Carg10288-RA (mRNA) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg10288-RA
Type	mRNA
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	U3 small nucleolar ribonucleoprotein protein MPP10
Location	Carg_Chr10: 249013 .. 253027 (+)
Sequence length	1925
RNA-Seq Expression	Carg10288-RA
Synteny	Carg10288-RA

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGCTCAATGGAGGCGGAGAAAGTGGTTCTTCCTACCACTGAAGCTGGTCTTGATCCACTTCATTATCTCAAATCAACAGACCCACCTCTCTGGCTTGCTCCAAGCCCTTCCCTGTCTAAAGTTGCCCGCCTTGCCTCACAGAACTTATTTGCTATGCTGAAACCTTTCAGTCCTAAATCTCCATTTGATCATCTCCTGGTTGATGGATTCGATGCCGAGCAGATATGGCAACAAATTGACCTCCAATCCCAACCTCTTTTGGCAAGTATTCGCCGGGATTTGAAGCGGTTTGAGAAGAATCCTGAAGTAATTTCGAATCTGAAGGTGTCGTTGGAAGATAAGAAGAATGTTACTCAAGAGATGGCTATAGGGTCGGGGGAAGGCAGCGATGAATTTGAAGAGGATATAAAGGAGTTAGATGAGGAAGAAGACGAAGATGAGGAGGATGAGGATGAGGATGAAGAAGAGGACAGTGACGATGAAGAAGATGGAGACACTGAGGATGGAGAGAAGGAAGTGAGTGACGATGAAGTTGAGGGAGAAGATGGTAGTGGTGGGATTGAGGATGGATTTTTGAAATTAAAAGAGCTAGAGGAGTTTATGGAGGAGGATGAGGGAAGAGAATATGGCTTACAGAAGAAGACAGATGGTAAGAAGGGAAAGAAACAAAGGAAGACAGAAGAAGAATCCGAGGACAATGAAGATGATGAAGATGAAGATGATGAAGATGATGAGGTGAAGGCACATTGCTTAAACAAACTGATCCTCTCCAGAATTTGTTTGTTTTGCTATTAATGAGGGTTTATTGCTCATGATATTATTACTTGCTGCAGAATTTGTTAATTTAAGATGCTTGTTTTGGTAAAATTTAAAATTGGCTATTTTCTTCCCTTGTAGCTTGGGGAGTTGGACCTTCATGGTGAGGAGGATGAAGATTCTAGCAAACTGGAAAAGGCAAGGTATTAGGGCTCATTTGTTCTTCTATATGCTTGTAAATGACAAACTCCTTAAAGTGATGAAAGTACTTGATTTCCTTTTGCATAGTTTCACACTCATGCTACTAGTCTAGTTGGACTTATGGTTACTATCAAATGCGATGGATGACTCTGATATTAGTTGAAGTTTGTGTGCATTTGTACTTAAAGCGACAGTAATTAGTAACTGATTTTAGAACATCTCGTCTATATGGTTATGGAAAAAAAAAAAAATCTGAGGCTGTCTGGAAGGAGCCGGTTGATGAGATTTCTTAGTTACATTATTGTCTGCCAATAGGATCCTTTCATTTTTTCAGATTACACATTTTTGTTGTTTAGTTTTCCTTTTGTAGCAGACTGACCAACATCTCTACACTACACTATTGTAAAAATCTTTTCATTGCATCAATGTCGTTGTCGTTAATGTTTGATACCTCATGATCTCCTTGCCGGTGTAATTAAATGGCCATTCAACATCTCTTTATTTGCCTACATTAAAAAACTCAGCATATTGAGTTTTCACTACATTTTTTTTCAATAGACTTATTATAACTGAGAAAATCCTCAGAAACTGATCACGATCTTCAAGTTTTTCATGATAATTGTGATTTTTTAATAGTTTCAATAAGCTAAAGGATGTCTATTTTCACTTTAAAATATTAGCTTCCAATAGATGCGAATCGATTTTGTTTGCAGATACGAAGACTTTTTTGGTGCTAAAAAGAAGAATCATGGGAGAACAAAGTCTAAATTGACGAACGGATCAGAGTCTGAATTCTCAGATTCAGGTGATGAAGAGGAATATGATGATGAAGCACATGCAGAACGGGTGCATATCTTCCTCCACGACTTCAGCTGCATATTAAATTGATAGGCGCTCTTCTTCATGTGAATTCTCATTCTAGTTTCTAATTTTGAGTTGCATATACAGAAGTCTGAAAATCTTTCAACTCATCAAAAACAACTTAAGAAGCTTCAATCTGAAATAGAGATGATGGAGAAAGCAAACTTGGAGCCAAAAACGTGGACCATGCAAGGAGAGGTAAAGTCATCTTTTTATTGGTTCTCTTACTTTATACAAGATACGATCATTTCGAGCCACTTCAAGCTACAATTTCAATAATAGGTAACCGCTGCAAAAAGACCTAAGAATAGTGCTCTGGAAGTTGATCTAGATTTTGAGCACAATGTGAGACCACCACCAGTAATCACAGAAGAAGTTACAGCAACGTTGGAAGAGATGATCAAGAAAAGGATCCTTGAGGTAACTTTTTCTATCTAAAGAAAACTTCAATTCTTATAATTCTCATCACTTATAAAGAAAGGGTGTCTGACTAAGTGGCAATAGCCTAATCAAACCATATTCTTTTATAAAAGAAACGATTTATATTGATATGAAGAAAAATGGATACATGTTGAGCCAAGAGAACGAGACGTGGAAGTGCTTGATTTACAGTGGCCGTACTCATCTGCCGAGAATATTTGACCAGCATTGTCTTATGCTTTGCTTTCAGGGGCGTTTTGACGAAGTTCAGAAAGCACCTAAGCGACCTACTAAAGCACCCAGAGAAATCAAAGACTTGGTCAGTATTCTTTTATGAAAGTCTTTTGTATGTGCCTTTCACATTTATATATGTATATTCACTTGTAGTGTTTTTCTTGCTCAAGTAGTAACATTTTCTTATCTCTAAACAGGATGAGAATAAAAGCAAGAAAGGTCTTGGTGAACTATACGAGGTTTGTTTTTCTTCTAAAAAAGATGCATCATTAAGCGCACTCCCTTGCTGCCATGCCCGTCTCTTCCTACCGGATGTCTCTCGTTTAATTTGTTTCGATTTGAGGGGCCATTCTTCCAATTTTTTTGCAGGAAGAGTATGTTGAAAAGACTAATTTGGCTACTGCCCCATCCACATTCACGGATGAAGCAAAGAATGAGGTACACTTCATGAAGAGACAAGAAGAGTTTTTACTCGCATAATTTAACAATTCTATTGGTATTTATAGTATGATACTCTGATCAAACTATATTAAATTTGGATAGTTTGAAACATTTATAACCTTTCCTACTTCCTCCATAATTTCTTTTATTGATTTCCTTACCTTTACCTCAAATCAGGCGAGCATACTTTTCAAGAAACTTTGCTCCAAGCTGGATGCTCTTTCCCATTACCACTACGCACCGAAACCTGTATGCTTCTAATGAATTCTTTGAATTTTGGACTGATTGACCATCTATCAACCCATTTTCTCATCTACATGTCAATTCTTTACTTGTAAAGGTTATTGAGGATATGTCTATATCAGTGAATGTCCCTGCTCTTGCAATGGAAGAGGTAACTGCTCTTCTATCTCATATCCCGTTTGTACGTGTTTGTGTAGTTGAGTGCATGAGCTAAAGTATAATTCTGTTATGTGGTTAGGTTGCTCCCGTTGCTGTCTCGGATGCAGCGATGCTTGCTCCAGAGGAAGTTTTTTCAGGCAAAGGTGACATCAAAGAAGCAGCTGAACTTACACAATCCGACAGGAAGAGGAGGAGAGCCAGCAAGAAAAGGAAATATAAAGGTAAATGTGAGAAGAATAGATAGTAGGGCTCTTGAATCGTGTTGCCTACAGAGGAGTTTTCCCCATGTTTGTAATAATAATCTGCGAGTCTTACAGCTATGGTGGCCAAAAGAGACGCGAAGAAGGCAGCAAGCAATACTACAGTTCCAAAGCCCAATGAAGGTAATAATGTTTAGCATTTCAATGTCTTGTATTTATTTTCAAATATTGACTGACGCCCTAACTGTAACTATGCTCAAATTTTTAGGCCAATGAAGACTGTATTATTTTCATGATCATCCTGAGAGAAGGAAAAACTGGAAGGGAAAGGAATTGTCTACTTAATTTTGAGCAGCTGAGGATGAAATAGCTGAAGGATGGGGAGTTGTTCCTTATTTGTTTTCACTTGTGGCTTCCAAGGAAAGTATTATATTGGTAGAGGTTGAAAGAAGGCGATCCTCAGTGATAGGTGATTTTTATACACACCCCTTTCCATCATA

mRNA sequence

AGCTCAATGGAGGCGGAGAAAGTGGTTCTTCCTACCACTGAAGCTGGTCTTGATCCACTTCATTATCTCAAATCAACAGACCCACCTCTCTGGCTTGCTCCAAGCCCTTCCCTGTCTAAAGTTGCCCGCCTTGCCTCACAGAACTTATTTGCTATGCTGAAACCTTTCAGTCCTAAATCTCCATTTGATCATCTCCTGGTTGATGGATTCGATGCCGAGCAGATATGGCAACAAATTGACCTCCAATCCCAACCTCTTTTGGCAAGTATTCGCCGGGATTTGAAGCGGTTTGAGAAGAATCCTGAAGTAATTTCGAATCTGAAGGTGTCGTTGGAAGATAAGAAGAATGTTACTCAAGAGATGGCTATAGGGTCGGGGGAAGGCAGCGATGAATTTGAAGAGGATATAAAGGAGTTAGATGAGGAAGAAGACGAAGATGAGGAGGATGAGGATGAGGATGAAGAAGAGGACAGTGACGATGAAGAAGATGGAGACACTGAGGATGGAGAGAAGGAAGTGAGTGACGATGAAGTTGAGGGAGAAGATGGTAGTGGTGGGATTGAGGATGGATTTTTGAAATTAAAAGAGCTAGAGGAGTTTATGGAGGAGGATGAGGGAAGAGAATATGGCTTACAGAAGAAGACAGATGGTAAGAAGGGAAAGAAACAAAGGAAGACAGAAGAAGAATCCGAGGACAATGAAGATGATGAAGATGAAGATGATGAAGATGATGAGCTTGGGGAGTTGGACCTTCATGGTGAGGAGGATGAAGATTCTAGCAAACTGGAAAAGGCAAGATACGAAGACTTTTTTGGTGCTAAAAAGAAGAATCATGGGAGAACAAAGTCTAAATTGACGAACGGATCAGAGTCTGAATTCTCAGATTCAGGTGATGAAGAGGAATATGATGATGAAGCACATGCAGAACGGAAGTCTGAAAATCTTTCAACTCATCAAAAACAACTTAAGAAGCTTCAATCTGAAATAGAGATGATGGAGAAAGCAAACTTGGAGCCAAAAACGTGGACCATGCAAGGAGAGGTAACCGCTGCAAAAAGACCTAAGAATAGTGCTCTGGAAGTTGATCTAGATTTTGAGCACAATGTGAGACCACCACCAGTAATCACAGAAGAAGTTACAGCAACGTTGGAAGAGATGATCAAGAAAAGGATCCTTGAGGGGCGTTTTGACGAAGTTCAGAAAGCACCTAAGCGACCTACTAAAGCACCCAGAGAAATCAAAGACTTGGATGAGAATAAAAGCAAGAAAGGTCTTGGTGAACTATACGAGGAAGAGTATGTTGAAAAGACTAATTTGGCTACTGCCCCATCCACATTCACGGATGAAGCAAAGAATGAGGCGAGCATACTTTTCAAGAAACTTTGCTCCAAGCTGGATGCTCTTTCCCATTACCACTACGCACCGAAACCTGTTATTGAGGATATGTCTATATCAGTGAATGTCCCTGCTCTTGCAATGGAAGAGGTTGCTCCCGTTGCTGTCTCGGATGCAGCGATGCTTGCTCCAGAGGAAGTTTTTTCAGGCAAAGGTGACATCAAAGAAGCAGCTGAACTTACACAATCCGACAGGAAGAGGAGGAGAGCCAGCAAGAAAAGGAAATATAAAGCTATGGTGGCCAAAAGAGACGCGAAGAAGGCAGCAAGCAATACTACAGTTCCAAAGCCCAATGAAGGCCAATGAAGACTGTATTATTTTCATGATCATCCTGAGAGAAGGAAAAACTGGAAGGGAAAGGAATTGTCTACTTAATTTTGAGCAGCTGAGGATGAAATAGCTGAAGGATGGGGAGTTGTTCCTTATTTGTTTTCACTTGTGGCTTCCAAGGAAAGTATTATATTGGTAGAGGTTGAAAGAAGGCGATCCTCAGTGATAGGTGATTTTTATACACACCCCTTTCCATCATA

