPIVVVLSGSMEPAFHRGDLLFLTNFREDPIRAGEIVVFKVEGRD 103

Query: 62  IPIVHRVIKVHETRDTGEVYILTKGDNNEFDDILLYAKDQLWLERQHLMGKAIGFLPYVG 121
           IPIVHRVIKVHE +D G++  LTKGDNNE DD  LY + Q WLE++ ++G+A GFLPYVG
Sbjct: 104 IPIVHRVIKVHE-KDNGDIKFLTKGDNNEVDDRGLYKEGQNWLEKKDVVGRARGFLPYVG 163

Query: 122 YATIIMTDMPIIKYITIGIMGLLVLTSKD 150
             TIIM D P  KY  + +MG  VL  ++
Sbjct: 164 MVTIIMNDYPKFKYALLAVMGAYVLLKRE 191

[Close]

BLAST of Carg10898-RA vs. ExPASy Swiss-Prot
Match: Q9BY50 (Signal peptidase complex catalytic subunit SEC11C OS=Homo sapiens OX=9606 GN=SEC11C PE=1 SV=3)

HSP 1 Score: 183.3 bits (464), Expect = 2.0e-45
Identity = 94/149 (63.09%), Postives = 114/149 (76.51%), Query Frame = 0


Query: 2   ASMIWKGLMCWTGSESPVVVVLSESMEPGFARGDILFL-HMNEDPIRAGEIVVYKIEGQV 61
           A MIWKGL+  TGSESP+VVVLS SMEP F RGD+LFL +  EDPIRAGEIVV+K+EG+ 
Sbjct: 44  ALMIWKGLIVLTGSESPIVVVLSGSMEPAFHRGDLLFLTNFREDPIRAGEIVVFKVEGRD 103

Query: 62  IPIVHRVIKVHETRDTGEVYILTKGDNNEFDDILLYAKDQLWLERQHLMGKAIGFLPYVG 121
           IPIVHRVIKVHE +D G++  LTKGDNNE DD  LY + Q WLE++ ++G+A GFLPYVG
Sbjct: 104 IPIVHRVIKVHE-KDNGDIKFLTKGDNNEVDDRGLYKEGQNWLEKKDVVGRARGFLPYVG 163

Query: 122 YATIIMTDMPIIKYITIGIMGLLVLTSKD 150
             TIIM D P  KY  + +MG  VL  ++
Sbjct: 164 MVTIIMNDYPKFKYALLAVMGAYVLLKRE 191

[Close]

BLAST of Carg10898-RA vs. ExPASy Swiss-Prot
Match: Q9D8V7 (Signal peptidase complex catalytic subunit SEC11C OS=Mus musculus OX=10090 GN=Sec11c PE=1 SV=3)

HSP 1 Score: 183.3 bits (464), Expect = 2.0e-45
Identity = 94/149 (63.09%), Postives = 114/149 (76.51%), Query Frame = 0


Query: 2   ASMIWKGLMCWTGSESPVVVVLSESMEPGFARGDILFL-HMNEDPIRAGEIVVYKIEGQV 61
           A MIWKGL+  TGSESP+VVVLS SMEP F RGD+LFL +  EDPIRAGEIVV+K+EG+ 
Sbjct: 44  ALMIWKGLIVLTGSESPIVVVLSGSMEPAFHRGDLLFLTNFREDPIRAGEIVVFKVEGRD 103

Query: 62  IPIVHRVIKVHETRDTGEVYILTKGDNNEFDDILLYAKDQLWLERQHLMGKAIGFLPYVG 121
           IPIVHRVIKVHE +D G++  LTKGDNNE DD  LY + Q WLE++ ++G+A GFLPYVG
Sbjct: 104 IPIVHRVIKVHE-KDNGDIKFLTKGDNNEVDDRGLYKEGQNWLEKKDVVGRARGFLPYVG 163

Query: 122 YATIIMTDMPIIKYITIGIMGLLVLTSKD 150
             TIIM D P  KY  + +MG  VL  ++
Sbjct: 164 MVTIIMNDYPKFKYALLAVMGAYVLLKRE 191

[Close]

BLAST of Carg10898-RA vs. ExPASy Swiss-Prot
Match: Q5RC30 (Signal peptidase complex catalytic subunit SEC11C OS=Pongo abelii OX=9601 GN=SEC11C PE=2 SV=3)

