Carg10866-RA (mRNA) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg10866-RA
Type	mRNA
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	heat stress transcription factor C-1-like
Location	Carg_Chr05: 11691056 .. 11692439 (+)
Sequence length	1068
RNA-Seq Expression	Carg10866-RA
Synteny	Carg10866-RA

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTCTGAGCATCAAATCCCTTTTTCTCTCACAAGCTTCCATTGAAGCGAAGCCCTATACTTTTCTCTCCTCTGTATATGGGATGGAGCCGAACCACCAACAAAACGACACCGTTGCGCCGTTCGTAATGAAAACTTACCAGATGGTCAACGATCCGATCACCGACGATTTAATCGCGTGGAGCAAAGCAAACAACAGCTTCATCGTCGCCGATCCTTTGGAACTCTCTCGCCGTATTCTTCCTTCTTACTTCAAACACAATAACTTCTCCAGTTTTGTTCGCCAGCTCAACACCTATGTAAGTCCAAATCCTTATCAATTCTTTCAAAAATTTCTATTTAGTCCTCCAATTTTCATCTCGATTACAAATTAAACCCCAAATCTAACCAAAATTTCAATTCCACCCCGTTTTAATTCAAGTGGGTAACTATTTTTTAAATTAAATTGTAAAAAAAAAAAAAAAACAATTTTTTTTTTTATGTATTTTAATGCAATTAAATTTTTTTTTTCCTATGTGGTTCATAGCATAATCCATGAAAATTTTAAATTATTTAAATTATTTAATTTTTTTTATATATAATTTATTATTATTATTTTTTTTTTGTCGGGGACAGGGATTCAAGAAGGTCGATCCCGACAAATGGGAATTCGCGAGCCAATGGTTTCTAAGAGATCAAAAGCATTTGCTGAAGAACATCACAAGAAGAAGACACAGCCGAAATCCACACATTCAAGTGAAGCGTGAAGACGACGGAGAATTAGCACTGGAAATTTCAAAGCTAAAACAAGAACAAATAGCTTTAGAAACCGAAGTCGAATCGATGAACAAGCGAATCGAGGCGACCGAAAAACGCCCGCAACAAATGATGTCCTTTCTGTACAAAATCATGGAAAATCCCGAAATTCTTCAAAGAATTCTCCTGCAGAACCGCCGCGTACGGCGGCGTGTGACCATGCGACCGCCTCCAAGTCCGGTCAAATTCGTGAAAGCCATGGAGGATGATTCGTCACCGGAGACTGGTGTTTTCGATGATAACGTCGCCTTGTCGTCGCCGGAGACTACCTTGTGGTGGAACGGCGGCGGCGGCGCTGACTCCGGCGGCGGATTTGGCGATTACATAGAGCTGTCGCCGCCTGAGAGTAATATTTCGGTTTACGAACTCGGCGACGGCCGAGATAGTGTCCTGGCGGAGCTGGTGGCCGGAGGAGGGTCGAGTTCGCCGCCGCCTTATCCGTTTTCGTTGTTTAGCGGTGGGTTTTAGGATAAATCCCCATCTTAATTTCGAATTAATTTTTTTTTTCCCTTTTTATGTATTATTTGTAGTGCGAATAGAGATGGGAAATTATGTTTTGCCGTCCGTATAACTGTATTTATATGTAAATG

mRNA sequence

ATTTCTGAGCATCAAATCCCTTTTTCTCTCACAAGCTTCCATTGAAGCGAAGCCCTATACTTTTCTCTCCTCTGTATATGGGATGGAGCCGAACCACCAACAAAACGACACCGTTGCGCCGTTCGTAATGAAAACTTACCAGATGGTCAACGATCCGATCACCGACGATTTAATCGCGTGGAGCAAAGCAAACAACAGCTTCATCGTCGCCGATCCTTTGGAACTCTCTCGCCGTATTCTTCCTTCTTACTTCAAACACAATAACTTCTCCAGTTTTGTTCGCCAGCTCAACACCTATGGATTCAAGAAGGTCGATCCCGACAAATGGGAATTCGCGAGCCAATGGTTTCTAAGAGATCAAAAGCATTTGCTGAAGAACATCACAAGAAGAAGACACAGCCGAAATCCACACATTCAAGTGAAGCGTGAAGACGACGGAGAATTAGCACTGGAAATTTCAAAGCTAAAACAAGAACAAATAGCTTTAGAAACCGAAGTCGAATCGATGAACAAGCGAATCGAGGCGACCGAAAAACGCCCGCAACAAATGATGTCCTTTCTGTACAAAATCATGGAAAATCCCGAAATTCTTCAAAGAATTCTCCTGCAGAACCGCCGCGTACGGCGGCGTGTGACCATGCGACCGCCTCCAAGTCCGGTCAAATTCGTGAAAGCCATGGAGGATGATTCGTCACCGGAGACTGGTGTTTTCGATGATAACGTCGCCTTGTCGTCGCCGGAGACTACCTTGTGGTGGAACGGCGGCGGCGGCGCTGACTCCGGCGGCGGATTTGGCGATTACATAGAGCTGTCGCCGCCTGAGAGTAATATTTCGGTTTACGAACTCGGCGACGGCCGAGATAGTGTCCTGGCGGAGCTGGTGGCCGGAGGAGGGTCGAGTTCGCCGCCGCCTTATCCGTTTTCGTTGTTTAGCGGTGGGTTTTAGGATAAATCCCCATCTTAATTTCGAATTAATTTTTTTTTTCCCTTTTTATGTATTATTTGTAGTGCGAATAGAGATGGGAAATTATGTTTTGCCGTCCGTATAACTGTATTTATATGTAAATG

Coding sequence (CDS)

ATGGAGCCGAACCACCAACAAAACGACACCGTTGCGCCGTTCGTAATGAAAACTTACCAGATGGTCAACGATCCGATCACCGACGATTTAATCGCGTGGAGCAAAGCAAACAACAGCTTCATCGTCGCCGATCCTTTGGAACTCTCTCGCCGTATTCTTCCTTCTTACTTCAAACACAATAACTTCTCCAGTTTTGTTCGCCAGCTCAACACCTATGGATTCAAGAAGGTCGATCCCGACAAATGGGAATTCGCGAGCCAATGGTTTCTAAGAGATCAAAAGCATTTGCTGAAGAACATCACAAGAAGAAGACACAGCCGAAATCCACACATTCAAGTGAAGCGTGAAGACGACGGAGAATTAGCACTGGAAATTTCAAAGCTAAAACAAGAACAAATAGCTTTAGAAACCGAAGTCGAATCGATGAACAAGCGAATCGAGGCGACCGAAAAACGCCCGCAACAAATGATGTCCTTTCTGTACAAAATCATGGAAAATCCCGAAATTCTTCAAAGAATTCTCCTGCAGAACCGCCGCGTACGGCGGCGTGTGACCATGCGACCGCCTCCAAGTCCGGTCAAATTCGTGAAAGCCATGGAGGATGATTCGTCACCGGAGACTGGTGTTTTCGATGATAACGTCGCCTTGTCGTCGCCGGAGACTACCTTGTGGTGGAACGGCGGCGGCGGCGCTGACTCCGGCGGCGGATTTGGCGATTACATAGAGCTGTCGCCGCCTGAGAGTAATATTTCGGTTTACGAACTCGGCGACGGCCGAGATAGTGTCCTGGCGGAGCTGGTGGCCGGAGGAGGGTCGAGTTCGCCGCCGCCTTATCCGTTTTCGTTGTTTAGCGGTGGGTTTTAG