Coding sequence (CDS)

AGCTCAATGGAGGCGGAGAAAGTGGTTCTTCCTACCACTGAAGCTGGTCTTGATCCACTTCATTATCTCAAATCAACAGACCCACCTCTCTGGCTTGCTCCAAGCCCTTCCCTGTCTAAAGTTGCCCGCCTTGCCTCACAGAACTTATTTGCTATGCTGAAACCTTTCAGTCCTAAATCTCCATTTGATCATCTCCTGGTTGATGGATTCGATGCCGAGCAGATATGGCAACAAATTGACCTCCAATCCCAACCTCTTTTGGCAAGTATTCGCCGGGATTTGAAGCGGTTTGAGAAGAATCCTGAAGTAATTTCGAATCTGAAGGTGTCGTTGGAAGATAAGAAGAATGTTACTCAAGAGATGGCTATAGGGTCGGGGGAAGGCAGCGATGAATTTGAAGAGGATATAAAGGAGTTAGATGAGGAAGAAGACGAAGATGAGGAGGATGAGGATGAGGATGAAGAAGAGGACAGTGACGATGAAGAAGATGGAGACACTGAGGATGGAGAGAAGGAAGTGAGTGACGATGAAGTTGAGGGAGAAGATGGTAGTGGTGGGATTGAGGATGGATTTTTGAAATTAAAAGAGCTAGAGGAGTTTATGGAGGAGGATGAGGGAAGAGAATATGGCTTACAGAAGAAGACAGATGGTAAGAAGGGAAAGAAACAAAGGAAGACAGAAGAAGAATCCGAGGACAATGAAGATGATGAAGATGAAGATGATGAAGATGATGAGCTTGGGGAGTTGGACCTTCATGGTGAGGAGGATGAAGATTCTAGCAAACTGGAAAAGGCAAGATACGAAGACTTTTTTGGTGCTAAAAAGAAGAATCATGGGAGAACAAAGTCTAAATTGACGAACGGATCAGAGTCTGAATTCTCAGATTCAGGTGATGAAGAGGAATATGATGATGAAGCACATGCAGAACGGAAGTCTGAAAATCTTTCAACTCATCAAAAACAACTTAAGAAGCTTCAATCTGAAATAGAGATGATGGAGAAAGCAAACTTGGAGCCAAAAACGTGGACCATGCAAGGAGAGGTAACCGCTGCAAAAAGACCTAAGAATAGTGCTCTGGAAGTTGATCTAGATTTTGAGCACAATGTGAGACCACCACCAGTAATCACAGAAGAAGTTACAGCAACGTTGGAAGAGATGATCAAGAAAAGGATCCTTGAGGGGCGTTTTGACGAAGTTCAGAAAGCACCTAAGCGACCTACTAAAGCACCCAGAGAAATCAAAGACTTGGATGAGAATAAAAGCAAGAAAGGTCTTGGTGAACTATACGAGGAAGAGTATGTTGAAAAGACTAATTTGGCTACTGCCCCATCCACATTCACGGATGAAGCAAAGAATGAGGCGAGCATACTTTTCAAGAAACTTTGCTCCAAGCTGGATGCTCTTTCCCATTACCACTACGCACCGAAACCTGTTATTGAGGATATGTCTATATCAGTGAATGTCCCTGCTCTTGCAATGGAAGAGGTTGCTCCCGTTGCTGTCTCGGATGCAGCGATGCTTGCTCCAGAGGAAGTTTTTTCAGGCAAAGGTGACATCAAAGAAGCAGCTGAACTTACACAATCCGACAGGAAGAGGAGGAGAGCCAGCAAGAAAAGGAAATATAAAGCTATGGTGGCCAAAAGAGACGCGAAGAAGGCAGCAAGCAATACTACAGTTCCAAAGCCCAATGAAGGCCAATGA

Protein sequence

SSMEAEKVVLPTTEAGLDPLHYLKSTDPPLWLAPSPSLSKVARLASQNLFAMLKPFSPKSPFDHLLVDGFDAEQIWQQIDLQSQPLLASIRRDLKRFEKNPEVISNLKVSLEDKKNVTQEMAIGSGEGSDEFEEDIKELDEEEDEDEEDEDEDEEEDSDDEEDGDTEDGEKEVSDDEVEGEDGSGGIEDGFLKLKELEEFMEEDEGREYGLQKKTDGKKGKKQRKTEEESEDNEDDEDEDDEDDELGELDLHGEEDEDSSKLEKARYEDFFGAKKKNHGRTKSKLTNGSESEFSDSGDEEEYDDEAHAERKSENLSTHQKQLKKLQSEIEMMEKANLEPKTWTMQGEVTAAKRPKNSALEVDLDFEHNVRPPPVITEEVTATLEEMIKKRILEGRFDEVQKAPKRPTKAPREIKDLDENKSKKGLGELYEEEYVEKTNLATAPSTFTDEAKNEASILFKKLCSKLDALSHYHYAPKPVIEDMSISVNVPALAMEEVAPVAVSDAAMLAPEEVFSGKGDIKEAAELTQSDRKRRRASKKRKYKAMVAKRDAKKAASNTTVPKPNEGQ

Homology

[Close]

BLAST of Carg10288-RA vs. NCBI nr
Match: KAG7023070.1 (U3 small nucleolar ribonucleoprotein MPP10, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1013.8 bits (2620), Expect = 5.6e-292
Identity = 566/566 (100.00%), Postives = 566/566 (100.00%), Query Frame = 0


Query: 1   SSMEAEKVVLPTTEAGLDPLHYLKSTDPPLWLAPSPSLSKVARLASQNLFAMLKPFSPKS 60
           SSMEAEKVVLPTTEAGLDPLHYLKSTDPPLWLAPSPSLSKVARLASQNLFAMLKPFSPKS
Sbjct: 1   SSMEAEKVVLPTTEAGLDPLHYLKSTDPPLWLAPSPSLSKVARLASQNLFAMLKPFSPKS 60

Query: 61  PFDHLLVDGFDAEQIWQQIDLQSQPLLASIRRDLKRFEKNPEVISNLKVSLEDKKNVTQE 120
           PFDHLLVDGFDAEQIWQQIDLQSQPLLASIRRDLKRFEKNPEVISNLKVSLEDKKNVTQE
Sbjct: 61  PFDHLLVDGFDAEQIWQQIDLQSQPLLASIRRDLKRFEKNPEVISNLKVSLEDKKNVTQE 120

Query: 121 MAIGSGEGSDEFEEDIKELDEEEDEDEEDEDEDEEEDSDDEEDGDTEDGEKEVSDDEVEG 180
           MAIGSGEGSDEFEEDIKELDEEEDEDEEDEDEDEEEDSDDEEDGDTEDGEKEVSDDEVEG
Sbjct: 121 MAIGSGEGSDEFEEDIKELDEEEDEDEEDEDEDEEEDSDDEEDGDTEDGEKEVSDDEVEG 180

Query: 181 EDGSGGIEDGFLKLKELEEFMEEDEGREYGLQKKTDGKKGKKQRKTEEESEDNEDDEDED 240
           EDGSGGIEDGFLKLKELEEFMEEDEGREYGLQKKTDGKKGKKQRKTEEESEDNEDDEDED
Sbjct: 181 EDGSGGIEDGFLKLKELEEFMEEDEGREYGLQKKTDGKKGKKQRKTEEESEDNEDDEDED 240

Query: 241 DEDDELGELDLHGEEDEDSSKLEKARYEDFFGAKKKNHGRTKSKLTNGSESEFSDSGDEE 300
           DEDDELGELDLHGEEDEDSSKLEKARYEDFFGAKKKNHGRTKSKLTNGSESEFSDSGDEE
Sbjct: 241 DEDDELGELDLHGEEDEDSSKLEKARYEDFFGAKKKNHGRTKSKLTNGSESEFSDSGDEE 300

Query: 301 EYDDEAHAERKSENLSTHQKQLKKLQSEIEMMEKANLEPKTWTMQGEVTAAKRPKNSALE 360
           EYDDEAHAERKSENLSTHQKQLKKLQSEIEMMEKANLEPKTWTMQGEVTAAKRPKNSALE
Sbjct: 301 EYDDEAHAERKSENLSTHQKQLKKLQSEIEMMEKANLEPKTWTMQGEVTAAKRPKNSALE 360

Query: 361 VDLDFEHNVRPPPVITEEVTATLEEMIKKRILEGRFDEVQKAPKRPTKAPREIKDLDENK 420
           VDLDFEHNVRPPPVITEEVTATLEEMIKKRILEGRFDEVQKAPKRPTKAPREIKDLDENK
Sbjct: 361 VDLDFEHNVRPPPVITEEVTATLEEMIKKRILEGRFDEVQKAPKRPTKAPREIKDLDENK 420

Query: 421 SKKGLGELYEEEYVEKTNLATAPSTFTDEAKNEASILFKKLCSKLDALSHYHYAPKPVIE 480
           SKKGLGELYEEEYVEKTNLATAPSTFTDEAKNEASILFKKLCSKLDALSHYHYAPKPVIE
Sbjct: 421 SKKGLGELYEEEYVEKTNLATAPSTFTDEAKNEASILFKKLCSKLDALSHYHYAPKPVIE 480

Query: 481 DMSISVNVPALAMEEVAPVAVSDAAMLAPEEVFSGKGDIKEAAELTQSDRKRRRASKKRK 540
           DMSISVNVPALAMEEVAPVAVSDAAMLAPEEVFSGKGDIKEAAELTQSDRKRRRASKKRK
Sbjct: 481 DMSISVNVPALAMEEVAPVAVSDAAMLAPEEVFSGKGDIKEAAELTQSDRKRRRASKKRK 540

Query: 541 YKAMVAKRDAKKAASNTTVPKPNEGQ 567
           YKAMVAKRDAKKAASNTTVPKPNEGQ
Sbjct: 541 YKAMVAKRDAKKAASNTTVPKPNEGQ 566

[Close]

BLAST of Carg10288-RA vs. NCBI nr
Match: XP_023516481.1 (U3 small nucleolar ribonucleoprotein protein MPP10 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 993.8 bits (2568), Expect = 6.0e-286
Identity = 556/564 (98.58%), Postives = 560/564 (99.29%), Query Frame = 0


Query: 3   MEAEKVVLPTTEAGLDPLHYLKSTDPPLWLAPSPSLSKVARLASQNLFAMLKPFSPKSPF 62
           MEAEKVVLPTTEAGLDPLHYLKSTDPPLWLAPSPSLSKVARLASQNLFAMLKPFSPKSPF
Sbjct: 1   MEAEKVVLPTTEAGLDPLHYLKSTDPPLWLAPSPSLSKVARLASQNLFAMLKPFSPKSPF 60

Query: 63  DHLLVDGFDAEQIWQQIDLQSQPLLASIRRDLKRFEKNPEVISNLKVSLEDKKNVTQEMA 122
           DHLLVDGFDAEQIWQQIDLQSQPLLASIRRDLKRFEKNPE+ISNLKVSLEDKKNVTQEMA
Sbjct: 61  DHLLVDGFDAEQIWQQIDLQSQPLLASIRRDLKRFEKNPELISNLKVSLEDKKNVTQEMA 120

Query: 123 IGSGEGSDEFEEDIKELDEEEDEDEEDEDEDEEEDSDDEEDGDTEDGEKEVSDDEVEGED 182
           IGSGEGSDEFEEDIKELD+EEDEDE  EDEDEEEDSDDEEDGDTEDGEKEVSDDEVEGED
Sbjct: 121 IGSGEGSDEFEEDIKELDDEEDEDE--EDEDEEEDSDDEEDGDTEDGEKEVSDDEVEGED 180

Query: 183 GSGGIEDGFLKLKELEEFMEEDEGREYGLQKKTDGKKGKKQRKTEEESEDNEDDEDEDDE 242
           GSGGIEDGFLKLKELEEFMEEDEGREYGLQKKTDGKKGKKQRKTEEESED+EDDEDEDDE
Sbjct: 181 GSGGIEDGFLKLKELEEFMEEDEGREYGLQKKTDGKKGKKQRKTEEESEDDEDDEDEDDE 240

Query: 243 DDELGELDLHGEEDEDSSKLEKARYEDFFGAKKKNHGRTKSKLTNGSESEFSDSGDEEEY 302
           DDELGE DLHGEEDEDSSKLEKARYEDFFGAKKKNHGRTKSKLTNGSESEFSDSGDEEE 
Sbjct: 241 DDELGEFDLHGEEDEDSSKLEKARYEDFFGAKKKNHGRTKSKLTNGSESEFSDSGDEEED 300

Query: 303 DDEAHAERKSENLSTHQKQLKKLQSEIEMMEKANLEPKTWTMQGEVTAAKRPKNSALEVD 362
           DDEAHAERKSENLSTHQKQLKKLQSEIEMMEKANLEPKTWTMQGEVTAAKRPKNSALEVD
Sbjct: 301 DDEAHAERKSENLSTHQKQLKKLQSEIEMMEKANLEPKTWTMQGEVTAAKRPKNSALEVD 360

Query: 363 LDFEHNVRPPPVITEEVTATLEEMIKKRILEGRFDEVQKAPKRPTKAPREIKDLDENKSK 422
           LDFEHNVRPPPVITEEVTATLEEMIKKRILEGRFDEVQKAPKRPTKAPREIKDLDENKSK
Sbjct: 361 LDFEHNVRPPPVITEEVTATLEEMIKKRILEGRFDEVQKAPKRPTKAPREIKDLDENKSK 420

Query: 423 KGLGELYEEEYVEKTNLATAPSTFTDEAKNEASILFKKLCSKLDALSHYHYAPKPVIEDM 482
           KGLGELYEEEYVEKTNLATAPSTFTDEAKNEAS+LFKKLCSKLDALSHYHYAPKPVIEDM
Sbjct: 421 KGLGELYEEEYVEKTNLATAPSTFTDEAKNEASLLFKKLCSKLDALSHYHYAPKPVIEDM 480

Query: 483 SISVNVPALAMEEVAPVAVSDAAMLAPEEVFSGKGDIKEAAELTQSDRKRRRASKKRKYK 542
           SISVNVPALAMEEVAPVAVSDAAMLAPEEVFSGKGDIKEAAELTQSDRKRRRASKKRKYK
Sbjct: 481 SISVNVPALAMEEVAPVAVSDAAMLAPEEVFSGKGDIKEAAELTQSDRKRRRASKKRKYK 540

Query: 543 AMVAKRDAKKAASNTTVPKPNEGQ 567
           AMVAKRDAKKAASNTTVPKPNEGQ
Sbjct: 541 AMVAKRDAKKAASNTTVPKPNEGQ 562

[Close]

BLAST of Carg10288-RA vs. NCBI nr
Match: XP_022921447.1 (U3 small nucleolar ribonucleoprotein protein MPP10 [Cucurbita moschata] >XP_022921448.1 U3 small nucleolar ribonucleoprotein protein MPP10 [Cucurbita moschata])

HSP 1 Score: 973.0 bits (2514), Expect = 1.1e-279
Identity = 549/564 (97.34%), Postives = 552/564 (97.87%), Query Frame = 0


Query: 3   MEAEKVVLPTTEAGLDPLHYLKSTDPPLWLAPSPSLSKVARLASQNLFAMLKPFSPKSPF 62
           MEAEKVVLPTTEAGLDPLHYLKSTDPPLWLAPSPSLSKVARLAS NLFAMLKPFSPKSPF
Sbjct: 1   MEAEKVVLPTTEAGLDPLHYLKSTDPPLWLAPSPSLSKVARLASHNLFAMLKPFSPKSPF 60

Query: 63  DHLLVDGFDAEQIWQQIDLQSQPLLASIRRDLKRFEKNPEVISNLKVSLEDKKNVTQEMA 122
           DHLLVDGFDAEQIWQQIDLQSQPLLASIRRDLKRFEKNPEVISNLKVSLEDKKNV QEMA
Sbjct: 61  DHLLVDGFDAEQIWQQIDLQSQPLLASIRRDLKRFEKNPEVISNLKVSLEDKKNVIQEMA 120

Query: 123 IGSGEGSDEFEEDIKELDEEEDEDEEDEDEDEEEDSDDEEDGDTEDGEKEVSDDEVEGED 182
           IGSGEGSDEFEEDIKELD+E+DEDE  EDEDEEEDSDDEEDGDTE+GEKEVSD EVEGED
Sbjct: 121 IGSGEGSDEFEEDIKELDDEDDEDE--EDEDEEEDSDDEEDGDTEEGEKEVSDGEVEGED 180

Query: 183 GSGGIEDGFLKLKELEEFMEEDEGREYGLQKKTDGKKGKKQRKTEEESEDNEDDEDEDDE 242
           GSGGIEDGFLKLKELEEFMEEDEGREYGLQKKTDGKKGKKQRKTEEES   EDDEDEDDE
Sbjct: 181 GSGGIEDGFLKLKELEEFMEEDEGREYGLQKKTDGKKGKKQRKTEEES---EDDEDEDDE 240

Query: 243 DDELGELDLHGEEDEDSSKLEKARYEDFFGAKKKNHGRTKSKLTNGSESEFSDSGDEEEY 302
           DDELGE DLHGEED DSSKLEKARYEDFFGAKKKNHGRTKSKL NGSESEFSDSGDEEE 
Sbjct: 241 DDELGEFDLHGEEDGDSSKLEKARYEDFFGAKKKNHGRTKSKLRNGSESEFSDSGDEEED 300

Query: 303 DDEAHAERKSENLSTHQKQLKKLQSEIEMMEKANLEPKTWTMQGEVTAAKRPKNSALEVD 362
           DDEAHAERKSENLSTHQKQLKKLQSEIEMMEKANLEPKTWTMQGEVTAAKRPKNSALEVD
Sbjct: 301 DDEAHAERKSENLSTHQKQLKKLQSEIEMMEKANLEPKTWTMQGEVTAAKRPKNSALEVD 360

Query: 363 LDFEHNVRPPPVITEEVTATLEEMIKKRILEGRFDEVQKAPKRPTKAPREIKDLDENKSK 422
           LDFEHNVRPPPVITEEVTATLEEMIKKRILEGRFDEVQKAPKRPTKAPREIKDLDENKSK
Sbjct: 361 LDFEHNVRPPPVITEEVTATLEEMIKKRILEGRFDEVQKAPKRPTKAPREIKDLDENKSK 420

Query: 423 KGLGELYEEEYVEKTNLATAPSTFTDEAKNEASILFKKLCSKLDALSHYHYAPKPVIEDM 482
           KGLGELYEEEYVEKTNLATAPSTFTDEAKNEASILFKKLCSKLDALSHYHYAPKPVIEDM
Sbjct: 421 KGLGELYEEEYVEKTNLATAPSTFTDEAKNEASILFKKLCSKLDALSHYHYAPKPVIEDM 480

Query: 483 SISVNVPALAMEEVAPVAVSDAAMLAPEEVFSGKGDIKEAAELTQSDRKRRRASKKRKYK 542
           SISVNVPALAMEEVAPVAVSDAAMLAPEEVFSGKGDIKEAAELTQSDRKRRRASKKRKYK
Sbjct: 481 SISVNVPALAMEEVAPVAVSDAAMLAPEEVFSGKGDIKEAAELTQSDRKRRRASKKRKYK 540

Query: 543 AMVAKRDAKKAASNTTVPKPNEGQ 567
           AMVAKRDAKKAASNTTVPKPNEGQ
Sbjct: 541 AMVAKRDAKKAASNTTVPKPNEGQ 559

[Close]

BLAST of Carg10288-RA vs. NCBI nr
Match: XP_022987449.1 (U3 small nucleolar ribonucleoprotein protein MPP10 [Cucurbita maxima] >XP_022987450.1 U3 small nucleolar ribonucleoprotein protein MPP10 [Cucurbita maxima])

HSP 1 Score: 969.5 bits (2505), Expect = 1.2e-278
Identity = 542/564 (96.10%), Postives = 549/564 (97.34%), Query Frame = 0


Query: 3   MEAEKVVLPTTEAGLDPLHYLKSTDPPLWLAPSPSLSKVARLASQNLFAMLKPFSPKSPF 62
           MEAEKVVLPTTEAGLDPLHYLKSTDPPLWLAPSPSLSKVARLASQNLFAMLKPFSPKSPF
Sbjct: 1   MEAEKVVLPTTEAGLDPLHYLKSTDPPLWLAPSPSLSKVARLASQNLFAMLKPFSPKSPF 60

Query: 63  DHLLVDGFDAEQIWQQIDLQSQPLLASIRRDLKRFEKNPEVISNLKVSLEDKKNVTQEMA 122
           DHLLVDGFDAEQIWQQID+QSQPLLASIRRDLKRFEKNPEVISNLKVSLE+KKNVTQEMA
Sbjct: 61  DHLLVDGFDAEQIWQQIDIQSQPLLASIRRDLKRFEKNPEVISNLKVSLENKKNVTQEMA 120

Query: 123 IGSGEGSDEFEEDIKELDEEEDEDEEDEDEDEEEDSDDEEDGDTEDGEKEVSDDEVEGED 182
           IGSGEGSDEFEEDIKELD+EEDEDEEDE         DEEDGDTEDGEKEVSD+EVEGED
Sbjct: 121 IGSGEGSDEFEEDIKELDDEEDEDEEDE---------DEEDGDTEDGEKEVSDNEVEGED 180

Query: 183 GSGGIEDGFLKLKELEEFMEEDEGREYGLQKKTDGKKGKKQRKTEEESEDNEDDEDEDDE 242
           GSGGIEDGFLKLKELEEFMEEDEGREYGLQK+TDGKKGKKQRKTEEESED+EDDEDEDDE
Sbjct: 181 GSGGIEDGFLKLKELEEFMEEDEGREYGLQKETDGKKGKKQRKTEEESEDDEDDEDEDDE 240

Query: 243 DDELGELDLHGEEDEDSSKLEKARYEDFFGAKKKNHGRTKSKLTNGSESEFSDSGDEEEY 302
           DDELGE DLHGEEDEDSSKLEKARYEDFFGAKKKNHGRTKSKL NGSE EFSDSGDEEE 
Sbjct: 241 DDELGEFDLHGEEDEDSSKLEKARYEDFFGAKKKNHGRTKSKLANGSEFEFSDSGDEEED 300

Query: 303 DDEAHAERKSENLSTHQKQLKKLQSEIEMMEKANLEPKTWTMQGEVTAAKRPKNSALEVD 362
            DEAHAERKSENLSTHQKQLKKLQSEIEMMEKANLEPKTWTMQGEVTAAKRPKNSALEVD
Sbjct: 301 GDEAHAERKSENLSTHQKQLKKLQSEIEMMEKANLEPKTWTMQGEVTAAKRPKNSALEVD 360

Query: 363 LDFEHNVRPPPVITEEVTATLEEMIKKRILEGRFDEVQKAPKRPTKAPREIKDLDENKSK 422
           LDFEHNVRPPPVITEEVTATLEEMIKKRILEGRFDEVQKAPKR TKAPREIKDLDENKSK
Sbjct: 361 LDFEHNVRPPPVITEEVTATLEEMIKKRILEGRFDEVQKAPKRSTKAPREIKDLDENKSK 420

Query: 423 KGLGELYEEEYVEKTNLATAPSTFTDEAKNEASILFKKLCSKLDALSHYHYAPKPVIEDM 482
           KGLGELYEEEYVEKTNLATAPSTFTDEAKNEASILFKKLCSKLDALSHYHYAPKPVIEDM
Sbjct: 421 KGLGELYEEEYVEKTNLATAPSTFTDEAKNEASILFKKLCSKLDALSHYHYAPKPVIEDM 480

Query: 483 SISVNVPALAMEEVAPVAVSDAAMLAPEEVFSGKGDIKEAAELTQSDRKRRRASKKRKYK 542
           SISVNVPALAMEEVAPVAVSDAAMLAPEEVFSGKGDIK+AAELTQSDRKRRRASKKRKYK
Sbjct: 481 SISVNVPALAMEEVAPVAVSDAAMLAPEEVFSGKGDIKDAAELTQSDRKRRRASKKRKYK 540

Query: 543 AMVAKRDAKKAASNTTVPKPNEGQ 567
           AMVAKRDAKKAASNTTVPKPNEGQ
Sbjct: 541 AMVAKRDAKKAASNTTVPKPNEGQ 555

[Close]

BLAST of Carg10288-RA vs. NCBI nr
Match: KAG6589391.1 (Cytochrome P450 94B3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 912.1 bits (2356), Expect = 2.3e-261
Identity = 516/519 (99.42%), Postives = 516/519 (99.42%), Query Frame = 0


Query: 48   NLFAMLKPFSPKSPFDHLLVDGFDAEQIWQQIDLQSQPLLASIRRDLKRFEKNPEVISNL 107
            NLFAMLKPFSPKSPFDHLLVDGFDAEQIWQQIDLQSQPLLASIRRDLKRFEKNPEVISNL
Sbjct: 558  NLFAMLKPFSPKSPFDHLLVDGFDAEQIWQQIDLQSQPLLASIRRDLKRFEKNPEVISNL 617

Query: 108  KVSLEDKKNVTQEMAIGSGEGSDEFEEDIKELDEEEDEDEEDEDEDEEEDSDDEEDGDTE 167
            KVSLEDKKNVTQEMAIGSGEGSDEFEEDIKELDEEEDEDE  EDEDEEEDSDDEEDGDTE
Sbjct: 618  KVSLEDKKNVTQEMAIGSGEGSDEFEEDIKELDEEEDEDE--EDEDEEEDSDDEEDGDTE 677

Query: 168  DGEKEVSDDEVEGEDGSGGIEDGFLKLKELEEFMEEDEGREYGLQKKTDGKKGKKQRKTE 227
            DGEKEVSDDEVEGEDGSGGIEDGFLKLKELEEFMEEDEGREYGLQKKTDGKKGKKQRKTE
Sbjct: 678  DGEKEVSDDEVEGEDGSGGIEDGFLKLKELEEFMEEDEGREYGLQKKTDGKKGKKQRKTE 737

Query: 228  EESEDNEDDEDEDDEDDELGELDLHGEEDEDSSKLEKARYEDFFGAKKKNHGRTKSKLTN 287
            EESEDNEDDEDEDDEDDELGELDLHGEEDEDSSKLEKARYEDFFGAKKKNHGRTKSKLTN
Sbjct: 738  EESEDNEDDEDEDDEDDELGELDLHGEEDEDSSKLEKARYEDFFGAKKKNHGRTKSKLTN 797

Query: 288  GSESEFSDSGDEEEYDDEAHAERKSENLSTHQKQLKKLQSEIEMMEKANLEPKTWTMQGE 347
            GSESEFSDSGDEEE DDEAHAERKSENLSTHQKQLKKLQSEIEMMEKANLEPKTWTMQGE
Sbjct: 798  GSESEFSDSGDEEEDDDEAHAERKSENLSTHQKQLKKLQSEIEMMEKANLEPKTWTMQGE 857

Query: 348  VTAAKRPKNSALEVDLDFEHNVRPPPVITEEVTATLEEMIKKRILEGRFDEVQKAPKRPT 407
            VTAAKRPKNSALEVDLDFEHNVRPPPVITEEVTATLEEMIKKRILEGRFDEVQKAPKRPT
Sbjct: 858  VTAAKRPKNSALEVDLDFEHNVRPPPVITEEVTATLEEMIKKRILEGRFDEVQKAPKRPT 917

Query: 408  KAPREIKDLDENKSKKGLGELYEEEYVEKTNLATAPSTFTDEAKNEASILFKKLCSKLDA 467
            KAPREIKDLDENKSKKGLGELYEEEYVEKTNLATAPSTFTDEAKNEASILFKKLCSKLDA
Sbjct: 918  KAPREIKDLDENKSKKGLGELYEEEYVEKTNLATAPSTFTDEAKNEASILFKKLCSKLDA 977

Query: 468  LSHYHYAPKPVIEDMSISVNVPALAMEEVAPVAVSDAAMLAPEEVFSGKGDIKEAAELTQ 527
            LSHYHYAPKPVIEDMSISVNVPALAMEEVAPVAVSDAAMLAPEEVFSGKGDIKEAAELTQ
Sbjct: 978  LSHYHYAPKPVIEDMSISVNVPALAMEEVAPVAVSDAAMLAPEEVFSGKGDIKEAAELTQ 1037

Query: 528  SDRKRRRASKKRKYKAMVAKRDAKKAASNTTVPKPNEGQ 567
            SDRKRRRASKKRKYKAMVAKRDAKKAASNTTVPKPNEGQ
Sbjct: 1038 SDRKRRRASKKRKYKAMVAKRDAKKAASNTTVPKPNEGQ 1074

[Close]

BLAST of Carg10288-RA vs. ExPASy Swiss-Prot
Match: O00566 (U3 small nucleolar ribonucleoprotein protein MPP10 OS=Homo sapiens OX=9606 GN=MPHOSPH10 PE=1 SV=2)

HSP 1 Score: 151.0 bits (380), Expect = 4.1e-35
Identity = 181/556 (32.55%), Postives = 286/556 (51.44%), Query Frame = 0


Query: 60  SPFDHLLVDGFDAEQIWQQIDLQSQPLLASIRRDLKRFEKNPEVISNLKVSLEDKKNVTQ 119
           SP   L+++ FD EQIWQQ++LQ++P+L   +  +       E I++  +SL  +    +
Sbjct: 61  SPLQKLVIENFDDEQIWQQLELQNEPILQYFQNAVS------ETINDEDISLLPESEEQE 120

Query: 120 EMAIGSGEGSDEFEEDIKELDEEEDEDEEDEDEDEEEDSDDEEDGD--------TEDGEK 179
               GS   +D+ +ED+++L+EEE  D  ++D +  E +++    D         ED + 
Sbjct: 121 REEDGSEIEADD-KEDLEDLEEEEVSDMGNDDPEMGERAENSSKSDLRKSPVFSDEDSDL 180

Query: 180 EVSDDEVEGED-----GSGG------IEDGFLKLKELEEFME------------------ 239
           +    ++E +      G G       ++D F KL E+E ++E                  
Sbjct: 181 DFDISKLEQQSKVQNKGQGKPREKSIVDDKFFKLSEMEAYLENIEKEEERKDDNDEEEED 240

Query: 240 ----------EDEGREYGLQKKTDGKKGKKQRKTE-----EESED----NEDDEDEDDED 299
                     EDEG  +G +K   GK  +  +  +     E  ED    ++D+ D + ED
Sbjct: 241 IDFFEDIDSDEDEGGLFGSKKLKSGKSSRNLKYKDFFDPVESDEDITNVHDDELDSNKED 300

Query: 300 DELGELDLHGEEDEDSSKLEKARYEDF-FGAKKKNHGRTKSKLTNGSESEFSDSGDEEEY 359
           DE+ E     EE E+ S  E    +D       K H  +  ++T      F+   D E  
Sbjct: 301 DEIAE-----EEAEELSISETDEDDDLQENEDNKQHKESLKRVT------FALPDDAETE 360

Query: 360 DDEAHAERKS--ENLSTHQKQLKKLQSEIEMMEKANLEPKTWTMQGEVTAAKRPKNSALE 419
           D      +K+  E  S+ +K+ +K+  +I  +EK  LE K W +QGEVTA KRP+NS LE
Sbjct: 361 DTGVLNVKKNSDEVKSSFEKRQEKMNEKIASLEKELLEKKPWQLQGEVTAQKRPENSLLE 420

Query: 420 VDLDFEHNVRPPPVITEEVTATLEEMIKKRILEGRFDEV--QKAPKRPTKAPREIKDLDE 479
             L F+H VR  PVITEE T  LE++IK+RI +  +D+V  ++ PK      ++   LD 
Sbjct: 421 ETLHFDHAVRMAPVITEETTLQLEDIIKQRIRDQAWDDVVRKEKPKEDAYEYKKRLTLDH 480

Query: 480 NKSKKGLGELYEEEYVEKTNLATAPSTFTDEAKNEASILFKKLCSKLDALSHYHYAPKPV 539
            KSK  L E+YE+EY++     TA     +    E   +   L  KLDALS++H+ PKP 
Sbjct: 481 EKSKLSLAEIYEQEYIKLNQQKTAEEENPEHV--EIQKMMDSLFLKLDALSNFHFIPKPP 540

Query: 540 IEDMSISVNVPALAMEEVAPVAVSDAAMLAPEEV--FSGKGDIKEAAELTQSDRKRRRAS 553
           + ++ +  N+PA+ MEEVAPV+VSDAA+LAPEE+   +  GDIK AAE T +D+KR R  
Sbjct: 541 VPEIKVVSNLPAITMEEVAPVSVSDAALLAPEEIKEKNKAGDIKTAAEKTATDKKRERRK 596

[Close]

BLAST of Carg10288-RA vs. ExPASy Swiss-Prot
Match: Q810V0 (U3 small nucleolar ribonucleoprotein protein MPP10 OS=Mus musculus OX=10090 GN=Mphosph10 PE=1 SV=2)

HSP 1 Score: 136.7 bits (343), Expect = 8.0e-31
Identity = 178/560 (31.79%), Postives = 278/560 (49.64%), Query Frame = 0


Query: 60  SPFDHLLVDGFDAEQIWQQIDLQSQPLLASIRRDLKRFEKNPEVISNLKVSLEDKKNVTQ 119
           SP   L ++ FD EQIWQQ++LQ++P+L   +  +    ++ ++  +L    ED     +
Sbjct: 61  SPLQKLEINSFDDEQIWQQLELQNEPVLQYFQNAVSETVEDEDI--SLLPECED-----E 120

Query: 120 EMAIGSGEGSDEFEEDIK-ELDEEEDEDE---------------EDEDEDEEEDSDDEED 179
           E    + E   + +E+++ +LDEE+  DE               + +       SD++ D
Sbjct: 121 ECEEDASEVEADNQENLETDLDEEQLSDEGGDVPKGRDRAKSSRKSDPRKSPVFSDEDSD 180

Query: 180 GDTEDGEKEVSDDEVEGEDG----SGGIEDGFLKLKELEEFMEEDEGREYGLQKKTDGKK 239
            D + G+ E          G       ++D F KL E+E F+E+ E  E   +K+ DG+ 
Sbjct: 181 LDFDIGKLEQQTKMQIKPPGKPREKSVVDDKFFKLSEMESFLEKVEKEE---EKRPDGE- 240

Query: 240 GKKQRKTEEESEDNEDDEDEDDEDDELGELDLHGEEDEDSSKLEK-ARYEDFFGAKKKNH 299
                  EE+ ED +  ED D ++ E G   L G +   S+K  +  +Y+DFF   + + 
Sbjct: 241 -------EEDEEDIDLFEDIDSDESEGG---LFGRQKIKSNKSSRNLKYKDFFDPVESDE 300

Query: 300 GRTKSKLTNGSESE------FSDSGDEEEYD-DEAHAERKSENLSTHQKQLK-------- 359
             T      G + E      F++  DE   D DE +   + EN   H+  LK        
Sbjct: 301 DITGVDEELGPDEEKEEEEGFAEEADESISDTDEDNDLEEDENSDQHKGSLKRVTFALPD 360

Query: 360 ---------------------------KLQSEIEMMEKANLEPKTWTMQGEVTAAKRPKN 419
                                      K+  +I  +EK  L+ K W +QGEVTA KRP+N
Sbjct: 361 DEAEDTSPLAVKQESDEVKSSFEKRQEKMNEKIASLEKELLDKKPWQLQGEVTAQKRPEN 420

Query: 420 SALEVDLDFEHNVRPPPVITEEVTATLEEMIKKRILEGRFDEVQK--APKRPTKAPREIK 479
           S LE  L F+H VR  PVITEE T  LE++IK+RI +  +D+V++   PK      ++  
Sbjct: 421 SLLEETLHFDHAVRMAPVITEETTLHLEDIIKQRIRDQAWDDVERKEKPKEDAYEYKKRL 480

Query: 480 DLDENKSKKGLGELYEEEYVEKTNLATAPSTFTDEAKNEASILFKKLCSKLDALSHYHYA 539
            LD  KSK  L E+YE+EY++     T      +    E   +   L  KLDALS++H+ 
Sbjct: 481 TLDHEKSKLSLAEIYEQEYLKLNQQKTEEEDNPEHV--EIQKMMDSLFLKLDALSNFHFI 540

Query: 540 PKPVIEDMSISVNVPALAMEEVAPVAVSDAAMLAPEEV--FSGKGDIKEAAELTQSDRKR 553
           PKP + ++ +  N+PA+ MEEVAPV+VSDAA+LAPEE+   +  GD+K AAE T +D+KR
Sbjct: 541 PKPPVPEIKVVSNLPAITMEEVAPVSVSDAALLAPEEIKEKNKAGDLKTAAEKTATDKKR 597

[Close]

BLAST of Carg10288-RA vs. ExPASy Swiss-Prot
Match: O13910 (U3 small nucleolar ribonucleoprotein protein mpp10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=mpp10 PE=1 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 1.2e-26
Identity = 172/573 (30.02%), Postives = 286/573 (49.91%), Query Frame = 0


Query: 23  LKSTDPPLWLAPSPSLSKVARLASQNLFAMLKPFSPKSPFDHLLVDGFDAEQIWQQIDLQ 82
           L +++P L+L P+   SK     +  +F+ +K     SP   ++  G D  QI+ Q+ L 
Sbjct: 4   LINSEPTLFLFPNKEDSKQLVEKAIEVFSNIK-IPSTSPIQTIVTKGLDNWQIYNQLALA 63

Query: 83  SQPLLASIRR-DLKRFEKNPEVISNLKVSLEDKKNVTQEMAIGSGEGSDEFEEDIKELDE 142
           ++  L  + + D++  ++  + I++ +   ED +   QE++  S E ++  + D + L  
Sbjct: 64  AKYALDDLPQVDVENEDEEEDSITSFQD--EDDETSHQELSDNS-EMNNRDDADDEFLGF 123

Query: 143 EEDEDEEDEDEDEEED-SDDEEDGDTEDGEKEVSDDEVEGEDGSGGIEDGFLKLKELEEF 202
              E+ ED DE   ED S DE +   E+G+      ++E +  + G+ DGF    +++ F
Sbjct: 124 SGPENLEDVDESSAEDVSGDEAEIMNEEGQ------QIEQKKDAFGLNDGFF---DIDNF 183

Query: 203 MEEDEGREYGLQKKTDGKKGKKQRKTEEESEDNEDDEDEDDEDDELGELDLHGEEDEDSS 262
                               K+    EEE+ +     DEDD  D L + D + E+ ED S
Sbjct: 184 -------------------NKQTLALEEEAVEEGVLGDEDDGIDLLMDPDENMEDSEDES 243

Query: 263 ---KLEKARYEDFFGAK--------KKNHGRTKSKLTN------------------GSES 322
              + +   YEDFFG K        KK    +K K T+                   S++
Sbjct: 244 NGPQADSIMYEDFFGPKTAAGRRELKKKKAESKRKRTSKPDFKNDVQQNVIEENNESSDN 303

Query: 323 EFS--DSGDEEEYDDEAHAERKSENLSTHQKQLKKLQSEIEMMEKANLEPKTWTMQGEVT 382
           E++  D   ++ +  +   +  ++ LS++++   +L  +I  +E  N+  K+WTM GE T
Sbjct: 304 EYATFDRVKKDLFASDEEDDVSADQLSSYERDKARLTQQIRELEAENVAKKSWTMMGEAT 363

Query: 383 AAKRPKNSALEVDLDFEHNVRPPPVITEEVTATLEEMIKKRILEGRFDEVQK-APKRPTK 442
           +  RP NS L+VDL+FE   +P PV TEE T TLE++IK RI+   FD+V K AP   T+
Sbjct: 364 SKGRPSNSLLDVDLEFETGAKPVPVQTEETTETLEDLIKNRIISKTFDDVPKRAPVAVTE 423

Query: 443 -APREIKDLDENKSKKGLGELYEEEYVEKTNLATAPSTF---TDEAKNEASILFKKLCSK 502
             P E+ +L+ENKS++ L E YEEE+++K+N  T  S      ++   E   LF ++   
Sbjct: 424 FRPSELFELNENKSQRSLAEEYEEEFLKKSNADTYKSEADKKKEKEHEEIKALFSEVSRT 483

Query: 503 LDALSHYHYAPKPVIEDMSISVNVPALAMEEVAPVAVSDAAMLAPEEVFSGKGDIKEAAE 549
           LD+L+ +HY P P    + I  N P LAME+V P A SD   LAP+EV+    + +E   
Sbjct: 484 LDSLASWHYVPPPPESTVEIVSNAPTLAMEDVQPTAASDTMALAPQEVYKPSNENREGET 543

[Close]

BLAST of Carg10288-RA vs. ExPASy Swiss-Prot
Match: P47083 (U3 small nucleolar RNA-associated protein MPP10 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=MPP10 PE=1 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 1.2e-23
Identity = 156/518 (30.12%), Postives = 254/518 (49.03%), Query Frame = 0


Query: 59  KSPFDHLLVDGFDAEQIWQQIDLQSQPLLASIRRDLKRFEKNPEVISNLKVSLEDKKNVT 118
           K+  D + VDG DA Q+W Q+ L    +L SI  DL       + I  LK  +    N++
Sbjct: 46  KAELDEITVDGLDANQVWWQVKL----VLDSIDGDL------IQGIQELKDVVTPSHNLS 105

Query: 119 QEMAIGSGEGSDEFEEDIKELDEEEDEDEEDEDEDEEEDSDDEEDGDTEDGEKEVSDDEV 178
               + S  G +   E+ + + +E+     D  E EE+ +D   + D    E+   DDE 
Sbjct: 106 DGSTLNSSSGEESELEEAESVFKEKQMLSADVSEIEEQSNDSLSEND----EEPSMDDEK 165

Query: 179 EGEDGSGGIEDGFLKLKELEEFMEEDEGR--EYGLQKKTDGKKGKKQRKTEEESEDNEDD 238
              + +    + F + K +    +E       YG+  K    + K  R T    + NE  
Sbjct: 166 TSAEAA---REEFAEEKRISSGQDERHSSPDPYGINDKFFDLE-KFNRDTLAAEDSNEAS 225

Query: 239 EDEDDEDDELGELDLHGEEDEDSSKLEKARYEDFFGAKKKNHGRTKSKLTNGSESEFSD- 298
           E  +DED     +D   +   D  + E   YEDFF    K   +  S + +  E E  D 
Sbjct: 226 EGSEDED-----IDYFQDMPSDDEEEEAIYYEDFFDKPTKEPVKKHSDVKDPKEDEELDE 285

Query: 299 ---------------SGDEEEYDDEAHAERKSENLSTHQKQLKKLQSEIEMMEKANLEPK 358
                          + +E+E + E   E   +NLS+ +KQ  +++ +IE +E   +  K
Sbjct: 286 EEHDSAMDKVKLDLFADEEDEPNAEGVGEASDKNLSSFEKQQIEIRKQIEQLENEAVAEK 345

Query: 359 TWTMQGEVTAAKRPKNSALEVDLDFEHNVRPPPVITEEVTATLEEMIKKRILEGRFDEVQ 418
            W+++GEV A  RP+++ L  +L+F+   +P PVIT EVT +LE+MI++RI +  FD++Q
Sbjct: 346 KWSLKGEVKAKDRPEDALLTEELEFDRTAKPVPVITSEVTESLEDMIRRRIQDSNFDDLQ 405

Query: 419 KAP--KRPTKAPREIKDLDENKSKKGLGELYEEEYVEKTNLATAPSTFTDEAKNEASILF 478
           +        K+ R   +L + KS K L E+YE++Y    +  +A S    +A +E S L+
Sbjct: 406 RRTLLDITRKSQRPQFELSDVKSSKSLAEIYEDDYTRAED-ESALSEELQKAHSEISELY 465

Query: 479 KKLCSKLDALSHYHYAPKPVIEDMSISVNVPALAMEEVAPVAVSDAAMLAPEEVFS-GK- 538
             L  KLD LS  H+ PKP    + I V  P ++ME+  P+ +S+A+ LAP+E+++ GK 
Sbjct: 466 ANLVYKLDVLSSVHFVPKPASTSLEIRVETPTISMEDAQPLYMSNASSLAPQEIYNVGKA 525

Query: 539 ---GDIK-------EAAELTQSDRKR-RRASKKRKYKA 544
              G+I+          ELT+ D+ R RRA K+++ KA
Sbjct: 526 EKDGEIRLKNGVAMSKEELTREDKNRLRRALKRKRSKA 539

[Close]

BLAST of Carg10288-RA vs. ExPASy TrEMBL
Match: A0A6J1E0H5 (U3 small nucleolar ribonucleoprotein protein MPP10 OS=Cucurbita moschata OX=3662 GN=LOC111429723 PE=3 SV=1)

HSP 1 Score: 973.0 bits (2514), Expect = 5.3e-280
Identity = 549/564 (97.34%), Postives = 552/564 (97.87%), Query Frame = 0


Query: 3   MEAEKVVLPTTEAGLDPLHYLKSTDPPLWLAPSPSLSKVARLASQNLFAMLKPFSPKSPF 62
           MEAEKVVLPTTEAGLDPLHYLKSTDPPLWLAPSPSLSKVARLAS NLFAMLKPFSPKSPF
Sbjct: 1   MEAEKVVLPTTEAGLDPLHYLKSTDPPLWLAPSPSLSKVARLASHNLFAMLKPFSPKSPF 60

Query: 63  DHLLVDGFDAEQIWQQIDLQSQPLLASIRRDLKRFEKNPEVISNLKVSLEDKKNVTQEMA 122
           DHLLVDGFDAEQIWQQIDLQSQPLLASIRRDLKRFEKNPEVISNLKVSLEDKKNV QEMA
Sbjct: 61  DHLLVDGFDAEQIWQQIDLQSQPLLASIRRDLKRFEKNPEVISNLKVSLEDKKNVIQEMA 120

Query: 123 IGSGEGSDEFEEDIKELDEEEDEDEEDEDEDEEEDSDDEEDGDTEDGEKEVSDDEVEGED 182
           IGSGEGSDEFEEDIKELD+E+DEDE  EDEDEEEDSDDEEDGDTE+GEKEVSD EVEGED
Sbjct: 121 IGSGEGSDEFEEDIKELDDEDDEDE--EDEDEEEDSDDEEDGDTEEGEKEVSDGEVEGED 180

Query: 183 GSGGIEDGFLKLKELEEFMEEDEGREYGLQKKTDGKKGKKQRKTEEESEDNEDDEDEDDE 242
           GSGGIEDGFLKLKELEEFMEEDEGREYGLQKKTDGKKGKKQRKTEEES   EDDEDEDDE
Sbjct: 181 GSGGIEDGFLKLKELEEFMEEDEGREYGLQKKTDGKKGKKQRKTEEES---EDDEDEDDE 240

Query: 243 DDELGELDLHGEEDEDSSKLEKARYEDFFGAKKKNHGRTKSKLTNGSESEFSDSGDEEEY 302
           DDELGE DLHGEED DSSKLEKARYEDFFGAKKKNHGRTKSKL NGSESEFSDSGDEEE 
Sbjct: 241 DDELGEFDLHGEEDGDSSKLEKARYEDFFGAKKKNHGRTKSKLRNGSESEFSDSGDEEED 300

Query: 303 DDEAHAERKSENLSTHQKQLKKLQSEIEMMEKANLEPKTWTMQGEVTAAKRPKNSALEVD 362
           DDEAHAERKSENLSTHQKQLKKLQSEIEMMEKANLEPKTWTMQGEVTAAKRPKNSALEVD
Sbjct: 301 DDEAHAERKSENLSTHQKQLKKLQSEIEMMEKANLEPKTWTMQGEVTAAKRPKNSALEVD 360

Query: 363 LDFEHNVRPPPVITEEVTATLEEMIKKRILEGRFDEVQKAPKRPTKAPREIKDLDENKSK 422
           LDFEHNVRPPPVITEEVTATLEEMIKKRILEGRFDEVQKAPKRPTKAPREIKDLDENKSK
Sbjct: 361 LDFEHNVRPPPVITEEVTATLEEMIKKRILEGRFDEVQKAPKRPTKAPREIKDLDENKSK 420

Query: 423 KGLGELYEEEYVEKTNLATAPSTFTDEAKNEASILFKKLCSKLDALSHYHYAPKPVIEDM 482
           KGLGELYEEEYVEKTNLATAPSTFTDEAKNEASILFKKLCSKLDALSHYHYAPKPVIEDM
Sbjct: 421 KGLGELYEEEYVEKTNLATAPSTFTDEAKNEASILFKKLCSKLDALSHYHYAPKPVIEDM 480

Query: 483 SISVNVPALAMEEVAPVAVSDAAMLAPEEVFSGKGDIKEAAELTQSDRKRRRASKKRKYK 542
           SISVNVPALAMEEVAPVAVSDAAMLAPEEVFSGKGDIKEAAELTQSDRKRRRASKKRKYK
Sbjct: 481 SISVNVPALAMEEVAPVAVSDAAMLAPEEVFSGKGDIKEAAELTQSDRKRRRASKKRKYK 540

Query: 543 AMVAKRDAKKAASNTTVPKPNEGQ 567
           AMVAKRDAKKAASNTTVPKPNEGQ
Sbjct: 541 AMVAKRDAKKAASNTTVPKPNEGQ 559

[Close]

BLAST of Carg10288-RA vs. ExPASy TrEMBL
Match: A0A6J1JIX6 (U3 small nucleolar ribonucleoprotein protein MPP10 OS=Cucurbita maxima OX=3661 GN=LOC111484994 PE=3 SV=1)

HSP 1 Score: 969.5 bits (2505), Expect = 5.9e-279
Identity = 542/564 (96.10%), Postives = 549/564 (97.34%), Query Frame = 0


Query: 3   MEAEKVVLPTTEAGLDPLHYLKSTDPPLWLAPSPSLSKVARLASQNLFAMLKPFSPKSPF 62
           MEAEKVVLPTTEAGLDPLHYLKSTDPPLWLAPSPSLSKVARLASQNLFAMLKPFSPKSPF
Sbjct: 1   MEAEKVVLPTTEAGLDPLHYLKSTDPPLWLAPSPSLSKVARLASQNLFAMLKPFSPKSPF 60

Query: 63  DHLLVDGFDAEQIWQQIDLQSQPLLASIRRDLKRFEKNPEVISNLKVSLEDKKNVTQEMA 122
           DHLLVDGFDAEQIWQQID+QSQPLLASIRRDLKRFEKNPEVISNLKVSLE+KKNVTQEMA
Sbjct: 61  DHLLVDGFDAEQIWQQIDIQSQPLLASIRRDLKRFEKNPEVISNLKVSLENKKNVTQEMA 120

Query: 123 IGSGEGSDEFEEDIKELDEEEDEDEEDEDEDEEEDSDDEEDGDTEDGEKEVSDDEVEGED 182
           IGSGEGSDEFEEDIKELD+EEDEDEEDE         DEEDGDTEDGEKEVSD+EVEGED
Sbjct: 121 IGSGEGSDEFEEDIKELDDEEDEDEEDE---------DEEDGDTEDGEKEVSDNEVEGED 180

Query: 183 GSGGIEDGFLKLKELEEFMEEDEGREYGLQKKTDGKKGKKQRKTEEESEDNEDDEDEDDE 242
           GSGGIEDGFLKLKELEEFMEEDEGREYGLQK+TDGKKGKKQRKTEEESED+EDDEDEDDE
Sbjct: 181 GSGGIEDGFLKLKELEEFMEEDEGREYGLQKETDGKKGKKQRKTEEESEDDEDDEDEDDE 240

Query: 243 DDELGELDLHGEEDEDSSKLEKARYEDFFGAKKKNHGRTKSKLTNGSESEFSDSGDEEEY 302
           DDELGE DLHGEEDEDSSKLEKARYEDFFGAKKKNHGRTKSKL NGSE EFSDSGDEEE 
Sbjct: 241 DDELGEFDLHGEEDEDSSKLEKARYEDFFGAKKKNHGRTKSKLANGSEFEFSDSGDEEED 300

Query: 303 DDEAHAERKSENLSTHQKQLKKLQSEIEMMEKANLEPKTWTMQGEVTAAKRPKNSALEVD 362
            DEAHAERKSENLSTHQKQLKKLQSEIEMMEKANLEPKTWTMQGEVTAAKRPKNSALEVD
Sbjct: 301 GDEAHAERKSENLSTHQKQLKKLQSEIEMMEKANLEPKTWTMQGEVTAAKRPKNSALEVD 360

Query: 363 LDFEHNVRPPPVITEEVTATLEEMIKKRILEGRFDEVQKAPKRPTKAPREIKDLDENKSK 422
           LDFEHNVRPPPVITEEVTATLEEMIKKRILEGRFDEVQKAPKR TKAPREIKDLDENKSK
Sbjct: 361 LDFEHNVRPPPVITEEVTATLEEMIKKRILEGRFDEVQKAPKRSTKAPREIKDLDENKSK 420

Query: 423 KGLGELYEEEYVEKTNLATAPSTFTDEAKNEASILFKKLCSKLDALSHYHYAPKPVIEDM 482
           KGLGELYEEEYVEKTNLATAPSTFTDEAKNEASILFKKLCSKLDALSHYHYAPKPVIEDM
Sbjct: 421 KGLGELYEEEYVEKTNLATAPSTFTDEAKNEASILFKKLCSKLDALSHYHYAPKPVIEDM 480

Query: 483 SISVNVPALAMEEVAPVAVSDAAMLAPEEVFSGKGDIKEAAELTQSDRKRRRASKKRKYK 542
           SISVNVPALAMEEVAPVAVSDAAMLAPEEVFSGKGDIK+AAELTQSDRKRRRASKKRKYK
Sbjct: 481 SISVNVPALAMEEVAPVAVSDAAMLAPEEVFSGKGDIKDAAELTQSDRKRRRASKKRKYK 540

Query: 543 AMVAKRDAKKAASNTTVPKPNEGQ 567
           AMVAKRDAKKAASNTTVPKPNEGQ
Sbjct: 541 AMVAKRDAKKAASNTTVPKPNEGQ 555

[Close]

BLAST of Carg10288-RA vs. ExPASy TrEMBL
Match: A0A1S3CLH1 (U3 small nucleolar ribonucleoprotein protein MPP10 OS=Cucumis melo OX=3656 GN=LOC103502329 PE=3 SV=1)

HSP 1 Score: 871.7 bits (2251), Expect = 1.7e-249
Identity = 499/564 (88.48%), Postives = 523/564 (92.73%), Query Frame = 0


Query: 3   MEAEKVVLPTTEAGLDPLHYLKSTDPPLWLAPSPSLSKVARLASQNLFAMLKPFSPKSPF 62
           MEAEKVVLP TEAGL PLH LKSTDPPLWLAPSPSLS+VARLASQ+LF+MLKPF+PKSPF
Sbjct: 1   MEAEKVVLPNTEAGLKPLHSLKSTDPPLWLAPSPSLSQVARLASQSLFSMLKPFNPKSPF 60

Query: 63  DHLLVDGFDAEQIWQQIDLQSQPLLASIRRDLKRFEKNPEVISNLKVSLEDKKNVTQEMA 122
           DHLLVDGFDAEQIWQQIDLQSQPLLAS+RRDLKRFEKNPE ISNLKVSLEDKK V QEMA
Sbjct: 61  DHLLVDGFDAEQIWQQIDLQSQPLLASVRRDLKRFEKNPEAISNLKVSLEDKKKVIQEMA 120

Query: 123 IGSGEGSDEFEEDIKELDEEEDEDEEDEDEDEEEDSDDEEDGDTEDGEKEVSDDEVEGED 182
           I SGE SD+FEED+KELDEEED++EE   E+EEED DD+EDGDTE+GEKE SDDEVEGE+
Sbjct: 121 IESGEESDDFEEDMKELDEEEDDEEE---EEEEEDCDDKEDGDTEEGEKEKSDDEVEGEE 180

Query: 183 GSGGIEDGFLKLKELEEFMEEDEGREYGLQKKTDGKKGKKQRKTEEESEDNEDDEDEDDE 242
           G+GGIEDGFLKLKELEEFMEEDE REYGLQ K DGKK KKQRKTEEES        EDDE
Sbjct: 181 GNGGIEDGFLKLKELEEFMEEDEVREYGLQNKKDGKKEKKQRKTEEES--------EDDE 240

Query: 243 DDELGELDLHGEEDEDSSKLEKARYEDFFGAKKKNHGRTKSKLTNGSESEFSDSGDEEEY 302
           DDELGE DLHGEEDEDSSKL+KARYEDFFGAKKKNH R KSKLTNGSESE SDSGDEEE 
Sbjct: 241 DDELGEFDLHGEEDEDSSKLDKARYEDFFGAKKKNHLRRKSKLTNGSESELSDSGDEEE- 300

Query: 303 DDEAHAERKSENLSTHQKQLKKLQSEIEMMEKANLEPKTWTMQGEVTAAKRPKNSALEVD 362
           ++E   E KSENLSTHQK+LKKLQSEIEMMEKANLEPKTWTMQGEVTA KRPKNSALEVD
Sbjct: 301 ENETRTEPKSENLSTHQKRLKKLQSEIEMMEKANLEPKTWTMQGEVTAMKRPKNSALEVD 360

Query: 363 LDFEHNVRPPPVITEEVTATLEEMIKKRILEGRFDEVQKAPKRPTKAPREIKDLDENKSK 422
           LDFEHNVRPPPVITEEVTATLEEMI+KRILEGRFDEVQKAPKRPTKAPREIK+LDENKSK
Sbjct: 361 LDFEHNVRPPPVITEEVTATLEEMIQKRILEGRFDEVQKAPKRPTKAPREIKELDENKSK 420

Query: 423 KGLGELYEEEYVEKTNLATAPSTFTDEAKNEASILFKKLCSKLDALSHYHYAPKPVIEDM 482
           KGLGELYEEEYVEKTNLATAPS+FTDEAK EASILFKKLCSKLDALSHYHYAPKPVIEDM
Sbjct: 421 KGLGELYEEEYVEKTNLATAPSSFTDEAKTEASILFKKLCSKLDALSHYHYAPKPVIEDM 480

Query: 483 SISVNVPALAMEEVAPVAVSDAAMLAPEEVFSGKGDIKEAAELTQSDRKRRRASKKRKYK 542
           SIS NVPALAMEEVAPVAVSDAAMLAPEEVF+GKG+IKEAAELTQSDRKRRRASKKRKYK
Sbjct: 481 SISTNVPALAMEEVAPVAVSDAAMLAPEEVFAGKGEIKEAAELTQSDRKRRRASKKRKYK 540

Query: 543 AMVAKRDAKKAASNTTVPKPNEGQ 567
           AMVAKRDAKK + NTTVP  NEGQ
Sbjct: 541 AMVAKRDAKK-SGNTTVPNANEGQ 551

[Close]

BLAST of Carg10288-RA vs. ExPASy TrEMBL
Match: A0A0A0LNM0 (U3 small nucleolar ribonucleoprotein protein MPP10 OS=Cucumis sativus OX=3659 GN=Csa_1G002100 PE=3 SV=1)

HSP 1 Score: 856.3 bits (2211), Expect = 7.3e-245
Identity = 490/564 (86.88%), Postives = 521/564 (92.38%), Query Frame = 0


Query: 3   MEAEKVVLPTTEAGLDPLHYLKSTDPPLWLAPSPSLSKVARLASQNLFAMLKPFSPKSPF 62
           MEA KVVLP  EAGL PLH LKSTDPPLWLAPSPSLS+VARLASQ+LF+MLKPF+PKSPF
Sbjct: 1   MEAGKVVLPNIEAGLKPLHSLKSTDPPLWLAPSPSLSQVARLASQSLFSMLKPFNPKSPF 60

Query: 63  DHLLVDGFDAEQIWQQIDLQSQPLLASIRRDLKRFEKNPEVISNLKVSLEDKKNVTQEMA 122
           DHLLVDGFDAEQIWQQIDLQSQPLLAS+RRDLKRFEKNPE ISNLKVSLEDKK V QEM 
Sbjct: 61  DHLLVDGFDAEQIWQQIDLQSQPLLASVRRDLKRFEKNPEAISNLKVSLEDKKKVIQEMG 120

Query: 123 IGSGEGSDEFEEDIKELDEEEDEDEEDEDEDEEEDSDDEEDGDTEDGEKEVSDDEVEGED 182
           + SGE SD+FEED+KELDEEE+ED+E+++E+EEED DD EDGDTE+GEKE SDDEVEGE+
Sbjct: 121 VESGEESDDFEEDMKELDEEEEEDDEEDEEEEEEDCDDREDGDTEEGEKEKSDDEVEGEE 180

Query: 183 GSGGIEDGFLKLKELEEFMEEDEGREYGLQKKTDGKKGKKQRKTEEESEDNEDDEDEDDE 242
           G+GGIEDGFLKLKELEEFMEEDE REYGLQKK DGKK KK RKTEEES        +DDE
Sbjct: 181 GNGGIEDGFLKLKELEEFMEEDEVREYGLQKKKDGKKEKKPRKTEEES--------DDDE 240

Query: 243 DDELGELDLHGEEDEDSSKLEKARYEDFFGAKKKNHGRTKSKLTNGSESEFSDSGDEEEY 302
           DDEL E DLHGEEDEDSSKL+ ARYEDFFGAKKKNH R ++KLTNGSESE SDSGDEEE 
Sbjct: 241 DDELEEFDLHGEEDEDSSKLDNARYEDFFGAKKKNHVR-RNKLTNGSESELSDSGDEEE- 300

Query: 303 DDEAHAERKSENLSTHQKQLKKLQSEIEMMEKANLEPKTWTMQGEVTAAKRPKNSALEVD 362
           ++EA+ E KSENLSTHQK+LKKLQSEIEMMEKANLEPKTWTMQGEVTAAKRPKNSALEVD
Sbjct: 301 ENEAYTEPKSENLSTHQKKLKKLQSEIEMMEKANLEPKTWTMQGEVTAAKRPKNSALEVD 360

Query: 363 LDFEHNVRPPPVITEEVTATLEEMIKKRILEGRFDEVQKAPKRPTKAPREIKDLDENKSK 422
           LDFEHNVRPPPVITEEVTATLEEMI+KRILEGRFDEVQKAPKRPTKAPREIK+LDENKSK
Sbjct: 361 LDFEHNVRPPPVITEEVTATLEEMIQKRILEGRFDEVQKAPKRPTKAPREIKELDENKSK 420

Query: 423 KGLGELYEEEYVEKTNLATAPSTFTDEAKNEASILFKKLCSKLDALSHYHYAPKPVIEDM 482
           KGLGELYEEEYVEKTNLATAP +FTDEAK EASILFKKLCSKLDALSHYHYAPKPVIEDM
Sbjct: 421 KGLGELYEEEYVEKTNLATAPPSFTDEAKTEASILFKKLCSKLDALSHYHYAPKPVIEDM 480

Query: 483 SISVNVPALAMEEVAPVAVSDAAMLAPEEVFSGKGDIKEAAELTQSDRKRRRASKKRKYK 542
           SIS NVPALAMEEVAPVAVSDAAMLAPEEVF+GKG+IKEAAELTQSDRKRRRASKKRKYK
Sbjct: 481 SISTNVPALAMEEVAPVAVSDAAMLAPEEVFAGKGEIKEAAELTQSDRKRRRASKKRKYK 540

Query: 543 AMVAKRDAKKAASNTTVPKPNEGQ 567
           AMVAKRDAKK + NTT P  NEGQ
Sbjct: 541 AMVAKRDAKK-SGNTTAPNANEGQ 553

[Close]

BLAST of Carg10288-RA vs. ExPASy TrEMBL
Match: A0A5A7USV3 (U3 small nucleolar ribonucleoprotein protein MPP10 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00600 PE=3 SV=1)

HSP 1 Score: 853.2 bits (2203), Expect = 6.2e-244
Identity = 498/596 (83.56%), Postives = 522/596 (87.58%), Query Frame = 0


Query: 3   MEAEKVVLPTTEAGLDPLHYLKSTDPPLWLAPSPSLSKVARLASQNLFAMLKPFSPKSPF 62
           MEAEKVVLP TEAGL PLH LKSTDPPLWLAPSPSLS+VARLASQ+LF+MLKPF+PKSPF
Sbjct: 1   MEAEKVVLPNTEAGLKPLHSLKSTDPPLWLAPSPSLSQVARLASQSLFSMLKPFNPKSPF 60

Query: 63  DHLLVDGFDAEQIWQQIDLQSQPLLASIRRDLKRFEKNPEVISNLKVSLEDKKNVTQEMA 122
           DHLLVDGFDAEQIWQQIDLQSQPLLAS+RRDLKRFEKNPE ISNLKVSLEDKK V QEMA
Sbjct: 61  DHLLVDGFDAEQIWQQIDLQSQPLLASVRRDLKRFEKNPEAISNLKVSLEDKKKVIQEMA 120

Query: 123 IGSGEGSDEFEEDIKELDEEEDEDEEDEDEDEEEDSDDEEDGDTEDGEKEVSDDEVEGED 182
           I SGE SD+FEED+KELDEEED++EE   E+EEED DD+EDGDTE+GEKE SDDEVEGE+
Sbjct: 121 IESGEESDDFEEDMKELDEEEDDEEE---EEEEEDCDDKEDGDTEEGEKEKSDDEVEGEE 180

Query: 183 GSGGIEDGFLKLKELEEFMEEDEGREYGLQKKTDGKKGKKQRKTEEESEDNEDDEDEDDE 242
           G+GGIEDGFLKLKELEEFMEEDE REYGLQ K DGKK KKQRKTEEES        EDDE
Sbjct: 181 GNGGIEDGFLKLKELEEFMEEDEVREYGLQNKKDGKKEKKQRKTEEES--------EDDE 240

Query: 243 DDELGELDLHGEEDEDSSKLEKARYEDFFGAKKKNHGRTKSKLTNGSESEFSDSGDEEEY 302
           DDELGE DLHGEEDEDSSKL+KARYEDFFGAKKKNH R KSKLTNGSESE SDSGDEEE 
Sbjct: 241 DDELGEFDLHGEEDEDSSKLDKARYEDFFGAKKKNHLRRKSKLTNGSESELSDSGDEEE- 300

Query: 303 DDEAHAERKSENLSTHQKQLKKLQSEIEMMEKANLEPKTWTMQGEVTAAKRPKNSALEVD 362
           ++E   E KSENLSTHQK+LKKLQSEIEMMEKANLEPKTWTMQGEVTA KRPKNSALEVD
Sbjct: 301 ENETRTEPKSENLSTHQKRLKKLQSEIEMMEKANLEPKTWTMQGEVTAMKRPKNSALEVD 360

Query: 363 LDFEHNVRPPPVITEEVTATLEEMIKKRILEGRFDEVQKAPKRPTKAPREIKDLDENKSK 422
           LDFEHNVRPPPVITEEVTATLEEMI+KRILEGRFDEVQKAPKRPTKAPREIK+LDENKSK
Sbjct: 361 LDFEHNVRPPPVITEEVTATLEEMIQKRILEGRFDEVQKAPKRPTKAPREIKELDENKSK 420

Query: 423 KGLGELYEEEYVEKTNLATAPSTFTDEAKNEASILFKKLCSKLDALSHYHYAPKPVIEDM 482
           KGLGELYEEEYVEKTNLATAPS+FTDEAK EASILFKKLCSKLDALSHYHYAPKPVIEDM
Sbjct: 421 KGLGELYEEEYVEKTNLATAPSSFTDEAKTEASILFKKLCSKLDALSHYHYAPKPVIEDM 480

Query: 483 SISVNVPALAMEEVAPVAVSDAAMLAPEEVFSGKGDIKEAAELTQSDRKRRRASKKRKYK 542
           SIS NVPALAMEEVAPVAVSDAAMLAPEEVF+GKG+IKEAAELTQSDRKRRRASKKRKYK
Sbjct: 481 SISTNVPALAMEEVAPVAVSDAAMLAPEEVFAGKGEIKEAAELTQSDRKRRRASKKRKYK 540

Query: 543 ---------------------------------AMVAKRDAKKAASNTTVPKPNEG 566
                                            AMVAKRDAKK + NTTVP  NEG
Sbjct: 541 GKNKTKIDRLTNQTTFLLPQRNCSLVSNSLSLTAMVAKRDAKK-SGNTTVPNANEG 583

[Close]

BLAST of Carg10288-RA vs. TAIR 10
Match: AT5G66540.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: rRNA processing; LOCATED IN: cytosol, nucleolus, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: U3 small nucleolar ribonucleoprotein complex, subunit Mpp10p (InterPro:IPR012173), Mpp10 protein (InterPro:IPR007151); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 485.3 bits (1248), Expect = 6.5e-137
Identity = 317/547 (57.95%), Postives = 400/547 (73.13%), Query Frame = 0


Query: 14  EAGLDPLHYLKSTDPPLWLAPSPSLSKVARLASQNLFAMLKPFSPKSPFDHLLVDGFDAE 73
           ++G + L  LK+T+PP++LAPS S+S+ AR ASQ LF  LKP +PK PFD L  DGFDAE
Sbjct: 6   DSGFEALEKLKATEPPVFLAPS-SISEDARSASQYLFMKLKPHNPKCPFDQLSSDGFDAE 65

Query: 74  QIWQQIDLQSQPLLASIRRDLKRFEKNPEVISNL-KVSLEDKKNVTQEMAIGSGEGSDEF 133
           QIWQQID+QSQPLL S+R+++KRF KNPE I  L K++L+          +   +  DE 
Sbjct: 66  QIWQQIDMQSQPLLTSLRQEVKRFAKNPEEIRKLGKLALK----------VSHEDDIDEM 125

Query: 134 EEDIKELDEEEDEDEEDEDEDEEEDSDDEEDGDTEDGEKEVSDDEVEGEDGSGGIEDGFL 193
           + D  + D+ +DED+E E  D E + ++EE+ D E+ E+E  ++E E +  + GIED F 
Sbjct: 126 DMDGFDSDDVDDEDKEIESNDSEGEDEEEEEEDEEEEEEEEEEEEEEKDGDNEGIEDKFF 185

Query: 194 KLKELEEFMEEDEGREYGLQKKTDGKKGKKQRKTEEESEDNEDDEDEDDEDDELGELDLH 253
           K+KELEEF+EE E  EYG+  K   KKG  QRK +  S+D ED+ED+DDE++++      
Sbjct: 186 KIKELEEFLEEGEAEEYGIDHK--NKKGVAQRKKQNLSDD-EDEEDDDDEEEDVEFDAFA 245

Query: 254 GEEDEDSSKLEKARYEDFFGAKKKNHGRTKSKLTNGSESEFSDSGDEEEYDDEAHAERK- 313
           G +DE++ KL KARY+DFFG KK+    TK KL + SE            D+EA  E K 
Sbjct: 246 GGDDEETDKLGKARYDDFFGGKKE----TKMKLKDLSE------------DEEAEIENKG 305

Query: 314 SENLSTHQKQLKKLQSEIEMMEKANLEPKTWTMQGEVTAAKRPKNSALEVDLDFEHNVRP 373
           +E LSTH++   KLQS+IE MEKANL+PK WTMQGE+TAAKRP NSALEVDLDFEHN RP
Sbjct: 306 NEKLSTHERARLKLQSKIEQMEKANLDPKHWTMQGEITAAKRPMNSALEVDLDFEHNARP 365

Query: 374 PPVITEEVTATLEEMIKKRILEGRFDEVQKAPKRPTKAPREIKDLDENKSKKGLGELYEE 433
            PVITEEVTA+LE++IK RI+E RFD+VQ+AP+ PTK  RE K+LDE+KSKKGL E+YE 
Sbjct: 366 APVITEEVTASLEDLIKSRIIEARFDDVQRAPRLPTKGKREAKELDESKSKKGLAEVYEA 425

Query: 434 EYVEKTNLATAPSTFTDEAKNEASILFKKLCSKLDALSHYHYAPKPVIEDMSISVNVPAL 493
           EY +K N A AP+T +DE K EAS+LFKKLC KLDALSH+H+ PKPVIE+MSI  NV A+
Sbjct: 426 EYFQKANPAFAPTTHSDELKKEASMLFKKLCLKLDALSHFHFTPKPVIEEMSIP-NVSAI 485

Query: 494 AMEEVAPVAVSDAAMLAPEEVFSGKGDIKEAAELTQSDRKRRRASKKRKYKAMVAKRDAK 553
           AMEEVAPVAVSDAAMLAPEE+FSGKGDIK+ +ELTQ DRKRRRA+KKRK+KA  A    K
Sbjct: 486 AMEEVAPVAVSDAAMLAPEEIFSGKGDIKDESELTQEDRKRRRANKKRKFKAESANEPPK 521

Query: 554 KAASNTT 559
           KA   +T
Sbjct: 546 KALDTST 521

The following BLAST results are available for this feature:

BLAST of Carg10288-RA vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7023070.1	5.6e-292	100.00	U3 small nucleolar ribonucleoprotein MPP10, partial [Cucurbita argyrosperma subs...	[more]
XP_023516481.1	6.0e-286	98.58	U3 small nucleolar ribonucleoprotein protein MPP10 [Cucurbita pepo subsp. pepo]	[more]
XP_022921447.1	1.1e-279	97.34	U3 small nucleolar ribonucleoprotein protein MPP10 [Cucurbita moschata] >XP_0229...	[more]
XP_022987449.1	1.2e-278	96.10	U3 small nucleolar ribonucleoprotein protein MPP10 [Cucurbita maxima] >XP_022987...	[more]
KAG6589391.1	2.3e-261	99.42	Cytochrome P450 94B3, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Carg10288-RA vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O00566	4.1e-35	32.55	U3 small nucleolar ribonucleoprotein protein MPP10 OS=Homo sapiens OX=9606 GN=MP...	[more]
Q810V0	8.0e-31	31.79	U3 small nucleolar ribonucleoprotein protein MPP10 OS=Mus musculus OX=10090 GN=M...	[more]
O13910	1.2e-26	30.02	U3 small nucleolar ribonucleoprotein protein mpp10 OS=Schizosaccharomyces pombe ...	[more]
P47083	1.2e-23	30.12	U3 small nucleolar RNA-associated protein MPP10 OS=Saccharomyces cerevisiae (str...	[more]

BLAST of Carg10288-RA vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E0H5	5.3e-280	97.34	U3 small nucleolar ribonucleoprotein protein MPP10 OS=Cucurbita moschata OX=3662...	[more]
A0A6J1JIX6	5.9e-279	96.10	U3 small nucleolar ribonucleoprotein protein MPP10 OS=Cucurbita maxima OX=3661 G...	[more]
A0A1S3CLH1	1.7e-249	88.48	U3 small nucleolar ribonucleoprotein protein MPP10 OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A0A0LNM0	7.3e-245	86.88	U3 small nucleolar ribonucleoprotein protein MPP10 OS=Cucumis sativus OX=3659 GN...	[more]
A0A5A7USV3	6.2e-244	83.56	U3 small nucleolar ribonucleoprotein protein MPP10 OS=Cucumis melo var. makuwa O...	[more]

BLAST of Carg10288-RA vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G66540.1	6.5e-137	57.95	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: rRNA processing; LOCATED ...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 129..156
None	No IPR available	COILS	Coil	Coil	coord: 308..335
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 230..253
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 120..324
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 186..229
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 532..546
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 523..566
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 304..324
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 127..184
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 398..419
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 254..276
IPR012173	U3 small nucleolar ribonucleoprotein complex, subunit Mpp10	PIRSF	PIRSF017300	snoRNP_Mpp10	coord: 30..564 e-value: 2.7E-122 score: 407.4
IPR012173	U3 small nucleolar ribonucleoprotein complex, subunit Mpp10	PFAM	PF04006	Mpp10	coord: 58..560 e-value: 1.1E-101 score: 341.3
IPR012173	U3 small nucleolar ribonucleoprotein complex, subunit Mpp10	PANTHER	PTHR17039	U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN MPP10	coord: 12..554

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg10288	Carg10288	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg10288-RA:1	Carg10288-RA:1	exon
Carg10288-RA:2	Carg10288-RA:2	exon
Carg10288-RA:3	Carg10288-RA:3	exon
Carg10288-RA:4	Carg10288-RA:4	exon
Carg10288-RA:5	Carg10288-RA:5	exon
Carg10288-RA:6	Carg10288-RA:6	exon
Carg10288-RA:7	Carg10288-RA:7	exon
Carg10288-RA:8	Carg10288-RA:8	exon
Carg10288-RA:9	Carg10288-RA:9	exon
Carg10288-RA:10	Carg10288-RA:10	exon
Carg10288-RA:11	Carg10288-RA:11	exon
Carg10288-RA:12	Carg10288-RA:12	exon
Carg10288-RA:13	Carg10288-RA:13	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg10288-RA:cds	Carg10288-RA:cds	CDS
Carg10288-RA:cds	Carg10288-RA:cds_2	CDS
Carg10288-RA:cds	Carg10288-RA:cds_3	CDS
Carg10288-RA:cds	Carg10288-RA:cds_4	CDS
Carg10288-RA:cds	Carg10288-RA:cds_5	CDS
Carg10288-RA:cds	Carg10288-RA:cds_6	CDS
Carg10288-RA:cds	Carg10288-RA:cds_7	CDS
Carg10288-RA:cds	Carg10288-RA:cds_8	CDS
Carg10288-RA:cds	Carg10288-RA:cds_9	CDS
Carg10288-RA:cds	Carg10288-RA:cds_10	CDS
Carg10288-RA:cds	Carg10288-RA:cds_11	CDS
Carg10288-RA:cds	Carg10288-RA:cds_12	CDS
Carg10288-RA:cds	Carg10288-RA:cds_13	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg10288-RA:three_prime_utr	Carg10288-RA:three_prime_utr	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg10288-RA	Carg10288-RA-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0034457	Mpp10 complex
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005732	sno(s)RNA-containing ribonucleoprotein complex
cellular_component	GO:0032040	small-subunit processome
molecular_function	GO:0003729	mRNA binding