HSP 1 Score: 183.3 bits (464), Expect = 2.0e-45
Identity = 94/149 (63.09%), Postives = 114/149 (76.51%), Query Frame = 0


Query: 2   ASMIWKGLMCWTGSESPVVVVLSESMEPGFARGDILFL-HMNEDPIRAGEIVVYKIEGQV 61
           A MIWKGL+  TGSESP+VVVLS SMEP F RGD+LFL +  EDPIRAGEIVV+K+EG+ 
Sbjct: 44  ALMIWKGLIVLTGSESPIVVVLSGSMEPAFHRGDLLFLTNFREDPIRAGEIVVFKVEGRD 103

Query: 62  IPIVHRVIKVHETRDTGEVYILTKGDNNEFDDILLYAKDQLWLERQHLMGKAIGFLPYVG 121
           IPIVHRVIKVHE +D G++  LTKGDNNE DD  LY + Q WLE++ ++G+A GFLPYVG
Sbjct: 104 IPIVHRVIKVHE-KDNGDIKFLTKGDNNEVDDRGLYKEGQNWLEKKDVVGRARGFLPYVG 163

Query: 122 YATIIMTDMPIIKYITIGIMGLLVLTSKD 150
             TIIM D P  KY  + +MG  VL  ++
Sbjct: 164 MVTIIMNDYPKFKYALLAVMGAYVLLKRE 191

[Close]

BLAST of Carg10898-RA vs. ExPASy TrEMBL
Match: A0A6J1G362 (Signal peptidase I OS=Cucurbita moschata OX=3662 GN=LOC111450367 PE=3 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 1.8e-78
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 1   MASMIWKGLMCWTGSESPVVVVLSESMEPGFARGDILFLHMNEDPIRAGEIVVYKIEGQV 60
           MASMIWKGLMCWTGSESPVVVVLSESMEPGFARGDILFLHMNEDPIRAGEIVVYKIEGQV
Sbjct: 32  MASMIWKGLMCWTGSESPVVVVLSESMEPGFARGDILFLHMNEDPIRAGEIVVYKIEGQV 91

Query: 61  IPIVHRVIKVHETRDTGEVYILTKGDNNEFDDILLYAKDQLWLERQHLMGKAIGFLPYVG 120
           IPIVHRVIKVHETRDTGEVYILTKGDNNEFDDILLYAKDQLWLERQHLMGKAIGFLPYVG
Sbjct: 92  IPIVHRVIKVHETRDTGEVYILTKGDNNEFDDILLYAKDQLWLERQHLMGKAIGFLPYVG 151

Query: 121 YATIIMTDMPIIKYITIGIMGLLVLTSKD 150
           YATIIMTDMPIIKYITIGIMGLLVLTSKD
Sbjct: 152 YATIIMTDMPIIKYITIGIMGLLVLTSKD 180

[Close]

BLAST of Carg10898-RA vs. ExPASy TrEMBL
Match: A0A6J1KA47 (Signal peptidase I OS=Cucurbita maxima OX=3661 GN=LOC111493638 PE=3 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 2.4e-78
Identity = 148/149 (99.33%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 1   MASMIWKGLMCWTGSESPVVVVLSESMEPGFARGDILFLHMNEDPIRAGEIVVYKIEGQV 60
           MASMIWKGLMCWTGSESPVVVVLSESMEPGFARGDILFLHMNEDPIRAGEIVVYKIEGQV
Sbjct: 32  MASMIWKGLMCWTGSESPVVVVLSESMEPGFARGDILFLHMNEDPIRAGEIVVYKIEGQV 91

Query: 61  IPIVHRVIKVHETRDTGEVYILTKGDNNEFDDILLYAKDQLWLERQHLMGKAIGFLPYVG 120
           IPIVHRVIKVHETRDTGEVY+LTKGDNNEFDDILLYAKDQLWLERQHLMGKAIGFLPYVG
Sbjct: 92  IPIVHRVIKVHETRDTGEVYVLTKGDNNEFDDILLYAKDQLWLERQHLMGKAIGFLPYVG 151

Query: 121 YATIIMTDMPIIKYITIGIMGLLVLTSKD 150
           YATIIMTDMPIIKYITIGIMGLLVLTSKD
Sbjct: 152 YATIIMTDMPIIKYITIGIMGLLVLTSKD 180

[Close]

