Carg09848-RA (mRNA) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg09848-RA
Type	mRNA
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	LEA_2 domain-containing protein
Location	Carg_Chr10: 2909987 .. 2911645 (-)
Sequence length	1314
RNA-Seq Expression	Carg09848-RA
Synteny	Carg09848-RA

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGACTGATGGCTCATCACTGCGGCTTTACTGTCAACCCCATTCATCTTTCTCCCTTCTCTATCACTCCCACAAAAGGGAATGTTCCTCTTCACAATCTATCTGGTTTTACTCCAATTTCTCAATTCTATGCTAAATCGTGAGTGTTTTGGTTCAATTTTGATCGTTTCTTAGCGATACCCAACTGGGGTTTTTAATCTCTTGAACTTTTGTTTCTCTTTAGCTTCTGAATTTCTGGTTGAACCCTCGAATTTCCATTACCGCTTTTGAACGATGATGCATGCCAAGTCCGATTCTGATGTGACAAGCTTAGCCCCATCGTCGCCAAGGTCACCGAAGCAGCGGCCGCTGTACTACGTGCAGAGCCCTTCAAGAGATTCTCACGATGGCGACAAATCGTCCACCCAAGCCACTCCCGCCTTCAACAGCCCCATGGAGAGTCCTTCGCATCCCTCTTATACGCGCCACTCTCGCTCCTCGTCTGCGAGTCGGTTTTCCGGCACGTTCCGATCCGCCCTTGGCCGGAAGGGCAGCCGGAAACGTAACGATAAAGGGTGGCCGGAGTGTAATGTGATCGAAGAGGAGGCAGACTATGAGGATCTATACGACGACAAAGGGTTAACTAGAAGATGCCAGATTCTGATGGCTCTGCTTGCGTTTGTCCTTATCTTCTTTGTGTTTTGTTTGATCATTTGGGGTGCTAGCCGGCCTTTCAAAGCTGAGATCAGAGTCAAGGTTTTGTTTCTAGCTCTATATACCCTCTGAAACAATATAAAATTGTTCCAATATTGACTTGTTTTGTTGTCGTTGATTAAAATAATATTTGGATCTTTGTTTTGAAATTTCATAAATTTTCAATTTCCATGCTTCTTGTTTTGGCTGCTGCACCATATATGATCAGTTTAGGACAACATGTTTGAAGGCATTTGGTTTTCAATGTCAGAGAAGTGAATATCCTTTTTCTCTTACAGAGCATGACAGTTCATAATGTTTATTTTGGAGAAGGATCAGACACAACAGGAGTCCCGACCAAATTACTGACAACCAACTGTTCATTAAGGATTACAGTGCACAATCCTGCAACTTTCTTTGGGATTCATGTCAGCTCCTCCCCCATCAATCTTATGTACTCCCAGATTGCAGTTGCCTCTGGTCAGGTAAAATTCCCAACTACGAACTTCCATAAGAGATGCATCAAGAATAGAAATGGGAAACTGATCCTGATCCTGATTGGATAAAAATTTGGGATGTTTTTCTGCTTTGCAGTTGAAGAAATACTATCAACCGAGACAGAGCAATCGAGTCGAATTGGTGAACCTTCAAGGGAACAAGGTGCCATTGTATGGGGCTGGAGCCAGCCTTGAAGCCTTGGATAAAAATGGAAACATTCCTATGATGCTGGTGTTTGAAGTTCATTCAAGAGGGAATGTGGTGGGGAAACTGGTAAGATCAAAGCATCGAAAGCGTGTCTCGTGTTCTTTAGACATCGACTCTCGCAACTCAAAGCCGATGAAGATTAAAGCTGATTCATGTACATATGATTGAGAGAGATCTTCATCTTGCATCTTTCTCTTCATTGGAAGGGAAAGATTCTACATTTAGAATCATCCTTCACTTGTAGATTTAGTTCTTTCTTCTTTAGAGCCATTGAATAATTAATG

mRNA sequence

TGACTGATGGCTCATCACTGCGGCTTTACTGTCAACCCCATTCATCTTTCTCCCTTCTCTATCACTCCCACAAAAGGGAATGTTCCTCTTCACAATCTATCTGGTTTTACTCCAATTTCTCAATTCTATGCTAAATCGTGAGTGTTTTGGTTCAATTTTGATCGTTTCTTAGCGATACCCAACTGGGGTTTTTAATCTCTTGAACTTTTGTTTCTCTTTAGCTTCTGAATTTCTGGTTGAACCCTCGAATTTCCATTACCGCTTTTGAACGATGATGCATGCCAAGTCCGATTCTGATGTGACAAGCTTAGCCCCATCGTCGCCAAGGTCACCGAAGCAGCGGCCGCTGTACTACGTGCAGAGCCCTTCAAGAGATTCTCACGATGGCGACAAATCGTCCACCCAAGCCACTCCCGCCTTCAACAGCCCCATGGAGAGTCCTTCGCATCCCTCTTATACGCGCCACTCTCGCTCCTCGTCTGCGAGTCGGTTTTCCGGCACGTTCCGATCCGCCCTTGGCCGGAAGGGCAGCCGGAAACGTAACGATAAAGGGTGGCCGGAGTGTAATGTGATCGAAGAGGAGGCAGACTATGAGGATCTATACGACGACAAAGGGTTAACTAGAAGATGCCAGATTCTGATGGCTCTGCTTGCGTTTGTCCTTATCTTCTTTGTGTTTTGTTTGATCATTTGGGGTGCTAGCCGGCCTTTCAAAGCTGAGATCAGAGTCAAGAGCATGACAGTTCATAATGTTTATTTTGGAGAAGGATCAGACACAACAGGAGTCCCGACCAAATTACTGACAACCAACTGTTCATTAAGGATTACAGTGCACAATCCTGCAACTTTCTTTGGGATTCATGTCAGCTCCTCCCCCATCAATCTTATGTACTCCCAGATTGCAGTTGCCTCTGGTCAGTTGAAGAAATACTATCAACCGAGACAGAGCAATCGAGTCGAATTGGTGAACCTTCAAGGGAACAAGGTGCCATTGTATGGGGCTGGAGCCAGCCTTGAAGCCTTGGATAAAAATGGAAACATTCCTATGATGCTGGTGTTTGAAGTTCATTCAAGAGGGAATGTGGTGGGGAAACTGGTAAGATCAAAGCATCGAAAGCGTGTCTCGTGTTCTTTAGACATCGACTCTCGCAACTCAAAGCCGATGAAGATTAAAGCTGATTCATGTACATATGATTGAGAGAGATCTTCATCTTGCATCTTTCTCTTCATTGGAAGGGAAAGATTCTACATTTAGAATCATCCTTCACTTGTAGATTTAGTTCTTTCTTCTTTAGAGCCATTGAATAATTAATG

Coding sequence (CDS)

ATGATGCATGCCAAGTCCGATTCTGATGTGACAAGCTTAGCCCCATCGTCGCCAAGGTCACCGAAGCAGCGGCCGCTGTACTACGTGCAGAGCCCTTCAAGAGATTCTCACGATGGCGACAAATCGTCCACCCAAGCCACTCCCGCCTTCAACAGCCCCATGGAGAGTCCTTCGCATCCCTCTTATACGCGCCACTCTCGCTCCTCGTCTGCGAGTCGGTTTTCCGGCACGTTCCGATCCGCCCTTGGCCGGAAGGGCAGCCGGAAACGTAACGATAAAGGGTGGCCGGAGTGTAATGTGATCGAAGAGGAGGCAGACTATGAGGATCTATACGACGACAAAGGGTTAACTAGAAGATGCCAGATTCTGATGGCTCTGCTTGCGTTTGTCCTTATCTTCTTTGTGTTTTGTTTGATCATTTGGGGTGCTAGCCGGCCTTTCAAAGCTGAGATCAGAGTCAAGAGCATGACAGTTCATAATGTTTATTTTGGAGAAGGATCAGACACAACAGGAGTCCCGACCAAATTACTGACAACCAACTGTTCATTAAGGATTACAGTGCACAATCCTGCAACTTTCTTTGGGATTCATGTCAGCTCCTCCCCCATCAATCTTATGTACTCCCAGATTGCAGTTGCCTCTGGTCAGTTGAAGAAATACTATCAACCGAGACAGAGCAATCGAGTCGAATTGGTGAACCTTCAAGGGAACAAGGTGCCATTGTATGGGGCTGGAGCCAGCCTTGAAGCCTTGGATAAAAATGGAAACATTCCTATGATGCTGGTGTTTGAAGTTCATTCAAGAGGGAATGTGGTGGGGAAACTGGTAAGATCAAAGCATCGAAAGCGTGTCTCGTGTTCTTTAGACATCGACTCTCGCAACTCAAAGCCGATGAAGATTAAAGCTGATTCATGTACATATGATTGA

Protein sequence

MMHAKSDSDVTSLAPSSPRSPKQRPLYYVQSPSRDSHDGDKSSTQATPAFNSPMESPSHPSYTRHSRSSSASRFSGTFRSALGRKGSRKRNDKGWPECNVIEEEADYEDLYDDKGLTRRCQILMALLAFVLIFFVFCLIIWGASRPFKAEIRVKSMTVHNVYFGEGSDTTGVPTKLLTTNCSLRITVHNPATFFGIHVSSSPINLMYSQIAVASGQLKKYYQPRQSNRVELVNLQGNKVPLYGAGASLEALDKNGNIPMMLVFEVHSRGNVVGKLVRSKHRKRVSCSLDIDSRNSKPMKIKADSCTYD

Homology

[Close]

BLAST of Carg09848-RA vs. NCBI nr
Match: XP_023516527.1 (uncharacterized protein LOC111780378 [Cucurbita pepo subsp. pepo] >KAG7023588.1 hypothetical protein SDJN02_14614 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 608.2 bits (1567), Expect = 3.9e-170
Identity = 308/308 (100.00%), Postives = 308/308 (100.00%), Query Frame = 0


Query: 1   MMHAKSDSDVTSLAPSSPRSPKQRPLYYVQSPSRDSHDGDKSSTQATPAFNSPMESPSHP 60
           MMHAKSDSDVTSLAPSSPRSPKQRPLYYVQSPSRDSHDGDKSSTQATPAFNSPMESPSHP
Sbjct: 1   MMHAKSDSDVTSLAPSSPRSPKQRPLYYVQSPSRDSHDGDKSSTQATPAFNSPMESPSHP 60

Query: 61  SYTRHSRSSSASRFSGTFRSALGRKGSRKRNDKGWPECNVIEEEADYEDLYDDKGLTRRC 120
           SYTRHSRSSSASRFSGTFRSALGRKGSRKRNDKGWPECNVIEEEADYEDLYDDKGLTRRC
Sbjct: 61  SYTRHSRSSSASRFSGTFRSALGRKGSRKRNDKGWPECNVIEEEADYEDLYDDKGLTRRC 120

Query: 121 QILMALLAFVLIFFVFCLIIWGASRPFKAEIRVKSMTVHNVYFGEGSDTTGVPTKLLTTN 180
           QILMALLAFVLIFFVFCLIIWGASRPFKAEIRVKSMTVHNVYFGEGSDTTGVPTKLLTTN
Sbjct: 121 QILMALLAFVLIFFVFCLIIWGASRPFKAEIRVKSMTVHNVYFGEGSDTTGVPTKLLTTN 180

Query: 181 CSLRITVHNPATFFGIHVSSSPINLMYSQIAVASGQLKKYYQPRQSNRVELVNLQGNKVP 240
           CSLRITVHNPATFFGIHVSSSPINLMYSQIAVASGQLKKYYQPRQSNRVELVNLQGNKVP
Sbjct: 181 CSLRITVHNPATFFGIHVSSSPINLMYSQIAVASGQLKKYYQPRQSNRVELVNLQGNKVP 240

Query: 241 LYGAGASLEALDKNGNIPMMLVFEVHSRGNVVGKLVRSKHRKRVSCSLDIDSRNSKPMKI 300
           LYGAGASLEALDKNGNIPMMLVFEVHSRGNVVGKLVRSKHRKRVSCSLDIDSRNSKPMKI
Sbjct: 241 LYGAGASLEALDKNGNIPMMLVFEVHSRGNVVGKLVRSKHRKRVSCSLDIDSRNSKPMKI 300

Query: 301 KADSCTYD 309
           KADSCTYD
Sbjct: 301 KADSCTYD 308

[Close]

BLAST of Carg09848-RA vs. NCBI nr
Match: XP_022987796.1 (uncharacterized protein LOC111485235 [Cucurbita maxima] >XP_022987797.1 uncharacterized protein LOC111485235 [Cucurbita maxima])

HSP 1 Score: 607.1 bits (1564), Expect = 8.6e-170
Identity = 307/308 (99.68%), Postives = 308/308 (100.00%), Query Frame = 0


Query: 1   MMHAKSDSDVTSLAPSSPRSPKQRPLYYVQSPSRDSHDGDKSSTQATPAFNSPMESPSHP 60
           MMHAKSDSDVTSLAPSSPRSPKQRPLYYVQSPSRDSHDGDKSSTQATPAFNSPMESPSHP
Sbjct: 1   MMHAKSDSDVTSLAPSSPRSPKQRPLYYVQSPSRDSHDGDKSSTQATPAFNSPMESPSHP 60

Query: 61  SYTRHSRSSSASRFSGTFRSALGRKGSRKRNDKGWPECNVIEEEADYEDLYDDKGLTRRC 120
           SYTRHSRSSSASRFSGTFRSALGRKGSRKRNDKGWPECNVIEEEADYEDLYDDKGLTRRC
Sbjct: 61  SYTRHSRSSSASRFSGTFRSALGRKGSRKRNDKGWPECNVIEEEADYEDLYDDKGLTRRC 120

Query: 121 QILMALLAFVLIFFVFCLIIWGASRPFKAEIRVKSMTVHNVYFGEGSDTTGVPTKLLTTN 180
           QILMALLAFVLIFFVFCLIIWGASRPFKAEIRVKSMTVHNVYFGEGSDTTGVPTKLLTTN
Sbjct: 121 QILMALLAFVLIFFVFCLIIWGASRPFKAEIRVKSMTVHNVYFGEGSDTTGVPTKLLTTN 180

Query: 181 CSLRITVHNPATFFGIHVSSSPINLMYSQIAVASGQLKKYYQPRQSNRVELVNLQGNKVP 240
           CSLRITVHNPATFFGIHVSSSPINLMYSQIAVASGQLKKYYQPRQSNRVELVNLQGNKVP
Sbjct: 181 CSLRITVHNPATFFGIHVSSSPINLMYSQIAVASGQLKKYYQPRQSNRVELVNLQGNKVP 240

Query: 241 LYGAGASLEALDKNGNIPMMLVFEVHSRGNVVGKLVRSKHRKRVSCSLDIDSRNSKPMKI 300
           LYGAGASLEALDKNGNIPMMLVFEVHSRGNVVGKLVRSKHRKRVSCSLDIDSRN+KPMKI
Sbjct: 241 LYGAGASLEALDKNGNIPMMLVFEVHSRGNVVGKLVRSKHRKRVSCSLDIDSRNTKPMKI 300

Query: 301 KADSCTYD 309
           KADSCTYD
Sbjct: 301 KADSCTYD 308

[Close]

BLAST of Carg09848-RA vs. NCBI nr
Match: XP_022961169.1 (uncharacterized protein LOC111461759 [Cucurbita moschata])

HSP 1 Score: 607.1 bits (1564), Expect = 8.6e-170
Identity = 307/308 (99.68%), Postives = 308/308 (100.00%), Query Frame = 0


Query: 1   MMHAKSDSDVTSLAPSSPRSPKQRPLYYVQSPSRDSHDGDKSSTQATPAFNSPMESPSHP 60
           MMHAKSDSDVTSLAPSSPRSPKQRPLYYVQSPSRDSHDGDKSSTQATPAFNSPMESPSHP
Sbjct: 1   MMHAKSDSDVTSLAPSSPRSPKQRPLYYVQSPSRDSHDGDKSSTQATPAFNSPMESPSHP 60

Query: 61  SYTRHSRSSSASRFSGTFRSALGRKGSRKRNDKGWPECNVIEEEADYEDLYDDKGLTRRC 120
           SYTRHSRSSSASRFSGTFRSALGRKGSRKRNDKGWPECNVIEEEADYEDLYDDKGLTRRC
Sbjct: 61  SYTRHSRSSSASRFSGTFRSALGRKGSRKRNDKGWPECNVIEEEADYEDLYDDKGLTRRC 120

Query: 121 QILMALLAFVLIFFVFCLIIWGASRPFKAEIRVKSMTVHNVYFGEGSDTTGVPTKLLTTN 180
           QILMALLAFVLIFFVFCLIIWGASRPFKAEIRVKSMTVHNVYFGEGSDTTGVPTKLLTTN
Sbjct: 121 QILMALLAFVLIFFVFCLIIWGASRPFKAEIRVKSMTVHNVYFGEGSDTTGVPTKLLTTN 180

Query: 181 CSLRITVHNPATFFGIHVSSSPINLMYSQIAVASGQLKKYYQPRQSNRVELVNLQGNKVP 240
           CSLRITVHNPATFFGIHVSSSPINLMYSQIAVASGQL+KYYQPRQSNRVELVNLQGNKVP
Sbjct: 181 CSLRITVHNPATFFGIHVSSSPINLMYSQIAVASGQLRKYYQPRQSNRVELVNLQGNKVP 240

Query: 241 LYGAGASLEALDKNGNIPMMLVFEVHSRGNVVGKLVRSKHRKRVSCSLDIDSRNSKPMKI 300
           LYGAGASLEALDKNGNIPMMLVFEVHSRGNVVGKLVRSKHRKRVSCSLDIDSRNSKPMKI
Sbjct: 241 LYGAGASLEALDKNGNIPMMLVFEVHSRGNVVGKLVRSKHRKRVSCSLDIDSRNSKPMKI 300

Query: 301 KADSCTYD 309
           KADSCTYD
Sbjct: 301 KADSCTYD 308

[Close]

BLAST of Carg09848-RA vs. NCBI nr
Match: KAG6589919.1 (hypothetical protein SDJN03_15342, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 606.3 bits (1562), Expect = 1.5e-169
Identity = 307/308 (99.68%), Postives = 308/308 (100.00%), Query Frame = 0


Query: 1   MMHAKSDSDVTSLAPSSPRSPKQRPLYYVQSPSRDSHDGDKSSTQATPAFNSPMESPSHP 60
           MMHAKSDSDVTSLAPSSPRSPKQRPLYYVQSPSRDSHDGDKSSTQATPAFNSPMESPSHP
Sbjct: 1   MMHAKSDSDVTSLAPSSPRSPKQRPLYYVQSPSRDSHDGDKSSTQATPAFNSPMESPSHP 60

Query: 61  SYTRHSRSSSASRFSGTFRSALGRKGSRKRNDKGWPECNVIEEEADYEDLYDDKGLTRRC 120
           SYTRHSRSSSASRFSGTFRSALGRKGSRKRNDKGWPECNVIEEEADYEDLYDDKGLTRRC
Sbjct: 61  SYTRHSRSSSASRFSGTFRSALGRKGSRKRNDKGWPECNVIEEEADYEDLYDDKGLTRRC 120

Query: 121 QILMALLAFVLIFFVFCLIIWGASRPFKAEIRVKSMTVHNVYFGEGSDTTGVPTKLLTTN 180
           QILMALLAFVLIFFVFCLIIWGASRPFKAEIRVKSMTVHNVYFGEGSDTTGVPTKLLTTN
Sbjct: 121 QILMALLAFVLIFFVFCLIIWGASRPFKAEIRVKSMTVHNVYFGEGSDTTGVPTKLLTTN 180

Query: 181 CSLRITVHNPATFFGIHVSSSPINLMYSQIAVASGQLKKYYQPRQSNRVELVNLQGNKVP 240
           CSLRITVHNPATFFGIHVSSSPINLMYSQIAVASGQLKKYYQPRQS+RVELVNLQGNKVP
Sbjct: 181 CSLRITVHNPATFFGIHVSSSPINLMYSQIAVASGQLKKYYQPRQSDRVELVNLQGNKVP 240

Query: 241 LYGAGASLEALDKNGNIPMMLVFEVHSRGNVVGKLVRSKHRKRVSCSLDIDSRNSKPMKI 300
           LYGAGASLEALDKNGNIPMMLVFEVHSRGNVVGKLVRSKHRKRVSCSLDIDSRNSKPMKI
Sbjct: 241 LYGAGASLEALDKNGNIPMMLVFEVHSRGNVVGKLVRSKHRKRVSCSLDIDSRNSKPMKI 300

Query: 301 KADSCTYD 309
           KADSCTYD
Sbjct: 301 KADSCTYD 308

[Close]

BLAST of Carg09848-RA vs. NCBI nr
Match: XP_038880700.1 (uncharacterized protein LOC120072313 [Benincasa hispida])

HSP 1 Score: 577.0 bits (1486), Expect = 9.6e-161
Identity = 290/308 (94.16%), Postives = 300/308 (97.40%), Query Frame = 0


Query: 1   MMHAKSDSDVTSLAPSSPRSPKQRPLYYVQSPSRDSHDGDKSSTQATPAFNSPMESPSHP 60
           MMHAKSDSDVTSLAPSSPRSPK RPLYYVQSPSRDSHDGDKSST ATPAFNSPMESPSHP
Sbjct: 1   MMHAKSDSDVTSLAPSSPRSPK-RPLYYVQSPSRDSHDGDKSSTHATPAFNSPMESPSHP 60

Query: 61  SYTRHSRSSSASRFSGTFRSALGRKGSRKRNDKGWPECNVIEEEADYEDLYDDKGLTRRC 120
           SYTRHSRSSSASRFSGTFR+ALGRKGSRKRNDKGWPECNVIEEE DY+DLY D+GLTRRC
Sbjct: 61  SYTRHSRSSSASRFSGTFRAALGRKGSRKRNDKGWPECNVIEEEGDYDDLYGDEGLTRRC 120

Query: 121 QILMALLAFVLIFFVFCLIIWGASRPFKAEIRVKSMTVHNVYFGEGSDTTGVPTKLLTTN 180
           QILMALLAF+ IFF+FCLIIWGASRPFK EI+VKSMTVHNVYFGEGSDTTGVPTKLLT N
Sbjct: 121 QILMALLAFIFIFFLFCLIIWGASRPFKTEIKVKSMTVHNVYFGEGSDTTGVPTKLLTIN 180

Query: 181 CSLRITVHNPATFFGIHVSSSPINLMYSQIAVASGQLKKYYQPRQSNRVELVNLQGNKVP 240
           CSLRITVHNPATFFGIHVSSSPINLMYSQIAVASGQLKKYYQPRQSNR+ELVNL+GNKVP
Sbjct: 181 CSLRITVHNPATFFGIHVSSSPINLMYSQIAVASGQLKKYYQPRQSNRIELVNLEGNKVP 240

Query: 241 LYGAGASLEALDKNGNIPMMLVFEVHSRGNVVGKLVRSKHRKRVSCSLDIDSRNSKPMKI 300
           LYGAGASLEALDK GNIPMMLVFE+HSRGNVVGKLVRSKHRKRVSCSL+IDSRNSKPMKI
Sbjct: 241 LYGAGASLEALDKIGNIPMMLVFEIHSRGNVVGKLVRSKHRKRVSCSLEIDSRNSKPMKI 300

Query: 301 KADSCTYD 309
           KADSCTYD
Sbjct: 301 KADSCTYD 307

[Close]

BLAST of Carg09848-RA vs. ExPASy TrEMBL
Match: A0A6J1JFC5 (uncharacterized protein LOC111485235 OS=Cucurbita maxima OX=3661 GN=LOC111485235 PE=4 SV=1)

HSP 1 Score: 607.1 bits (1564), Expect = 4.2e-170
Identity = 307/308 (99.68%), Postives = 308/308 (100.00%), Query Frame = 0


Query: 1   MMHAKSDSDVTSLAPSSPRSPKQRPLYYVQSPSRDSHDGDKSSTQATPAFNSPMESPSHP 60
           MMHAKSDSDVTSLAPSSPRSPKQRPLYYVQSPSRDSHDGDKSSTQATPAFNSPMESPSHP
Sbjct: 1   MMHAKSDSDVTSLAPSSPRSPKQRPLYYVQSPSRDSHDGDKSSTQATPAFNSPMESPSHP 60

Query: 61  SYTRHSRSSSASRFSGTFRSALGRKGSRKRNDKGWPECNVIEEEADYEDLYDDKGLTRRC 120
           SYTRHSRSSSASRFSGTFRSALGRKGSRKRNDKGWPECNVIEEEADYEDLYDDKGLTRRC
Sbjct: 61  SYTRHSRSSSASRFSGTFRSALGRKGSRKRNDKGWPECNVIEEEADYEDLYDDKGLTRRC 120

Query: 121 QILMALLAFVLIFFVFCLIIWGASRPFKAEIRVKSMTVHNVYFGEGSDTTGVPTKLLTTN 180
           QILMALLAFVLIFFVFCLIIWGASRPFKAEIRVKSMTVHNVYFGEGSDTTGVPTKLLTTN
Sbjct: 121 QILMALLAFVLIFFVFCLIIWGASRPFKAEIRVKSMTVHNVYFGEGSDTTGVPTKLLTTN 180

Query: 181 CSLRITVHNPATFFGIHVSSSPINLMYSQIAVASGQLKKYYQPRQSNRVELVNLQGNKVP 240
           CSLRITVHNPATFFGIHVSSSPINLMYSQIAVASGQLKKYYQPRQSNRVELVNLQGNKVP
Sbjct: 181 CSLRITVHNPATFFGIHVSSSPINLMYSQIAVASGQLKKYYQPRQSNRVELVNLQGNKVP 240

Query: 241 LYGAGASLEALDKNGNIPMMLVFEVHSRGNVVGKLVRSKHRKRVSCSLDIDSRNSKPMKI 300
           LYGAGASLEALDKNGNIPMMLVFEVHSRGNVVGKLVRSKHRKRVSCSLDIDSRN+KPMKI
Sbjct: 241 LYGAGASLEALDKNGNIPMMLVFEVHSRGNVVGKLVRSKHRKRVSCSLDIDSRNTKPMKI 300

Query: 301 KADSCTYD 309
           KADSCTYD
Sbjct: 301 KADSCTYD 308

[Close]

BLAST of Carg09848-RA vs. ExPASy TrEMBL
Match: A0A6J1HD92 (uncharacterized protein LOC111461759 OS=Cucurbita moschata OX=3662 GN=LOC111461759 PE=4 SV=1)

HSP 1 Score: 607.1 bits (1564), Expect = 4.2e-170
Identity = 307/308 (99.68%), Postives = 308/308 (100.00%), Query Frame = 0


Query: 1   MMHAKSDSDVTSLAPSSPRSPKQRPLYYVQSPSRDSHDGDKSSTQATPAFNSPMESPSHP 60
           MMHAKSDSDVTSLAPSSPRSPKQRPLYYVQSPSRDSHDGDKSSTQATPAFNSPMESPSHP
Sbjct: 1   MMHAKSDSDVTSLAPSSPRSPKQRPLYYVQSPSRDSHDGDKSSTQATPAFNSPMESPSHP 60

Query: 61  SYTRHSRSSSASRFSGTFRSALGRKGSRKRNDKGWPECNVIEEEADYEDLYDDKGLTRRC 120
           SYTRHSRSSSASRFSGTFRSALGRKGSRKRNDKGWPECNVIEEEADYEDLYDDKGLTRRC
Sbjct: 61  SYTRHSRSSSASRFSGTFRSALGRKGSRKRNDKGWPECNVIEEEADYEDLYDDKGLTRRC 120

Query: 121 QILMALLAFVLIFFVFCLIIWGASRPFKAEIRVKSMTVHNVYFGEGSDTTGVPTKLLTTN 180
           QILMALLAFVLIFFVFCLIIWGASRPFKAEIRVKSMTVHNVYFGEGSDTTGVPTKLLTTN
Sbjct: 121 QILMALLAFVLIFFVFCLIIWGASRPFKAEIRVKSMTVHNVYFGEGSDTTGVPTKLLTTN 180

Query: 181 CSLRITVHNPATFFGIHVSSSPINLMYSQIAVASGQLKKYYQPRQSNRVELVNLQGNKVP 240
           CSLRITVHNPATFFGIHVSSSPINLMYSQIAVASGQL+KYYQPRQSNRVELVNLQGNKVP
Sbjct: 181 CSLRITVHNPATFFGIHVSSSPINLMYSQIAVASGQLRKYYQPRQSNRVELVNLQGNKVP 240

Query: 241 LYGAGASLEALDKNGNIPMMLVFEVHSRGNVVGKLVRSKHRKRVSCSLDIDSRNSKPMKI 300
           LYGAGASLEALDKNGNIPMMLVFEVHSRGNVVGKLVRSKHRKRVSCSLDIDSRNSKPMKI
Sbjct: 241 LYGAGASLEALDKNGNIPMMLVFEVHSRGNVVGKLVRSKHRKRVSCSLDIDSRNSKPMKI 300

Query: 301 KADSCTYD 309
           KADSCTYD
Sbjct: 301 KADSCTYD 308

[Close]

BLAST of Carg09848-RA vs. ExPASy TrEMBL
Match: A0A5D3DZ77 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold403G00230 PE=4 SV=1)

HSP 1 Score: 576.6 bits (1485), Expect = 6.1e-161
Identity = 291/308 (94.48%), Postives = 300/308 (97.40%), Query Frame = 0


Query: 1   MMHAKSDSDVTSLAPSSPRSPKQRPLYYVQSPSRDSHDGDKSSTQATPAFNSPMESPSHP 60
           MMHAKSDSDVTSLAPSSPRSPK RPLYYVQSPSRDSHDGDKSST ATPAFNSPMESPSHP
Sbjct: 1   MMHAKSDSDVTSLAPSSPRSPK-RPLYYVQSPSRDSHDGDKSSTHATPAFNSPMESPSHP 60

Query: 61  SYTRHSRSSSASRFSGTFRSALGRKGSRKRNDKGWPECNVIEEEADYEDLYDDKGLTRRC 120
           SYTRHSRSSSASRFSGTFRS+LGRKGSRKRNDKGWPECNVIEEE DY+DL  DKGLTRRC
Sbjct: 61  SYTRHSRSSSASRFSGTFRSSLGRKGSRKRNDKGWPECNVIEEEGDYDDLNGDKGLTRRC 120

Query: 121 QILMALLAFVLIFFVFCLIIWGASRPFKAEIRVKSMTVHNVYFGEGSDTTGVPTKLLTTN 180
           QILMALLAF+ IF +FCLIIWGASRPFKAEI+VKSMTVHNVYFGEGSDTTGVPTKLLT N
Sbjct: 121 QILMALLAFIFIFLLFCLIIWGASRPFKAEIKVKSMTVHNVYFGEGSDTTGVPTKLLTIN 180

Query: 181 CSLRITVHNPATFFGIHVSSSPINLMYSQIAVASGQLKKYYQPRQSNRVELVNLQGNKVP 240
           CSLRITVHNPATFFGIHVSSSPINLMYSQIAVASGQLKKYYQPRQSNR++LVNLQGNKVP
Sbjct: 181 CSLRITVHNPATFFGIHVSSSPINLMYSQIAVASGQLKKYYQPRQSNRIKLVNLQGNKVP 240

Query: 241 LYGAGASLEALDKNGNIPMMLVFEVHSRGNVVGKLVRSKHRKRVSCSLDIDSRNSKPMKI 300
           LYGAGA+LEALDKNGNIPMMLVFEVHSRGNVVGKLVRSKHRKRVSCSL+IDSRNSKPMKI
Sbjct: 241 LYGAGATLEALDKNGNIPMMLVFEVHSRGNVVGKLVRSKHRKRVSCSLEIDSRNSKPMKI 300

Query: 301 KADSCTYD 309
           KADSCTYD
Sbjct: 301 KADSCTYD 307

[Close]

BLAST of Carg09848-RA vs. ExPASy TrEMBL
Match: A0A1S3CJ71 (uncharacterized protein LOC103501566 OS=Cucumis melo OX=3656 GN=LOC103501566 PE=4 SV=1)

HSP 1 Score: 576.6 bits (1485), Expect = 6.1e-161
Identity = 291/308 (94.48%), Postives = 300/308 (97.40%), Query Frame = 0


Query: 1   MMHAKSDSDVTSLAPSSPRSPKQRPLYYVQSPSRDSHDGDKSSTQATPAFNSPMESPSHP 60
           MMHAKSDSDVTSLAPSSPRSPK RPLYYVQSPSRDSHDGDKSST ATPAFNSPMESPSHP
Sbjct: 1   MMHAKSDSDVTSLAPSSPRSPK-RPLYYVQSPSRDSHDGDKSSTHATPAFNSPMESPSHP 60

Query: 61  SYTRHSRSSSASRFSGTFRSALGRKGSRKRNDKGWPECNVIEEEADYEDLYDDKGLTRRC 120
           SYTRHSRSSSASRFSGTFRS+LGRKGSRKRNDKGWPECNVIEEE DY+DL  DKGLTRRC
Sbjct: 61  SYTRHSRSSSASRFSGTFRSSLGRKGSRKRNDKGWPECNVIEEEGDYDDLNGDKGLTRRC 120

Query: 121 QILMALLAFVLIFFVFCLIIWGASRPFKAEIRVKSMTVHNVYFGEGSDTTGVPTKLLTTN 180
           QILMALLAF+ IF +FCLIIWGASRPFKAEI+VKSMTVHNVYFGEGSDTTGVPTKLLT N
Sbjct: 121 QILMALLAFIFIFLLFCLIIWGASRPFKAEIKVKSMTVHNVYFGEGSDTTGVPTKLLTIN 180

Query: 181 CSLRITVHNPATFFGIHVSSSPINLMYSQIAVASGQLKKYYQPRQSNRVELVNLQGNKVP 240
           CSLRITVHNPATFFGIHVSSSPINLMYSQIAVASGQLKKYYQPRQSNR++LVNLQGNKVP
Sbjct: 181 CSLRITVHNPATFFGIHVSSSPINLMYSQIAVASGQLKKYYQPRQSNRIKLVNLQGNKVP 240

Query: 241 LYGAGASLEALDKNGNIPMMLVFEVHSRGNVVGKLVRSKHRKRVSCSLDIDSRNSKPMKI 300
           LYGAGA+LEALDKNGNIPMMLVFEVHSRGNVVGKLVRSKHRKRVSCSL+IDSRNSKPMKI
Sbjct: 241 LYGAGATLEALDKNGNIPMMLVFEVHSRGNVVGKLVRSKHRKRVSCSLEIDSRNSKPMKI 300

Query: 301 KADSCTYD 309
           KADSCTYD
Sbjct: 301 KADSCTYD 307

[Close]

BLAST of Carg09848-RA vs. ExPASy TrEMBL
Match: A0A6J1CSV1 (uncharacterized protein LOC111014444 OS=Momordica charantia OX=3673 GN=LOC111014444 PE=4 SV=1)

HSP 1 Score: 565.1 bits (1455), Expect = 1.8e-157
Identity = 283/308 (91.88%), Postives = 299/308 (97.08%), Query Frame = 0


Query: 1   MMHAKSDSDVTSLAPSSPRSPKQRPLYYVQSPSRDSHDGDKSSTQATPAFNSPMESPSHP 60
           MMHAKSDSDVTSLAPSSPRSPK RPLYYVQSPSRDSHDGDKSST ATPAFNSPMESPSHP
Sbjct: 1   MMHAKSDSDVTSLAPSSPRSPK-RPLYYVQSPSRDSHDGDKSSTHATPAFNSPMESPSHP 60

Query: 61  SYTRHSRSSSASRFSGTFRSALGRKGSRKRNDKGWPECNVIEEEADYEDLYDDKGLTRRC 120
           SYTRHSRSSSASRFSGTFRSALGRKGSRKRN KGWP+C+VIEEE DY+DLY DK L RRC
Sbjct: 61  SYTRHSRSSSASRFSGTFRSALGRKGSRKRNHKGWPQCDVIEEEGDYDDLYADKALARRC 120

Query: 121 QILMALLAFVLIFFVFCLIIWGASRPFKAEIRVKSMTVHNVYFGEGSDTTGVPTKLLTTN 180
           QILMALLAF+ IFF+FC+IIWGASRPFKA+IRVKSM VHNVYFGEGSDTTGVPTKLLTTN
Sbjct: 121 QILMALLAFLFIFFLFCMIIWGASRPFKAQIRVKSMAVHNVYFGEGSDTTGVPTKLLTTN 180

Query: 181 CSLRITVHNPATFFGIHVSSSPINLMYSQIAVASGQLKKYYQPRQSNRVELVNLQGNKVP 240
           CSLRITV+NPATFFGIHVSS+PINLMYSQIAVA+GQLKKYYQPRQS+R+ELVNLQGNKVP
Sbjct: 181 CSLRITVYNPATFFGIHVSSTPINLMYSQIAVATGQLKKYYQPRQSHRIELVNLQGNKVP 240

Query: 241 LYGAGASLEALDKNGNIPMMLVFEVHSRGNVVGKLVRSKHRKRVSCSLDIDSRNSKPMKI 300
           LYGAGASLEALDKNGNIPM+LVFEVHSRGNVVGKLVRSKH+KR+SCSLDIDSRNSKPMKI
Sbjct: 241 LYGAGASLEALDKNGNIPMVLVFEVHSRGNVVGKLVRSKHQKRISCSLDIDSRNSKPMKI 300

Query: 301 KADSCTYD 309
           K+DSCTYD
Sbjct: 301 KSDSCTYD 307

[Close]

BLAST of Carg09848-RA vs. TAIR 10
Match: AT1G45688.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G42860.1); Has 258 Blast hits to 242 proteins in 39 species: Archae - 0; Bacteria - 11; Metazoa - 10; Fungi - 14; Plants - 198; Viruses - 17; Other Eukaryotes - 8 (source: NCBI BLink). )

HSP 1 Score: 243.8 bits (621), Expect = 1.8e-64
Identity = 147/339 (43.36%), Postives = 206/339 (60.77%), Query Frame = 0


Query: 2   MHAKSDSDVTSLAPSSPRSPKQRPLYYVQSPSRDSHDGDKSST--QATPAFNSPMESP-- 61
           MHAK+DS+VTSLA SSP    +RP+YYVQSPSRDSHDG+K++T   +TP   SPM SP  
Sbjct: 1   MHAKTDSEVTSLAASSPARSPRRPVYYVQSPSRDSHDGEKTATSFHSTPVL-SPMGSPPH 60

Query: 62  SHPSYTRHSRSSSASRFSGTF----RSALGRKGSRKR---NDKGWPECNVIEEEADYEDL 121
           SH S  RHSR SS+SRFSG+     R      GS+++    +K W EC VIEEE   +D 
Sbjct: 61  SHSSMGRHSRESSSSRFSGSLKPGSRKVNPNDGSKRKGHGGEKQWKECAVIEEEGLLDDG 120

Query: 122 YDDKGLTRRCQILMALLAFVLIFFVFCLIIWGASRPFKAEIRVKSMTVHNVYFGEGSDTT 181
             D G+ RRC +L  ++ F ++F  F LI++GA++P K +I VKS+T   +    G D  
Sbjct: 121 DRDGGVPRRCYVLAFIVGFFILFGFFSLILYGAAKPMKPKITVKSITFETLKIQAGQDAG 180

Query: 182 GVPTKLLTTNCSLRITVHNPATFFGIHVSSSPINLMYSQIAVASGQLKKYYQPRQSNRVE 241
           GV T ++T N +LR+   N  TFFG+HV+S+PI+L +SQI + SG +KK+YQ R+S R  
Sbjct: 181 GVGTDMITMNATLRMLYRNTGTFFGVHVTSTPIDLSFSQIKIGSGSVKKFYQGRKSERTV 240

Query: 242 LVNLQGNKVPLYGAGASL----------EALDKNG-------------NIPMMLVFEVHS 301
           LV++ G K+PLYG+G++L          +   K G              +PM L F V S
Sbjct: 241 LVHVIGEKIPLYGSGSTLLPPAPPAPLPKPKKKKGAPVPIPDPPAPPAPVPMTLSFVVRS 300

Query: 302 RGNVVGKLVRSKHRKRVSCSLDIDSRNSKPMKIKADSCT 307
           R  V+GKLV+ K  K++ C ++ + +N     +   +CT
Sbjct: 301 RAYVLGKLVQPKFYKKIECDINFEHKNLNKHIVITKNCT 338

[Close]

BLAST of Carg09848-RA vs. TAIR 10
Match: AT3G24600.1 (Late embryogenesis abundant protein, group 2 )

HSP 1 Score: 217.2 bits (552), Expect = 1.8e-56
Identity = 114/256 (44.53%), Postives = 169/256 (66.02%), Query Frame = 0


Query: 53  PMESPSHPSYTRHSRSSSASRFSGTFRSALGRKGSRKRNDKGWPECNVIEEEADYEDLYD 112
           P+ +P++   +    SSS+   +GT       KGS +R++  WPE      E   +++YD
Sbjct: 249 PVHTPNYTILSESRLSSSSRTSNGTSGMGFRWKGSSRRSNMYWPEKPYTINE---DEVYD 308

Query: 113 D-KGLT-RRCQILMALLAFVLIFFVFCLIIWGASRPFKAEIRVKSMTVHNVYFGEGSDTT 172
           D +GL+  +C+ ++ +L  V++F VFC ++WGAS PF   + VKS+ +H+ Y+GEG D T
Sbjct: 309 DNRGLSVGQCRAVLVILGTVVVFSVFCSVLWGASHPFSPIVSVKSVDIHSFYYGEGIDRT 368

Query: 173 GVPTKLLTTNCSLRITVHNPATFFGIHVSSSPINLMYSQIAVASGQLKKYYQPRQSNRVE 232
           GV TK+L+ N S+++T+ +PA +FGIHVSSS   L +S + +A+GQLK YYQPR+S  + 
Sbjct: 369 GVATKILSFNSSVKVTIDSPAPYFGIHVSSSTFKLTFSALTLATGQLKSYYQPRKSKHIS 428

Query: 233 LVNLQGNKVPLYGAGASLEALDKNGNIPMMLVFEVHSRGNVVGKLVRSKHRKRVSCSLDI 292
           +V L G +VPLYGAG  L A DK G +P+ L FE+ SRGN++GKLV+SKH   VSCS  I
Sbjct: 429 IVKLTGAEVPLYGAGPHLAASDKKGKVPVKLEFEIRSRGNLLGKLVKSKHENHVSCSFFI 488

Query: 293 -DSRNSKPMKIKADSC 306
             S+ SKP++    +C
Sbjct: 489 SSSKTSKPIEFTHKTC 501

[Close]

BLAST of Carg09848-RA vs. TAIR 10
Match: AT5G42860.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G45688.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 214.5 bits (545), Expect = 1.2e-55
Identity = 136/331 (41.09%), Postives = 196/331 (59.21%), Query Frame = 0


Query: 2   MHAKSDSDVTSLAPSSPRSPKQRPLYYVQSPSRDSHDGDKSST--QATPAFNSPMESPSH 61
           MHAK+DS+VTSL+ SSP    +RP Y+VQSPSRDSHDG+K++T   +TP   SPM SP H
Sbjct: 1   MHAKTDSEVTSLSASSPTRSPRRPAYFVQSPSRDSHDGEKTATSFHSTPVLTSPMGSPPH 60

Query: 62  PSYTRHSRSSSASRFSGTFRSALGRKGSRKRNDKGWPECNVIEEEADYED-LYDDKGLTR 121
                    SS+SRFS          GS+++   G  +  +IEEE   +D   + + L R
Sbjct: 61  -------SHSSSSRFSKI-------NGSKRKGHAGEKQFAMIEEEGLLDDGDREQEALPR 120

Query: 122 RCQILMALLAFVLIFFVFCLIIWGASRPFKAEIRVKSMTVHNVYFGEGSDTTGVPTKLLT 181
           RC +L  ++ F L+F  F LI++ A++P K +I VKS+T   +    G D  G+ T ++T
Sbjct: 121 RCYVLAFIVGFSLLFAFFSLILYAAAKPQKPKISVKSITFEQLKVQAGQDAGGIGTDMIT 180

Query: 182 TNCSLRITVHNPATFFGIHVSSSPINLMYSQIAVASGQLKKYYQPRQSNRVELVNLQGNK 241
            N +LR+   N  TFFG+HV+SSPI+L +SQI + SG +KK+YQ R+S R  +VN+ G+K
Sbjct: 181 MNATLRMLYRNTGTFFGVHVTSSPIDLSFSQITIGSGSIKKFYQSRKSQRTVVVNVLGDK 240

Query: 242 VPLYGAGASL----------EALDKNGNI------------PMMLVFEVHSRGNVVGKLV 301
           +PLYG+G++L          +   K G I            PM L F V SR  V+GKLV
Sbjct: 241 IPLYGSGSTLVPPPPPAPIPKPKKKKGPIVIVEPPAPPAPVPMRLNFTVRSRAYVLGKLV 300

Query: 302 RSKHRKRVSCSLDIDSRN-SKPMKIKADSCT 307
           + K  KR+ C ++ + +  SK + I  ++CT
Sbjct: 301 QPKFYKRIVCLINFEHKKLSKHIPI-TNNCT 316

[Close]

BLAST of Carg09848-RA vs. TAIR 10
Match: AT1G45688.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G42860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 188.7 bits (478), Expect = 6.8e-48
Identity = 113/239 (47.28%), Postives = 155/239 (64.85%), Query Frame = 0


Query: 2   MHAKSDSDVTSLAPSSPRSPKQRPLYYVQSPSRDSHDGDKSST--QATPAFNSPMESP-- 61
           MHAK+DS+VTSLA SSP    +RP+YYVQSPSRDSHDG+K++T   +TP   SPM SP  
Sbjct: 1   MHAKTDSEVTSLAASSPARSPRRPVYYVQSPSRDSHDGEKTATSFHSTPVL-SPMGSPPH 60

Query: 62  SHPSYTRHSRSSSASRFSGTF----RSALGRKGSRKR---NDKGWPECNVIEEEADYEDL 121
           SH S  RHSR SS+SRFSG+     R      GS+++    +K W EC VIEEE   +D 
Sbjct: 61  SHSSMGRHSRESSSSRFSGSLKPGSRKVNPNDGSKRKGHGGEKQWKECAVIEEEGLLDDG 120

Query: 122 YDDKGLTRRCQILMALLAFVLIFFVFCLIIWGASRPFKAEIRVKSMTVHNVYFGEGSDTT 181
             D G+ RRC +L  ++ F ++F  F LI++GA++P K +I VKS+T   +    G D  
Sbjct: 121 DRDGGVPRRCYVLAFIVGFFILFGFFSLILYGAAKPMKPKITVKSITFETLKIQAGQDAG 180

Query: 182 GVPTKLLTTNCSLRITVHNPATFFGIHVSSSPINLMYSQIAVASGQ----LKKYYQPRQ 226
           GV T ++T N +LR+   N  TFFG+HV+S+PI+L +SQI + SG     ++K Y+ R+
Sbjct: 181 GVGTDMITMNATLRMLYRNTGTFFGVHVTSTPIDLSFSQIKIGSGSVSLPIQKLYRMRE 238

[Close]

BLAST of Carg09848-RA vs. TAIR 10
Match: AT2G41990.1 (CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT4G35170.1); Has 172 Blast hits to 168 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 172; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 164.5 bits (415), Expect = 1.4e-40
Identity = 116/301 (38.54%), Postives = 173/301 (57.48%), Query Frame = 0


Query: 2   MHAKSDSDVTSL--APSSPRSPKQRPLYYVQSPSRDSHDGDKSSTQATPAFNSPMESPSH 61
           MHAK+DS+ TS+  A  SP     RPLYYVQSPS  +HD +K S  +     S M SP+H
Sbjct: 1   MHAKTDSEATSIDAAALSPPRSAIRPLYYVQSPS--NHDVEKMSFGSG---CSLMGSPTH 60

Query: 62  PSY-----TRHSRSSSASRFSGTFRSALGRKGSRKRNDKGWPECNVIEEEADYEDLYDDK 121
           P Y       HSR SS SRFS   R+ L  K  R+R          I +  D  D  DD 
Sbjct: 61  PHYYHCSPIHHSRESSTSRFSD--RALLSYKSIRERR-------RYINDGDDKTDGGDDD 120

Query: 122 GLTRRCQI-LMALLAFVLIFFVFCLIIWGASRPFKAEIRVKSMTVHNVYFGEGSDTTGVP 181
              R  ++ +  LL+ + +F VF LI+WGAS+ +  ++ VK M V ++    G+D +GVP
Sbjct: 121 DPFRNVRLYVWLLLSVIFLFTVFSLILWGASKSYPPKVTVKGMLVRDLNLQAGNDLSGVP 180

Query: 182 TKLLTTNCSLRITVHNPATFFGIHVSSSPINLMYSQIAVASGQLKKYYQPRQSNRVELVN 241
           T +L+ N ++RI   NP+TFF +HV++SP+ L YS + ++SG++ K+   R      +  
Sbjct: 181 TDMLSLNSTVRIYYRNPSTFFAVHVTASPLLLHYSNLLLSSGEMNKFTVGRNGETNVVTV 240

Query: 242 LQGNKVPLYGAGASLEALDKNGNIPMMLVFEVHSRGNVVGKLVRSKHRKRVSCSLDIDSR 295
           +QG+++PLYG G S   LD   ++P+ L   +HS+  ++G+LV SK   R+ CS  +D+ 
Sbjct: 241 VQGHQIPLYG-GVSFH-LD-TLSLPLNLTIVLHSKAYILGRLVTSKFYTRIICSFTLDAN 284

The following BLAST results are available for this feature:

BLAST of Carg09848-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023516527.1	3.9e-170	100.00	uncharacterized protein LOC111780378 [Cucurbita pepo subsp. pepo] >KAG7023588.1 ...	[more]
XP_022987796.1	8.6e-170	99.68	uncharacterized protein LOC111485235 [Cucurbita maxima] >XP_022987797.1 uncharac...	[more]
XP_022961169.1	8.6e-170	99.68	uncharacterized protein LOC111461759 [Cucurbita moschata]	[more]
KAG6589919.1	1.5e-169	99.68	hypothetical protein SDJN03_15342, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_038880700.1	9.6e-161	94.16	uncharacterized protein LOC120072313 [Benincasa hispida]	[more]

BLAST of Carg09848-RA vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg09848-RA vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JFC5	4.2e-170	99.68	uncharacterized protein LOC111485235 OS=Cucurbita maxima OX=3661 GN=LOC111485235...	[more]
A0A6J1HD92	4.2e-170	99.68	uncharacterized protein LOC111461759 OS=Cucurbita moschata OX=3662 GN=LOC1114617...	[more]
A0A5D3DZ77	6.1e-161	94.48	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CJ71	6.1e-161	94.48	uncharacterized protein LOC103501566 OS=Cucumis melo OX=3656 GN=LOC103501566 PE=...	[more]
A0A6J1CSV1	1.8e-157	91.88	uncharacterized protein LOC111014444 OS=Momordica charantia OX=3673 GN=LOC111014...	[more]

BLAST of Carg09848-RA vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G45688.1	1.8e-64	43.36	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G24600.1	1.8e-56	44.53	Late embryogenesis abundant protein, group 2	[more]
AT5G42860.1	1.2e-55	41.09	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G45688.2	6.8e-48	47.28	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G41990.1	1.4e-40	38.54	CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterP...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..75
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 9..30
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..75
None	No IPR available	PANTHER	PTHR31852:SF141	LATE EMBRYOGENESIS ABUNDANT PROTEIN, GROUP 2	coord: 27..308
None	No IPR available	PANTHER	PTHR31852	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY	coord: 27..308

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg09848	Carg09848	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg09848-RA:3	Carg09848-RA:3	exon
Carg09848-RA:2	Carg09848-RA:2	exon
Carg09848-RA:1	Carg09848-RA:1	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg09848-RA:three_prime_utr	Carg09848-RA:three_prime_utr	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg09848-RA:cds	Carg09848-RA:cds_3	CDS
Carg09848-RA:cds	Carg09848-RA:cds_2	CDS
Carg09848-RA:cds	Carg09848-RA:cds	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg09848-RA:five_prime_utr	Carg09848-RA:five_prime_utr	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg09848-RA	Carg09848-RA-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane