Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. ATGACTTGCAGAAGAGAACTCATTTGCCGAGTGATTTCGCCAGTTTTACTTGTTTTAGTCACAATTTTTCTTTTTGAAGGGAATGATCTATTTTGTATACATGTAAAATTGCTTTCATTAAAGAGGCTTTTTCTTGTTTCCCATCTTTAATTGCTTGCTGTGATTTGAATGCTATTTGTTAACATCATTTCTAATTCAGGGATAATGTCTAAGATTGAACTTTTATC mRNA sequence ATGACTTGCAGAAGAGAACTCATTTGCCGAGTGATTTCGCCAGTTTTACTTGTTTTAGTCACAATTTTTCTTTTTGAAGGGAATGATCTATTTTGTATACATGTAAAATTGCTTTCATTAAAGAGGCTTTTTCTTGTTTCCCATCTTTAATTGCTTGCTGTGATTTGAATGCTATTTGTTAACATCATTTCTAATTCAGGGATAATGTCTAAGATTGAACTTTTATC Coding sequence (CDS) ATGACTTGCAGAAGAGAACTCATTTGCCGAGTGATTTCGCCAGTTTTACTTGTTTTAGTCACAATTTTTCTTTTTGAAGGGAATGATCTATTTTGTATACATGTAAAATTGCTTTCATTAAAGAGGCTTTTTCTTGTTTCCCATCTTTAA Protein sequence MTCRRELICRVISPVLLVLVTIFLFEGNDLFCIHVKLLSLKRLFLVSHL
Homology
BLAST of Carg08366-RA vs. NCBI nr
Match: KAG7029800.1 (hypothetical protein SDJN02_08143, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 94.7 bits (234), Expect = 2.3e-16 Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 0
Query: 1 MTCRRELICRVISPVLLVLVTIFLFEGNDLFCIHVKLLSLKRLFLVSHL 50
MTCRRELICRVISPVLLVLVTIFLFEGNDLFCIHVKLLSLKRLFLVSHL
Sbjct: 1 MTCRRELICRVISPVLLVLVTIFLFEGNDLFCIHVKLLSLKRLFLVSHL 49
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAG7029800.1 | 2.3e-16 | 100.00 | hypothetical protein SDJN02_08143, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
Relationships
This mRNA is a part of the following gene feature(s):
| Feature Name | Unique Name | Type |
|---|
| Carg08366 | Carg08366 | gene |
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Carg08366-RA:1 | Carg08366-RA:1 | exon |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Carg08366-RA:cds | Carg08366-RA:cds | CDS |
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Carg08366-RA:three_prime_utr | Carg08366-RA:three_prime_utr | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Carg08366-RA | Carg08366-RA-protein | polypeptide |
|