Protein sequence

MEPNHQQNDTVAPFVMKTYQMVNDPITDDLIAWSKANNSFIVADPLELSRRILPSYFKHNNFSSFVRQLNTYGFKKVDPDKWEFASQWFLRDQKHLLKNITRRRHSRNPHIQVKREDDGELALEISKLKQEQIALETEVESMNKRIEATEKRPQQMMSFLYKIMENPEILQRILLQNRRVRRRVTMRPPPSPVKFVKAMEDDSSPETGVFDDNVALSSPETTLWWNGGGGADSGGGFGDYIELSPPESNISVYELGDGRDSVLAELVAGGGSSSPPPYPFSLFSGGF

Homology

[Close]

BLAST of Carg10866-RA vs. NCBI nr
Match: KAG7030426.1 (Heat stress transcription factor C-1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 573.9 bits (1478), Expect = 7.6e-160
Identity = 287/287 (100.00%), Postives = 287/287 (100.00%), Query Frame = 0


Query: 1   MEPNHQQNDTVAPFVMKTYQMVNDPITDDLIAWSKANNSFIVADPLELSRRILPSYFKHN 60
           MEPNHQQNDTVAPFVMKTYQMVNDPITDDLIAWSKANNSFIVADPLELSRRILPSYFKHN
Sbjct: 1   MEPNHQQNDTVAPFVMKTYQMVNDPITDDLIAWSKANNSFIVADPLELSRRILPSYFKHN 60

Query: 61  NFSSFVRQLNTYGFKKVDPDKWEFASQWFLRDQKHLLKNITRRRHSRNPHIQVKREDDGE 120
           NFSSFVRQLNTYGFKKVDPDKWEFASQWFLRDQKHLLKNITRRRHSRNPHIQVKREDDGE
Sbjct: 61  NFSSFVRQLNTYGFKKVDPDKWEFASQWFLRDQKHLLKNITRRRHSRNPHIQVKREDDGE 120

Query: 121 LALEISKLKQEQIALETEVESMNKRIEATEKRPQQMMSFLYKIMENPEILQRILLQNRRV 180
           LALEISKLKQEQIALETEVESMNKRIEATEKRPQQMMSFLYKIMENPEILQRILLQNRRV
Sbjct: 121 LALEISKLKQEQIALETEVESMNKRIEATEKRPQQMMSFLYKIMENPEILQRILLQNRRV 180

Query: 181 RRRVTMRPPPSPVKFVKAMEDDSSPETGVFDDNVALSSPETTLWWNGGGGADSGGGFGDY 240
           RRRVTMRPPPSPVKFVKAMEDDSSPETGVFDDNVALSSPETTLWWNGGGGADSGGGFGDY
Sbjct: 181 RRRVTMRPPPSPVKFVKAMEDDSSPETGVFDDNVALSSPETTLWWNGGGGADSGGGFGDY 240

Query: 241 IELSPPESNISVYELGDGRDSVLAELVAGGGSSSPPPYPFSLFSGGF 288
           IELSPPESNISVYELGDGRDSVLAELVAGGGSSSPPPYPFSLFSGGF
Sbjct: 241 IELSPPESNISVYELGDGRDSVLAELVAGGGSSSPPPYPFSLFSGGF 287

[Close]

BLAST of Carg10866-RA vs. NCBI nr
Match: KAG6599448.1 (Heat stress transcription factor C-1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 570.5 bits (1469), Expect = 8.4e-159
Identity = 286/287 (99.65%), Postives = 286/287 (99.65%), Query Frame = 0


Query: 1   MEPNHQQNDTVAPFVMKTYQMVNDPITDDLIAWSKANNSFIVADPLELSRRILPSYFKHN 60
           MEPNHQQNDTVAPFVMKTYQMVNDPITDDLIAWSKANNSFIVADPLELSRRILPSYFKHN
Sbjct: 1   MEPNHQQNDTVAPFVMKTYQMVNDPITDDLIAWSKANNSFIVADPLELSRRILPSYFKHN 60

Query: 61  NFSSFVRQLNTYGFKKVDPDKWEFASQWFLRDQKHLLKNITRRRHSRNPHIQVKREDDGE 120
           NFSSFVRQLNTYGFKKVDPDKWEFASQWFLRDQKHLLKNITRRRHSRNPHIQVKREDDGE
Sbjct: 61  NFSSFVRQLNTYGFKKVDPDKWEFASQWFLRDQKHLLKNITRRRHSRNPHIQVKREDDGE 120

Query: 121 LALEISKLKQEQIALETEVESMNKRIEATEKRPQQMMSFLYKIMENPEILQRILLQNRRV 180
           LALEISKLKQEQIALETEVESMNKRIEATEKRPQQMMSFLYKIMENPEILQRILLQNRRV
Sbjct: 121 LALEISKLKQEQIALETEVESMNKRIEATEKRPQQMMSFLYKIMENPEILQRILLQNRRV 180

Query: 181 RRRVTMRPPPSPVKFVKAMEDDSSPETGVFDDNVALSSPETTLWWNGGGGADSGGGFGDY 240
           RRRVTMRPPPSPVKFVKAMEDDSSPETGVFDDNVALSSPETTLWWNGGG ADSGGGFGDY
Sbjct: 181 RRRVTMRPPPSPVKFVKAMEDDSSPETGVFDDNVALSSPETTLWWNGGGCADSGGGFGDY 240

Query: 241 IELSPPESNISVYELGDGRDSVLAELVAGGGSSSPPPYPFSLFSGGF 288
           IELSPPESNISVYELGDGRDSVLAELVAGGGSSSPPPYPFSLFSGGF
Sbjct: 241 IELSPPESNISVYELGDGRDSVLAELVAGGGSSSPPPYPFSLFSGGF 287

[Close]

BLAST of Carg10866-RA vs. NCBI nr
Match: XP_023547324.1 (heat stress transcription factor C-1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 561.2 bits (1445), Expect = 5.1e-156
Identity = 284/287 (98.95%), Postives = 284/287 (98.95%), Query Frame = 0


Query: 1   MEPNHQQNDTVAPFVMKTYQMVNDPITDDLIAWSKANNSFIVADPLELSRRILPSYFKHN 60
           ME NHQQNDTVAPFVMKTYQMVNDPITDDLIAWSKANNSFIVADPLELSRRILPSYFKHN
Sbjct: 1   MESNHQQNDTVAPFVMKTYQMVNDPITDDLIAWSKANNSFIVADPLELSRRILPSYFKHN 60

Query: 61  NFSSFVRQLNTYGFKKVDPDKWEFASQWFLRDQKHLLKNITRRRHSRNPHIQVKREDDGE 120
           NFSSFVRQLNTYGFKKVDPDKWEFASQWFLRDQKHLLKNITRRRHSRN HIQVKREDDGE
Sbjct: 61  NFSSFVRQLNTYGFKKVDPDKWEFASQWFLRDQKHLLKNITRRRHSRNSHIQVKREDDGE 120

Query: 121 LALEISKLKQEQIALETEVESMNKRIEATEKRPQQMMSFLYKIMENPEILQRILLQNRRV 180
           LALEISKLKQEQIALETEVESMNKRIEATEKRPQQMMSFLYKIMENPEILQRILLQNRRV
Sbjct: 121 LALEISKLKQEQIALETEVESMNKRIEATEKRPQQMMSFLYKIMENPEILQRILLQNRRV 180

Query: 181 RRRVTMRPPPSPVKFVKAMEDDSSPETGVFDDNVALSSPETTLWWNGGGGADSGGGFGDY 240
           RRRVTMRPPPSPVKFVKAMEDDSSPETGVFDDNVALSSPETTLWWN GGGADSGGGFGDY
Sbjct: 181 RRRVTMRPPPSPVKFVKAMEDDSSPETGVFDDNVALSSPETTLWWN-GGGADSGGGFGDY 240

Query: 241 IELSPPESNISVYELGDGRDSVLAELVAGGGSSSPPPYPFSLFSGGF 288
           IELSPPESNISVYELGDGRDSVLAELVAGGGSSSPPPYPFSLFSGGF
Sbjct: 241 IELSPPESNISVYELGDGRDSVLAELVAGGGSSSPPPYPFSLFSGGF 286

[Close]

BLAST of Carg10866-RA vs. NCBI nr
Match: XP_022946805.1 (heat stress transcription factor C-1-like [Cucurbita moschata])

HSP 1 Score: 557.8 bits (1436), Expect = 5.6e-155
Identity = 283/287 (98.61%), Postives = 283/287 (98.61%), Query Frame = 0


Query: 1   MEPNHQQNDTVAPFVMKTYQMVNDPITDDLIAWSKANNSFIVADPLELSRRILPSYFKHN 60
           MEPNHQQNDTVAPFVMKTYQMVNDPITDDLIAWSKANNSFIVADPLELSRRILPSYFKHN
Sbjct: 1   MEPNHQQNDTVAPFVMKTYQMVNDPITDDLIAWSKANNSFIVADPLELSRRILPSYFKHN 60

Query: 61  NFSSFVRQLNTYGFKKVDPDKWEFASQWFLRDQKHLLKNITRRRHSRNPHIQVKREDDGE 120
           NFSSFVRQLNTYGFKKVDPDKWEFASQWFLRDQKHLLKNITRRRHSRN HIQVKREDDGE
Sbjct: 61  NFSSFVRQLNTYGFKKVDPDKWEFASQWFLRDQKHLLKNITRRRHSRNSHIQVKREDDGE 120

Query: 121 LALEISKLKQEQIALETEVESMNKRIEATEKRPQQMMSFLYKIMENPEILQRILLQNRRV 180
           LALEISKLKQEQIALETEVESMNKRIEATEKRPQQMMSFLYKIMENPEILQRILLQNRRV
Sbjct: 121 LALEISKLKQEQIALETEVESMNKRIEATEKRPQQMMSFLYKIMENPEILQRILLQNRRV 180

Query: 181 RRRVTMRPPPSPVKFVKAMEDDSSPETGVFDDNVALSSPETTLWWNGGGGADSGGGFGDY 240
           RRRVTMRPPPSPVKFVKAMEDDSSPETGVFDDNVALSSPETTLWWN GGGADSGGGFGDY
Sbjct: 181 RRRVTMRPPPSPVKFVKAMEDDSSPETGVFDDNVALSSPETTLWWN-GGGADSGGGFGDY 240

Query: 241 IELSPPESNISVYELGDGRDSVLAELVAGGGSSSPPPYPFSLFSGGF 288
           IELSPPESNISVYELGDGRDSVLAEL AGGGSSSP PYPFSLFSGGF
Sbjct: 241 IELSPPESNISVYELGDGRDSVLAELGAGGGSSSPLPYPFSLFSGGF 286

[Close]

BLAST of Carg10866-RA vs. NCBI nr
Match: XP_022999517.1 (heat stress transcription factor C-1-like [Cucurbita maxima])

HSP 1 Score: 541.2 bits (1393), Expect = 5.4e-150
Identity = 275/293 (93.86%), Postives = 281/293 (95.90%), Query Frame = 0


Query: 1   MEPNHQQNDTVAPFVMKTYQMVNDPITDDLIAWSKANNSFIVADPLELSRRILPSYFKHN 60
           ME NHQQNDTVAPFVMKTYQMVNDPITDDLIAWSKANNSFIVADPLELSRRILPSYFKHN
Sbjct: 1   MESNHQQNDTVAPFVMKTYQMVNDPITDDLIAWSKANNSFIVADPLELSRRILPSYFKHN 60

Query: 61  NFSSFVRQLNTYGFKKVDPDKWEFASQWFLRDQKHLLKNITRRRHSRNPHIQVKREDDGE 120
           NFSSFVRQLNTYGFKKVDPDKWEFASQWFLRDQKHLLKNI+RRRHSRN H QVKREDDGE
Sbjct: 61  NFSSFVRQLNTYGFKKVDPDKWEFASQWFLRDQKHLLKNISRRRHSRNLHFQVKREDDGE 120

Query: 121 LALEISKLKQEQIALETEVESMNKRIEATEKRPQQMMSFLYKIMENPEILQRILLQNRRV 180
           LA+EISKLK+EQIALETEVESMNKRIEATEKRPQQMMSFLYKIMENPEILQRILLQNRRV
Sbjct: 121 LAMEISKLKEEQIALETEVESMNKRIEATEKRPQQMMSFLYKIMENPEILQRILLQNRRV 180

Query: 181 RRRVTMRPPPSPVKFVKAMEDDSSPETGVFDDNVALSSPETTLWWNGGGG------ADSG 240
           RRRVTMRPPPSPVKFVKAMEDDSSPETGVFDDNVAL SPETTLWWNGG        +DSG
Sbjct: 181 RRRVTMRPPPSPVKFVKAMEDDSSPETGVFDDNVAL-SPETTLWWNGGSAVASSLTSDSG 240

Query: 241 GGFGDYIELSPPESNISVYELGDGRDSVLAELVAGGGSSSPPPYPFSLFSGGF 288
           GGFGDYIELSPPESNISVYELGDGR+SVLAE+VAGGGSSSPPPYPFSLFSGGF
Sbjct: 241 GGFGDYIELSPPESNISVYELGDGRESVLAEMVAGGGSSSPPPYPFSLFSGGF 292

[Close]

BLAST of Carg10866-RA vs. ExPASy Swiss-Prot
Match: Q9LV52 (Heat stress transcription factor C-1 OS=Arabidopsis thaliana OX=3702 GN=HSFC1 PE=1 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 1.2e-62
Identity = 152/328 (46.34%), Postives = 194/328 (59.15%), Query Frame = 0


Query: 4   NHQQNDTVAPFVMKTYQMVNDPITDDLIAWSKANNSFIVADPLELSRRILPSYFKHNNFS 63
           N+  N+ +APF++KTYQMVNDP TD LI W  A+NSFIV DPL+ S+RILP+YFKHNNFS
Sbjct: 8   NNNNNNVIAPFIVKTYQMVNDPSTDWLITWGPAHNSFIVVDPLDFSQRILPAYFKHNNFS 67

Query: 64  SFVRQLNTYGFKKVDPDKWEFASQWFLRDQKHLLKNITRRRHSRNPHIQVKREDDGELAL 123
           SFVRQLNTYGF+KVDPD+WEFA++ FLR QKHLL NI RR+H+R  + Q    +DGE+  
Sbjct: 68  SFVRQLNTYGFRKVDPDRWEFANEHFLRGQKHLLNNIARRKHARGMYGQ--DLEDGEIVR 127

Query: 124 EISKLKQEQIALETEVESMNKRIEATEKRPQQMMSFLYKIMENPEILQRILLQNRRV--- 183
           EI +LK+EQ  LE E++ MN+RIEATEKRP+QMM+FLYK++E+P++L R++L+  R    
Sbjct: 128 EIERLKEEQRELEAEIQRMNRRIEATEKRPEQMMAFLYKVVEDPDLLPRMMLEKERTKQQ 187

Query: 184 -------RRRVTMRPPPSPVKFVKAMEDDSSPETGVFDDNVALSSPETTLWWN----GGG 243
                  +RRVTM    S  + V   E+D      V   +    S    L+ N    G  
Sbjct: 188 QQVSDKKKRRVTMSTVKSEEEEV---EEDEGRVFRVMSSSTPSPSSTENLYRNHSPDGWI 247

Query: 244 GADSGGGFGDY------------IELSPPESNISVYEL--------GDGRDSVLAE---- 288
              + G FG Y               S   S  S + L        G G  S+  E    
Sbjct: 248 VPMTQGQFGSYETGLVAKSMLSNSTSSTSSSLTSTFSLPESVNGGGGGGCGSIQGERRYK 307

[Close]

BLAST of Carg10866-RA vs. ExPASy Swiss-Prot
Match: Q84T61 (Heat stress transcription factor A-1 OS=Oryza sativa subsp. japonica OX=39947 GN=HSFA1 PE=2 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 5.1e-42
Identity = 90/198 (45.45%), Postives = 126/198 (63.64%), Query Frame = 0


Query: 13  PFVMKTYQMVNDPITDDLIAWSKANNSFIVADPLELSRRILPSYFKHNNFSSFVRQLNTY 72
           PF+MKTY+MV+DP TD +++W   NNSF+V +  E +R +LP YFKH+NFSSFVRQLNTY
Sbjct: 37  PFLMKTYEMVDDPATDAVVSWGPGNNSFVVWNTPEFARDLLPKYFKHSNFSSFVRQLNTY 96

Query: 73  GFKKVDPDKWEFASQWFLRDQKHLLKNITRRR--HSRN---------------------- 132
           GF+KVDPD+WEFA++ FLR QKHLLK I RR+  H  N                      
Sbjct: 97  GFRKVDPDRWEFANEGFLRGQKHLLKTINRRKPTHGNNQVQQPQLPAAPVPACVEVGKFG 156

Query: 133 --PHIQVKREDDGELALEISKLKQEQIALETEVESMNKRIEATEKRPQQMMSFLYKIMEN 185
               I++ + D   L  E+ +L+Q+Q   + +++++ KR++  E+R QQMMSFL K M +
Sbjct: 157 MEEEIEMLKRDKNVLMQELVRLRQQQQTTDHQLQTLGKRLQGMEQRQQQMMSFLAKAMHS 216

[Close]

BLAST of Carg10866-RA vs. ExPASy Swiss-Prot
Match: Q6EUG4 (Heat stress transcription factor C-2a OS=Oryza sativa subsp. japonica OX=39947 GN=HSFC2A PE=2 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 1.9e-41
Identity = 108/299 (36.12%), Postives = 167/299 (55.85%), Query Frame = 0


Query: 11  VAPFVMKTYQMVNDPITDDLIAWSKANNSFIVADPLELSRRILPSYFKHNNFSSFVRQLN 70
           VAPFV KTY+MV+DP TD +IAW + +NSF+VADP   S+ +LP++FKH+NFSSFVRQLN
Sbjct: 12  VAPFVAKTYRMVDDPATDGVIAWGRDSNSFVVADPFAFSQTLLPAHFKHSNFSSFVRQLN 71

Query: 71  TYGFKKVDPDKWEFASQWFLRDQKHLLKNITRRRHSRNPHIQVKR--------------- 130
           TYGF+KVDPD+WEFA   FLR Q HLL+ I RR        + +                
Sbjct: 72  TYGFRKVDPDRWEFAHVSFLRGQTHLLRRIVRRSSGGGGAKRKEEAGGCGGGGEAAAGDV 131

Query: 131 -EDDGELALEISKLKQEQIALETEVESMNKRIEATEKRPQQMMSFLYKIMENPEILQRIL 190
            E+   +ALE+++L++EQ  +E  V +M +R++ TE+RP+QM++FL K++ +P++L+R++
Sbjct: 132 DEESAVVALEVARLRREQREIEGRVAAMWRRVQETERRPKQMLAFLVKVVGDPQVLRRLV 191

Query: 191 LQN--RRVRRRVTMRPPPSPVKFVKAMEDDSSPETGVFDDNVALSSPETTLWWNGGGGAD 250
            ++                 VK  + + D SS  T   D ++  ++ +   ++ GG G +
Sbjct: 192 DRDNTNAAASNADDSAVHHQVKRPRLLLDSSSTTTTHGDRHLVTAAADG--FYAGGCGPE 251

Query: 251 SGGGFG----DYIELSPPESNISVYELGDGRDSVLAELVAGGGSSSPPPYPFSLFSGGF 288
           +         D ++ +       +Y  GDG        V   G   PP Y F +   G+
Sbjct: 252 AAAAAAFVPDDAVDFT------GLYTGGDG----FGNAVVDAGVDYPPAYAFPVVDSGY 298

[Close]

BLAST of Carg10866-RA vs. ExPASy Swiss-Prot
Match: Q6VBB2 (Heat stress transcription factor A-2b OS=Oryza sativa subsp. japonica OX=39947 GN=HSFA2B PE=2 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 3.3e-41
Identity = 95/222 (42.79%), Postives = 137/222 (61.71%), Query Frame = 0


Query: 13  PFVMKTYQMVNDPITDDLIAWSKANNSFIVADPLELSRRILPSYFKHNNFSSFVRQLNTY 72
           PF+ KTY MV+D  TD  ++WS  +NSF+V DP   +  +LP +FKHNNFSSFVRQLNTY
Sbjct: 52  PFLTKTYDMVDDAGTDAAVSWSATSNSFVVWDPHAFATVLLPRFFKHNNFSSFVRQLNTY 111

Query: 73  GFKKVDPDKWEFASQWFLRDQKHLLKNITRRR---------HSRNPHIQV---------- 132
           GF+KVDPD+WEFA++ FLR Q+HLLKNI RR+          S  P+++V          
Sbjct: 112 GFRKVDPDRWEFANENFLRGQRHLLKNIKRRKPPSHTASNQQSLGPYLEVGHFGYDAEID 171

