Carg09891-RA (mRNA) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg09891-RA
Type	mRNA
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	GTP-binding nuclear protein
Location	Carg_Chr10: 2672573 .. 2674945 (+)
Sequence length	945
RNA-Seq Expression	Carg09891-RA
Synteny	Carg09891-RA

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGCTTCTTGTTAGCCAGGCCAGTAGTGCTTCCCCTATAAACCCTCGTCCCTCAACTCTCAACCCATTTTAACCTAAGATCGCCGATTCCCTCCTCTCGTTTCGCGGTTCCATTATTCGACGCATTCCAATGGTGCGTTGTTTCTTTTATTCTCACTTCGATGATCTGTTTATTTTTTCTTTCATCTGTTCTTGATCCGGTTTCTTTTCGACGTATTTGTTGATTCTATTTTGTGGTGAATTTTGTAGGCTTTGCCGGACCAGAAGACTGTTGATTATCCGAGTTTCAAGCTTGTGATTGTTGGTGATGGTGGCACTGGTACGTTATGTTTTCTGAGTTTGCTTTTAGAACAGTAATCAGTAGCGATCGCTGTATCGTATCTTATGGTGATAGCAGTATGTCATTTCGGACGTAAAATGGTCTTGGCTAGCTTGTAGTAGTACTAGTGTCTCAGCTTGGAGTTAGAAGAAGAGAGCTTTAAACTTGAAACTATGTTAATGCCGTATGATTTGAACAAAGATTGATGGTACTGGATTCTTGTTCTGAGAAGAAAATTTGTGTACGCTTTATTAGGTTTTTAATCTTGATTAACACTCGAAAGTCGATAGGTATTCAAGATTAATTCTTTCACGAGCACATATAATCCACCTGGACTTCTTTTATCTTTTTCGCTGGAATAGTTTTATCAGGGAAATCCGTCATTTGTCACTGTTTGTTGTTTATCTAATAAAACTTGAAAACTCATGACATTGCCATGGAAATGAGAATTTAAAACGTTGGCAACAAAGGATTTTTAGACTATCGGATTTTGTTAATCCAGTTTTGTATTGCTTCAGTTTGAAGACTGTCGAGATATTCTTGATAATACTTGAAATTAGAGTATGATTGAATTGACTCTCTGTGTTGCTCAGGAAAAACAACTTTTGTGAAAAGACATATCACTGGGGAGTTCGAAAAGAAATACGAACGTAAGCATGTTTGCTAATCCTTTTCCATTTTGTGGTTTATTCACTGTTAGGGCTTTCTTTAAATAAATAAAAAACTCTTATATGAATTTGTTCTTCTACTGTTTTTCATGAACTTAGCAACCATTGGCGTGGAAGTGCACCCTTTGGACTTCTTCACAAACTGTGGAAAGATTAGATTTTACTGCTGGGACACTGCTGGGCAGGAGAAGTTCGGTGGTTTACGGGATGGCTACTAGTAAGTTCAAGAATTGGGTCTTCTATTCATTAAACTATATTTTTATGTTCCTAAGTTTCTATATTCCCCGATACATTCTGTCGATATTCCATCGTATGTAGTGAAAATGAACTGAAAGTTGCATAACTTTGGCAATATTGTTGAATTTTCAATACTCTCTTGTATATCGGATCTGATAGATTAGTTGATATTTTGACTATTGTGGCTTTCATTTTCGTGATGGACTTTCATTTCTCTTCATTCTGAGTTCAATTCTCTTACCGTGAAAATTCCTTATTTTGTGTCTTAACCCTTGATTGCAGCATCCATGGGCAATGTGCAATCATCATGTTTGATGTTACTGCCAGATTGACATACAAGAATGTCCCCACATGGCACCGTGATCTTTGCAGGTAATCTACCTTTTGTTTTTACGAACCAATTTTATATGAATGAATTGTTGCACATTGTCAGGGAAGAATATTCCAATTGTTGTGAAGAATATTCCAATTGTTAACTTATTAACCTGCAGGGTGTGTGAGAATATTCCAATTGTTCTTTGTGGAAACAAGGTTGATGTGAAGAACAGGCAGGTGAAGGCCAAGCAAGTCACCTTCCACAGGAAGAAGAACCTACAATACTATGAAATATCTGCGAAGAGCAACTACAACTTTGAAAAACCATTCCTGTACTTGGCCAGGAAATTAGCTGGGTAAATCAAGTTCCCGGATTACTTTGTATTACTTGTCTTTAATGTGGGAACATTCATGACAATGAACTTTTTCTCTTCTTGTGGCGATCCAGGGATGCTAACATTCATTTTGTGGAGTCTCCAGCTCTGGCTCCTCCTGAAGTACACATTGATTTGGCTGCCCAGCAACAGTGAGATTTCTTCATCCTATGTCATGACTTATGAAAGCATTTACCATCAATGGACTAATCCATATCTACAATTTGCTTATTTTGTGCAGGCATGAAGCTGAATTGGCAGCAGCTGCCAGTCAACCTCTTCCCGATGATGACGATGATGCTTTCGAGTAAAAATGGTCAATCATCTTGTGCTGATGCCCTTGGCATATCTATTTTCTCCTGTTCCCCGGAGTGAGATTTTTTTTTTTTTTTTTTTCTCCTTGCTAGGATTAACAGAAGAGAAGAGACTATGTAGGCAGAGAGTATGGCTGAGGATTGAAAC

mRNA sequence

AGCTTCTTGTTAGCCAGGCCAGTAGTGCTTCCCCTATAAACCCTCGTCCCTCAACTCTCAACCCATTTTAACCTAAGATCGCCGATTCCCTCCTCTCGTTTCGCGGTTCCATTATTCGACGCATTCCAATGGCTTTGCCGGACCAGAAGACTGTTGATTATCCGAGTTTCAAGCTTGTGATTGTTGGTGATGGTGGCACTGGAAAAACAACTTTTGTGAAAAGACATATCACTGGGGAGTTCGAAAAGAAATACGAACCAACCATTGGCGTGGAAGTGCACCCTTTGGACTTCTTCACAAACTGTGGAAAGATTAGATTTTACTGCTGGGACACTGCTGGGCAGGAGAAGTTCGGTGGTTTACGGGATGGCTACTACATCCATGGGCAATGTGCAATCATCATGTTTGATGTTACTGCCAGATTGACATACAAGAATGTCCCCACATGGCACCGTGATCTTTGCAGGGTGTGTGAGAATATTCCAATTGTTCTTTGTGGAAACAAGGTTGATGTGAAGAACAGGCAGGTGAAGGCCAAGCAAGTCACCTTCCACAGGAAGAAGAACCTACAATACTATGAAATATCTGCGAAGAGCAACTACAACTTTGAAAAACCATTCCTGTACTTGGCCAGGAAATTAGCTGGGGATGCTAACATTCATTTTGTGGAGTCTCCAGCTCTGGCTCCTCCTGAAGTACACATTGATTTGGCTGCCCAGCAACAGCATGAAGCTGAATTGGCAGCAGCTGCCAGTCAACCTCTTCCCGATGATGACGATGATGCTTTCGAGTAAAAATGGTCAATCATCTTGTGCTGATGCCCTTGGCATATCTATTTTCTCCTGTTCCCCGGAGTGAGATTTTTTTTTTTTTTTTTTTCTCCTTGCTAGGATTAACAGAAGAGAAGAGACTATGTAGGCAGAGAGTATGGCTGAGGATTGAAAC

Coding sequence (CDS)

ATGGCTTTGCCGGACCAGAAGACTGTTGATTATCCGAGTTTCAAGCTTGTGATTGTTGGTGATGGTGGCACTGGAAAAACAACTTTTGTGAAAAGACATATCACTGGGGAGTTCGAAAAGAAATACGAACCAACCATTGGCGTGGAAGTGCACCCTTTGGACTTCTTCACAAACTGTGGAAAGATTAGATTTTACTGCTGGGACACTGCTGGGCAGGAGAAGTTCGGTGGTTTACGGGATGGCTACTACATCCATGGGCAATGTGCAATCATCATGTTTGATGTTACTGCCAGATTGACATACAAGAATGTCCCCACATGGCACCGTGATCTTTGCAGGGTGTGTGAGAATATTCCAATTGTTCTTTGTGGAAACAAGGTTGATGTGAAGAACAGGCAGGTGAAGGCCAAGCAAGTCACCTTCCACAGGAAGAAGAACCTACAATACTATGAAATATCTGCGAAGAGCAACTACAACTTTGAAAAACCATTCCTGTACTTGGCCAGGAAATTAGCTGGGGATGCTAACATTCATTTTGTGGAGTCTCCAGCTCTGGCTCCTCCTGAAGTACACATTGATTTGGCTGCCCAGCAACAGCATGAAGCTGAATTGGCAGCAGCTGCCAGTCAACCTCTTCCCGATGATGACGATGATGCTTTCGAGTAA

Protein sequence

MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFVESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE

Homology

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BLAST of Carg09891-RA vs. NCBI nr
Match: KAG7023545.1 (GTP-binding nuclear protein Ran-3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 464.2 bits (1193), Expect = 6.5e-127
Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 0


Query: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 44  MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNCG 103

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 104 KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 163

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV
Sbjct: 164 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 223

Query: 181 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 222
           ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE
Sbjct: 224 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 264

[Close]

BLAST of Carg09891-RA vs. NCBI nr
Match: XP_022960900.1 (GTP-binding nuclear protein Ran-3-like [Cucurbita moschata] >XP_022960902.1 GTP-binding nuclear protein Ran-3-like [Cucurbita moschata] >XP_022960903.1 GTP-binding nuclear protein Ran-3-like [Cucurbita moschata] >XP_022987852.1 GTP-binding nuclear protein Ran-3 [Cucurbita maxima] >XP_022987853.1 GTP-binding nuclear protein Ran-3 [Cucurbita maxima] >XP_023516916.1 GTP-binding nuclear protein Ran-3-like [Cucurbita pepo subsp. pepo] >XP_023516917.1 GTP-binding nuclear protein Ran-3-like [Cucurbita pepo subsp. pepo] >XP_023516918.1 GTP-binding nuclear protein Ran-3-like [Cucurbita pepo subsp. pepo] >XP_023516919.1 GTP-binding nuclear protein Ran-3-like [Cucurbita pepo subsp. pepo] >KAG6589873.1 GTP-binding nuclear protein Ran-3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023546.1 GTP-binding nuclear protein Ran-3 [Cucurbita argyrosperma subsp. argyrosperma] >KAG6589874.1 GTP-binding nuclear protein Ran-3, partial [Cucurbita argyrosperma subsp. sororia] >KAG6589875.1 GTP-binding nuclear protein Ran-3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 464.2 bits (1193), Expect = 6.5e-127
Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 0


Query: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180

Query: 181 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 222
           ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE
Sbjct: 181 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 221

[Close]

BLAST of Carg09891-RA vs. NCBI nr
Match: XP_008465001.1 (PREDICTED: GTP-binding nuclear protein Ran-3-like [Cucumis melo] >KAA0046737.1 GTP-binding nuclear protein Ran-3-like [Cucumis melo var. makuwa])

HSP 1 Score: 463.4 bits (1191), Expect = 1.1e-126
Identity = 220/221 (99.55%), Postives = 221/221 (100.00%), Query Frame = 0


Query: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRH+TGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 34  MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 93

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 94  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 153

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV
Sbjct: 154 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 213

Query: 181 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 222
           ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE
Sbjct: 214 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 254

[Close]

BLAST of Carg09891-RA vs. NCBI nr
Match: XP_008465002.1 (PREDICTED: GTP-binding nuclear protein Ran-3 [Cucumis melo] >XP_038879204.1 GTP-binding nuclear protein Ran-3 [Benincasa hispida] >KAA0046738.1 GTP-binding nuclear protein Ran-3 [Cucumis melo var. makuwa] >TYK14515.1 GTP-binding nuclear protein Ran-3 [Cucumis melo var. makuwa])

HSP 1 Score: 463.4 bits (1191), Expect = 1.1e-126
Identity = 220/221 (99.55%), Postives = 221/221 (100.00%), Query Frame = 0


Query: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRH+TGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180

Query: 181 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 222
           ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE
Sbjct: 181 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 221

[Close]

BLAST of Carg09891-RA vs. NCBI nr
Match: XP_022144810.1 (GTP-binding nuclear protein Ran-3 [Momordica charantia])

HSP 1 Score: 461.5 bits (1186), Expect = 4.2e-126
Identity = 219/221 (99.10%), Postives = 220/221 (99.55%), Query Frame = 0


Query: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRH+TGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180

Query: 181 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 222
           ESPALAPPEVHIDLAAQQQHEAEL AAASQPLPDDDDDAFE
Sbjct: 181 ESPALAPPEVHIDLAAQQQHEAELLAAASQPLPDDDDDAFE 221

[Close]

BLAST of Carg09891-RA vs. ExPASy Swiss-Prot
Match: Q8H156 (GTP-binding nuclear protein Ran-3 OS=Arabidopsis thaliana OX=3702 GN=RAN3 PE=1 SV=2)

HSP 1 Score: 454.5 bits (1168), Expect = 6.7e-127
Identity = 215/221 (97.29%), Postives = 219/221 (99.10%), Query Frame = 0


Query: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALP+Q+TVDYPSFKLVIVGDGGTGKTTFVKRH+TGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDAN+HFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANLHFV 180

Query: 181 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 222
           ESPALAPPEV IDLAAQQQHEAELAAAASQPLPDDDDD FE
Sbjct: 181 ESPALAPPEVQIDLAAQQQHEAELAAAASQPLPDDDDDTFE 221

[Close]

BLAST of Carg09891-RA vs. ExPASy Swiss-Prot
Match: P41917 (GTP-binding nuclear protein Ran-2 OS=Arabidopsis thaliana OX=3702 GN=RAN2 PE=1 SV=3)

HSP 1 Score: 450.7 bits (1158), Expect = 9.7e-126
Identity = 211/221 (95.48%), Postives = 220/221 (99.55%), Query Frame = 0


Query: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALP+Q+TVDYPSFKLVIVGDGGTGKTTFVKRH+TGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD N+HFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDQNLHFV 180

Query: 181 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 222
           ESPALAPPEVH+D+AAQQQ+EA+LAAAA+QPLPDDDDDAFE
Sbjct: 181 ESPALAPPEVHLDIAAQQQNEADLAAAAAQPLPDDDDDAFE 221

[Close]

BLAST of Carg09891-RA vs. ExPASy Swiss-Prot
Match: P41918 (GTP-binding nuclear protein Ran-A1 OS=Nicotiana tabacum OX=4097 GN=RAN-A1 PE=2 SV=1)

HSP 1 Score: 447.2 bits (1149), Expect = 1.1e-124
Identity = 211/221 (95.48%), Postives = 216/221 (97.74%), Query Frame = 0


Query: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALP Q+ VDYPSFKLVIVGDGGTGKTTFVKRH+TGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPGQQAVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD N+HFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFV 180

Query: 181 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 222
           ESPALAPPEV IDLAAQQQHEAELAAAASQPLPDDDD+ F+
Sbjct: 181 ESPALAPPEVQIDLAAQQQHEAELAAAASQPLPDDDDETFD 221

[Close]

BLAST of Carg09891-RA vs. ExPASy Swiss-Prot
Match: A2WSI7 (GTP-binding nuclear protein Ran-1 OS=Oryza sativa subsp. indica OX=39946 GN=RAN1 PE=2 SV=2)

HSP 1 Score: 444.5 bits (1142), Expect = 7.0e-124
Identity = 208/221 (94.12%), Postives = 217/221 (98.19%), Query Frame = 0


Query: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALP+Q+TVDYPSFKLVIVGDGGTGKTTFVKRH+TGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVT+RLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTSRLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYE+SAKSNYNFEKPFLYLARKLAGD N+HFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEVSAKSNYNFEKPFLYLARKLAGDGNLHFV 180

Query: 181 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 222
           E+PALAPP+V IDLAAQQQHEAELAAAA+QPLPDDDDD  E
Sbjct: 181 ETPALAPPDVTIDLAAQQQHEAELAAAAAQPLPDDDDDLIE 221

[Close]

BLAST of Carg09891-RA vs. ExPASy Swiss-Prot
Match: Q7F7I7 (GTP-binding nuclear protein Ran-1 OS=Oryza sativa subsp. japonica OX=39947 GN=RAN1 PE=2 SV=1)

HSP 1 Score: 444.5 bits (1142), Expect = 7.0e-124
Identity = 208/221 (94.12%), Postives = 217/221 (98.19%), Query Frame = 0


Query: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALP+Q+TVDYPSFKLVIVGDGGTGKTTFVKRH+TGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVT+RLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTSRLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYE+SAKSNYNFEKPFLYLARKLAGD N+HFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEVSAKSNYNFEKPFLYLARKLAGDGNLHFV 180

Query: 181 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 222
           E+PALAPP+V IDLAAQQQHEAELAAAA+QPLPDDDDD  E
Sbjct: 181 ETPALAPPDVTIDLAAQQQHEAELAAAAAQPLPDDDDDLIE 221

[Close]

BLAST of Carg09891-RA vs. ExPASy TrEMBL
Match: A0A6J1JBH7 (GTP-binding nuclear protein OS=Cucurbita maxima OX=3661 GN=LOC111485271 PE=3 SV=1)

HSP 1 Score: 464.2 bits (1193), Expect = 3.1e-127
Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 0


Query: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180

Query: 181 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 222
           ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE
Sbjct: 181 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 221

[Close]

BLAST of Carg09891-RA vs. ExPASy TrEMBL
Match: A0A6J1HAB9 (GTP-binding nuclear protein OS=Cucurbita moschata OX=3662 GN=LOC111461564 PE=3 SV=1)

HSP 1 Score: 464.2 bits (1193), Expect = 3.1e-127
Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 0


Query: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180

Query: 181 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 222
           ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE
Sbjct: 181 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 221

[Close]

BLAST of Carg09891-RA vs. ExPASy TrEMBL
Match: A0A5A7TV42 (GTP-binding nuclear protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold15G00300 PE=3 SV=1)

HSP 1 Score: 463.4 bits (1191), Expect = 5.4e-127
Identity = 220/221 (99.55%), Postives = 221/221 (100.00%), Query Frame = 0


Query: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRH+TGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180

Query: 181 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 222
           ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE
Sbjct: 181 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 221

[Close]

BLAST of Carg09891-RA vs. ExPASy TrEMBL
Match: A0A5A7TXX0 (GTP-binding nuclear protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold216G00180 PE=3 SV=1)

HSP 1 Score: 463.4 bits (1191), Expect = 5.4e-127
Identity = 220/221 (99.55%), Postives = 221/221 (100.00%), Query Frame = 0


Query: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRH+TGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 34  MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 93

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 94  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 153

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV
Sbjct: 154 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 213

Query: 181 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 222
           ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE
Sbjct: 214 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 254

[Close]

BLAST of Carg09891-RA vs. ExPASy TrEMBL
Match: A0A1S3CMS7 (GTP-binding nuclear protein OS=Cucumis melo OX=3656 GN=LOC103502729 PE=3 SV=1)

HSP 1 Score: 463.4 bits (1191), Expect = 5.4e-127
Identity = 220/221 (99.55%), Postives = 221/221 (100.00%), Query Frame = 0


Query: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRH+TGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180

Query: 181 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 222
           ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE
Sbjct: 181 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 221

[Close]

BLAST of Carg09891-RA vs. TAIR 10
Match: AT5G55190.1 (RAN GTPase 3 )

HSP 1 Score: 454.5 bits (1168), Expect = 4.8e-128
Identity = 215/221 (97.29%), Postives = 219/221 (99.10%), Query Frame = 0


Query: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALP+Q+TVDYPSFKLVIVGDGGTGKTTFVKRH+TGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDAN+HFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANLHFV 180

Query: 181 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 222
           ESPALAPPEV IDLAAQQQHEAELAAAASQPLPDDDDD FE
Sbjct: 181 ESPALAPPEVQIDLAAQQQHEAELAAAASQPLPDDDDDTFE 221

[Close]

BLAST of Carg09891-RA vs. TAIR 10
Match: AT5G20020.1 (RAS-related GTP-binding nuclear protein 2 )

HSP 1 Score: 450.7 bits (1158), Expect = 6.9e-127
Identity = 211/221 (95.48%), Postives = 220/221 (99.55%), Query Frame = 0


Query: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALP+Q+TVDYPSFKLVIVGDGGTGKTTFVKRH+TGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD N+HFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDQNLHFV 180

Query: 181 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 222
           ESPALAPPEVH+D+AAQQQ+EA+LAAAA+QPLPDDDDDAFE
Sbjct: 181 ESPALAPPEVHLDIAAQQQNEADLAAAAAQPLPDDDDDAFE 221

[Close]

BLAST of Carg09891-RA vs. TAIR 10
Match: AT5G20010.1 (RAS-related nuclear protein-1 )

HSP 1 Score: 441.8 bits (1135), Expect = 3.2e-124
Identity = 207/221 (93.67%), Postives = 216/221 (97.74%), Query Frame = 0


Query: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALP+Q+TVDYPSFKLVIVGDGGTGKTTFVKRH+TGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD N+HFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDQNLHFV 180

Query: 181 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 222
           E+PALAPPEVHID+A QQ++EAEL  AA+QPLPDDDDD FE
Sbjct: 181 ETPALAPPEVHIDIADQQKNEAELLQAAAQPLPDDDDDIFE 221

[Close]

BLAST of Carg09891-RA vs. TAIR 10
Match: AT5G55080.1 (ras-related nuclear protein 4 )

HSP 1 Score: 306.6 bits (784), Expect = 1.6e-83
Identity = 145/212 (68.40%), Postives = 172/212 (81.13%), Query Frame = 0


Query: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALP+Q+ VD P+FKL+IVGDGGTGKTTF+KRH+TGEFE   EPT+GV+++PLDFFTN G
Sbjct: 1   MALPNQQNVDLPTFKLLIVGDGGTGKTTFLKRHLTGEFEHNTEPTLGVDIYPLDFFTNRG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRF CWDTAGQEK+ GL+D YYIHGQCAIIMFDVTAR TY N+  W+RDL RVC+NIPI
Sbjct: 61  KIRFECWDTAGQEKYSGLKDAYYIHGQCAIIMFDVTARHTYMNIDRWYRDLRRVCKNIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180
           VLCGNKVDV +RQ+K K V++HRKK LQYYE+SAK+N NFEKPFLYLAR++AGDA + FV
Sbjct: 121 VLCGNKVDVPSRQIKPKHVSYHRKKCLQYYEMSAKNNCNFEKPFLYLARRIAGDAKLSFV 180

Query: 181 ESPALAPPEVHIDLAAQQQHEAELAAAASQPL 213
           ES     PE  ID    +  +     A +QPL
Sbjct: 181 ES-----PEAQIDNLDVESLQLLTVEAGTQPL 207

[Close]

BLAST of Carg09891-RA vs. TAIR 10
Match: AT4G39890.1 (RAB GTPase homolog H1C )

HSP 1 Score: 104.8 bits (260), Expect = 9.3e-23
Identity = 60/164 (36.59%), Postives = 87/164 (53.05%), Query Frame = 0


Query: 14  FKLVIVGDGGTGKTTFVKRHITGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
           FKLV +GD   GKT+ + R +  +F+  Y+PTIG++      +     +R   WDTAGQE
Sbjct: 10  FKLVFLGDQSVGKTSIITRFMYDKFDTTYQPTIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69

Query: 74  KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRV--CENIPIVLCGNKVD-VK 133
           +F  L   Y      AI+++DV+ R T+ N   W  D+ R     N+ IVL GNK D V+
Sbjct: 70  RFRSLIPSYIRDSSVAIVVYDVSNRQTFLNTSKWIEDVHRERGQSNVIIVLVGNKTDLVE 129

Query: 134 NRQVKAKQVTFHRKK-NLQYYEISAKSNYNFEKPFLYLARKLAG 174
            RQV   +     K+  + + E SAK N+N +  F  +A  L G
Sbjct: 130 KRQVSISEGEDKGKEYGVMFIETSAKENFNIKALFRKIAAALPG 173

The following BLAST results are available for this feature:

BLAST of Carg09891-RA vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7023545.1	6.5e-127	100.00	GTP-binding nuclear protein Ran-3, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022960900.1	6.5e-127	100.00	GTP-binding nuclear protein Ran-3-like [Cucurbita moschata] >XP_022960902.1 GTP-...	[more]
XP_008465001.1	1.1e-126	99.55	PREDICTED: GTP-binding nuclear protein Ran-3-like [Cucumis melo] >KAA0046737.1 G...	[more]
XP_008465002.1	1.1e-126	99.55	PREDICTED: GTP-binding nuclear protein Ran-3 [Cucumis melo] >XP_038879204.1 GTP-...	[more]
XP_022144810.1	4.2e-126	99.10	GTP-binding nuclear protein Ran-3 [Momordica charantia]	[more]

BLAST of Carg09891-RA vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8H156	6.7e-127	97.29	GTP-binding nuclear protein Ran-3 OS=Arabidopsis thaliana OX=3702 GN=RAN3 PE=1 S...	[more]
P41917	9.7e-126	95.48	GTP-binding nuclear protein Ran-2 OS=Arabidopsis thaliana OX=3702 GN=RAN2 PE=1 S...	[more]
P41918	1.1e-124	95.48	GTP-binding nuclear protein Ran-A1 OS=Nicotiana tabacum OX=4097 GN=RAN-A1 PE=2 S...	[more]
A2WSI7	7.0e-124	94.12	GTP-binding nuclear protein Ran-1 OS=Oryza sativa subsp. indica OX=39946 GN=RAN1...	[more]
Q7F7I7	7.0e-124	94.12	GTP-binding nuclear protein Ran-1 OS=Oryza sativa subsp. japonica OX=39947 GN=RA...	[more]

BLAST of Carg09891-RA vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JBH7	3.1e-127	100.00	GTP-binding nuclear protein OS=Cucurbita maxima OX=3661 GN=LOC111485271 PE=3 SV=...	[more]
A0A6J1HAB9	3.1e-127	100.00	GTP-binding nuclear protein OS=Cucurbita moschata OX=3662 GN=LOC111461564 PE=3 S...	[more]
A0A5A7TV42	5.4e-127	99.55	GTP-binding nuclear protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A5A7TXX0	5.4e-127	99.55	GTP-binding nuclear protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf...	[more]
A0A1S3CMS7	5.4e-127	99.55	GTP-binding nuclear protein OS=Cucumis melo OX=3656 GN=LOC103502729 PE=3 SV=1	[more]

BLAST of Carg09891-RA vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G55190.1	4.8e-128	97.29	RAN GTPase 3	[more]
AT5G20020.1	6.9e-127	95.48	RAS-related GTP-binding nuclear protein 2	[more]
AT5G20010.1	3.2e-124	93.67	RAS-related nuclear protein-1	[more]
AT5G55080.1	1.6e-83	68.40	ras-related nuclear protein 4	[more]
AT4G39890.1	9.3e-23	36.59	RAB GTPase homolog H1C	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002041	Ran GTPase	PRINTS	PR00627	GTPRANTC4	coord: 74..92 score: 89.88 coord: 94..115 score: 86.19 coord: 130..148 score: 81.38 coord: 168..190 score: 74.92 coord: 27..41 score: 89.49
IPR002041	Ran GTPase	PANTHER	PTHR24071	RAN GTPASE	coord: 1..221
IPR002041	Ran GTPase	PROSITE	PS51418	RAN	coord: 7..171 score: 29.965031
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 16..170 e-value: 1.2E-8 score: -7.7
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 15..171 e-value: 2.3E-50 score: 170.4
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 5..205 score: 10.064561
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 14..174 e-value: 1.1E-27 score: 108.0
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 19..220 e-value: 1.0E-166 score: 569.8
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 11..174 e-value: 7.5E-19 score: 78.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 201..221
None	No IPR available	PANTHER	PTHR24071:SF19	GTP-BINDING NUCLEAR PROTEIN	coord: 1..221
None	No IPR available	PROSITE	PS51419	RAB	coord: 8..221 score: 19.527039
None	No IPR available	CDD	cd00877	Ran	coord: 14..179 e-value: 2.70922E-132 score: 367.012
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 4..219 e-value: 1.1E-68 score: 232.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 14..189
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 14..164 e-value: 1.5E-24 score: 84.6

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg09891	Carg09891	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg09891-RA:1	Carg09891-RA:1	exon
Carg09891-RA:2	Carg09891-RA:2	exon
Carg09891-RA:3	Carg09891-RA:3	exon
Carg09891-RA:4	Carg09891-RA:4	exon
Carg09891-RA:5	Carg09891-RA:5	exon
Carg09891-RA:6	Carg09891-RA:6	exon
Carg09891-RA:7	Carg09891-RA:7	exon
Carg09891-RA:8	Carg09891-RA:8	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg09891-RA:five_prime_utr	Carg09891-RA:five_prime_utr	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg09891-RA:cds	Carg09891-RA:cds	CDS
Carg09891-RA:cds	Carg09891-RA:cds_2	CDS
Carg09891-RA:cds	Carg09891-RA:cds_3	CDS
Carg09891-RA:cds	Carg09891-RA:cds_4	CDS
Carg09891-RA:cds	Carg09891-RA:cds_5	CDS
Carg09891-RA:cds	Carg09891-RA:cds_6	CDS
Carg09891-RA:cds	Carg09891-RA:cds_7	CDS
Carg09891-RA:cds	Carg09891-RA:cds_8	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg09891-RA:three_prime_utr	Carg09891-RA:three_prime_utr	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg09891-RA	Carg09891-RA-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0006606	protein import into nucleus
biological_process	GO:0000054	ribosomal subunit export from nucleus
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding