Carg08901-RA (mRNA) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg08901-RA
Type	mRNA
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	RING-type domain-containing protein
Location	Carg_Chr02: 9376664 .. 9377806 (-)
Sequence length	1143
RNA-Seq Expression	Carg08901-RA
Synteny	Carg08901-RA

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGTTACTTGAGGAGGGCCGTAGCCTCGCCGGCTATACACTCGATGACGTTTTGGCTAACAATAGATTTGGGCCGCCGGCCTCTGCAACTTCAAGGGCTGCCGAAATCCGAGGCCGAACCCTACTCGACGTGATCCGCGATGAGGAGCCAAGCGCCGCGAAGGGGCTTTTCGGAAAGGACAAAAGGACATGGAAGTCTTTTAGGGAGAAACTCCGATTGAAGCGCGCCGGCTCTGCTTGGGTCTCCACAGTTCCTATTCCGACCTCCGATATGCCTTTTCAACCTAAGCGATCCCTAATGGGGAAGCGGAGTCAAGTCCGGTTCAACACGCCTTCGTCGCGAAACTCCACCGATCATTCCGCTCGTAACCCGTCTGAAGAATCCTCCAAATCCATTCGCCGTCAAGTATCTCGACAGAGTTCCACAATGAACAGCTCCAGCGATTCGACTCCGTTCCAATACGACGAGTCCTTTGATTATTCATCCATTCCGGATTCAGCGCCGAGTCGAATGAGACCGCAAATGTCGCGTCACAACTCAATCCGGATCCCAAATCCAACGGAGAACTACACCGATCCAAGTGAACCAGATCGCGATAACCGAGTCCGACATATAAGCTCCGCCTTCTCGGAGCGGAGAATGATGTCCGCTAGAGAAACGGTAGCAGCACAAGAAGCAGCCGATGCAGCCGCCGCCGCCGCAGCGGAAGCTGCAGAAGAAGAGAAAGAGAAAGAGAAAGAACTTAACGAAAACGAAGACGAAAATGAAAACGTAGAATCAACAACAGGATCGGAGGAAGAGGAGAAGGAGTCACCGACGTCGGAGCCGGTAAGGATGTCGTTGATGGATCTGTTGCACGAGACGGACAGAGAAATGGGGTTCGAAGGGTCGAATTACGGAATGGGGTTCGAAGAAGATGGCTTCTCCGATGAGGAAGACGTTGCATACGAAGAAGAAGATGAAGACGATGGTAGTGGCGGAGAATTCAGCTGCTGCGTTTGCATGGTGAAGCATAAGAACGCGCCAATGGCGGCATGCGGCCATACATTTTGCAGGCTCTGTTCGAAGGAGCTTATGGTTAGCCGCGGGAACTGTCCCACTTGCAACGATTTCATCTTGGAAATGCTCGAGGCTTTTTAA

mRNA sequence

ATGCCGTTACTTGAGGAGGGCCGTAGCCTCGCCGGCTATACACTCGATGACGTTTTGGCTAACAATAGATTTGGGCCGCCGGCCTCTGCAACTTCAAGGGCTGCCGAAATCCGAGGCCGAACCCTACTCGACGTGATCCGCGATGAGGAGCCAAGCGCCGCGAAGGGGCTTTTCGGAAAGGACAAAAGGACATGGAAGTCTTTTAGGGAGAAACTCCGATTGAAGCGCGCCGGCTCTGCTTGGGTCTCCACAGTTCCTATTCCGACCTCCGATATGCCTTTTCAACCTAAGCGATCCCTAATGGGGAAGCGGAGTCAAGTCCGGTTCAACACGCCTTCGTCGCGAAACTCCACCGATCATTCCGCTCGTAACCCGTCTGAAGAATCCTCCAAATCCATTCGCCGTCAAGTATCTCGACAGAGTTCCACAATGAACAGCTCCAGCGATTCGACTCCGTTCCAATACGACGAGTCCTTTGATTATTCATCCATTCCGGATTCAGCGCCGAGTCGAATGAGACCGCAAATGTCGCGTCACAACTCAATCCGGATCCCAAATCCAACGGAGAACTACACCGATCCAAGTGAACCAGATCGCGATAACCGAGTCCGACATATAAGCTCCGCCTTCTCGGAGCGGAGAATGATGTCCGCTAGAGAAACGGTAGCAGCACAAGAAGCAGCCGATGCAGCCGCCGCCGCCGCAGCGGAAGCTGCAGAAGAAGAGAAAGAGAAAGAGAAAGAACTTAACGAAAACGAAGACGAAAATGAAAACGTAGAATCAACAACAGGATCGGAGGAAGAGGAGAAGGAGTCACCGACGTCGGAGCCGGTAAGGATGTCGTTGATGGATCTGTTGCACGAGACGGACAGAGAAATGGGGTTCGAAGGGTCGAATTACGGAATGGGGTTCGAAGAAGATGGCTTCTCCGATGAGGAAGACGTTGCATACGAAGAAGAAGATGAAGACGATGGTAGTGGCGGAGAATTCAGCTGCTGCGTTTGCATGGTGAAGCATAAGAACGCGCCAATGGCGGCATGCGGCCATACATTTTGCAGGCTCTGTTCGAAGGAGCTTATGGTTAGCCGCGGGAACTGTCCCACTTGCAACGATTTCATCTTGGAAATGCTCGAGGCTTTTTAA

Coding sequence (CDS)

ATGCCGTTACTTGAGGAGGGCCGTAGCCTCGCCGGCTATACACTCGATGACGTTTTGGCTAACAATAGATTTGGGCCGCCGGCCTCTGCAACTTCAAGGGCTGCCGAAATCCGAGGCCGAACCCTACTCGACGTGATCCGCGATGAGGAGCCAAGCGCCGCGAAGGGGCTTTTCGGAAAGGACAAAAGGACATGGAAGTCTTTTAGGGAGAAACTCCGATTGAAGCGCGCCGGCTCTGCTTGGGTCTCCACAGTTCCTATTCCGACCTCCGATATGCCTTTTCAACCTAAGCGATCCCTAATGGGGAAGCGGAGTCAAGTCCGGTTCAACACGCCTTCGTCGCGAAACTCCACCGATCATTCCGCTCGTAACCCGTCTGAAGAATCCTCCAAATCCATTCGCCGTCAAGTATCTCGACAGAGTTCCACAATGAACAGCTCCAGCGATTCGACTCCGTTCCAATACGACGAGTCCTTTGATTATTCATCCATTCCGGATTCAGCGCCGAGTCGAATGAGACCGCAAATGTCGCGTCACAACTCAATCCGGATCCCAAATCCAACGGAGAACTACACCGATCCAAGTGAACCAGATCGCGATAACCGAGTCCGACATATAAGCTCCGCCTTCTCGGAGCGGAGAATGATGTCCGCTAGAGAAACGGTAGCAGCACAAGAAGCAGCCGATGCAGCCGCCGCCGCCGCAGCGGAAGCTGCAGAAGAAGAGAAAGAGAAAGAGAAAGAACTTAACGAAAACGAAGACGAAAATGAAAACGTAGAATCAACAACAGGATCGGAGGAAGAGGAGAAGGAGTCACCGACGTCGGAGCCGGTAAGGATGTCGTTGATGGATCTGTTGCACGAGACGGACAGAGAAATGGGGTTCGAAGGGTCGAATTACGGAATGGGGTTCGAAGAAGATGGCTTCTCCGATGAGGAAGACGTTGCATACGAAGAAGAAGATGAAGACGATGGTAGTGGCGGAGAATTCAGCTGCTGCGTTTGCATGGTGAAGCATAAGAACGCGCCAATGGCGGCATGCGGCCATACATTTTGCAGGCTCTGTTCGAAGGAGCTTATGGTTAGCCGCGGGAACTGTCCCACTTGCAACGATTTCATCTTGGAAATGCTCGAGGCTTTTTAA

Protein sequence

MPLLEEGRSLAGYTLDDVLANNRFGPPASATSRAAEIRGRTLLDVIRDEEPSAAKGLFGKDKRTWKSFREKLRLKRAGSAWVSTVPIPTSDMPFQPKRSLMGKRSQVRFNTPSSRNSTDHSARNPSEESSKSIRRQVSRQSSTMNSSSDSTPFQYDESFDYSSIPDSAPSRMRPQMSRHNSIRIPNPTENYTDPSEPDRDNRVRHISSAFSERRMMSARETVAAQEAADAAAAAAAEAAEEEKEKEKELNENEDENENVESTTGSEEEEKESPTSEPVRMSLMDLLHETDREMGFEGSNYGMGFEEDGFSDEEDVAYEEEDEDDGSGGEFSCCVCMVKHKNAPMAACGHTFCRLCSKELMVSRGNCPTCNDFILEMLEAF

Homology

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BLAST of Carg08901-RA vs. NCBI nr
Match: KAG6606315.1 (hypothetical protein SDJN03_03632, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036254.1 hypothetical protein SDJN02_03056, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 718.4 bits (1853), Expect = 3.3e-203
Identity = 380/380 (100.00%), Postives = 380/380 (100.00%), Query Frame = 0


Query: 1   MPLLEEGRSLAGYTLDDVLANNRFGPPASATSRAAEIRGRTLLDVIRDEEPSAAKGLFGK 60
           MPLLEEGRSLAGYTLDDVLANNRFGPPASATSRAAEIRGRTLLDVIRDEEPSAAKGLFGK
Sbjct: 1   MPLLEEGRSLAGYTLDDVLANNRFGPPASATSRAAEIRGRTLLDVIRDEEPSAAKGLFGK 60

Query: 61  DKRTWKSFREKLRLKRAGSAWVSTVPIPTSDMPFQPKRSLMGKRSQVRFNTPSSRNSTDH 120
           DKRTWKSFREKLRLKRAGSAWVSTVPIPTSDMPFQPKRSLMGKRSQVRFNTPSSRNSTDH
Sbjct: 61  DKRTWKSFREKLRLKRAGSAWVSTVPIPTSDMPFQPKRSLMGKRSQVRFNTPSSRNSTDH 120

Query: 121 SARNPSEESSKSIRRQVSRQSSTMNSSSDSTPFQYDESFDYSSIPDSAPSRMRPQMSRHN 180
           SARNPSEESSKSIRRQVSRQSSTMNSSSDSTPFQYDESFDYSSIPDSAPSRMRPQMSRHN
Sbjct: 121 SARNPSEESSKSIRRQVSRQSSTMNSSSDSTPFQYDESFDYSSIPDSAPSRMRPQMSRHN 180

Query: 181 SIRIPNPTENYTDPSEPDRDNRVRHISSAFSERRMMSARETVAAQEAADAAAAAAAEAAE 240
           SIRIPNPTENYTDPSEPDRDNRVRHISSAFSERRMMSARETVAAQEAADAAAAAAAEAAE
Sbjct: 181 SIRIPNPTENYTDPSEPDRDNRVRHISSAFSERRMMSARETVAAQEAADAAAAAAAEAAE 240

Query: 241 EEKEKEKELNENEDENENVESTTGSEEEEKESPTSEPVRMSLMDLLHETDREMGFEGSNY 300
           EEKEKEKELNENEDENENVESTTGSEEEEKESPTSEPVRMSLMDLLHETDREMGFEGSNY
Sbjct: 241 EEKEKEKELNENEDENENVESTTGSEEEEKESPTSEPVRMSLMDLLHETDREMGFEGSNY 300

Query: 301 GMGFEEDGFSDEEDVAYEEEDEDDGSGGEFSCCVCMVKHKNAPMAACGHTFCRLCSKELM 360
           GMGFEEDGFSDEEDVAYEEEDEDDGSGGEFSCCVCMVKHKNAPMAACGHTFCRLCSKELM
Sbjct: 301 GMGFEEDGFSDEEDVAYEEEDEDDGSGGEFSCCVCMVKHKNAPMAACGHTFCRLCSKELM 360

Query: 361 VSRGNCPTCNDFILEMLEAF 381
           VSRGNCPTCNDFILEMLEAF
Sbjct: 361 VSRGNCPTCNDFILEMLEAF 380

[Close]

BLAST of Carg08901-RA vs. NCBI nr
Match: XP_022930936.1 (uncharacterized protein LOC111437281 [Cucurbita moschata])

HSP 1 Score: 700.3 bits (1806), Expect = 9.3e-198
Identity = 373/381 (97.90%), Postives = 377/381 (98.95%), Query Frame = 0


Query: 1   MPLLEEGRSLAGYTLDDVLANNRFGPPASATSRAAEIRGRTLLDVIRDEEPSAAKGLFGK 60
           MPL+EEGRSLAGYTLDDVLANNRFGPPASATSRAAEIRGRTLLDVIRDEEP+AAKGLFGK
Sbjct: 1   MPLVEEGRSLAGYTLDDVLANNRFGPPASATSRAAEIRGRTLLDVIRDEEPNAAKGLFGK 60

Query: 61  DKRTWKSFREKLRLKRAGSAWVSTVPIPTSDMPFQPKRSLMGKRSQVRFNTPSSRNSTDH 120
           DKRTWKSFREKLRLKRAGSAWVSTVPIPTSDMPFQPKRSLMGKRSQVRFNTPSSRNSTDH
Sbjct: 61  DKRTWKSFREKLRLKRAGSAWVSTVPIPTSDMPFQPKRSLMGKRSQVRFNTPSSRNSTDH 120

Query: 121 SARNPSEESSKSIRRQVSRQSSTMNSSSDSTPFQYDESFDYSSIPDSAPSRMRPQMSRHN 180
           SARNPSEESSKSIRRQVSRQSSTMNSSSDSTPFQYDESFDYSSIPDSAPSRMRPQMSRHN
Sbjct: 121 SARNPSEESSKSIRRQVSRQSSTMNSSSDSTPFQYDESFDYSSIPDSAPSRMRPQMSRHN 180

Query: 181 SIRIPNPTENYTDPSEPDRDNRVRHISSAFSERRMMSARETVAAQEAAD-AAAAAAAEAA 240
           SIRIPNPTENYTDP+E DRDNRVRHISSAFSERRMMSARETVAAQEAAD AAAAAAAEAA
Sbjct: 181 SIRIPNPTENYTDPTESDRDNRVRHISSAFSERRMMSARETVAAQEAADAAAAAAAAEAA 240

Query: 241 EEEKEKEKELNENEDENENVESTTGSEEEEKESPTSEPVRMSLMDLLHETDREMGFEGSN 300
           EEEKEKEKE NENEDE+ENVESTTGSEE EKESPTSEPVRMSLMDLLHETDREMGFEGSN
Sbjct: 241 EEEKEKEKEQNENEDEDENVESTTGSEEGEKESPTSEPVRMSLMDLLHETDREMGFEGSN 300

Query: 301 YGMGFEEDGFSDEEDVAYEEEDEDDGSGGEFSCCVCMVKHKNAPMAACGHTFCRLCSKEL 360
           YGMGFEEDGFSDEEDVAYEEEDEDDGSGGEFSCCVCMVKHKNAPMAACGHTFCRLCSKEL
Sbjct: 301 YGMGFEEDGFSDEEDVAYEEEDEDDGSGGEFSCCVCMVKHKNAPMAACGHTFCRLCSKEL 360

Query: 361 MVSRGNCPTCNDFILEMLEAF 381
           MVSRGNCPTCNDFILEMLEAF
Sbjct: 361 MVSRGNCPTCNDFILEMLEAF 381

[Close]

BLAST of Carg08901-RA vs. NCBI nr
Match: XP_023534035.1 (E3 ubiquitin-protein ligase RNF8-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 686.8 bits (1771), Expect = 1.1e-193
Identity = 369/381 (96.85%), Postives = 374/381 (98.16%), Query Frame = 0


Query: 1   MPLLEEGRSLAGYTLDDVLANNRFGPPASATSRAAEIRGRTLLDVIRDEEPSAAKGLFGK 60
           MPLLEEGRSLAGYTLDDVLANNRFGPPASAT+RAAEIRGRTLLDVIRDEEPSAAKGLFGK
Sbjct: 1   MPLLEEGRSLAGYTLDDVLANNRFGPPASATARAAEIRGRTLLDVIRDEEPSAAKGLFGK 60

Query: 61  DKRTWKSFREKLRLKRAGSAWVSTVPIPTSDMPFQPKRSLMGKRSQVRFNTPSSRNSTDH 120
           DKRTWKSFREKLRLKRAGSAWVSTVPIPTSDMPFQPKRSLMGKRSQVRFNTPSSRNSTDH
Sbjct: 61  DKRTWKSFREKLRLKRAGSAWVSTVPIPTSDMPFQPKRSLMGKRSQVRFNTPSSRNSTDH 120

Query: 121 SARNPSEESSKSIRRQVSRQSSTMNSSSDSTPFQYDESFDYSSIPDSAPSRMRPQMSRHN 180
           SARNPSEESSKSIRRQVSRQSSTMNSSSDSTPFQYDESFDYSSIPDSAPSRMRPQMSRH 
Sbjct: 121 SARNPSEESSKSIRRQVSRQSSTMNSSSDSTPFQYDESFDYSSIPDSAPSRMRPQMSRHT 180

Query: 181 SIRIPNPTENYTDPSEPDRDNRVRHISSAFSERRMMSARETVAAQEAAD-AAAAAAAEAA 240
           SIRIPNPTENYTD +EPD DNRVRHISSAFSERRMMSARETVAAQEAAD AAAAAAAEAA
Sbjct: 181 SIRIPNPTENYTDLTEPDHDNRVRHISSAFSERRMMSARETVAAQEAADAAAAAAAAEAA 240

Query: 241 EEEKEKEKELNENEDENENVESTTGSEEEEKESPTSEPVRMSLMDLLHETDREMGFEGSN 300
           EEE+EKEKE  +NEDENENVESTTGSEE EKESPTSEPVRMSLMDLLHETDREMGFEGSN
Sbjct: 241 EEEEEKEKE--QNEDENENVESTTGSEEGEKESPTSEPVRMSLMDLLHETDREMGFEGSN 300

Query: 301 YGMGFEEDGFSDEEDVAYEEEDEDDGSGGEFSCCVCMVKHKNAPMAACGHTFCRLCSKEL 360
           YGMGFEEDGFSDEEDVAYEEEDEDDGSGGEFSCCVCMVKHKNAPMAACGHTFCRLCSKEL
Sbjct: 301 YGMGFEEDGFSDEEDVAYEEEDEDDGSGGEFSCCVCMVKHKNAPMAACGHTFCRLCSKEL 360

Query: 361 MVSRGNCPTCNDFILEMLEAF 381
           MVSRGNCPTC+DFILEMLEAF
Sbjct: 361 MVSRGNCPTCSDFILEMLEAF 379

[Close]

BLAST of Carg08901-RA vs. NCBI nr
Match: XP_022995965.1 (E3 ubiquitin-protein ligase rnf8-A-like [Cucurbita maxima])

HSP 1 Score: 679.5 bits (1752), Expect = 1.7e-191
Identity = 368/383 (96.08%), Postives = 371/383 (96.87%), Query Frame = 0


Query: 1   MPLLEEGRSLAGYTLDDVLANNRFGPPASATSRAAEIRGRTLLDVIRDEEPSAAKGLFGK 60
           M LLEEGRSLAGYTLDDVLANNRFGPPASAT+RAAEIRGRTLLDVIRDEEPSAAKGLFGK
Sbjct: 1   MSLLEEGRSLAGYTLDDVLANNRFGPPASATARAAEIRGRTLLDVIRDEEPSAAKGLFGK 60

Query: 61  DKRTWKSFREKLRLKRAGSAWVSTVPIPTSDMPFQPKRSLMGKRSQVRFNTPSSRNSTDH 120
           DKRTWKSFREKLRLKRAGSAWVSTVPIPTSDMPFQPKRSLMGKRSQVRFNTPSSRNSTDH
Sbjct: 61  DKRTWKSFREKLRLKRAGSAWVSTVPIPTSDMPFQPKRSLMGKRSQVRFNTPSSRNSTDH 120

Query: 121 SARNPSEESSKSIRRQVSRQSSTMNSSSDSTPFQYDESFDYSSIPDSAPSRMRPQMSRHN 180
           SARNPSEESSKS RRQVSRQSSTMNSSSDSTPFQYDESFDYSS+PDSAPSRMRPQMSRHN
Sbjct: 121 SARNPSEESSKSFRRQVSRQSSTMNSSSDSTPFQYDESFDYSSVPDSAPSRMRPQMSRHN 180

Query: 181 SIRIPNPTENYTDPSEPDRDNRVRHISSAFSERRMMSARETVAAQEAAD-AAAAAAAEAA 240
           SIRIPNPTENYTDP+E DRDNRVRHISSAFSERRMMSARETVAAQEAAD AAAAAAAEAA
Sbjct: 181 SIRIPNPTENYTDPTESDRDNRVRHISSAFSERRMMSARETVAAQEAADAAAAAAAAEAA 240

Query: 241 EEEKEKEKELN--ENEDENENVESTTGSEEEEKESPTSEPVRMSLMDLLHETDREMGFEG 300
           EEEKEKEKE    ENEDENENVESTTGSEE EK SPTSEPVRMSLMDLLHETDREMGFEG
Sbjct: 241 EEEKEKEKEKEQIENEDENENVESTTGSEEWEKVSPTSEPVRMSLMDLLHETDREMGFEG 300

Query: 301 SNYGMGFEEDGFSDEEDVAYEEEDEDDGSGGEFSCCVCMVKHKNAPMAACGHTFCRLCSK 360
           SNYGMGFEEDGFSDEEDVAY EEDEDDGSGGEFSCCVCMVKHKNAPMA CGHTFCRLCSK
Sbjct: 301 SNYGMGFEEDGFSDEEDVAY-EEDEDDGSGGEFSCCVCMVKHKNAPMAPCGHTFCRLCSK 360

Query: 361 ELMVSRGNCPTCNDFILEMLEAF 381
           ELMVSRGNCPTCNDFILEMLEAF
Sbjct: 361 ELMVSRGNCPTCNDFILEMLEAF 382

[Close]

BLAST of Carg08901-RA vs. NCBI nr
Match: KAA0053347.1 (E3 ubiquitin-protein ligase cblA-like [Cucumis melo var. makuwa] >TYK29191.1 E3 ubiquitin-protein ligase cblA-like [Cucumis melo var. makuwa])

HSP 1 Score: 545.4 bits (1404), Expect = 3.8e-151
Identity = 299/387 (77.26%), Postives = 339/387 (87.60%), Query Frame = 0


Query: 1   MPLLEEGRSLAGYTLDDVLANNRFGPPASATSRAAEIRGRTLLDVIRDEEPSAAKGLFGK 60
           M ++E+GRSLAGYTLDDVLANNR GPP  AT+RA EIRGRTLLD+IRDEEPSA KGLFGK
Sbjct: 1   MSMVEDGRSLAGYTLDDVLANNRLGPP--ATARATEIRGRTLLDIIRDEEPSAGKGLFGK 60

Query: 61  DKRTWKSFREKLRLKRAGSAWVSTVPIPTSDMPFQPKRSLMGKRSQVRFNTPSSRNSTDH 120
           DKRTWKSFR+KLRLKRAGSAWVSTVPIPTSD+P Q KRSL+G+R+Q+RFNT SS+NSTD+
Sbjct: 61  DKRTWKSFRDKLRLKRAGSAWVSTVPIPTSDIPVQTKRSLIGRRNQIRFNTGSSKNSTDN 120

Query: 121 SARNPSEESSKSIRRQVSRQSSTMNSSSDSTPFQYDESFDYSSIPDSAPSR-MRPQMSRH 180
            +R+PSEESSKS RRQ+SRQ+STMNSSSDS+ F YDES +YSS PD+AP R MRPQMSRH
Sbjct: 121 HSRHPSEESSKSTRRQMSRQTSTMNSSSDSSAFHYDESSEYSSSPDAAPVRIMRPQMSRH 180

Query: 181 NSIRIPNPTENYTDPSEPDRDNRVRHISSAFSERRMMSARETVAAQEAAD------AAAA 240
           NS+R+ NP ENYTDP+EPDRDNR+RH  S  S+ RMMSARE VAAQEAAD      AAAA
Sbjct: 181 NSVRVSNPMENYTDPTEPDRDNRIRH--SNLSDHRMMSAREAVAAQEAADAASAAAAAAA 240

Query: 241 AAAEAAEEEKEKEKELNENEDENENVESTTGSEEEEKESPTSEPVRMSLMDLLHETDREM 300
           AAAEAAEEEK++ +  N N +ENE  ESTTGSE EE+ SP SEPVRMSLMDLLHETDREM
Sbjct: 241 AAAEAAEEEKKQNENNNLNGNENEKEESTTGSEGEEESSPASEPVRMSLMDLLHETDREM 300

Query: 301 GFEGSNYGMGFEEDGFSDEEDVAYEEEDEDDGSGGEFSCCVCMVKHKNAPMAACGHTFCR 360
           GFE S+YGMGFEE+ F D+ED  Y EEDED+G+GGEFSCCVCMVKHKNAP+A CGHTFCR
Sbjct: 301 GFERSSYGMGFEENFFEDDEDDEY-EEDEDNGNGGEFSCCVCMVKHKNAPLADCGHTFCR 360

Query: 361 LCSKELMVSRGNCPTCNDFILEMLEAF 381
           LCSKELMVSRGNCPTC++FILE+L+AF
Sbjct: 361 LCSKELMVSRGNCPTCSNFILEILDAF 382

[Close]

BLAST of Carg08901-RA vs. ExPASy TrEMBL
Match: A0A6J1ESA4 (uncharacterized protein LOC111437281 OS=Cucurbita moschata OX=3662 GN=LOC111437281 PE=4 SV=1)

HSP 1 Score: 700.3 bits (1806), Expect = 4.5e-198
Identity = 373/381 (97.90%), Postives = 377/381 (98.95%), Query Frame = 0


Query: 1   MPLLEEGRSLAGYTLDDVLANNRFGPPASATSRAAEIRGRTLLDVIRDEEPSAAKGLFGK 60
           MPL+EEGRSLAGYTLDDVLANNRFGPPASATSRAAEIRGRTLLDVIRDEEP+AAKGLFGK
Sbjct: 1   MPLVEEGRSLAGYTLDDVLANNRFGPPASATSRAAEIRGRTLLDVIRDEEPNAAKGLFGK 60

Query: 61  DKRTWKSFREKLRLKRAGSAWVSTVPIPTSDMPFQPKRSLMGKRSQVRFNTPSSRNSTDH 120
           DKRTWKSFREKLRLKRAGSAWVSTVPIPTSDMPFQPKRSLMGKRSQVRFNTPSSRNSTDH
Sbjct: 61  DKRTWKSFREKLRLKRAGSAWVSTVPIPTSDMPFQPKRSLMGKRSQVRFNTPSSRNSTDH 120

Query: 121 SARNPSEESSKSIRRQVSRQSSTMNSSSDSTPFQYDESFDYSSIPDSAPSRMRPQMSRHN 180
           SARNPSEESSKSIRRQVSRQSSTMNSSSDSTPFQYDESFDYSSIPDSAPSRMRPQMSRHN
Sbjct: 121 SARNPSEESSKSIRRQVSRQSSTMNSSSDSTPFQYDESFDYSSIPDSAPSRMRPQMSRHN 180

Query: 181 SIRIPNPTENYTDPSEPDRDNRVRHISSAFSERRMMSARETVAAQEAAD-AAAAAAAEAA 240
           SIRIPNPTENYTDP+E DRDNRVRHISSAFSERRMMSARETVAAQEAAD AAAAAAAEAA
Sbjct: 181 SIRIPNPTENYTDPTESDRDNRVRHISSAFSERRMMSARETVAAQEAADAAAAAAAAEAA 240

Query: 241 EEEKEKEKELNENEDENENVESTTGSEEEEKESPTSEPVRMSLMDLLHETDREMGFEGSN 300
           EEEKEKEKE NENEDE+ENVESTTGSEE EKESPTSEPVRMSLMDLLHETDREMGFEGSN
Sbjct: 241 EEEKEKEKEQNENEDEDENVESTTGSEEGEKESPTSEPVRMSLMDLLHETDREMGFEGSN 300

Query: 301 YGMGFEEDGFSDEEDVAYEEEDEDDGSGGEFSCCVCMVKHKNAPMAACGHTFCRLCSKEL 360
           YGMGFEEDGFSDEEDVAYEEEDEDDGSGGEFSCCVCMVKHKNAPMAACGHTFCRLCSKEL
Sbjct: 301 YGMGFEEDGFSDEEDVAYEEEDEDDGSGGEFSCCVCMVKHKNAPMAACGHTFCRLCSKEL 360

Query: 361 MVSRGNCPTCNDFILEMLEAF 381
           MVSRGNCPTCNDFILEMLEAF
Sbjct: 361 MVSRGNCPTCNDFILEMLEAF 381

[Close]

BLAST of Carg08901-RA vs. ExPASy TrEMBL
Match: A0A6J1K5D6 (E3 ubiquitin-protein ligase rnf8-A-like OS=Cucurbita maxima OX=3661 GN=LOC111491321 PE=4 SV=1)

HSP 1 Score: 679.5 bits (1752), Expect = 8.2e-192
Identity = 368/383 (96.08%), Postives = 371/383 (96.87%), Query Frame = 0


Query: 1   MPLLEEGRSLAGYTLDDVLANNRFGPPASATSRAAEIRGRTLLDVIRDEEPSAAKGLFGK 60
           M LLEEGRSLAGYTLDDVLANNRFGPPASAT+RAAEIRGRTLLDVIRDEEPSAAKGLFGK
Sbjct: 1   MSLLEEGRSLAGYTLDDVLANNRFGPPASATARAAEIRGRTLLDVIRDEEPSAAKGLFGK 60

Query: 61  DKRTWKSFREKLRLKRAGSAWVSTVPIPTSDMPFQPKRSLMGKRSQVRFNTPSSRNSTDH 120
           DKRTWKSFREKLRLKRAGSAWVSTVPIPTSDMPFQPKRSLMGKRSQVRFNTPSSRNSTDH
Sbjct: 61  DKRTWKSFREKLRLKRAGSAWVSTVPIPTSDMPFQPKRSLMGKRSQVRFNTPSSRNSTDH 120

Query: 121 SARNPSEESSKSIRRQVSRQSSTMNSSSDSTPFQYDESFDYSSIPDSAPSRMRPQMSRHN 180
           SARNPSEESSKS RRQVSRQSSTMNSSSDSTPFQYDESFDYSS+PDSAPSRMRPQMSRHN
Sbjct: 121 SARNPSEESSKSFRRQVSRQSSTMNSSSDSTPFQYDESFDYSSVPDSAPSRMRPQMSRHN 180

Query: 181 SIRIPNPTENYTDPSEPDRDNRVRHISSAFSERRMMSARETVAAQEAAD-AAAAAAAEAA 240
           SIRIPNPTENYTDP+E DRDNRVRHISSAFSERRMMSARETVAAQEAAD AAAAAAAEAA
Sbjct: 181 SIRIPNPTENYTDPTESDRDNRVRHISSAFSERRMMSARETVAAQEAADAAAAAAAAEAA 240

Query: 241 EEEKEKEKELN--ENEDENENVESTTGSEEEEKESPTSEPVRMSLMDLLHETDREMGFEG 300
           EEEKEKEKE    ENEDENENVESTTGSEE EK SPTSEPVRMSLMDLLHETDREMGFEG
Sbjct: 241 EEEKEKEKEKEQIENEDENENVESTTGSEEWEKVSPTSEPVRMSLMDLLHETDREMGFEG 300

Query: 301 SNYGMGFEEDGFSDEEDVAYEEEDEDDGSGGEFSCCVCMVKHKNAPMAACGHTFCRLCSK 360
           SNYGMGFEEDGFSDEEDVAY EEDEDDGSGGEFSCCVCMVKHKNAPMA CGHTFCRLCSK
Sbjct: 301 SNYGMGFEEDGFSDEEDVAY-EEDEDDGSGGEFSCCVCMVKHKNAPMAPCGHTFCRLCSK 360

Query: 361 ELMVSRGNCPTCNDFILEMLEAF 381
           ELMVSRGNCPTCNDFILEMLEAF
Sbjct: 361 ELMVSRGNCPTCNDFILEMLEAF 382

[Close]

BLAST of Carg08901-RA vs. ExPASy TrEMBL
Match: A0A5D3E0G9 (E3 ubiquitin-protein ligase cblA-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold880G00010 PE=4 SV=1)

HSP 1 Score: 545.4 bits (1404), Expect = 1.8e-151
Identity = 299/387 (77.26%), Postives = 339/387 (87.60%), Query Frame = 0


Query: 1   MPLLEEGRSLAGYTLDDVLANNRFGPPASATSRAAEIRGRTLLDVIRDEEPSAAKGLFGK 60
           M ++E+GRSLAGYTLDDVLANNR GPP  AT+RA EIRGRTLLD+IRDEEPSA KGLFGK
Sbjct: 1   MSMVEDGRSLAGYTLDDVLANNRLGPP--ATARATEIRGRTLLDIIRDEEPSAGKGLFGK 60

Query: 61  DKRTWKSFREKLRLKRAGSAWVSTVPIPTSDMPFQPKRSLMGKRSQVRFNTPSSRNSTDH 120
           DKRTWKSFR+KLRLKRAGSAWVSTVPIPTSD+P Q KRSL+G+R+Q+RFNT SS+NSTD+
Sbjct: 61  DKRTWKSFRDKLRLKRAGSAWVSTVPIPTSDIPVQTKRSLIGRRNQIRFNTGSSKNSTDN 120

Query: 121 SARNPSEESSKSIRRQVSRQSSTMNSSSDSTPFQYDESFDYSSIPDSAPSR-MRPQMSRH 180
            +R+PSEESSKS RRQ+SRQ+STMNSSSDS+ F YDES +YSS PD+AP R MRPQMSRH
Sbjct: 121 HSRHPSEESSKSTRRQMSRQTSTMNSSSDSSAFHYDESSEYSSSPDAAPVRIMRPQMSRH 180

Query: 181 NSIRIPNPTENYTDPSEPDRDNRVRHISSAFSERRMMSARETVAAQEAAD------AAAA 240
           NS+R+ NP ENYTDP+EPDRDNR+RH  S  S+ RMMSARE VAAQEAAD      AAAA
Sbjct: 181 NSVRVSNPMENYTDPTEPDRDNRIRH--SNLSDHRMMSAREAVAAQEAADAASAAAAAAA 240

Query: 241 AAAEAAEEEKEKEKELNENEDENENVESTTGSEEEEKESPTSEPVRMSLMDLLHETDREM 300
           AAAEAAEEEK++ +  N N +ENE  ESTTGSE EE+ SP SEPVRMSLMDLLHETDREM
Sbjct: 241 AAAEAAEEEKKQNENNNLNGNENEKEESTTGSEGEEESSPASEPVRMSLMDLLHETDREM 300

Query: 301 GFEGSNYGMGFEEDGFSDEEDVAYEEEDEDDGSGGEFSCCVCMVKHKNAPMAACGHTFCR 360
           GFE S+YGMGFEE+ F D+ED  Y EEDED+G+GGEFSCCVCMVKHKNAP+A CGHTFCR
Sbjct: 301 GFERSSYGMGFEENFFEDDEDDEY-EEDEDNGNGGEFSCCVCMVKHKNAPLADCGHTFCR 360

Query: 361 LCSKELMVSRGNCPTCNDFILEMLEAF 381
           LCSKELMVSRGNCPTC++FILE+L+AF
Sbjct: 361 LCSKELMVSRGNCPTCSNFILEILDAF 382

[Close]

BLAST of Carg08901-RA vs. ExPASy TrEMBL
Match: A0A1S3CNY7 (LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase cblA-like OS=Cucumis melo OX=3656 GN=LOC103503074 PE=4 SV=1)

HSP 1 Score: 536.6 bits (1381), Expect = 8.6e-149
Identity = 294/386 (76.17%), Postives = 335/386 (86.79%), Query Frame = 0


Query: 1   MPLLEEGRSLAGYTLDDVLANNRFGPPASATSRAAEIRGRTLLDVIRDEEPSAAKGLFGK 60
           M ++E+GRSLAGYTLDDVLANNR GPP  AT+RA EIRGRTLLD+IRDEEPSA KGLFGK
Sbjct: 1   MSMVEDGRSLAGYTLDDVLANNRLGPP--ATARATEIRGRTLLDIIRDEEPSAGKGLFGK 60

Query: 61  DKRTWKSFREKLRLKRAGSAWVSTVPIPTSDMPFQPKRSLMGKRSQVRFNTPSSRNSTDH 120
           DKRTWKSFR+KLRLKRAGSAWVSTVPIPTSD+P Q KRSL+G+R+Q+RFNT SS+NSTD+
Sbjct: 61  DKRTWKSFRDKLRLKRAGSAWVSTVPIPTSDIPVQTKRSLIGRRNQIRFNTGSSKNSTDN 120

Query: 121 SARNPSEESSKSIRRQVSRQSSTMNSSSDSTPFQYDESFDYSSIPDSAPSR-MRPQMSRH 180
            +R+PSEESSKS RRQ+SRQ+STMNSSSDS+ F YDES +YSS PD+AP R MRPQMSRH
Sbjct: 121 HSRHPSEESSKSTRRQMSRQTSTMNSSSDSSAFHYDESSEYSSSPDAAPVRIMRPQMSRH 180

Query: 181 NSIRIPNPTENYTDPSEPDRDNRVRHISSAFSERRMMSARETVAAQEAADAAAAAAAEAA 240
           NS+R+ NP ENYTDP+EPDRDNR+RH  S  S+ RMMSARE VAAQEAADAA+AAAA AA
Sbjct: 181 NSVRVSNPMENYTDPTEPDRDNRIRH--SNLSDHRMMSAREAVAAQEAADAASAAAAAAA 240

Query: 241 -----EEEKEKEKELNENEDENENVESTTGSEEEEKESPTSEPVRMSLMDLLHETDREMG 300
                   K++ +  N N +ENE  ESTTGSE EE+ SP SEPVRMSLMDLLHETDREMG
Sbjct: 241 AAGSSRRRKKQNENNNLNGNENEKEESTTGSEGEEESSPASEPVRMSLMDLLHETDREMG 300

Query: 301 FEGSNYGMGFEEDGFSDEEDVAYEEEDEDDGSGGEFSCCVCMVKHKNAPMAACGHTFCRL 360
           FE S+YGMGFEE+ F D+ED  Y EEDED+G+GGEFSCCVCMVKHKNAP+A CGHTFCRL
Sbjct: 301 FERSSYGMGFEENFFEDDEDDEY-EEDEDNGNGGEFSCCVCMVKHKNAPLADCGHTFCRL 360

Query: 361 CSKELMVSRGNCPTCNDFILEMLEAF 381
           CSKELMVSRGNCPTC++FILE+L+AF
Sbjct: 361 CSKELMVSRGNCPTCSNFILEILDAF 381

[Close]

BLAST of Carg08901-RA vs. ExPASy TrEMBL
Match: A0A0A0L944 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G628230 PE=4 SV=1)

HSP 1 Score: 530.8 bits (1366), Expect = 4.7e-147
Identity = 293/387 (75.71%), Postives = 335/387 (86.56%), Query Frame = 0


Query: 1   MPLLEEGRSLAGYTLDDVLANNRFGPPASATSRAAEIRGRTLLDVIRDEEPSAAKGLFGK 60
           M ++E+GRSLAGYTLDDVLANNR GPP  AT+RA EIRGRTLLD+IRDEEPS  KGLFGK
Sbjct: 1   MSMVEDGRSLAGYTLDDVLANNRLGPP--ATARATEIRGRTLLDIIRDEEPSTGKGLFGK 60

Query: 61  DKRTWKSFREKLRLKRAGSAWVSTVPIPTSDMPFQPKRSLMGKRSQVRFNTPSSRNSTDH 120
           DKRTWKSFR+KLRLKRAGSAWVSTVPIPTSD+P   KRSLMG+R+QVRFNT SS+NS D+
Sbjct: 61  DKRTWKSFRDKLRLKRAGSAWVSTVPIPTSDIPVHNKRSLMGRRNQVRFNTGSSKNSPDN 120

Query: 121 SARNPSEESSKSIRRQVSRQSSTMNSSSDSTPFQYDESFDYSSIPDSAPSR-MRPQMSRH 180
            +R+PSEE+SKS RRQ+ RQ+STMNSSSDS+ F YDES +YSS PD+AP R MRPQMSRH
Sbjct: 121 QSRHPSEETSKSTRRQMCRQTSTMNSSSDSSAFHYDESSEYSSSPDAAPVRIMRPQMSRH 180

Query: 181 NSIRIPNPTENYTDPSEPDRDNRVRHISSAFSERRMMSARETVAAQEAAD-----AAAAA 240
           NS+R+ NP ENYTDP+EPDRDNR+RH++   SE RMMSARE VAAQEAAD     AAAAA
Sbjct: 181 NSVRVSNPMENYTDPTEPDRDNRIRHLN--LSEHRMMSAREAVAAQEAADAASAAAAAAA 240

Query: 241 AAEAAEEEKEKEKELNENEDENENVESTTGSEEEEKE-SPTSEPVRMSLMDLLHETDREM 300
           AAEAAEEEK++ +  NE+ +ENE  ESTT SEEEE+E SP SEPVRMSLMDLLHETDREM
Sbjct: 241 AAEAAEEEKKQNENNNESGNENEEEESTTESEEEEEESSPASEPVRMSLMDLLHETDREM 300

Query: 301 GFEGSNYGMGFEEDGFSDEEDVAYEEEDEDDGSGGEFSCCVCMVKHKNAPMAACGHTFCR 360
           GFE S+YGMGFE +   ++ED  Y EEDEDDG+G EFSCCVCMVKHKN P+A+CGHTFCR
Sbjct: 301 GFERSSYGMGFEGNFLEEDEDDEY-EEDEDDGNGEEFSCCVCMVKHKNGPLASCGHTFCR 360

Query: 361 LCSKELMVSRGNCPTCNDFILEMLEAF 381
           LCSKELMVSRGNCPTC++FILE+L+AF
Sbjct: 361 LCSKELMVSRGNCPTCSNFILEILDAF 382

[Close]

BLAST of Carg08901-RA vs. TAIR 10
Match: AT3G07120.1 (RING/U-box superfamily protein )

HSP 1 Score: 214.9 bits (546), Expect = 1.1e-55
Identity = 170/391 (43.48%), Postives = 209/391 (53.45%), Query Frame = 0


Query: 3   LLEEGRSLAGYTLDDVLANNRFGPPASATSRAA---------EIRGRTLLDVIRDEEPSA 62
           L     SLAG +LD VL       P S  S                +TL D+IR+E   A
Sbjct: 4   LKSRSNSLAGLSLDAVLGGEILIEPPSLPSPPPLPSKSLVPHRPTSQTLFDIIREE--YA 63

Query: 63  AKGLFGKDKRTWKSFREKLRLKRAGSAWVSTVPIPTSDMPF-QPKRSLMGKRSQVRFNTP 122
            +G   KD+ TW+ FREKLRLKR GSAW S++ IP SD+    PK      RS       
Sbjct: 64  KEG--HKDRTTWQIFREKLRLKRTGSAWTSSLHIPASDILIPNPKHIGTAFRSH-----S 123

Query: 123 SSRNSTDHSARNPSEESSKSIRRQVSRQSSTMNSSSDSTPFQYDESFDYSSIPDSAPSR- 182
           +  N  D     P  +   S  R +  + S+M   S   P   D+S D S + D  PSR 
Sbjct: 124 AGLNIRDLVHAIPMSDPPGSSGRAMFTRGSSMRVGSSKNP---DDSPDISVLEDGPPSRS 183

Query: 183 MRPQMSRHNSIRIPNPTENYTDPSEPDRDNRVRHISSAFSERRMMSARETVAAQEAADAA 242
            +PQ+SRH+S+R         D SE + +NR RH    F E R MSARE VAAQEAA+A 
Sbjct: 184 FKPQLSRHDSVR---------DHSEGEENNRRRHPIVTFVEERQMSAREAVAAQEAAEAE 243

Query: 243 AAAAAEAAEEEKEKEKELNENEDENENVESTTGSEEEEKESPTSEPVR-MSLMDLLHETD 302
           AAAA  + +E+ + E             E  +G  EE K S  SEP + MSLMDLL ETD
Sbjct: 244 AAAAGGSEDEDDDDE-------------EDDSGETEEMKSSSASEPKQTMSLMDLLEETD 303

Query: 303 REMGFEGSNYGMGFEEDGFSDEEDVAYEEEDEDDGSG-GEFSCCVCMVKHKNAPMAACGH 362
           R+MG  GS Y M  +E+   DEED   EEE +  G G GE SCCVCMVK K A    CGH
Sbjct: 304 RQMGLTGSRYAMDEDEEYEEDEEDENNEEEGDSHGGGEGELSCCVCMVKIKGASFTPCGH 360

Query: 363 TFCRLCSKELMVSRGNCPTCNDFILEMLEAF 381
           TFC+LCSKELM  +G+CP C+ F+LE LE F
Sbjct: 364 TFCKLCSKELMAQKGHCPVCSSFVLEFLEIF 360

[Close]

BLAST of Carg08901-RA vs. TAIR 10
Match: AT3G25030.1 (RING/U-box superfamily protein )

HSP 1 Score: 101.3 bits (251), Expect = 1.8e-21
Identity = 108/382 (28.27%), Postives = 147/382 (38.48%), Query Frame = 0


Query: 1   MPLLEEGRSLAGYTLDDVLA--NNRFGPPASATSRAAEIRGRTLLDVIRDEEPSAAKGLF 60
           M  +E  RS    TL+ +L    NR  P   +   +     R+L++V++ E   +     
Sbjct: 18  MSTVESSRSC--LTLEAILMADKNRTSPQILSPPPSRSQSNRSLVEVMQREHRHS----- 77

Query: 61  GKDKRTWKSFREKLRLKRAGSAWVSTVPIPTSDMPFQPKRSLMGKRSQVRFNTPSSRNST 120
            +DK  WKS REKLRLKR GS W+S+  IP+ D P  P R  +    Q+ F   +S N T
Sbjct: 78  -RDKTAWKSLREKLRLKRNGSVWISSNSIPSLDTPI-PNRDNVS--HQLGFLLSNSGNVT 137

Query: 121 DHSARNPSEESSKSIRRQVSRQSSTMNSSSDSTPFQYDESFDYSSIPDSAPSRMRPQMSR 180
           + +                                        SS+              
Sbjct: 138 EEA----------------------------------------SSV-------------- 197

Query: 181 HNSIRIPNPTENYTDPSEPDRDNRVRHISSAFSERRMMSARETVAAQEAADAAAAAAAEA 240
                                + R+R + +  +E R +SAR                   
Sbjct: 198 ---------------------EGRIR-LGAVLAEERALSAR------------------- 250

Query: 241 AEEEKEKEKELNENEDENENVESTTGSEEEEKESPTSEPVRMSLMDLLHETDREMGFEGS 300
            EEE   E+E+                          EP RMSLM+LL E + +M F   
Sbjct: 258 -EEETPAEREV--------------------------EPARMSLMELLEENEGQMSF--- 250

Query: 301 NYGMGFEEDGFSDEEDVAYEEEDEDDGSGGEFSCCVCMVKHKNAPMAACGHTFCRLCSKE 360
                   DG ++EE  A         +  E SCCVCMV+ K A    CGHTFCRLCS+E
Sbjct: 318 -----VSVDGEAEEEVAAV--------TAAEISCCVCMVRSKGAAFIPCGHTFCRLCSRE 250

Query: 361 LMVSRGNCPTCNDFILEMLEAF 381
           L V RGNCP CN  ILE+L+ F
Sbjct: 378 LWVQRGNCPLCNTTILEVLDLF 250

[Close]

BLAST of Carg08901-RA vs. TAIR 10
Match: AT3G25030.2 (RING/U-box superfamily protein )

HSP 1 Score: 101.3 bits (251), Expect = 1.8e-21
Identity = 108/382 (28.27%), Postives = 147/382 (38.48%), Query Frame = 0


Query: 1   MPLLEEGRSLAGYTLDDVLA--NNRFGPPASATSRAAEIRGRTLLDVIRDEEPSAAKGLF 60
           M  +E  RS    TL+ +L    NR  P   +   +     R+L++V++ E   +     
Sbjct: 18  MSTVESSRSC--LTLEAILMADKNRTSPQILSPPPSRSQSNRSLVEVMQREHRHS----- 77

Query: 61  GKDKRTWKSFREKLRLKRAGSAWVSTVPIPTSDMPFQPKRSLMGKRSQVRFNTPSSRNST 120
            +DK  WKS REKLRLKR GS W+S+  IP+ D P  P R  +    Q+ F   +S N T
Sbjct: 78  -RDKTAWKSLREKLRLKRNGSVWISSNSIPSLDTPI-PNRDNVS--HQLGFLLSNSGNVT 137

Query: 121 DHSARNPSEESSKSIRRQVSRQSSTMNSSSDSTPFQYDESFDYSSIPDSAPSRMRPQMSR 180
           + +                                        SS+              
Sbjct: 138 EEA----------------------------------------SSV-------------- 197

Query: 181 HNSIRIPNPTENYTDPSEPDRDNRVRHISSAFSERRMMSARETVAAQEAADAAAAAAAEA 240
                                + R+R + +  +E R +SAR                   
Sbjct: 198 ---------------------EGRIR-LGAVLAEERALSAR------------------- 250

Query: 241 AEEEKEKEKELNENEDENENVESTTGSEEEEKESPTSEPVRMSLMDLLHETDREMGFEGS 300
            EEE   E+E+                          EP RMSLM+LL E + +M F   
Sbjct: 258 -EEETPAEREV--------------------------EPARMSLMELLEENEGQMSF--- 250

Query: 301 NYGMGFEEDGFSDEEDVAYEEEDEDDGSGGEFSCCVCMVKHKNAPMAACGHTFCRLCSKE 360
                   DG ++EE  A         +  E SCCVCMV+ K A    CGHTFCRLCS+E
Sbjct: 318 -----VSVDGEAEEEVAAV--------TAAEISCCVCMVRSKGAAFIPCGHTFCRLCSRE 250

Query: 361 LMVSRGNCPTCNDFILEMLEAF 381
           L V RGNCP CN  ILE+L+ F
Sbjct: 378 LWVQRGNCPLCNTTILEVLDLF 250

[Close]

BLAST of Carg08901-RA vs. TAIR 10
Match: AT4G13100.1 (RING/U-box superfamily protein )

HSP 1 Score: 83.2 bits (204), Expect = 5.0e-16
Identity = 106/390 (27.18%), Postives = 140/390 (35.90%), Query Frame = 0


Query: 1   MPLLEEGRSLAGYTLDDVL--ANNRFGPPASATSRAAEIRGRTLLDVIRDEEPSAAKGLF 60
           M  +E GRS    TL+D+L    + F    + T+        +LLDV+R E         
Sbjct: 18  MSTVENGRS--SVTLEDILMAETSSFRSLTTPTTPVRNHSSSSLLDVMRRER-------- 77

Query: 61  GKDKRTWKSFREKLRLKRAGSAWVSTVPIPTSDMPFQPKRSLMGKRSQVRFNTPSSRNST 120
            +DK  WKS R+KLRLKR  + W+S+ PIPT                             
Sbjct: 78  RRDKTAWKSLRDKLRLKRTATGWISSNPIPT----------------------------L 137

Query: 121 DHSARNPSEESSKSIRRQVSRQSSTMNSSSDSTPFQYDESFDYSSIPDSAPSRMRPQMSR 180
           D+    P  +S +  R      +S  N SS                              
Sbjct: 138 DNHILTPDNDSHRFNRLGFLLTNSETNRSS------------------------------ 197

Query: 181 HNSIRIPNPTENYTDPSEPDRDNRVRHISSAFSERRMMSARETVAAQEAADAAAAAAAEA 240
                               RD                                   ++A
Sbjct: 198 --------------------RD----------------------------------VSDA 257

Query: 241 AEEEKEKEKELNENEDENENVESTTGSEEEEKESPTSEPVRMSLMDLLHETDREMGFEGS 300
           AEE  E+E  L         + +   +E EE + P     RMSLM+LL + D  M     
Sbjct: 258 AEEAAEREGRL--------RLGTVLAAEREEMQPP-----RMSLMELLEDNDGHM----- 259

Query: 301 NYGMGFEEDGFSDEEDVAYEEEDEDDGSG--------GEFSCCVCMVKHKNAPMAACGHT 360
                +E    S  ++V  E  D  DG G         E  CCVCMV+ K A    CGHT
Sbjct: 318 -----YE---LSARDEVEVEGRDGCDGGGEAVAVTGAAELGCCVCMVRSKGAAFIPCGHT 259

Query: 361 FCRLCSKELMVSRGNCPTCNDFILEMLEAF 381
           FCRLCS+EL V RGNCP CN  IL++L+ F
Sbjct: 378 FCRLCSRELWVQRGNCPLCNTAILQVLDIF 259

[Close]

BLAST of Carg08901-RA vs. TAIR 10
Match: AT4G13100.4 (RING/U-box superfamily protein )

HSP 1 Score: 83.2 bits (204), Expect = 5.0e-16
Identity = 106/390 (27.18%), Postives = 140/390 (35.90%), Query Frame = 0


Query: 1   MPLLEEGRSLAGYTLDDVL--ANNRFGPPASATSRAAEIRGRTLLDVIRDEEPSAAKGLF 60
           M  +E GRS    TL+D+L    + F    + T+        +LLDV+R E         
Sbjct: 15  MSTVENGRS--SVTLEDILMAETSSFRSLTTPTTPVRNHSSSSLLDVMRRER-------- 74

Query: 61  GKDKRTWKSFREKLRLKRAGSAWVSTVPIPTSDMPFQPKRSLMGKRSQVRFNTPSSRNST 120
            +DK  WKS R+KLRLKR  + W+S+ PIPT                             
Sbjct: 75  RRDKTAWKSLRDKLRLKRTATGWISSNPIPT----------------------------L 134

Query: 121 DHSARNPSEESSKSIRRQVSRQSSTMNSSSDSTPFQYDESFDYSSIPDSAPSRMRPQMSR 180
           D+    P  +S +  R      +S  N SS                              
Sbjct: 135 DNHILTPDNDSHRFNRLGFLLTNSETNRSS------------------------------ 194

Query: 181 HNSIRIPNPTENYTDPSEPDRDNRVRHISSAFSERRMMSARETVAAQEAADAAAAAAAEA 240
                               RD                                   ++A
Sbjct: 195 --------------------RD----------------------------------VSDA 254

Query: 241 AEEEKEKEKELNENEDENENVESTTGSEEEEKESPTSEPVRMSLMDLLHETDREMGFEGS 300
           AEE  E+E  L         + +   +E EE + P     RMSLM+LL + D  M     
Sbjct: 255 AEEAAEREGRL--------RLGTVLAAEREEMQPP-----RMSLMELLEDNDGHM----- 256

Query: 301 NYGMGFEEDGFSDEEDVAYEEEDEDDGSG--------GEFSCCVCMVKHKNAPMAACGHT 360
                +E    S  ++V  E  D  DG G         E  CCVCMV+ K A    CGHT
Sbjct: 315 -----YE---LSARDEVEVEGRDGCDGGGEAVAVTGAAELGCCVCMVRSKGAAFIPCGHT 256

Query: 361 FCRLCSKELMVSRGNCPTCNDFILEMLEAF 381
           FCRLCS+EL V RGNCP CN  IL++L+ F
Sbjct: 375 FCRLCSRELWVQRGNCPLCNTAILQVLDIF 256

The following BLAST results are available for this feature:

BLAST of Carg08901-RA vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6606315.1	3.3e-203	100.00	hypothetical protein SDJN03_03632, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022930936.1	9.3e-198	97.90	uncharacterized protein LOC111437281 [Cucurbita moschata]	[more]
XP_023534035.1	1.1e-193	96.85	E3 ubiquitin-protein ligase RNF8-like [Cucurbita pepo subsp. pepo]	[more]
XP_022995965.1	1.7e-191	96.08	E3 ubiquitin-protein ligase rnf8-A-like [Cucurbita maxima]	[more]
KAA0053347.1	3.8e-151	77.26	E3 ubiquitin-protein ligase cblA-like [Cucumis melo var. makuwa] >TYK29191.1 E3 ...	[more]

BLAST of Carg08901-RA vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg08901-RA vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ESA4	4.5e-198	97.90	uncharacterized protein LOC111437281 OS=Cucurbita moschata OX=3662 GN=LOC1114372...	[more]
A0A6J1K5D6	8.2e-192	96.08	E3 ubiquitin-protein ligase rnf8-A-like OS=Cucurbita maxima OX=3661 GN=LOC111491...	[more]
A0A5D3E0G9	1.8e-151	77.26	E3 ubiquitin-protein ligase cblA-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3CNY7	8.6e-149	76.17	LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase cblA-like OS=Cucumis melo OX=36...	[more]
A0A0A0L944	4.7e-147	75.71	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G628230 P...	[more]

BLAST of Carg08901-RA vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G07120.1	1.1e-55	43.48	RING/U-box superfamily protein	[more]
AT3G25030.1	1.8e-21	28.27	RING/U-box superfamily protein	[more]
AT3G25030.2	1.8e-21	28.27	RING/U-box superfamily protein	[more]
AT4G13100.1	5.0e-16	27.18	RING/U-box superfamily protein	[more]
AT4G13100.4	5.0e-16	27.18	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 224..269
None	No IPR available	PFAM	PF13920	zf-C3HC4_3	coord: 331..373 e-value: 1.2E-7 score: 31.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 221..278
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 135..192
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 85..202
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 236..252
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 104..120
None	No IPR available	PANTHER	PTHR46629	OS01G0917900 PROTEIN	coord: 7..380
None	No IPR available	PANTHER	PTHR46629:SF13	OS01G0917900 PROTEIN	coord: 7..380
None	No IPR available	CDD	cd16449	RING-HC	coord: 332..369 e-value: 3.501E-8 score: 47.0769
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 319..376
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 332..369 e-value: 0.0082 score: 25.3
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 332..370 score: 10.763177
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 307..380 e-value: 3.2E-10 score: 41.3

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg08901	Carg08901	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg08901-RA:1	Carg08901-RA:1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg08901-RA:cds	Carg08901-RA:cds	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg08901-RA	Carg08901-RA-protein	polypeptide