Carg04492-RA (mRNA) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg04492-RA
Type	mRNA
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Expansin
Location	Carg_Chr04: 20180730 .. 20181652 (-)
Sequence length	705
RNA-Seq Expression	Carg04492-RA
Synteny	Carg04492-RA

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGCAACTGTTTCAACAGCATTGCTCTCTTTCTTGCTAATAATGTCGTTGGCCGTGGAATGCAGAGAACATAAGGGAGTTTACGGCGGCGGCCCTTGGCAGAGCGCCCACGCCACATTCTACGGCGGCAATGACGCCTCCGGCACTATGGGTATTCAAACTTCAATTTCTTTTTCAGTTAATTTAATTAATTTTTTTTAATCGTATTAATACTTTAGGTATGGTTGCAGGGGGGGCGTGTGGTTACGGCAACTTATACAGCCAGGGGTACGGCGTGAACACGGCAGCATTGAGCACAGCTCTGTTCAACGACGGGTCCAGCTGTGGAGCTTGTTTCGAAATCAAGTGCGTGAATGACCCACAATGGTGCCACGCTGGAAACCCCTCGATTTTCGTGACAGCCACCAACTTTTGTCCTCCCAATTATGCACTCCCTAATGACAACGGCGGGTGGTGCAATCCTCCTCGCCCTCACTTCGACCTGTCCATGCCCATGTTCCTCAAAATCGCCCAATACCGCGCCGGGATCGTCCCCGTCTCGTTTCGCAGGTAAGTATGGCCAAAACATAAATTTTATCGTCGTTTCAGTGACAAATTGTTGATGAGATTATGTATGTTAGATAAACACGACTCTCCACAATTATATGGTATGAATTTTTCATCGTTAAAGATGTATTTATGATTGCAGGGTGGGATGCAGGAGGGAGGGAGGGATAAGGTTTACGATGAATGGGTTCAAATATTTCAATCTGGTACTGATAACCAACGTGGCAGGCGCTGGGGACATTGTGAGTGTGCGCATCAAGGGGTCGAAGACAGGGTGGATGAGCATGACACGTAATTGGGGTCAAAACTGGCAGTCAAACGACGTCTTAGTGGGTCAATCACTGTCGTTTAGTGTTAAAGGCAGCGATGGAAGG

mRNA sequence

ATGGCGGCAACTGTTTCAACAGCATTGCTCTCTTTCTTGCTAATAATGTCGTTGGCCGTGGAATGCAGAGAACATAAGGGAGTTTACGGCGGCGGCCCTTGGCAGAGCGCCCACGCCACATTCTACGGCGGCAATGACGCCTCCGGCACTATGGGGGGGGCGTGTGGTTACGGCAACTTATACAGCCAGGGGTACGGCGTGAACACGGCAGCATTGAGCACAGCTCTGTTCAACGACGGGTCCAGCTGTGGAGCTTGTTTCGAAATCAAGTGCGTGAATGACCCACAATGGTGCCACGCTGGAAACCCCTCGATTTTCGTGACAGCCACCAACTTTTGTCCTCCCAATTATGCACTCCCTAATGACAACGGCGGGTGGTGCAATCCTCCTCGCCCTCACTTCGACCTGTCCATGCCCATGTTCCTCAAAATCGCCCAATACCGCGCCGGGATCGTCCCCGTCTCGTTTCGCAGGGTGGGATGCAGGAGGGAGGGAGGGATAAGGTTTACGATGAATGGGTTCAAATATTTCAATCTGGTACTGATAACCAACGTGGCAGGCGCTGGGGACATTGTGAGTGTGCGCATCAAGGGGTCGAAGACAGGGTGGATGAGCATGACACGTAATTGGGGTCAAAACTGGCAGTCAAACGACGTCTTAGTGGGTCAATCACTGTCGTTTAGTGTTAAAGGCAGCGATGGAAGG

Coding sequence (CDS)

ATGGCGGCAACTGTTTCAACAGCATTGCTCTCTTTCTTGCTAATAATGTCGTTGGCCGTGGAATGCAGAGAACATAAGGGAGTTTACGGCGGCGGCCCTTGGCAGAGCGCCCACGCCACATTCTACGGCGGCAATGACGCCTCCGGCACTATGGGGGGGGCGTGTGGTTACGGCAACTTATACAGCCAGGGGTACGGCGTGAACACGGCAGCATTGAGCACAGCTCTGTTCAACGACGGGTCCAGCTGTGGAGCTTGTTTCGAAATCAAGTGCGTGAATGACCCACAATGGTGCCACGCTGGAAACCCCTCGATTTTCGTGACAGCCACCAACTTTTGTCCTCCCAATTATGCACTCCCTAATGACAACGGCGGGTGGTGCAATCCTCCTCGCCCTCACTTCGACCTGTCCATGCCCATGTTCCTCAAAATCGCCCAATACCGCGCCGGGATCGTCCCCGTCTCGTTTCGCAGGGTGGGATGCAGGAGGGAGGGAGGGATAAGGTTTACGATGAATGGGTTCAAATATTTCAATCTGGTACTGATAACCAACGTGGCAGGCGCTGGGGACATTGTGAGTGTGCGCATCAAGGGGTCGAAGACAGGGTGGATGAGCATGACACGTAATTGGGGTCAAAACTGGCAGTCAAACGACGTCTTAGTGGGTCAATCACTGTCGTTTAGTGTTAAAGGCAGCGATGGAAGG

Protein sequence

MAATVSTALLSFLLIMSLAVECREHKGVYGGGPWQSAHATFYGGNDASGTMGGACGYGNLYSQGYGVNTAALSTALFNDGSSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPPNYALPNDNGGWCNPPRPHFDLSMPMFLKIAQYRAGIVPVSFRRVGCRREGGIRFTMNGFKYFNLVLITNVAGAGDIVSVRIKGSKTGWMSMTRNWGQNWQSNDVLVGQSLSFSVKGSDGR

Homology

[Close]

BLAST of Carg04492-RA vs. NCBI nr
Match: KAG7033061.1 (Expansin-A16, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 495.4 bits (1274), Expect = 2.8e-136
Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0


Query: 1   MAATVSTALLSFLLIMSLAVECREHKGVYGGGPWQSAHATFYGGNDASGTMGGACGYGNL 60
           MAATVSTALLSFLLIMSLAVECREHKGVYGGGPWQSAHATFYGGNDASGTMGGACGYGNL
Sbjct: 1   MAATVSTALLSFLLIMSLAVECREHKGVYGGGPWQSAHATFYGGNDASGTMGGACGYGNL 60

Query: 61  YSQGYGVNTAALSTALFNDGSSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPPNYALP 120
           YSQGYGVNTAALSTALFNDGSSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPPNYALP
Sbjct: 61  YSQGYGVNTAALSTALFNDGSSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPPNYALP 120

Query: 121 NDNGGWCNPPRPHFDLSMPMFLKIAQYRAGIVPVSFRRVGCRREGGIRFTMNGFKYFNLV 180
           NDNGGWCNPPRPHFDLSMPMFLKIAQYRAGIVPVSFRRVGCRREGGIRFTMNGFKYFNLV
Sbjct: 121 NDNGGWCNPPRPHFDLSMPMFLKIAQYRAGIVPVSFRRVGCRREGGIRFTMNGFKYFNLV 180

Query: 181 LITNVAGAGDIVSVRIKGSKTGWMSMTRNWGQNWQSNDVLVGQSLSFSVKGSDGR 236
           LITNVAGAGDIVSVRIKGSKTGWMSMTRNWGQNWQSNDVLVGQSLSFSVKGSDGR
Sbjct: 181 LITNVAGAGDIVSVRIKGSKTGWMSMTRNWGQNWQSNDVLVGQSLSFSVKGSDGR 235

[Close]

BLAST of Carg04492-RA vs. NCBI nr
Match: XP_022960594.1 (expansin-A4-like [Cucurbita moschata])

HSP 1 Score: 493.0 bits (1268), Expect = 1.4e-135
Identity = 234/235 (99.57%), Postives = 234/235 (99.57%), Query Frame = 0


Query: 1   MAATVSTALLSFLLIMSLAVECREHKGVYGGGPWQSAHATFYGGNDASGTMGGACGYGNL 60
           MAATVSTALLSFLLIMSLAVECREHKGVYGGGPWQSAHATFYGGNDASGTMGGACGYGNL
Sbjct: 1   MAATVSTALLSFLLIMSLAVECREHKGVYGGGPWQSAHATFYGGNDASGTMGGACGYGNL 60

Query: 61  YSQGYGVNTAALSTALFNDGSSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPPNYALP 120
           YSQGYGVNTAALSTALFNDGSSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPPNYALP
Sbjct: 61  YSQGYGVNTAALSTALFNDGSSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPPNYALP 120

Query: 121 NDNGGWCNPPRPHFDLSMPMFLKIAQYRAGIVPVSFRRVGCRREGGIRFTMNGFKYFNLV 180
           NDNGGWCNPPRPHFDLSMPMFLKIAQYRAGIVPVSFRRVGCRREGGIRFTMNGFKYFNLV
Sbjct: 121 NDNGGWCNPPRPHFDLSMPMFLKIAQYRAGIVPVSFRRVGCRREGGIRFTMNGFKYFNLV 180

Query: 181 LITNVAGAGDIVSVRIKGSKTGWMSMTRNWGQNWQSNDVLVGQSLSFSVKGSDGR 236
           LITNVAGAGDIVSVRIKGSKTGWMSMTRNWGQNWQSNDVLVGQSLS SVKGSDGR
Sbjct: 181 LITNVAGAGDIVSVRIKGSKTGWMSMTRNWGQNWQSNDVLVGQSLSLSVKGSDGR 235

[Close]

BLAST of Carg04492-RA vs. NCBI nr
Match: XP_023528847.1 (expansin-A4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 488.8 bits (1257), Expect = 2.6e-134
Identity = 230/235 (97.87%), Postives = 234/235 (99.57%), Query Frame = 0


Query: 1   MAATVSTALLSFLLIMSLAVECREHKGVYGGGPWQSAHATFYGGNDASGTMGGACGYGNL 60
           MAATVSTALLSFLLIMSLAVECR+H GVYGGGPWQSAHATFYGGNDASGTMGGACGYGNL
Sbjct: 1   MAATVSTALLSFLLIMSLAVECRQHNGVYGGGPWQSAHATFYGGNDASGTMGGACGYGNL 60

Query: 61  YSQGYGVNTAALSTALFNDGSSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPPNYALP 120
           YSQGYGVNTAALSTALFNDGSSCGACF+IKCVNDPQWCHAGNPSIFVTATNFCPPNYALP
Sbjct: 61  YSQGYGVNTAALSTALFNDGSSCGACFQIKCVNDPQWCHAGNPSIFVTATNFCPPNYALP 120

Query: 121 NDNGGWCNPPRPHFDLSMPMFLKIAQYRAGIVPVSFRRVGCRREGGIRFTMNGFKYFNLV 180
           NDNGGWCNPPRPHFDLSMPMFLKIAQYRAGIVPVSFRRVGC+REGG+RFTMNGFKYFNLV
Sbjct: 121 NDNGGWCNPPRPHFDLSMPMFLKIAQYRAGIVPVSFRRVGCKREGGMRFTMNGFKYFNLV 180

Query: 181 LITNVAGAGDIVSVRIKGSKTGWMSMTRNWGQNWQSNDVLVGQSLSFSVKGSDGR 236
           LITNVAGAGDIVSVRIKGSKTGWMSMTRNWGQNWQSNDVLVGQSLSFSVKGSDGR
Sbjct: 181 LITNVAGAGDIVSVRIKGSKTGWMSMTRNWGQNWQSNDVLVGQSLSFSVKGSDGR 235

[Close]

BLAST of Carg04492-RA vs. NCBI nr
Match: XP_022990131.1 (expansin-A4-like [Cucurbita maxima])

HSP 1 Score: 488.4 bits (1256), Expect = 3.4e-134
Identity = 230/235 (97.87%), Postives = 233/235 (99.15%), Query Frame = 0


Query: 1   MAATVSTALLSFLLIMSLAVECREHKGVYGGGPWQSAHATFYGGNDASGTMGGACGYGNL 60
           MAATVSTAL+SFLLIMSLAVECREHKGVYGGGPW SAHATFYGGNDASGTMGGACGYGNL
Sbjct: 1   MAATVSTALISFLLIMSLAVECREHKGVYGGGPWHSAHATFYGGNDASGTMGGACGYGNL 60

Query: 61  YSQGYGVNTAALSTALFNDGSSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPPNYALP 120
           Y+QGYGVNTAALS ALFNDGSSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPPNYALP
Sbjct: 61  YTQGYGVNTAALSAALFNDGSSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPPNYALP 120

Query: 121 NDNGGWCNPPRPHFDLSMPMFLKIAQYRAGIVPVSFRRVGCRREGGIRFTMNGFKYFNLV 180
           NDNGGWCNPPRPHFDLSMPMFLKIAQYRAGIVPVSFRRVGCRREGG+RFTMNGFKYFNLV
Sbjct: 121 NDNGGWCNPPRPHFDLSMPMFLKIAQYRAGIVPVSFRRVGCRREGGMRFTMNGFKYFNLV 180

Query: 181 LITNVAGAGDIVSVRIKGSKTGWMSMTRNWGQNWQSNDVLVGQSLSFSVKGSDGR 236
           LITNVAGAGDIVSVRIKGSKTGWMSMTRNWGQNWQSNDVLVGQSLSFSVKGSDGR
Sbjct: 181 LITNVAGAGDIVSVRIKGSKTGWMSMTRNWGQNWQSNDVLVGQSLSFSVKGSDGR 235

[Close]

BLAST of Carg04492-RA vs. NCBI nr
Match: XP_008458865.1 (PREDICTED: expansin-A4 [Cucumis melo] >QDL52551.1 expansin A9 [Cucumis melo])

HSP 1 Score: 434.9 bits (1117), Expect = 4.5e-118
Identity = 209/240 (87.08%), Postives = 218/240 (90.83%), Query Frame = 0


Query: 1   MAATVSTALL----SFLLIMSLAVECRE-HKGVYGGGPWQSAHATFYGGNDASGTMGGAC 60
           MA T+ST  L    +FLL MSL +E R    G+YG GPWQ+AHATFYGGNDA+GTMGGAC
Sbjct: 1   MAPTISTIFLILFSNFLLTMSLPIENRALIGGLYGAGPWQNAHATFYGGNDAAGTMGGAC 60

Query: 61  GYGNLYSQGYGVNTAALSTALFNDGSSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPP 120
           GYGNLYSQGYGVNTAALSTALFNDG SCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPP
Sbjct: 61  GYGNLYSQGYGVNTAALSTALFNDGYSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPP 120

Query: 121 NYALPNDNGGWCNPPRPHFDLSMPMFLKIAQYRAGIVPVSFRRVGCRREGGIRFTMNGFK 180
           NYALPNDNGGWCNPPRPHFDLSMPMFLKIAQYRAGIVPVSFRRV CRREGG+RFT+NGFK
Sbjct: 121 NYALPNDNGGWCNPPRPHFDLSMPMFLKIAQYRAGIVPVSFRRVACRREGGMRFTINGFK 180

Query: 181 YFNLVLITNVAGAGDIVSVRIKGSKTGWMSMTRNWGQNWQSNDVLVGQSLSFSVKGSDGR 236
           YFNLVLITNVAGAGDI SV IKGSKTGWMSMTRNWGQNWQSN VLVGQ+LSF VK SDGR
Sbjct: 181 YFNLVLITNVAGAGDIASVSIKGSKTGWMSMTRNWGQNWQSNTVLVGQTLSFRVKSSDGR 240

[Close]

BLAST of Carg04492-RA vs. ExPASy Swiss-Prot
Match: Q852A1 (Expansin-A7 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPA7 PE=2 SV=1)

HSP 1 Score: 382.5 bits (981), Expect = 3.5e-105
Identity = 173/211 (81.99%), Postives = 190/211 (90.05%), Query Frame = 0


Query: 27  GVYGGGPWQSAHATFYGGNDASGTMGGACGYGNLYSQGYGVNTAALSTALFNDGSSCGAC 86
           G YGGG WQSAHATFYGG+DASGTMGGACGYGNLYSQGYGVN AALSTALFN G SCGAC
Sbjct: 29  GAYGGGEWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNNAALSTALFNSGQSCGAC 88

Query: 87  FEIKCVNDP--QWCHAGNPSIFVTATNFCPPNYALPNDNGGWCNPPRPHFDLSMPMFLKI 146
           FEIKCVN P  +WCH G+PSI +TATNFCPPNYALP+DNGGWCNPPRPHFDL+MPMFL I
Sbjct: 89  FEIKCVNQPGWEWCHPGSPSILITATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLHI 148

Query: 147 AQYRAGIVPVSFRRVGCRREGGIRFTMNGFKYFNLVLITNVAGAGDIVSVRIKGSKTGWM 206
           A+YRAGIVPVS+RRV CR++GG+RFT+NGF+YFNLVLITNVAGAGDIV   +KG+ TGWM
Sbjct: 149 AEYRAGIVPVSYRRVPCRKKGGVRFTINGFRYFNLVLITNVAGAGDIVRASVKGTSTGWM 208

Query: 207 SMTRNWGQNWQSNDVLVGQSLSFSVKGSDGR 236
            M+RNWGQNWQSN VLVGQ+LSF V GSD R
Sbjct: 209 PMSRNWGQNWQSNSVLVGQALSFRVTGSDRR 239

[Close]

BLAST of Carg04492-RA vs. ExPASy Swiss-Prot
Match: Q38865 (Expansin-A6 OS=Arabidopsis thaliana OX=3702 GN=EXPA6 PE=2 SV=2)

HSP 1 Score: 380.6 bits (976), Expect = 1.3e-104
Identity = 173/227 (76.21%), Postives = 200/227 (88.11%), Query Frame = 0


Query: 9   LLSFLLIMSLAVECREHKGVYGGGPWQSAHATFYGGNDASGTMGGACGYGNLYSQGYGVN 68
           L+  +L   LA+      GVY GG W++AHATFYGG+DASGTMGGACGYGNLYSQGYGVN
Sbjct: 6   LVLSVLTTILALSEARIPGVYNGGGWETAHATFYGGSDASGTMGGACGYGNLYSQGYGVN 65

Query: 69  TAALSTALFNDGSSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPPNYALPNDNGGWCN 128
           TAALSTALFN+G SCGACFE+KC +DP+WCH+G+PSIF+TATNFCPPN+A P+DNGGWCN
Sbjct: 66  TAALSTALFNNGFSCGACFELKCASDPKWCHSGSPSIFITATNFCPPNFAQPSDNGGWCN 125

Query: 129 PPRPHFDLSMPMFLKIAQYRAGIVPVSFRRVGCRREGGIRFTMNGFKYFNLVLITNVAGA 188
           PPRPHFDL+MPMFLKIA+YRAGIVPVSFRRV CR+ GGIRFT+NGF+YFNLVL+TNVAGA
Sbjct: 126 PPRPHFDLAMPMFLKIAEYRAGIVPVSFRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGA 185

Query: 189 GDIVSVRIKGSKTGWMSMTRNWGQNWQSNDVLVGQSLSFSVKGSDGR 236
           G+IV + +KG+ T WM+M+RNWGQNWQSN VLVGQSLSF V  SD R
Sbjct: 186 GNIVRLGVKGTHTSWMTMSRNWGQNWQSNSVLVGQSLSFRVTSSDRR 232

[Close]

BLAST of Carg04492-RA vs. ExPASy Swiss-Prot
Match: O48818 (Expansin-A4 OS=Arabidopsis thaliana OX=3702 GN=EXPA4 PE=1 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 1.7e-104
Identity = 170/209 (81.34%), Postives = 190/209 (90.91%), Query Frame = 0


Query: 27  GVYGGGPWQSAHATFYGGNDASGTMGGACGYGNLYSQGYGVNTAALSTALFNDGSSCGAC 86
           G+Y GG WQ+AHATFYGG+DASGTMGGACGYGNLYSQGYG NTAALSTALFN+G SCGAC
Sbjct: 24  GIYSGGAWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGMSCGAC 83

Query: 87  FEIKCVNDPQWCHAGNPSIFVTATNFCPPNYALPNDNGGWCNPPRPHFDLSMPMFLKIAQ 146
           FE+KC NDPQWCH+G+PSI +TATNFCPPN A P+DNGGWCNPPR HFDL+MP+FLKIAQ
Sbjct: 84  FELKCANDPQWCHSGSPSILITATNFCPPNLAQPSDNGGWCNPPREHFDLAMPVFLKIAQ 143

Query: 147 YRAGIVPVSFRRVGCRREGGIRFTMNGFKYFNLVLITNVAGAGDIVSVRIKGSKTGWMSM 206
           YRAGIVPVS+RRV CR+ GGIRFT+NG +YFNLVLITNVAGAGDIV   +KGS+TGWMS+
Sbjct: 144 YRAGIVPVSYRRVPCRKRGGIRFTINGHRYFNLVLITNVAGAGDIVRASVKGSRTGWMSL 203

Query: 207 TRNWGQNWQSNDVLVGQSLSFSVKGSDGR 236
           +RNWGQNWQSN VLVGQ+LSF V GSD R
Sbjct: 204 SRNWGQNWQSNAVLVGQALSFRVTGSDRR 232

[Close]

BLAST of Carg04492-RA vs. ExPASy Swiss-Prot
Match: Q9M2S9 (Expansin-A16 OS=Arabidopsis thaliana OX=3702 GN=EXPA16 PE=2 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 2.9e-104
Identity = 177/235 (75.32%), Postives = 195/235 (82.98%), Query Frame = 0


Query: 1   MAATVSTALLSFLLIMSLAVECREHKGVYGGGPWQSAHATFYGGNDASGTMGGACGYGNL 60
           MA      L  F L + L+        V+ GG WQ+AHATFYGGNDASGTMGGACGYGNL
Sbjct: 1   MAINPLILLTIFPLFLLLSFTDAGIPRVFSGGSWQTAHATFYGGNDASGTMGGACGYGNL 60

Query: 61  YSQGYGVNTAALSTALFNDGSSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPPNYALP 120
           YSQGYG NTAALST+LFN G SCGACFEIKCVNDP+WCH GNPS+FVTATNFCPPN A P
Sbjct: 61  YSQGYGTNTAALSTSLFNSGQSCGACFEIKCVNDPKWCHPGNPSVFVTATNFCPPNLAQP 120

Query: 121 NDNGGWCNPPRPHFDLSMPMFLKIAQYRAGIVPVSFRRVGCRREGGIRFTMNGFKYFNLV 180
           +DNGGWCNPPR HFDL+MP+FLKIA+YRAGIVP+S+RRV CR+ GGIRFT+NG +YFNLV
Sbjct: 121 SDNGGWCNPPRSHFDLAMPVFLKIAEYRAGIVPISYRRVACRKSGGIRFTINGHRYFNLV 180

Query: 181 LITNVAGAGDIVSVRIKGSKTGWMSMTRNWGQNWQSNDVLVGQSLSFSVKGSDGR 236
           LITNVAGAGDI    +KGSKTGWMS+TRNWGQNWQSN VLVGQSLSF V  SD R
Sbjct: 181 LITNVAGAGDIARTSVKGSKTGWMSLTRNWGQNWQSNAVLVGQSLSFRVTSSDRR 235

[Close]

BLAST of Carg04492-RA vs. ExPASy Swiss-Prot
Match: O80932 (Expansin-A3 OS=Arabidopsis thaliana OX=3702 GN=EXPA3 PE=2 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 8.0e-102
Identity = 169/209 (80.86%), Postives = 187/209 (89.47%), Query Frame = 0


Query: 27  GVYGGGPWQSAHATFYGGNDASGTMGGACGYGNLYSQGYGVNTAALSTALFNDGSSCGAC 86
           GVY GGPWQ+AHATFYGG+DASGTMGGACGYGNLYSQGYGVNTAALSTALFN+G SCGAC
Sbjct: 29  GVYSGGPWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGFSCGAC 88

Query: 87  FEIKCVNDPQWCHAGNPSIFVTATNFCPPNYALPNDNGGWCNPPRPHFDLSMPMFLKIAQ 146
           FEIKC +DP+WC  GNPSI VTATNFCPPN+A P+D+GGWCNPPR HFDL+MPMFLKI  
Sbjct: 89  FEIKCTDDPRWCVPGNPSILVTATNFCPPNFAQPSDDGGWCNPPREHFDLAMPMFLKIGL 148

Query: 147 YRAGIVPVSFRRVGCRREGGIRFTMNGFKYFNLVLITNVAGAGDIVSVRIKGSKTGWMSM 206
           YRAGIVPVS+RRV CR+ GGIRFT+NGF+YFNLVL+TNVAGAGDI  V +KGSKT W+ M
Sbjct: 149 YRAGIVPVSYRRVPCRKIGGIRFTVNGFRYFNLVLVTNVAGAGDINGVSVKGSKTDWVRM 208

Query: 207 TRNWGQNWQSNDVLVGQSLSFSVKGSDGR 236
           +RNWGQNWQSN VL+GQSLSF V  SD R
Sbjct: 209 SRNWGQNWQSNAVLIGQSLSFRVTASDRR 237

[Close]

BLAST of Carg04492-RA vs. ExPASy TrEMBL
Match: A0A6J1HBG2 (Expansin OS=Cucurbita moschata OX=3662 GN=LOC111461326 PE=3 SV=1)

HSP 1 Score: 493.0 bits (1268), Expect = 6.7e-136
Identity = 234/235 (99.57%), Postives = 234/235 (99.57%), Query Frame = 0


Query: 1   MAATVSTALLSFLLIMSLAVECREHKGVYGGGPWQSAHATFYGGNDASGTMGGACGYGNL 60
           MAATVSTALLSFLLIMSLAVECREHKGVYGGGPWQSAHATFYGGNDASGTMGGACGYGNL
Sbjct: 1   MAATVSTALLSFLLIMSLAVECREHKGVYGGGPWQSAHATFYGGNDASGTMGGACGYGNL 60

Query: 61  YSQGYGVNTAALSTALFNDGSSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPPNYALP 120
           YSQGYGVNTAALSTALFNDGSSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPPNYALP
Sbjct: 61  YSQGYGVNTAALSTALFNDGSSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPPNYALP 120

Query: 121 NDNGGWCNPPRPHFDLSMPMFLKIAQYRAGIVPVSFRRVGCRREGGIRFTMNGFKYFNLV 180
           NDNGGWCNPPRPHFDLSMPMFLKIAQYRAGIVPVSFRRVGCRREGGIRFTMNGFKYFNLV
Sbjct: 121 NDNGGWCNPPRPHFDLSMPMFLKIAQYRAGIVPVSFRRVGCRREGGIRFTMNGFKYFNLV 180

Query: 181 LITNVAGAGDIVSVRIKGSKTGWMSMTRNWGQNWQSNDVLVGQSLSFSVKGSDGR 236
           LITNVAGAGDIVSVRIKGSKTGWMSMTRNWGQNWQSNDVLVGQSLS SVKGSDGR
Sbjct: 181 LITNVAGAGDIVSVRIKGSKTGWMSMTRNWGQNWQSNDVLVGQSLSLSVKGSDGR 235

[Close]

BLAST of Carg04492-RA vs. ExPASy TrEMBL
Match: A0A6J1JM34 (Expansin OS=Cucurbita maxima OX=3661 GN=LOC111487115 PE=3 SV=1)

HSP 1 Score: 488.4 bits (1256), Expect = 1.7e-134
Identity = 230/235 (97.87%), Postives = 233/235 (99.15%), Query Frame = 0


Query: 1   MAATVSTALLSFLLIMSLAVECREHKGVYGGGPWQSAHATFYGGNDASGTMGGACGYGNL 60
           MAATVSTAL+SFLLIMSLAVECREHKGVYGGGPW SAHATFYGGNDASGTMGGACGYGNL
Sbjct: 1   MAATVSTALISFLLIMSLAVECREHKGVYGGGPWHSAHATFYGGNDASGTMGGACGYGNL 60

Query: 61  YSQGYGVNTAALSTALFNDGSSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPPNYALP 120
           Y+QGYGVNTAALS ALFNDGSSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPPNYALP
Sbjct: 61  YTQGYGVNTAALSAALFNDGSSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPPNYALP 120

Query: 121 NDNGGWCNPPRPHFDLSMPMFLKIAQYRAGIVPVSFRRVGCRREGGIRFTMNGFKYFNLV 180
           NDNGGWCNPPRPHFDLSMPMFLKIAQYRAGIVPVSFRRVGCRREGG+RFTMNGFKYFNLV
Sbjct: 121 NDNGGWCNPPRPHFDLSMPMFLKIAQYRAGIVPVSFRRVGCRREGGMRFTMNGFKYFNLV 180

Query: 181 LITNVAGAGDIVSVRIKGSKTGWMSMTRNWGQNWQSNDVLVGQSLSFSVKGSDGR 236
           LITNVAGAGDIVSVRIKGSKTGWMSMTRNWGQNWQSNDVLVGQSLSFSVKGSDGR
Sbjct: 181 LITNVAGAGDIVSVRIKGSKTGWMSMTRNWGQNWQSNDVLVGQSLSFSVKGSDGR 235

[Close]

BLAST of Carg04492-RA vs. ExPASy TrEMBL
Match: A0A1S3C8Z5 (Expansin OS=Cucumis melo OX=3656 GN=LOC103498141 PE=2 SV=1)

HSP 1 Score: 434.9 bits (1117), Expect = 2.2e-118
Identity = 209/240 (87.08%), Postives = 218/240 (90.83%), Query Frame = 0


Query: 1   MAATVSTALL----SFLLIMSLAVECRE-HKGVYGGGPWQSAHATFYGGNDASGTMGGAC 60
           MA T+ST  L    +FLL MSL +E R    G+YG GPWQ+AHATFYGGNDA+GTMGGAC
Sbjct: 1   MAPTISTIFLILFSNFLLTMSLPIENRALIGGLYGAGPWQNAHATFYGGNDAAGTMGGAC 60

Query: 61  GYGNLYSQGYGVNTAALSTALFNDGSSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPP 120
           GYGNLYSQGYGVNTAALSTALFNDG SCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPP
Sbjct: 61  GYGNLYSQGYGVNTAALSTALFNDGYSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPP 120

Query: 121 NYALPNDNGGWCNPPRPHFDLSMPMFLKIAQYRAGIVPVSFRRVGCRREGGIRFTMNGFK 180
           NYALPNDNGGWCNPPRPHFDLSMPMFLKIAQYRAGIVPVSFRRV CRREGG+RFT+NGFK
Sbjct: 121 NYALPNDNGGWCNPPRPHFDLSMPMFLKIAQYRAGIVPVSFRRVACRREGGMRFTINGFK 180

Query: 181 YFNLVLITNVAGAGDIVSVRIKGSKTGWMSMTRNWGQNWQSNDVLVGQSLSFSVKGSDGR 236
           YFNLVLITNVAGAGDI SV IKGSKTGWMSMTRNWGQNWQSN VLVGQ+LSF VK SDGR
Sbjct: 181 YFNLVLITNVAGAGDIASVSIKGSKTGWMSMTRNWGQNWQSNTVLVGQTLSFRVKSSDGR 240

[Close]

BLAST of Carg04492-RA vs. ExPASy TrEMBL
Match: A0A5D3DGP3 (Expansin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold311G00190 PE=3 SV=1)

HSP 1 Score: 426.8 bits (1096), Expect = 5.9e-116
Identity = 200/221 (90.50%), Postives = 207/221 (93.67%), Query Frame = 0


Query: 16  MSLAVECRE-HKGVYGGGPWQSAHATFYGGNDASGTMGGACGYGNLYSQGYGVNTAALST 75
           MSL +E R    G+YG GPWQ+AHATFYGGNDA+GTMGGACGYGNLYSQGYGVNTAALST
Sbjct: 1   MSLPIENRALIGGLYGAGPWQNAHATFYGGNDAAGTMGGACGYGNLYSQGYGVNTAALST 60

Query: 76  ALFNDGSSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPPNYALPNDNGGWCNPPRPHF 135
           ALFNDG SCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPPNYALPNDNGGWCNPPRPHF
Sbjct: 61  ALFNDGYSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPPNYALPNDNGGWCNPPRPHF 120

Query: 136 DLSMPMFLKIAQYRAGIVPVSFRRVGCRREGGIRFTMNGFKYFNLVLITNVAGAGDIVSV 195
           DLSMPMFLKIAQYRAGIVPVSFRRV CRREGG+RFT+NGFKYFNLVLITNVAGAGDI SV
Sbjct: 121 DLSMPMFLKIAQYRAGIVPVSFRRVACRREGGMRFTINGFKYFNLVLITNVAGAGDIASV 180

Query: 196 RIKGSKTGWMSMTRNWGQNWQSNDVLVGQSLSFSVKGSDGR 236
            IKGSKTGWMSMTRNWGQNWQSN VLVGQ+LSF VK SDGR
Sbjct: 181 SIKGSKTGWMSMTRNWGQNWQSNTVLVGQTLSFRVKSSDGR 221

[Close]

BLAST of Carg04492-RA vs. ExPASy TrEMBL
Match: A0A0A0KNX4 (Expansin OS=Cucumis sativus OX=3659 GN=Csa_5G517210 PE=3 SV=1)

HSP 1 Score: 426.8 bits (1096), Expect = 5.9e-116
Identity = 206/240 (85.83%), Postives = 214/240 (89.17%), Query Frame = 0


Query: 1   MAATVSTALL----SFLLIMSLAVECRE-HKGVYGGGPWQSAHATFYGGNDASGTMGGAC 60
           M  T+ST  L    +FLL MSL  E R    G++G GPW +AHATFYGGNDA+GTMGGAC
Sbjct: 1   MVPTISTIFLISFSNFLLTMSLPFENRALIGGLHGAGPWHNAHATFYGGNDAAGTMGGAC 60

Query: 61  GYGNLYSQGYGVNTAALSTALFNDGSSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPP 120
           GYGNLYSQGYGVNTAALSTALFNDG SCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPP
Sbjct: 61  GYGNLYSQGYGVNTAALSTALFNDGYSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPP 120

Query: 121 NYALPNDNGGWCNPPRPHFDLSMPMFLKIAQYRAGIVPVSFRRVGCRREGGIRFTMNGFK 180
           NYALPNDNGGWCNPPRPHFDLSMPMFLKIAQYRAGIVPVSFRRV CRREGG+RFT+NGFK
Sbjct: 121 NYALPNDNGGWCNPPRPHFDLSMPMFLKIAQYRAGIVPVSFRRVACRREGGMRFTINGFK 180

Query: 181 YFNLVLITNVAGAGDIVSVRIKGSKTGWMSMTRNWGQNWQSNDVLVGQSLSFSVKGSDGR 236
           YFNLVLITNV GAGDIVSV IKGSKTGWMSMTRNWGQNWQSN VLVGQSLSF VK SD R
Sbjct: 181 YFNLVLITNVGGAGDIVSVSIKGSKTGWMSMTRNWGQNWQSNTVLVGQSLSFRVKSSDNR 240

[Close]

BLAST of Carg04492-RA vs. TAIR 10
Match: AT2G28950.1 (expansin A6 )

HSP 1 Score: 380.6 bits (976), Expect = 9.4e-106
Identity = 173/227 (76.21%), Postives = 200/227 (88.11%), Query Frame = 0


Query: 9   LLSFLLIMSLAVECREHKGVYGGGPWQSAHATFYGGNDASGTMGGACGYGNLYSQGYGVN 68
           L+  +L   LA+      GVY GG W++AHATFYGG+DASGTMGGACGYGNLYSQGYGVN
Sbjct: 6   LVLSVLTTILALSEARIPGVYNGGGWETAHATFYGGSDASGTMGGACGYGNLYSQGYGVN 65

Query: 69  TAALSTALFNDGSSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPPNYALPNDNGGWCN 128
           TAALSTALFN+G SCGACFE+KC +DP+WCH+G+PSIF+TATNFCPPN+A P+DNGGWCN
Sbjct: 66  TAALSTALFNNGFSCGACFELKCASDPKWCHSGSPSIFITATNFCPPNFAQPSDNGGWCN 125

Query: 129 PPRPHFDLSMPMFLKIAQYRAGIVPVSFRRVGCRREGGIRFTMNGFKYFNLVLITNVAGA 188
           PPRPHFDL+MPMFLKIA+YRAGIVPVSFRRV CR+ GGIRFT+NGF+YFNLVL+TNVAGA
Sbjct: 126 PPRPHFDLAMPMFLKIAEYRAGIVPVSFRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGA 185

Query: 189 GDIVSVRIKGSKTGWMSMTRNWGQNWQSNDVLVGQSLSFSVKGSDGR 236
           G+IV + +KG+ T WM+M+RNWGQNWQSN VLVGQSLSF V  SD R
Sbjct: 186 GNIVRLGVKGTHTSWMTMSRNWGQNWQSNSVLVGQSLSFRVTSSDRR 232

[Close]

BLAST of Carg04492-RA vs. TAIR 10
Match: AT2G39700.1 (expansin A4 )

HSP 1 Score: 380.2 bits (975), Expect = 1.2e-105
Identity = 170/209 (81.34%), Postives = 190/209 (90.91%), Query Frame = 0


Query: 27  GVYGGGPWQSAHATFYGGNDASGTMGGACGYGNLYSQGYGVNTAALSTALFNDGSSCGAC 86
           G+Y GG WQ+AHATFYGG+DASGTMGGACGYGNLYSQGYG NTAALSTALFN+G SCGAC
Sbjct: 24  GIYSGGAWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGMSCGAC 83

Query: 87  FEIKCVNDPQWCHAGNPSIFVTATNFCPPNYALPNDNGGWCNPPRPHFDLSMPMFLKIAQ 146
           FE+KC NDPQWCH+G+PSI +TATNFCPPN A P+DNGGWCNPPR HFDL+MP+FLKIAQ
Sbjct: 84  FELKCANDPQWCHSGSPSILITATNFCPPNLAQPSDNGGWCNPPREHFDLAMPVFLKIAQ 143

Query: 147 YRAGIVPVSFRRVGCRREGGIRFTMNGFKYFNLVLITNVAGAGDIVSVRIKGSKTGWMSM 206
           YRAGIVPVS+RRV CR+ GGIRFT+NG +YFNLVLITNVAGAGDIV   +KGS+TGWMS+
Sbjct: 144 YRAGIVPVSYRRVPCRKRGGIRFTINGHRYFNLVLITNVAGAGDIVRASVKGSRTGWMSL 203

Query: 207 TRNWGQNWQSNDVLVGQSLSFSVKGSDGR 236
           +RNWGQNWQSN VLVGQ+LSF V GSD R
Sbjct: 204 SRNWGQNWQSNAVLVGQALSFRVTGSDRR 232

[Close]

BLAST of Carg04492-RA vs. TAIR 10
Match: AT3G55500.1 (expansin A16 )

HSP 1 Score: 379.4 bits (973), Expect = 2.1e-105
Identity = 177/235 (75.32%), Postives = 195/235 (82.98%), Query Frame = 0


Query: 1   MAATVSTALLSFLLIMSLAVECREHKGVYGGGPWQSAHATFYGGNDASGTMGGACGYGNL 60
           MA      L  F L + L+        V+ GG WQ+AHATFYGGNDASGTMGGACGYGNL
Sbjct: 1   MAINPLILLTIFPLFLLLSFTDAGIPRVFSGGSWQTAHATFYGGNDASGTMGGACGYGNL 60

Query: 61  YSQGYGVNTAALSTALFNDGSSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPPNYALP 120
           YSQGYG NTAALST+LFN G SCGACFEIKCVNDP+WCH GNPS+FVTATNFCPPN A P
Sbjct: 61  YSQGYGTNTAALSTSLFNSGQSCGACFEIKCVNDPKWCHPGNPSVFVTATNFCPPNLAQP 120

Query: 121 NDNGGWCNPPRPHFDLSMPMFLKIAQYRAGIVPVSFRRVGCRREGGIRFTMNGFKYFNLV 180
           +DNGGWCNPPR HFDL+MP+FLKIA+YRAGIVP+S+RRV CR+ GGIRFT+NG +YFNLV
Sbjct: 121 SDNGGWCNPPRSHFDLAMPVFLKIAEYRAGIVPISYRRVACRKSGGIRFTINGHRYFNLV 180

Query: 181 LITNVAGAGDIVSVRIKGSKTGWMSMTRNWGQNWQSNDVLVGQSLSFSVKGSDGR 236
           LITNVAGAGDI    +KGSKTGWMS+TRNWGQNWQSN VLVGQSLSF V  SD R
Sbjct: 181 LITNVAGAGDIARTSVKGSKTGWMSLTRNWGQNWQSNAVLVGQSLSFRVTSSDRR 235

[Close]

BLAST of Carg04492-RA vs. TAIR 10
Match: AT2G37640.1 (Barwin-like endoglucanases superfamily protein )

HSP 1 Score: 371.3 bits (952), Expect = 5.7e-103
Identity = 169/209 (80.86%), Postives = 187/209 (89.47%), Query Frame = 0


Query: 27  GVYGGGPWQSAHATFYGGNDASGTMGGACGYGNLYSQGYGVNTAALSTALFNDGSSCGAC 86
           GVY GGPWQ+AHATFYGG+DASGTMGGACGYGNLYSQGYGVNTAALSTALFN+G SCGAC
Sbjct: 29  GVYSGGPWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGFSCGAC 88

Query: 87  FEIKCVNDPQWCHAGNPSIFVTATNFCPPNYALPNDNGGWCNPPRPHFDLSMPMFLKIAQ 146
           FEIKC +DP+WC  GNPSI VTATNFCPPN+A P+D+GGWCNPPR HFDL+MPMFLKI  
Sbjct: 89  FEIKCTDDPRWCVPGNPSILVTATNFCPPNFAQPSDDGGWCNPPREHFDLAMPMFLKIGL 148

Query: 147 YRAGIVPVSFRRVGCRREGGIRFTMNGFKYFNLVLITNVAGAGDIVSVRIKGSKTGWMSM 206
           YRAGIVPVS+RRV CR+ GGIRFT+NGF+YFNLVL+TNVAGAGDI  V +KGSKT W+ M
Sbjct: 149 YRAGIVPVSYRRVPCRKIGGIRFTVNGFRYFNLVLVTNVAGAGDINGVSVKGSKTDWVRM 208

Query: 207 TRNWGQNWQSNDVLVGQSLSFSVKGSDGR 236
           +RNWGQNWQSN VL+GQSLSF V  SD R
Sbjct: 209 SRNWGQNWQSNAVLIGQSLSFRVTASDRR 237

[Close]

BLAST of Carg04492-RA vs. TAIR 10
Match: AT5G02260.1 (expansin A9 )

HSP 1 Score: 364.8 bits (935), Expect = 5.3e-101
Identity = 165/233 (70.82%), Postives = 197/233 (84.55%), Query Frame = 0


Query: 5   VSTALLSFLLIMSLAVECREHK--GVYGGGPWQSAHATFYGGNDASGTMGGACGYGNLYS 64
           ++  +++F+ +M +       K  GVY GGPW +AHATFYG  DASGTMGGACGYGNLYS
Sbjct: 1   MAAKVITFMAVMVVTAFTANAKIPGVYTGGPWINAHATFYGEADASGTMGGACGYGNLYS 60

Query: 65  QGYGVNTAALSTALFNDGSSCGACFEIKCVNDPQWCHAGNPSIFVTATNFCPPNYALPND 124
           QGYGVNTAALSTALFN+G SCG+CFE+KC+NDP WC  GNPSI +TATNFCPPN+   +D
Sbjct: 61  QGYGVNTAALSTALFNNGLSCGSCFELKCINDPGWCLPGNPSILITATNFCPPNFNQASD 120

Query: 125 NGGWCNPPRPHFDLSMPMFLKIAQYRAGIVPVSFRRVGCRREGGIRFTMNGFKYFNLVLI 184
           NGGWCNPPR HFDL+MPMFL IA+Y+AGIVPVS+RR+ CR++GGIRFT+NGFKYFNLVL+
Sbjct: 121 NGGWCNPPREHFDLAMPMFLSIAKYKAGIVPVSYRRIPCRKKGGIRFTINGFKYFNLVLV 180

Query: 185 TNVAGAGDIVSVRIKGSKTGWMSMTRNWGQNWQSNDVLVGQSLSFSVKGSDGR 236
           TNVAGAGD++ V +KGS T W+ ++RNWGQNWQSN +LVGQSLSF VK SDGR
Sbjct: 181 TNVAGAGDVIKVSVKGSNTQWLDLSRNWGQNWQSNALLVGQSLSFRVKTSDGR 233

The following BLAST results are available for this feature:

BLAST of Carg04492-RA vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7033061.1	2.8e-136	100.00	Expansin-A16, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022960594.1	1.4e-135	99.57	expansin-A4-like [Cucurbita moschata]	[more]
XP_023528847.1	2.6e-134	97.87	expansin-A4-like [Cucurbita pepo subsp. pepo]	[more]
XP_022990131.1	3.4e-134	97.87	expansin-A4-like [Cucurbita maxima]	[more]
XP_008458865.1	4.5e-118	87.08	PREDICTED: expansin-A4 [Cucumis melo] >QDL52551.1 expansin A9 [Cucumis melo]	[more]

BLAST of Carg04492-RA vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q852A1	3.5e-105	81.99	Expansin-A7 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPA7 PE=2 SV=1	[more]
Q38865	1.3e-104	76.21	Expansin-A6 OS=Arabidopsis thaliana OX=3702 GN=EXPA6 PE=2 SV=2	[more]
O48818	1.7e-104	81.34	Expansin-A4 OS=Arabidopsis thaliana OX=3702 GN=EXPA4 PE=1 SV=1	[more]
Q9M2S9	2.9e-104	75.32	Expansin-A16 OS=Arabidopsis thaliana OX=3702 GN=EXPA16 PE=2 SV=1	[more]
O80932	8.0e-102	80.86	Expansin-A3 OS=Arabidopsis thaliana OX=3702 GN=EXPA3 PE=2 SV=1	[more]

BLAST of Carg04492-RA vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HBG2	6.7e-136	99.57	Expansin OS=Cucurbita moschata OX=3662 GN=LOC111461326 PE=3 SV=1	[more]
A0A6J1JM34	1.7e-134	97.87	Expansin OS=Cucurbita maxima OX=3661 GN=LOC111487115 PE=3 SV=1	[more]
A0A1S3C8Z5	2.2e-118	87.08	Expansin OS=Cucumis melo OX=3656 GN=LOC103498141 PE=2 SV=1	[more]
A0A5D3DGP3	5.9e-116	90.50	Expansin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold311G00190 PE=3 ...	[more]
A0A0A0KNX4	5.9e-116	85.83	Expansin OS=Cucumis sativus OX=3659 GN=Csa_5G517210 PE=3 SV=1	[more]

BLAST of Carg04492-RA vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G28950.1	9.4e-106	76.21	expansin A6	[more]
AT2G39700.1	1.2e-105	81.34	expansin A4	[more]
AT3G55500.1	2.1e-105	75.32	expansin A16	[more]
AT2G37640.1	5.7e-103	80.86	Barwin-like endoglucanases superfamily protein	[more]
AT5G02260.1	5.3e-101	70.82	expansin A9	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002963	Expansin	PRINTS	PR01226	EXPANSIN	coord: 165..177 score: 75.64 coord: 212..233 score: 69.39 coord: 141..154 score: 80.0 coord: 124..141 score: 77.78 coord: 177..198 score: 73.64 coord: 91..102 score: 49.72 coord: 105..115 score: 85.15 coord: 64..78 score: 90.0
IPR007118	Expansin/Lol pI	PRINTS	PR01225	EXPANSNFAMLY	coord: 203..217 score: 66.67 coord: 51..69 score: 76.97 coord: 73..91 score: 70.92 coord: 149..165 score: 62.06 coord: 33..48 score: 65.94
IPR007112	Expansin/pollen allergen, DPBB domain	SMART	SM00837	dpbb_1	coord: 69..156 e-value: 6.1E-59 score: 211.8
IPR007112	Expansin/pollen allergen, DPBB domain	PROSITE	PS50842	EXPANSIN_EG45	coord: 52..166 score: 30.809883
IPR036908	RlpA-like domain superfamily	GENE3D	2.40.40.10		coord: 19..162 e-value: 8.6E-46 score: 157.5
IPR036908	RlpA-like domain superfamily	SUPERFAMILY	50685	Barwin-like endoglucanases	coord: 33..184
IPR009009	RlpA-like protein, double-psi beta-barrel domain	PFAM	PF03330	DPBB_1	coord: 69..156 e-value: 1.8E-22 score: 79.4
IPR036749	Expansin, cellulose-binding-like domain superfamily	GENE3D	2.60.40.760		coord: 166..235 e-value: 4.4E-14 score: 54.1
IPR036749	Expansin, cellulose-binding-like domain superfamily	SUPERFAMILY	49590	PHL pollen allergen	coord: 163..235
IPR007117	Expansin, cellulose-binding-like domain	PFAM	PF01357	Expansin_C	coord: 167..234 e-value: 1.6E-21 score: 76.1
IPR007117	Expansin, cellulose-binding-like domain	PROSITE	PS50843	EXPANSIN_CBD	coord: 176..235 score: 15.122128
None	No IPR available	PANTHER	PTHR31867	EXPANSIN-A15	coord: 10..235
None	No IPR available	PANTHER	PTHR31867:SF203	EXPANSIN-A6	coord: 10..235

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg04492	Carg04492	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg04492-RA:3	Carg04492-RA:3	exon
Carg04492-RA:2	Carg04492-RA:2	exon
Carg04492-RA:1	Carg04492-RA:1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg04492-RA:cds	Carg04492-RA:cds_3	CDS
Carg04492-RA:cds	Carg04492-RA:cds_2	CDS
Carg04492-RA:cds	Carg04492-RA:cds	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg04492-RA	Carg04492-RA-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009664	plant-type cell wall organization
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016020	membrane