BLAST of Carg10898-RA vs. ExPASy TrEMBL
Match: A0A5D3BFE4 (Signal peptidase I OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00160 PE=3 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 5.5e-67
Identity = 127/148 (85.81%), Postives = 138/148 (93.24%), Query Frame = 0


Query: 2   ASMIWKGLMCWTGSESPVVVVLSESMEPGFARGDILFLHMNEDPIRAGEIVVYKIEGQVI 61
           A MIWKGL+CWTGS SPVVVVL+ SMEPGFARGDILFLHMN+DPIR GEIVVY IEG+ I
Sbjct: 33  ALMIWKGLICWTGSASPVVVVLTGSMEPGFARGDILFLHMNKDPIRTGEIVVYNIEGRDI 92

Query: 62  PIVHRVIKVHETRDTGEVYILTKGDNNEFDDILLYAKDQLWLERQHLMGKAIGFLPYVGY 121
           PIVHRVIKVHET+DTGEVY LTKGDNNE+DDI LYA++QLWL+RQHLMGKAIGFLPYVGY
Sbjct: 93  PIVHRVIKVHETKDTGEVYFLTKGDNNEYDDIPLYAENQLWLQRQHLMGKAIGFLPYVGY 152

Query: 122 ATIIMTDMPIIKYITIGIMGLLVLTSKD 150
           ATIIMTDMPIIKYI IG++GLLVLTS D
Sbjct: 153 ATIIMTDMPIIKYILIGVLGLLVLTSND 180

[Close]

BLAST of Carg10898-RA vs. ExPASy TrEMBL
Match: A0A1S3C695 (Signal peptidase I OS=Cucumis melo OX=3656 GN=LOC103497334 PE=3 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 5.5e-67
Identity = 127/148 (85.81%), Postives = 138/148 (93.24%), Query Frame = 0


Query: 2   ASMIWKGLMCWTGSESPVVVVLSESMEPGFARGDILFLHMNEDPIRAGEIVVYKIEGQVI 61
           A MIWKGL+CWTGS SPVVVVL+ SMEPGFARGDILFLHMN+DPIR GEIVVY IEG+ I
Sbjct: 33  ALMIWKGLICWTGSASPVVVVLTGSMEPGFARGDILFLHMNKDPIRTGEIVVYNIEGRDI 92

Query: 62  PIVHRVIKVHETRDTGEVYILTKGDNNEFDDILLYAKDQLWLERQHLMGKAIGFLPYVGY 121
           PIVHRVIKVHET+DTGEVY LTKGDNNE+DDI LYA++QLWL+RQHLMGKAIGFLPYVGY
Sbjct: 93  PIVHRVIKVHETKDTGEVYFLTKGDNNEYDDIPLYAENQLWLQRQHLMGKAIGFLPYVGY 152

Query: 122 ATIIMTDMPIIKYITIGIMGLLVLTSKD 150
           ATIIMTDMPIIKYI IG++GLLVLTS D
Sbjct: 153 ATIIMTDMPIIKYILIGVLGLLVLTSND 180

[Close]

BLAST of Carg10898-RA vs. ExPASy TrEMBL
Match: A0A0A0LI13 (Signal peptidase I OS=Cucumis sativus OX=3659 GN=Csa_2G006150 PE=3 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 2.1e-66
Identity = 127/148 (85.81%), Postives = 137/148 (92.57%), Query Frame = 0


Query: 2   ASMIWKGLMCWTGSESPVVVVLSESMEPGFARGDILFLHMNEDPIRAGEIVVYKIEGQVI 61
           A MIWKGL+CWTGS SPVVVVL+ SMEPGFARGDILFLHMN+DPIR GEIVVY IEG+ I
Sbjct: 33  ALMIWKGLICWTGSVSPVVVVLTGSMEPGFARGDILFLHMNKDPIRTGEIVVYNIEGRDI 92

Query: 62  PIVHRVIKVHETRDTGEVYILTKGDNNEFDDILLYAKDQLWLERQHLMGKAIGFLPYVGY 121
           PIVHRVIKVHET+DTGEVY LTKGDNNE+DDI LYA++QLWL+RQHLMGKAIGFLPYVGY
Sbjct: 93  PIVHRVIKVHETKDTGEVYFLTKGDNNEYDDIPLYAENQLWLQRQHLMGKAIGFLPYVGY 152

Query: 122 ATIIMTDMPIIKYITIGIMGLLVLTSKD 150
           ATIIMTDMPIIKYI IG +GLLVLTS D
Sbjct: 153 ATIIMTDMPIIKYILIGALGLLVLTSND 180

[Close]

BLAST of Carg10898-RA vs. TAIR 10
Match: AT1G52600.1 (Peptidase S24/S26A/S26B/S26C family protein )

HSP 1 Score: 227.6 bits (579), Expect = 6.4e-60
Identity = 111/148 (75.00%), Postives = 128/148 (86.49%), Query Frame = 0


Query: 2   ASMIWKGLMCWTGSESPVVVVLSESMEPGFARGDILFLHMNEDPIRAGEIVVYKIEGQVI 61
           A +IWK LMC TGSESPVVVVLS SMEPGF RGDILFLHM++DPIRAGEIVV+ ++G+ I
Sbjct: 33  ALIIWKALMCVTGSESPVVVVLSGSMEPGFKRGDILFLHMSKDPIRAGEIVVFNVDGRDI 92

Query: 62  PIVHRVIKVHETRDTGEVYILTKGDNNEFDDILLYAKDQLWLERQHLMGKAIGFLPYVGY 121
           PIVHRVIKVHE  +TGEV +LTKGDNN  DD LLYA+ QLWL R H+MG+A+GFLPYVG+
Sbjct: 93  PIVHRVIKVHERENTGEVDVLTKGDNNYGDDRLLYAEGQLWLHRHHIMGRAVGFLPYVGW 152

Query: 122 ATIIMTDMPIIKYITIGIMGLLVLTSKD 150
            TIIMT+ PIIKYI IG +GLLV+TSKD
Sbjct: 153 VTIIMTEKPIIKYILIGALGLLVITSKD 180

[Close]

BLAST of Carg10898-RA vs. TAIR 10
Match: AT3G15710.1 (Peptidase S24/S26A/S26B/S26C family protein )

HSP 1 Score: 221.1 bits (562), Expect = 6.0e-58
Identity = 107/148 (72.30%), Postives = 125/148 (84.46%), Query Frame = 0


Query: 2   ASMIWKGLMCWTGSESPVVVVLSESMEPGFARGDILFLHMNEDPIRAGEIVVYKIEGQVI 61
           A +IWK L+C TGSESPVVVVLSESMEPGF RGDILFL M ++PIRAGEIVV+ ++G+ I
Sbjct: 33  ALIIWKALICVTGSESPVVVVLSESMEPGFQRGDILFLRMTDEPIRAGEIVVFSVDGREI 92

Query: 62  PIVHRVIKVHETRDTGEVYILTKGDNNEFDDILLYAKDQLWLERQHLMGKAIGFLPYVGY 121
           PIVHR IKVHE  DT  V +LTKGDNN+ DDI LYA+ QLWL R H+MG+A+GFLPYVG+
Sbjct: 93  PIVHRAIKVHERGDTKAVDVLTKGDNNDIDDIGLYAEGQLWLHRHHIMGRAVGFLPYVGW 152

Query: 122 ATIIMTDMPIIKYITIGIMGLLVLTSKD 150
            TIIMT+ PIIKYI IG +GLLV+TSKD
Sbjct: 153 VTIIMTEKPIIKYILIGALGLLVITSKD 180

The following BLAST results are available for this feature:

BLAST of Carg10898-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022946214.1	3.8e-78	100.00	signal peptidase complex catalytic subunit SEC11C-like [Cucurbita moschata] >KAG...	[more]
KAG7030394.1	3.8e-78	100.00	Signal peptidase complex catalytic subunit SEC11C [Cucurbita argyrosperma subsp....	[more]
XP_022999177.1	4.9e-78	99.33	signal peptidase complex catalytic subunit SEC11C-like [Cucurbita maxima]	[more]
XP_023547052.1	1.4e-77	98.66	signal peptidase complex catalytic subunit SEC11C-like [Cucurbita pepo subsp. pe...	[more]
XP_008457703.1	1.1e-66	85.81	PREDICTED: signal peptidase complex catalytic subunit SEC11C-like [Cucumis melo]...	[more]

BLAST of Carg10898-RA vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9WTR7	1.5e-45	63.09	Signal peptidase complex catalytic subunit SEC11C OS=Rattus norvegicus OX=10116 ...	[more]
P13679	2.0e-45	63.09	Signal peptidase complex catalytic subunit SEC11C OS=Canis lupus familiaris OX=9...	[more]
Q9BY50	2.0e-45	63.09	Signal peptidase complex catalytic subunit SEC11C OS=Homo sapiens OX=9606 GN=SEC...	[more]
Q9D8V7	2.0e-45	63.09	Signal peptidase complex catalytic subunit SEC11C OS=Mus musculus OX=10090 GN=Se...	[more]
Q5RC30	2.0e-45	63.09	Signal peptidase complex catalytic subunit SEC11C OS=Pongo abelii OX=9601 GN=SEC...	[more]

BLAST of Carg10898-RA vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G362	1.8e-78	100.00	Signal peptidase I OS=Cucurbita moschata OX=3662 GN=LOC111450367 PE=3 SV=1	[more]
A0A6J1KA47	2.4e-78	99.33	Signal peptidase I OS=Cucurbita maxima OX=3661 GN=LOC111493638 PE=3 SV=1	[more]
A0A5D3BFE4	5.5e-67	85.81	Signal peptidase I OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G0...	[more]
A0A1S3C695	5.5e-67	85.81	Signal peptidase I OS=Cucumis melo OX=3656 GN=LOC103497334 PE=3 SV=1	[more]
A0A0A0LI13	2.1e-66	85.81	Signal peptidase I OS=Cucumis sativus OX=3659 GN=Csa_2G006150 PE=3 SV=1	[more]

BLAST of Carg10898-RA vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G52600.1	6.4e-60	75.00	Peptidase S24/S26A/S26B/S26C family protein	[more]
AT3G15710.1	6.0e-58	72.30	Peptidase S24/S26A/S26B/S26C family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001733	Peptidase S26B	PRINTS	PR00728	SIGNALPTASE	coord: 81..92 score: 61.81 coord: 22..37 score: 62.5
IPR001733	Peptidase S26B	TIGRFAM	TIGR02228	TIGR02228	coord: 4..143 e-value: 4.9E-27 score: 92.7
IPR001733	Peptidase S26B	PANTHER	PTHR10806	SIGNAL PEPTIDASE COMPLEX CATALYTIC SUBUNIT SEC11	coord: 2..149
IPR015927	Peptidase S24/S26A/S26B/S26C	PFAM	PF00717	Peptidase_S24	coord: 10..97 e-value: 1.9E-11 score: 43.7
None	No IPR available	GENE3D	2.10.109.10	Umud Fragment, subunit A	coord: 12..116 e-value: 7.0E-7 score: 31.1
None	No IPR available	PANTHER	PTHR10806:SF23	SIGNAL PEPTIDASE I	coord: 2..149
None	No IPR available	CDD	cd06462	Peptidase_S24_S26	coord: 18..102 e-value: 1.10858E-15 score: 65.7482
IPR036286	LexA/Signal peptidase-like superfamily	SUPERFAMILY	51306	LexA/Signal peptidase	coord: 3..114

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg10898	Carg10898	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg10898-RA:8	Carg10898-RA:8	exon
Carg10898-RA:7	Carg10898-RA:7	exon
Carg10898-RA:6	Carg10898-RA:6	exon
Carg10898-RA:5	Carg10898-RA:5	exon
Carg10898-RA:4	Carg10898-RA:4	exon
Carg10898-RA:3	Carg10898-RA:3	exon
Carg10898-RA:2	Carg10898-RA:2	exon
Carg10898-RA:1	Carg10898-RA:1	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg10898-RA:five_prime_utr	Carg10898-RA:five_prime_utr	five_prime_UTR
Carg10898-RA:five_prime_utr	Carg10898-RA:five_prime_utr_2	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg10898-RA:cds	Carg10898-RA:cds	CDS
Carg10898-RA:cds	Carg10898-RA:cds_2	CDS
Carg10898-RA:cds	Carg10898-RA:cds_3	CDS
Carg10898-RA:cds	Carg10898-RA:cds_4	CDS
Carg10898-RA:cds	Carg10898-RA:cds_5	CDS
Carg10898-RA:cds	Carg10898-RA:cds_6	CDS
Carg10898-RA:cds	Carg10898-RA:cds_7	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg10898-RA:three_prime_utr	Carg10898-RA:three_prime_utr	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg10898-RA	Carg10898-RA-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006465	signal peptide processing
cellular_component	GO:0016020	membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005787	signal peptidase complex
molecular_function	GO:0008233	peptidase activity
molecular_function	GO:0004252	serine-type endopeptidase activity