Query: 133 -KREDDGELALEISKLKQEQIALETEVESMNKRIEATEKRPQQMMSFLYKIMENPEILQR 192
             + D   L  E+ KL+QEQ   +  +++M  R++ TE+R QQMM+FL ++M+NPE L++
Sbjct: 172 RLKRDKQLLMAEVVKLRQEQQNTKANLKAMEDRLQGTEQRQQQMMAFLARVMKNPEFLKQ 231

Query: 193 ILLQN-----------RRVRRRVTMRPPPSPVKFVKAMEDDS 204
           ++ QN           ++ RRR+   P    V    ++E +S
Sbjct: 232 LMSQNEMRKELQDAISKKRRRRIDQGPEVDDVGTSSSIEQES 273

[Close]

BLAST of Carg10866-RA vs. ExPASy Swiss-Prot
Match: Q6F388 (Heat stress transcription factor A-2e OS=Oryza sativa subsp. japonica OX=39947 GN=HSFA2E PE=2 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 9.6e-41
Identity = 94/224 (41.96%), Postives = 135/224 (60.27%), Query Frame = 0


Query: 13  PFVMKTYQMVNDPITDDLIAWSKANNSFIVADPLELSRRILPSYFKHNNFSSFVRQLNTY 72
           PF+ KTY MV+DP TD +++WS  NNSF+V DP      +LP YFKHNNFSSFVRQLNTY
Sbjct: 38  PFLTKTYDMVDDPTTDAVVSWSATNNSFVVWDPHLFGNVLLPRYFKHNNFSSFVRQLNTY 97

Query: 73  GFKKVDPDKWEFASQWFLRDQKHLLKNITRRRHSRNP-------------------HIQV 132
           GF+KVDPDKWEFA++ FLR QKHLLK+I RR+   +                     I  
Sbjct: 98  GFRKVDPDKWEFANEGFLRGQKHLLKSIKRRKPPNSSPSQQSLGSFLEVGHFGYEGEIDQ 157

Query: 133 KREDDGELALEISKLKQEQIALETEVESMNKRIEATEKRPQQMMSFLYKIMENPEILQRI 192
            + D   L  E+ KL+QEQ   ++++++M ++++ TE++ Q MM+FL ++M NPE ++++
Sbjct: 158 LKRDKHLLMAEVVKLRQEQQNTKSDLQAMEQKLQGTEQKQQHMMAFLSRVMHNPEFIRQL 217

Query: 193 LLQ-----------NRRVRRRVTMRPPPSPVKFVKAMEDDSSPE 207
             Q           +++ RRR+   P       + +M   SSPE
Sbjct: 218 FSQSEMRKELEEFVSKKRRRRIDQGPE------LDSMGTGSSPE 255

[Close]

BLAST of Carg10866-RA vs. ExPASy TrEMBL
Match: A0A6J1G528 (heat stress transcription factor C-1-like OS=Cucurbita moschata OX=3662 GN=LOC111450760 PE=3 SV=1)

HSP 1 Score: 557.8 bits (1436), Expect = 2.7e-155
Identity = 283/287 (98.61%), Postives = 283/287 (98.61%), Query Frame = 0


Query: 1   MEPNHQQNDTVAPFVMKTYQMVNDPITDDLIAWSKANNSFIVADPLELSRRILPSYFKHN 60
           MEPNHQQNDTVAPFVMKTYQMVNDPITDDLIAWSKANNSFIVADPLELSRRILPSYFKHN
Sbjct: 1   MEPNHQQNDTVAPFVMKTYQMVNDPITDDLIAWSKANNSFIVADPLELSRRILPSYFKHN 60

Query: 61  NFSSFVRQLNTYGFKKVDPDKWEFASQWFLRDQKHLLKNITRRRHSRNPHIQVKREDDGE 120
           NFSSFVRQLNTYGFKKVDPDKWEFASQWFLRDQKHLLKNITRRRHSRN HIQVKREDDGE
Sbjct: 61  NFSSFVRQLNTYGFKKVDPDKWEFASQWFLRDQKHLLKNITRRRHSRNSHIQVKREDDGE 120

Query: 121 LALEISKLKQEQIALETEVESMNKRIEATEKRPQQMMSFLYKIMENPEILQRILLQNRRV 180
           LALEISKLKQEQIALETEVESMNKRIEATEKRPQQMMSFLYKIMENPEILQRILLQNRRV
Sbjct: 121 LALEISKLKQEQIALETEVESMNKRIEATEKRPQQMMSFLYKIMENPEILQRILLQNRRV 180

Query: 181 RRRVTMRPPPSPVKFVKAMEDDSSPETGVFDDNVALSSPETTLWWNGGGGADSGGGFGDY 240
           RRRVTMRPPPSPVKFVKAMEDDSSPETGVFDDNVALSSPETTLWWN GGGADSGGGFGDY
Sbjct: 181 RRRVTMRPPPSPVKFVKAMEDDSSPETGVFDDNVALSSPETTLWWN-GGGADSGGGFGDY 240

Query: 241 IELSPPESNISVYELGDGRDSVLAELVAGGGSSSPPPYPFSLFSGGF 288
           IELSPPESNISVYELGDGRDSVLAEL AGGGSSSP PYPFSLFSGGF
Sbjct: 241 IELSPPESNISVYELGDGRDSVLAELGAGGGSSSPLPYPFSLFSGGF 286

[Close]

BLAST of Carg10866-RA vs. ExPASy TrEMBL
Match: A0A6J1KB31 (heat stress transcription factor C-1-like OS=Cucurbita maxima OX=3661 GN=LOC111493852 PE=3 SV=1)

HSP 1 Score: 541.2 bits (1393), Expect = 2.6e-150
Identity = 275/293 (93.86%), Postives = 281/293 (95.90%), Query Frame = 0


Query: 1   MEPNHQQNDTVAPFVMKTYQMVNDPITDDLIAWSKANNSFIVADPLELSRRILPSYFKHN 60
           ME NHQQNDTVAPFVMKTYQMVNDPITDDLIAWSKANNSFIVADPLELSRRILPSYFKHN
Sbjct: 1   MESNHQQNDTVAPFVMKTYQMVNDPITDDLIAWSKANNSFIVADPLELSRRILPSYFKHN 60

Query: 61  NFSSFVRQLNTYGFKKVDPDKWEFASQWFLRDQKHLLKNITRRRHSRNPHIQVKREDDGE 120
           NFSSFVRQLNTYGFKKVDPDKWEFASQWFLRDQKHLLKNI+RRRHSRN H QVKREDDGE
Sbjct: 61  NFSSFVRQLNTYGFKKVDPDKWEFASQWFLRDQKHLLKNISRRRHSRNLHFQVKREDDGE 120

Query: 121 LALEISKLKQEQIALETEVESMNKRIEATEKRPQQMMSFLYKIMENPEILQRILLQNRRV 180
           LA+EISKLK+EQIALETEVESMNKRIEATEKRPQQMMSFLYKIMENPEILQRILLQNRRV
Sbjct: 121 LAMEISKLKEEQIALETEVESMNKRIEATEKRPQQMMSFLYKIMENPEILQRILLQNRRV 180

Query: 181 RRRVTMRPPPSPVKFVKAMEDDSSPETGVFDDNVALSSPETTLWWNGGGG------ADSG 240
           RRRVTMRPPPSPVKFVKAMEDDSSPETGVFDDNVAL SPETTLWWNGG        +DSG
Sbjct: 181 RRRVTMRPPPSPVKFVKAMEDDSSPETGVFDDNVAL-SPETTLWWNGGSAVASSLTSDSG 240

Query: 241 GGFGDYIELSPPESNISVYELGDGRDSVLAELVAGGGSSSPPPYPFSLFSGGF 288
           GGFGDYIELSPPESNISVYELGDGR+SVLAE+VAGGGSSSPPPYPFSLFSGGF
Sbjct: 241 GGFGDYIELSPPESNISVYELGDGRESVLAEMVAGGGSSSPPPYPFSLFSGGF 292

[Close]

BLAST of Carg10866-RA vs. ExPASy TrEMBL
Match: A0A0A0LHY0 (HSF_DOMAIN domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G004690 PE=3 SV=1)

HSP 1 Score: 434.9 bits (1117), Expect = 2.7e-118
Identity = 230/305 (75.41%), Postives = 249/305 (81.64%), Query Frame = 0


Query: 1   MEPNHQQNDTVAPFVMKTYQMVNDPITDDLIAWSKANNSFIVADPLELSRRILPSYFKHN 60
           ME N QQND VAPFVMKTY+MVNDP TDDLI WSK NNSF+VADPLELSRRILPSYFKHN
Sbjct: 1   MESN-QQNDAVAPFVMKTYEMVNDPSTDDLIGWSKGNNSFVVADPLELSRRILPSYFKHN 60

Query: 61  NFSSFVRQLNTYGFKKVDPDKWEFASQWFLRDQKHLLKNITRRRHSRNPHIQVK-REDDG 120
           NFSSFVRQLNTYGFKKVDPD+WEFASQWFLR QKHLLKNI RRRHSRN + Q K  +DDG
Sbjct: 61  NFSSFVRQLNTYGFKKVDPDQWEFASQWFLRGQKHLLKNICRRRHSRNSYFQTKYADDDG 120

Query: 121 ELALEISKLKQEQIALETEVESMNKRIEATEKRPQQMMSFLYKIMENPEILQRILLQNRR 180
           ELA+EISKLK+EQ ALE EVESMNKRIEATEKRPQQMM+FLYKIM+NPEIL RI++QN R
Sbjct: 121 ELAIEISKLKREQRALELEVESMNKRIEATEKRPQQMMAFLYKIMDNPEILPRIIIQNHR 180

Query: 181 V-------RRRVTMRPPPSP--VKFVKAMEDDSSPETGVFDDNVALSSPETTLWWNGGGG 240
           V       RRRV M PPPSP  VK  K  +DDSSPETGVF DN +LSSPETTLWW+G   
Sbjct: 181 VRRQLPSKRRRVVMPPPPSPTTVKVDKIPDDDSSPETGVFVDNASLSSPETTLWWDGAAS 240

Query: 241 A--------DSGGGFGDYIELSPPESNISVYELGDGRDSVLAELVAGGGSSSPPPYPFSL 288
           A        DSGGG  DYI LSPPES++S+Y +G   D  +AELVAGGGS  PPPYPFSL
Sbjct: 241 APVSSPLTSDSGGGLSDYISLSPPESDVSMYGIGGVGDCYMAELVAGGGSRPPPPYPFSL 300

[Close]

BLAST of Carg10866-RA vs. ExPASy TrEMBL
Match: A0A1S4DZ61 (heat stress transcription factor C-1-like OS=Cucumis melo OX=3656 GN=LOC103497786 PE=3 SV=1)

HSP 1 Score: 434.1 bits (1115), Expect = 4.5e-118
Identity = 227/304 (74.67%), Postives = 247/304 (81.25%), Query Frame = 0


Query: 1   MEPNHQQNDTVAPFVMKTYQMVNDPITDDLIAWSKANNSFIVADPLELSRRILPSYFKHN 60
           ME N QQND VAPFV+KTYQMV DP TDDLI WSK NNSFIVADPLELSRRILPSYFKHN
Sbjct: 1   MESN-QQNDAVAPFVLKTYQMVTDPTTDDLIGWSKGNNSFIVADPLELSRRILPSYFKHN 60

Query: 61  NFSSFVRQLNTYGFKKVDPDKWEFASQWFLRDQKHLLKNITRRRHSRNPHIQVK-REDDG 120
           NFSSFVRQLNTYGFKKVDPDKWEFASQWFLR QKHLLKNI RRRHSRN + Q K  +DDG
Sbjct: 61  NFSSFVRQLNTYGFKKVDPDKWEFASQWFLRGQKHLLKNICRRRHSRNSYFQTKCEDDDG 120

Query: 121 ELALEISKLKQEQIALETEVESMNKRIEATEKRPQQMMSFLYKIMENPEILQRILLQNRR 180
           E+A+EISKLKQEQ ALE EVESMNKRIEATEKRPQQMM+FL KIM+NPEIL RI+LQN R
Sbjct: 121 EIAIEISKLKQEQRALELEVESMNKRIEATEKRPQQMMAFLSKIMDNPEILPRIILQNHR 180

Query: 181 VRRRVTMR--------PPPSPVKFVKAMEDDSSPETGVFDDNVALSSPETTLWWNGGGGA 240
           VRR++  +        PPP+PVK    +E+DSSPE GVF DNVALSSPETTLWW+G   A
Sbjct: 181 VRRQLPSKRRRLVMPPPPPTPVKVESVLEEDSSPEPGVFVDNVALSSPETTLWWDGAASA 240

Query: 241 --------DSGGGFGDYIELSPPESNISVYELGDGRDSVLAELVAGGGSSSPPPYPFSLF 288
                   DSGGG  DYI LSPP+S++SVY +G  RD  +AELV GGGS  PPPYPFSLF
Sbjct: 241 PVSSPLTSDSGGGLSDYISLSPPDSDVSVYGIGGVRDGYMAELVDGGGSRPPPPYPFSLF 300

[Close]

BLAST of Carg10866-RA vs. ExPASy TrEMBL
Match: A0A5D3CJW8 (Heat stress transcription factor C-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G00250 PE=3 SV=1)

HSP 1 Score: 389.0 bits (998), Expect = 1.7e-104
Identity = 211/303 (69.64%), Postives = 228/303 (75.25%), Query Frame = 0


Query: 1   MEPNHQQNDTVAPFVMKTYQMVNDPITDDLIAWSKANNSFIVADPLELSRRILPSYFKHN 60
           ME N QQND VAPFV+KTYQMV DP TDDLI WSK NNSFIVADPLELSRRILPSYFKHN
Sbjct: 1   MESN-QQNDAVAPFVLKTYQMVTDPTTDDLIGWSKGNNSFIVADPLELSRRILPSYFKHN 60

Query: 61  NFSSFVRQLNTYGFKKVDPDKWEFASQWFLRDQKHLLKNITRRRHSRNPHIQVKREDDGE 120
           NFSSFVRQLNTYGFKKVDPDKWEFASQWFLRD                        DDGE
Sbjct: 61  NFSSFVRQLNTYGFKKVDPDKWEFASQWFLRD------------------------DDGE 120

Query: 121 LALEISKLKQEQIALETEVESMNKRIEATEKRPQQMMSFLYKIMENPEILQRILLQNRRV 180
           +A+EISKLKQEQ ALE EVESMNKRIEATEKRPQQMM+FL KIM+NPEIL RI+LQN RV
Sbjct: 121 IAIEISKLKQEQRALELEVESMNKRIEATEKRPQQMMAFLSKIMDNPEILPRIILQNHRV 180

Query: 181 -------RRRVTMRPP-PSPVKFVKAMEDDSSPETGVFDDNVALSSPETTLWWNGGGGA- 240
                  RRR+ M PP P+PVK    +E+DSSP+ GVF DNVALSSPETTLWW+G   A 
Sbjct: 181 RRQLPSKRRRLVMPPPSPTPVKVESVLEEDSSPDPGVFVDNVALSSPETTLWWDGAASAP 240

Query: 241 -------DSGGGFGDYIELSPPESNISVYELGDGRDSVLAELVAGGGSSSPPPYPFSLFS 288
                  DSGGG  DYI LSPP+S++SVY +G  RD  +AELV GGGS   PPYPFSLFS
Sbjct: 241 VSSPLTSDSGGGLSDYISLSPPDSDVSVYGIGGVRDGYMAELVDGGGSRPSPPYPFSLFS 278

[Close]

BLAST of Carg10866-RA vs. TAIR 10
Match: AT3G24520.1 (heat shock transcription factor C1 )

HSP 1 Score: 241.5 bits (615), Expect = 8.3e-64
Identity = 152/328 (46.34%), Postives = 194/328 (59.15%), Query Frame = 0


Query: 4   NHQQNDTVAPFVMKTYQMVNDPITDDLIAWSKANNSFIVADPLELSRRILPSYFKHNNFS 63
           N+  N+ +APF++KTYQMVNDP TD LI W  A+NSFIV DPL+ S+RILP+YFKHNNFS
Sbjct: 8   NNNNNNVIAPFIVKTYQMVNDPSTDWLITWGPAHNSFIVVDPLDFSQRILPAYFKHNNFS 67

Query: 64  SFVRQLNTYGFKKVDPDKWEFASQWFLRDQKHLLKNITRRRHSRNPHIQVKREDDGELAL 123
           SFVRQLNTYGF+KVDPD+WEFA++ FLR QKHLL NI RR+H+R  + Q    +DGE+  
Sbjct: 68  SFVRQLNTYGFRKVDPDRWEFANEHFLRGQKHLLNNIARRKHARGMYGQ--DLEDGEIVR 127

Query: 124 EISKLKQEQIALETEVESMNKRIEATEKRPQQMMSFLYKIMENPEILQRILLQNRRV--- 183
           EI +LK+EQ  LE E++ MN+RIEATEKRP+QMM+FLYK++E+P++L R++L+  R    
Sbjct: 128 EIERLKEEQRELEAEIQRMNRRIEATEKRPEQMMAFLYKVVEDPDLLPRMMLEKERTKQQ 187

Query: 184 -------RRRVTMRPPPSPVKFVKAMEDDSSPETGVFDDNVALSSPETTLWWN----GGG 243
                  +RRVTM    S  + V   E+D      V   +    S    L+ N    G  
Sbjct: 188 QQVSDKKKRRVTMSTVKSEEEEV---EEDEGRVFRVMSSSTPSPSSTENLYRNHSPDGWI 247

Query: 244 GADSGGGFGDY------------IELSPPESNISVYEL--------GDGRDSVLAE---- 288
              + G FG Y               S   S  S + L        G G  S+  E    
Sbjct: 248 VPMTQGQFGSYETGLVAKSMLSNSTSSTSSSLTSTFSLPESVNGGGGGGCGSIQGERRYK 307

[Close]

BLAST of Carg10866-RA vs. TAIR 10
Match: AT2G26150.1 (heat shock transcription factor A2 )

HSP 1 Score: 167.5 bits (423), Expect = 1.5e-41
Identity = 83/187 (44.39%), Postives = 121/187 (64.71%), Query Frame = 0


Query: 13  PFVMKTYQMVNDPITDDLIAWSKANNSFIVADPLELSRRILPSYFKHNNFSSFVRQLNTY 72
           PF+ KTY+MV DP TD +++WS   NSF+V D  + S  +LP YFKH+NFSSF+RQLNTY
Sbjct: 44  PFLTKTYEMVEDPATDTVVSWSNGRNSFVVWDSHKFSTTLLPRYFKHSNFSSFIRQLNTY 103

Query: 73  GFKKVDPDKWEFASQWFLRDQKHLLKNITRRR---------------------HSRNPHI 132
           GF+K+DPD+WEFA++ FL  QKHLLKNI RRR                     +  +  +
Sbjct: 104 GFRKIDPDRWEFANEGFLAGQKHLLKNIKRRRNMGLQNVNQQGSGMSCVEVGQYGFDGEV 163

Query: 133 QVKREDDGELALEISKLKQEQIALETEVESMNKRIEATEKRPQQMMSFLYKIMENPEILQ 179
           +  + D G L  E+ +L+Q+Q + +++V +M +R+  TEKR QQMM+FL K + NP  +Q
Sbjct: 164 ERLKRDHGVLVAEVVRLRQQQHSSKSQVAAMEQRLLVTEKRQQQMMTFLAKALNNPNFVQ 223

[Close]

BLAST of Carg10866-RA vs. TAIR 10
Match: AT4G17750.1 (heat shock factor 1 )

HSP 1 Score: 167.2 bits (422), Expect = 2.0e-41
Identity = 93/213 (43.66%), Postives = 123/213 (57.75%), Query Frame = 0


Query: 8   NDTVAPFVMKTYQMVNDPITDDLIAWSKANNSFIVADPLELSRRILPSYFKHNNFSSFVR 67
           N    PF+ KTY MV DP TD +++WS  NNSFIV DP E SR +LP YFKHNNFSSFVR
Sbjct: 47  NSLPPPFLSKTYDMVEDPATDAIVSWSPTNNSFIVWDPPEFSRDLLPKYFKHNNFSSFVR 106

Query: 68  QLNTYGFKKVDPDKWEFASQWFLRDQKHLLKNITRRR-------HSRNPHIQVKREDDGE 127
           QLNTYGF+KVDPD+WEFA++ FLR QKHLLK I+RR+        S NP  Q   +  G 
Sbjct: 107 QLNTYGFRKVDPDRWEFANEGFLRGQKHLLKKISRRKSVQGHGSSSSNPQSQQLSQGQGS 166

Query: 128 LAL----------------------------EISKLKQEQIALETEVESMNKRIEATEKR 186
           +A                             E+ KL+Q+Q   + +++ + K ++  E+R
Sbjct: 167 MAALSSCVEVGKFGLEEEVEQLKRDKNVLMQELVKLRQQQQTTDNKLQVLVKHLQVMEQR 226

[Close]

BLAST of Carg10866-RA vs. TAIR 10
Match: AT5G16820.1 (heat shock factor 3 )

HSP 1 Score: 165.2 bits (417), Expect = 7.5e-41
Identity = 83/195 (42.56%), Postives = 126/195 (64.62%), Query Frame = 0


Query: 9   DTVAPFVMKTYQMVNDPITDDLIAWSKANNSFIVADPLELSRRILPSYFKHNNFSSFVRQ 68
           ++V PF+ KTY MV+DP+T+++++WS  NNSF+V    E S+ +LP YFKHNNFSSFVRQ
Sbjct: 23  NSVPPFLSKTYDMVDDPLTNEVVSWSSGNNSFVVWSAPEFSKVLLPKYFKHNNFSSFVRQ 82

Query: 69  LNTYGFKKVDPDKWEFASQWFLRDQKHLLKNITRRRHSR--------------------- 128
           LNTYGF+KVDPD+WEFA++ FLR +K LLK+I RR+ S                      
Sbjct: 83  LNTYGFRKVDPDRWEFANEGFLRGRKQLLKSIVRRKPSHVQQNQQQTQVQSSSVGACVEV 142

Query: 129 -----NPHIQVKREDDGELALEISKLKQEQIALETEVESMNKRIEATEKRPQQMMSFLYK 178
                   ++  + D   L  E+ +L+Q+Q A E +++++ ++++  E+R QQMMSFL K
Sbjct: 143 GKFGIEEEVERLKRDKNVLMQELVRLRQQQQATENQLQNVGQKVQVMEQRQQQMMSFLAK 202

[Close]

BLAST of Carg10866-RA vs. TAIR 10
Match: AT5G16820.2 (heat shock factor 3 )

HSP 1 Score: 165.2 bits (417), Expect = 7.5e-41
Identity = 83/195 (42.56%), Postives = 126/195 (64.62%), Query Frame = 0


Query: 9   DTVAPFVMKTYQMVNDPITDDLIAWSKANNSFIVADPLELSRRILPSYFKHNNFSSFVRQ 68
           ++V PF+ KTY MV+DP+T+++++WS  NNSF+V    E S+ +LP YFKHNNFSSFVRQ
Sbjct: 23  NSVPPFLSKTYDMVDDPLTNEVVSWSSGNNSFVVWSAPEFSKVLLPKYFKHNNFSSFVRQ 82

Query: 69  LNTYGFKKVDPDKWEFASQWFLRDQKHLLKNITRRRHSR--------------------- 128
           LNTYGF+KVDPD+WEFA++ FLR +K LLK+I RR+ S                      
Sbjct: 83  LNTYGFRKVDPDRWEFANEGFLRGRKQLLKSIVRRKPSHVQQNQQQTQVQSSSVGACVEV 142

Query: 129 -----NPHIQVKREDDGELALEISKLKQEQIALETEVESMNKRIEATEKRPQQMMSFLYK 178
                   ++  + D   L  E+ +L+Q+Q A E +++++ ++++  E+R QQMMSFL K
Sbjct: 143 GKFGIEEEVERLKRDKNVLMQELVRLRQQQQATENQLQNVGQKVQVMEQRQQQMMSFLAK 202

The following BLAST results are available for this feature:

BLAST of Carg10866-RA vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7030426.1	7.6e-160	100.00	Heat stress transcription factor C-1 [Cucurbita argyrosperma subsp. argyrosperma...	[more]
KAG6599448.1	8.4e-159	99.65	Heat stress transcription factor C-1, partial [Cucurbita argyrosperma subsp. sor...	[more]
XP_023547324.1	5.1e-156	98.95	heat stress transcription factor C-1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022946805.1	5.6e-155	98.61	heat stress transcription factor C-1-like [Cucurbita moschata]	[more]
XP_022999517.1	5.4e-150	93.86	heat stress transcription factor C-1-like [Cucurbita maxima]	[more]

BLAST of Carg10866-RA vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LV52	1.2e-62	46.34	Heat stress transcription factor C-1 OS=Arabidopsis thaliana OX=3702 GN=HSFC1 PE...	[more]
Q84T61	5.1e-42	45.45	Heat stress transcription factor A-1 OS=Oryza sativa subsp. japonica OX=39947 GN...	[more]
Q6EUG4	1.9e-41	36.12	Heat stress transcription factor C-2a OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
Q6VBB2	3.3e-41	42.79	Heat stress transcription factor A-2b OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
Q6F388	9.6e-41	41.96	Heat stress transcription factor A-2e OS=Oryza sativa subsp. japonica OX=39947 G...	[more]

BLAST of Carg10866-RA vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G528	2.7e-155	98.61	heat stress transcription factor C-1-like OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1KB31	2.6e-150	93.86	heat stress transcription factor C-1-like OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A0A0LHY0	2.7e-118	75.41	HSF_DOMAIN domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G004690 ...	[more]
A0A1S4DZ61	4.5e-118	74.67	heat stress transcription factor C-1-like OS=Cucumis melo OX=3656 GN=LOC10349778...	[more]
A0A5D3CJW8	1.7e-104	69.64	Heat stress transcription factor C-1-like OS=Cucumis melo var. makuwa OX=1194695...	[more]

BLAST of Carg10866-RA vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G24520.1	8.3e-64	46.34	heat shock transcription factor C1	[more]
AT2G26150.1	1.5e-41	44.39	heat shock transcription factor A2	[more]
AT4G17750.1	2.0e-41	43.66	heat shock factor 1	[more]
AT5G16820.1	7.5e-41	42.56	heat shock factor 3	[more]
AT5G16820.2	7.5e-41	42.56	heat shock factor 3	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 125..152
None	No IPR available	PANTHER	PTHR10015:SF332	HEAT STRESS TRANSCRIPTION FACTOR C-1	coord: 12..219
IPR000232	Heat shock factor (HSF)-type, DNA-binding	PRINTS	PR00056	HSFDOMAIN	coord: 14..37 score: 42.38 coord: 65..77 score: 81.54 coord: 52..64 score: 75.16
IPR000232	Heat shock factor (HSF)-type, DNA-binding	SMART	SM00415	hsfneu3	coord: 10..103 e-value: 6.7E-50 score: 181.8
IPR000232	Heat shock factor (HSF)-type, DNA-binding	PFAM	PF00447	HSF_DNA-bind	coord: 14..103 e-value: 1.3E-30 score: 105.8
IPR000232	Heat shock factor (HSF)-type, DNA-binding	PROSITE	PS00434	HSF_DOMAIN	coord: 53..77
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 5..104 e-value: 3.7E-35 score: 122.5
IPR027725	Heat shock transcription factor family	PANTHER	PTHR10015	HEAT SHOCK TRANSCRIPTION FACTOR	coord: 12..219
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 11..103

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg10866	Carg10866	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg10866-RA:1	Carg10866-RA:1	exon
Carg10866-RA:2	Carg10866-RA:2	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg10866-RA:five_prime_utr	Carg10866-RA:five_prime_utr	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg10866-RA:cds	Carg10866-RA:cds	CDS
Carg10866-RA:cds	Carg10866-RA:cds_2	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg10866-RA:three_prime_utr	Carg10866-RA:three_prime_utr	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg10866-RA	Carg10866-RA-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0034605	cellular response to heat
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding