Carg01813-RA (mRNA) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg01813-RA
Type	mRNA
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	transcription factor CYCLOIDEA-like
Location	Carg_Chr04: 9196784 .. 9198052 (+)
Sequence length	933
RNA-Seq Expression	Carg01813-RA
Synteny	Carg01813-RA

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTAGCTTCTTCAATTGACAATTCCATCCAAATCCATGATGAAAGATTCCAACAAACCATAGATTGCTACAATTTCAACCCTTTTCTTGATGATCATGACTTCATTTTTGGTCACATTTTGTACCCTGAAATTGGGCTTGGAAGTGCCAACAACACTAGTAATGATACCACAACCGCCCACAAAGCTTCATCCCAAGACAACCCCATTTCTAGGAAGAGATCAAGTGGGGCGAAGGACAGACATAGCAAGATCTGCACCTCAAAAGGGCCAAGAGATAGAAGAATGAGGCTTTCACTTGAAATTGCTAGACGTTTCTTTGATCTTCAAGACATGCTTGGGTTTGATAAAGCAAGCAAGACAGTGGAATGGCTGTTTACCAAATCAAGAAGTGCAATTAAGGAGCTCAGGGAGAAATTCTTATTAGAAGCAAATTCTTCTGAGTCTACTCTCGTAACAAATGTTTCGTTGTATCATGATCATGATCAGGAAGTACCTAGAGGGAAAAAGAGACGGAAATTAAGGATCGTTGATAAAGAATCGAGATTCAAAGCACGAGCTAGAGCGAGAGCGAGAACGAAGGCGAAGTTGATTCGAGCTCGTTTCGAGATATCAAAATCAAATTTTGAAGGAAACCCAGTTGGGGTTTGTAAGATGGAGGATGTTATTGAAGAAAGTAGCACCAAAAGCAAGAGTGTTGCTAATTTCCCTCAAAATTTGGGGTCCAAAGCCAAAAACTCAGCTTCTTTGATAAGTAATCATTGTTATGATAAAAGGGTTTCAAAGGAATCATGCTCTGAGATTCATCTTCTTCCTTGTTCTTCCATGGATATGGGCACCCTGTCCTTGGACACCATGAGAGCATCGCCTGCAGGTACTTTCCAAAATTAGGGTTTTGTTACGAACCCAACTCAAACATTTTTTATAAGAGTGTAGAAACCCGGGAAAAACCCTGAAAGAGAAAACCTAAGGAGGACAATATTTGTTAACGGGGCTCGGGCTTGGGGCTTAGGTTACAAGTTAAATGGTTTAGAATTCAAAATAACCCCATTCTTTCTAATTTTTGTCAAGATAAACCCTAATTGAGCATTATAAGATCAAGTTTACCATAGAATTTATATGTACTTTTGTTGAATATAAGTTATGGTCTTAATTAGTTTATTTTTAAGCAAAGATCCTTAAATTCCTCGAATGGAATTATAATTTGCAGGTTTGAAATTGTCGGAGCTGGATGAAGTTGATGGTGTACTGATCTTCTATGGAGAATGA

mRNA sequence

ATGCTAGCTTCTTCAATTGACAATTCCATCCAAATCCATGATGAAAGATTCCAACAAACCATAGATTGCTACAATTTCAACCCTTTTCTTGATGATCATGACTTCATTTTTGGTCACATTTTGTACCCTGAAATTGGGCTTGGAAGTGCCAACAACACTAGTAATGATACCACAACCGCCCACAAAGCTTCATCCCAAGACAACCCCATTTCTAGGAAGAGATCAAGTGGGGCGAAGGACAGACATAGCAAGATCTGCACCTCAAAAGGGCCAAGAGATAGAAGAATGAGGCTTTCACTTGAAATTGCTAGACGTTTCTTTGATCTTCAAGACATGCTTGGGTTTGATAAAGCAAGCAAGACAGTGGAATGGCTGTTTACCAAATCAAGAAGTGCAATTAAGGAGCTCAGGGAGAAATTCTTATTAGAAGCAAATTCTTCTGAGTCTACTCTCGTAACAAATGTTTCGTTGTATCATGATCATGATCAGGAAGTACCTAGAGGGAAAAAGAGACGGAAATTAAGGATCGTTGATAAAGAATCGAGATTCAAAGCACGAGCTAGAGCGAGAGCGAGAACGAAGGCGAAGTTGATTCGAGCTCGTTTCGAGATATCAAAATCAAATTTTGAAGGAAACCCAGTTGGGGTTTGTAAGATGGAGGATGTTATTGAAGAAAGTAGCACCAAAAGCAAGAGTGTTGCTAATTTCCCTCAAAATTTGGGGTCCAAAGCCAAAAACTCAGCTTCTTTGATAAGTAATCATTGTTATGATAAAAGGGTTTCAAAGGAATCATGCTCTGAGATTCATCTTCTTCCTTGTTCTTCCATGGATATGGGCACCCTGTCCTTGGACACCATGAGAGCATCGCCTGCAGGTTTGAAATTGTCGGAGCTGGATGAAGTTGATGGTGTACTGATCTTCTATGGAGAATGA

Coding sequence (CDS)

ATGCTAGCTTCTTCAATTGACAATTCCATCCAAATCCATGATGAAAGATTCCAACAAACCATAGATTGCTACAATTTCAACCCTTTTCTTGATGATCATGACTTCATTTTTGGTCACATTTTGTACCCTGAAATTGGGCTTGGAAGTGCCAACAACACTAGTAATGATACCACAACCGCCCACAAAGCTTCATCCCAAGACAACCCCATTTCTAGGAAGAGATCAAGTGGGGCGAAGGACAGACATAGCAAGATCTGCACCTCAAAAGGGCCAAGAGATAGAAGAATGAGGCTTTCACTTGAAATTGCTAGACGTTTCTTTGATCTTCAAGACATGCTTGGGTTTGATAAAGCAAGCAAGACAGTGGAATGGCTGTTTACCAAATCAAGAAGTGCAATTAAGGAGCTCAGGGAGAAATTCTTATTAGAAGCAAATTCTTCTGAGTCTACTCTCGTAACAAATGTTTCGTTGTATCATGATCATGATCAGGAAGTACCTAGAGGGAAAAAGAGACGGAAATTAAGGATCGTTGATAAAGAATCGAGATTCAAAGCACGAGCTAGAGCGAGAGCGAGAACGAAGGCGAAGTTGATTCGAGCTCGTTTCGAGATATCAAAATCAAATTTTGAAGGAAACCCAGTTGGGGTTTGTAAGATGGAGGATGTTATTGAAGAAAGTAGCACCAAAAGCAAGAGTGTTGCTAATTTCCCTCAAAATTTGGGGTCCAAAGCCAAAAACTCAGCTTCTTTGATAAGTAATCATTGTTATGATAAAAGGGTTTCAAAGGAATCATGCTCTGAGATTCATCTTCTTCCTTGTTCTTCCATGGATATGGGCACCCTGTCCTTGGACACCATGAGAGCATCGCCTGCAGGTTTGAAATTGTCGGAGCTGGATGAAGTTGATGGTGTACTGATCTTCTATGGAGAATGA

Protein sequence

MLASSIDNSIQIHDERFQQTIDCYNFNPFLDDHDFIFGHILYPEIGLGSANNTSNDTTTAHKASSQDNPISRKRSSGAKDRHSKICTSKGPRDRRMRLSLEIARRFFDLQDMLGFDKASKTVEWLFTKSRSAIKELREKFLLEANSSESTLVTNVSLYHDHDQEVPRGKKRRKLRIVDKESRFKARARARARTKAKLIRARFEISKSNFEGNPVGVCKMEDVIEESSTKSKSVANFPQNLGSKAKNSASLISNHCYDKRVSKESCSEIHLLPCSSMDMGTLSLDTMRASPAGLKLSELDEVDGVLIFYGE

Homology

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BLAST of Carg01813-RA vs. NCBI nr
Match: KAG7032105.1 (Transcription factor TCP12, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 597.4 bits (1539), Expect = 6.9e-167
Identity = 310/310 (100.00%), Postives = 310/310 (100.00%), Query Frame = 0


Query: 1   MLASSIDNSIQIHDERFQQTIDCYNFNPFLDDHDFIFGHILYPEIGLGSANNTSNDTTTA 60
           MLASSIDNSIQIHDERFQQTIDCYNFNPFLDDHDFIFGHILYPEIGLGSANNTSNDTTTA
Sbjct: 1   MLASSIDNSIQIHDERFQQTIDCYNFNPFLDDHDFIFGHILYPEIGLGSANNTSNDTTTA 60

Query: 61  HKASSQDNPISRKRSSGAKDRHSKICTSKGPRDRRMRLSLEIARRFFDLQDMLGFDKASK 120
           HKASSQDNPISRKRSSGAKDRHSKICTSKGPRDRRMRLSLEIARRFFDLQDMLGFDKASK
Sbjct: 61  HKASSQDNPISRKRSSGAKDRHSKICTSKGPRDRRMRLSLEIARRFFDLQDMLGFDKASK 120

Query: 121 TVEWLFTKSRSAIKELREKFLLEANSSESTLVTNVSLYHDHDQEVPRGKKRRKLRIVDKE 180
           TVEWLFTKSRSAIKELREKFLLEANSSESTLVTNVSLYHDHDQEVPRGKKRRKLRIVDKE
Sbjct: 121 TVEWLFTKSRSAIKELREKFLLEANSSESTLVTNVSLYHDHDQEVPRGKKRRKLRIVDKE 180

Query: 181 SRFKARARARARTKAKLIRARFEISKSNFEGNPVGVCKMEDVIEESSTKSKSVANFPQNL 240
           SRFKARARARARTKAKLIRARFEISKSNFEGNPVGVCKMEDVIEESSTKSKSVANFPQNL
Sbjct: 181 SRFKARARARARTKAKLIRARFEISKSNFEGNPVGVCKMEDVIEESSTKSKSVANFPQNL 240

Query: 241 GSKAKNSASLISNHCYDKRVSKESCSEIHLLPCSSMDMGTLSLDTMRASPAGLKLSELDE 300
           GSKAKNSASLISNHCYDKRVSKESCSEIHLLPCSSMDMGTLSLDTMRASPAGLKLSELDE
Sbjct: 241 GSKAKNSASLISNHCYDKRVSKESCSEIHLLPCSSMDMGTLSLDTMRASPAGLKLSELDE 300

Query: 301 VDGVLIFYGE 311
           VDGVLIFYGE
Sbjct: 301 VDGVLIFYGE 310

[Close]

BLAST of Carg01813-RA vs. NCBI nr
Match: XP_022957318.1 (transcription factor CYCLOIDEA-like [Cucurbita moschata])

HSP 1 Score: 592.4 bits (1526), Expect = 2.2e-165
Identity = 310/312 (99.36%), Postives = 310/312 (99.36%), Query Frame = 0


Query: 1   MLASSIDNSIQIHDERFQQTIDCYNFNPFLDDHDFIFGHILYPEIGLGSANNTSNDTTTA 60
           MLASSIDNSIQIHDERFQQTIDCYNFNPFLDDHDFIFGHILYPEIGLGSANNTSNDTTTA
Sbjct: 1   MLASSIDNSIQIHDERFQQTIDCYNFNPFLDDHDFIFGHILYPEIGLGSANNTSNDTTTA 60

Query: 61  HKASSQDNPISRKRSSGAKDRHSKICTSKGPRDRRMRLSLEIARRFFDLQDMLGFDKASK 120
           HKASSQDNPISRKRSSGAKDRHSKICTSKGPRDRRMRLSLEIARRFFDLQDMLGFDKASK
Sbjct: 61  HKASSQDNPISRKRSSGAKDRHSKICTSKGPRDRRMRLSLEIARRFFDLQDMLGFDKASK 120

Query: 121 TVEWLFTKSRSAIKELREKFLLEANSSESTLVTNVSLY--HDHDQEVPRGKKRRKLRIVD 180
           TVEWLFTKSRSAIKELREKFLLEANSSESTLVTNVSLY  HDHDQEVPRGKKRRKLRIVD
Sbjct: 121 TVEWLFTKSRSAIKELREKFLLEANSSESTLVTNVSLYHDHDHDQEVPRGKKRRKLRIVD 180

Query: 181 KESRFKARARARARTKAKLIRARFEISKSNFEGNPVGVCKMEDVIEESSTKSKSVANFPQ 240
           KESRFKARARARARTKAKLIRARFEISKSNFEGNPVGVCKMEDVIEESSTKSKSVANFPQ
Sbjct: 181 KESRFKARARARARTKAKLIRARFEISKSNFEGNPVGVCKMEDVIEESSTKSKSVANFPQ 240

Query: 241 NLGSKAKNSASLISNHCYDKRVSKESCSEIHLLPCSSMDMGTLSLDTMRASPAGLKLSEL 300
           NLGSKAKNSASLISNHCYDKRVSKESCSEIHLLPCSSMDMGTLSLDTMRASPAGLKLSEL
Sbjct: 241 NLGSKAKNSASLISNHCYDKRVSKESCSEIHLLPCSSMDMGTLSLDTMRASPAGLKLSEL 300

Query: 301 DEVDGVLIFYGE 311
           DEVDGVLIFYGE
Sbjct: 301 DEVDGVLIFYGE 312

[Close]

BLAST of Carg01813-RA vs. NCBI nr
Match: XP_023515134.1 (transcription factor CYCLOIDEA-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 569.7 bits (1467), Expect = 1.5e-158
Identity = 303/311 (97.43%), Postives = 304/311 (97.75%), Query Frame = 0


Query: 1   MLASSIDNSIQIHDERFQQTIDCYNFNPFLDDHDFIFGHILYPEIGLGSANNTSNDTTTA 60
           MLASSIDNSIQIHDERFQQTIDCYNFNPFLDDHDFIFGHILYPEIGLGSANNTSNDTTTA
Sbjct: 1   MLASSIDNSIQIHDERFQQTIDCYNFNPFLDDHDFIFGHILYPEIGLGSANNTSNDTTTA 60

Query: 61  HKASSQDNPISRKRSSGAKDRHSKICTSKGPRDRRMRLSLEIARRFFDLQDMLGFDKASK 120
           HKASSQDNPISRKRSSGAKDRHSKICTSKGPRDRRMRLSLEIARRFFDLQDMLGFDKASK
Sbjct: 61  HKASSQDNPISRKRSSGAKDRHSKICTSKGPRDRRMRLSLEIARRFFDLQDMLGFDKASK 120

Query: 121 TVEWLFTKSRSAIKELREKFLLEANSSESTLVTNVSLYHDHDQEVPRGKKRRKLRIVDKE 180
           TVEWLFTKSRSAIKEL+EKFLLEANSSESTLV NVSLY   DQEVPRGKKRRKLRIVDKE
Sbjct: 121 TVEWLFTKSRSAIKELKEKFLLEANSSESTLVRNVSLY--RDQEVPRGKKRRKLRIVDKE 180

Query: 181 SRFKARARARARTKAKLIRARFEISKSNFEGNPVGVCKMEDVIEESSTKSKSVANFPQNL 240
           SRFKARARARARTKAKLIR RFEISKSNFEGNPVGVCKMEDVIEESSTKSKSVANFPQNL
Sbjct: 181 SRFKARARARARTKAKLIRGRFEISKSNFEGNPVGVCKMEDVIEESSTKSKSVANFPQNL 240

Query: 241 GSKAKNSASLISNHCYDKRVSKESCS-EIHLLPCSSMDMGTLSLDTMRASPAGLKLSELD 300
           GSKAKNSASLISNHCYDKRVSKESCS EIHLLP SSMDMGTLSLDTMRASPAGLKLSELD
Sbjct: 241 GSKAKNSASLISNHCYDKRVSKESCSEEIHLLPGSSMDMGTLSLDTMRASPAGLKLSELD 300

Query: 301 EVDGVLIFYGE 311
           EVDGVLIFYGE
Sbjct: 301 EVDGVLIFYGE 309

[Close]

BLAST of Carg01813-RA vs. NCBI nr
Match: XP_022984046.1 (transcription factor CYCLOIDEA-like [Cucurbita maxima])

HSP 1 Score: 546.2 bits (1406), Expect = 1.8e-151
Identity = 294/313 (93.93%), Postives = 299/313 (95.53%), Query Frame = 0


Query: 1   MLASSIDNSIQIHDERFQQTIDCYNFNPFLDDHDFIFGHILYPEIGLGSANNTSNDTTTA 60
           MLASSIDNSIQIHDERFQQTIDCYNFNPFLDD DFIFGHILYPEIGLGSANNT+NDTTTA
Sbjct: 1   MLASSIDNSIQIHDERFQQTIDCYNFNPFLDDQDFIFGHILYPEIGLGSANNTNNDTTTA 60

Query: 61  HKASSQDNPISRKRSSGAKDRHSKICTSKGPRDRRMRLSLEIARRFFDLQDMLGFDKASK 120
           HKASSQDNPISRKRSSGAKDRHSKICTSKGPRDRRMRLSLEIARRFFDLQDMLGFDKASK
Sbjct: 61  HKASSQDNPISRKRSSGAKDRHSKICTSKGPRDRRMRLSLEIARRFFDLQDMLGFDKASK 120

Query: 121 TVEWLFTKSRSAIKELREKFLLEANSSESTLVTNVSLYHDHDQEVPRGKKRRKLRIVDKE 180
           TVEWLFTKSRSAIKEL+EKFLL+ +SS STLV NVSLY   DQEVPRGKKRRKLRIVDKE
Sbjct: 121 TVEWLFTKSRSAIKELKEKFLLKVHSSGSTLVRNVSLY--RDQEVPRGKKRRKLRIVDKE 180

Query: 181 SRFKARARARARTKAKLIRARFEISKSNFEGNPVGVCKMEDVIEESSTKSKSVANFPQNL 240
           SRFKARARAR RT+AKLIR RFEISKSNFE NPVGVCKMEDVIEESSTKSKSVANFPQNL
Sbjct: 181 SRFKARARARERTRAKLIRGRFEISKSNFEVNPVGVCKMEDVIEESSTKSKSVANFPQNL 240

Query: 241 GSKAKNSASLISNHCYDKRVSKESCS-EIHLLP--CSSMDMGTLSLDTMRASPAGLKLSE 300
           GSKAKNSASLISNHCYDKRVSKESCS EIHLLP   SSMDMGTLSLDTMRASPAGLKLSE
Sbjct: 241 GSKAKNSASLISNHCYDKRVSKESCSGEIHLLPGSGSSMDMGTLSLDTMRASPAGLKLSE 300

Query: 301 LDEVDGVLIFYGE 311
           LDEVDGVLIFYGE
Sbjct: 301 LDEVDGVLIFYGE 311

[Close]

BLAST of Carg01813-RA vs. NCBI nr
Match: XP_038893072.1 (transcription factor TCP18-like [Benincasa hispida])

HSP 1 Score: 376.7 bits (966), Expect = 1.9e-100
Identity = 239/369 (64.77%), Postives = 266/369 (72.09%), Query Frame = 0


Query: 3   ASSIDNSIQIHDER-------FQ--------QTIDC------YNFNPFLDDH-DFIFGHI 62
           ++SI+ SIQIHD+        F+        Q IDC      YNFNPFLDDH +FI GHI
Sbjct: 19  STSIEKSIQIHDQNQNPMSRLFEQQNHPPSLQLIDCYNYNYNYNFNPFLDDHQEFILGHI 78

Query: 63  LY---------------PEIGL-GSANNTSNDTTTAHKASSQDNP-----------ISRK 122
           LY               PEIGL  S NNT+N+ TT  + SSQ+             ISRK
Sbjct: 79  LYSQKHQLLGNNSNSFDPEIGLIESTNNTNNEATTTSQNSSQNKAKTDHTSPKKPIISRK 138

Query: 123 RSSGA---KDRHSKICTSKGPRDRRMRLSLEIARRFFDLQDMLGFDKASKTVEWLFTKSR 182
           RSS     KDRHSKICTSKGPRDRRMRLSLEIAR FFDLQDMLGFDKASKTVEWLFTKSR
Sbjct: 139 RSSSGMKKKDRHSKICTSKGPRDRRMRLSLEIARNFFDLQDMLGFDKASKTVEWLFTKSR 198

Query: 183 SAIKELREKFLLEAN---SSESTLVTNVSLYHDHDQEVPRGKKRRKLRIVDKESRFKARA 242
           +AIKEL+EK+L EAN   S +STLVT +S+Y  +D+ VPRGKKRR+LRIVDKESR+KARA
Sbjct: 199 NAIKELKEKYLSEANRKSSCDSTLVTKLSVY--NDKAVPRGKKRRRLRIVDKESRYKARA 258

Query: 243 RARARTKAKLIRARFEISKSNFEGNPVGVCKMEDVIEE-SSTKSK----SVANFPQNLGS 302
           RAR RT+AK IR   EISK++FEGNP GVCKM DVIEE SSTK K    S+    + L S
Sbjct: 259 RARERTRAKSIRCGLEISKTDFEGNPDGVCKMGDVIEEISSTKRKMKHVSICENEKILRS 318

Query: 303 KAKNSASLISNHCYDKRVSKESCS-EIHLLPCSSMDMGTLSLDTMRASPAGLKLSELDEV 311
           K KNSASLISN C DKRVSKE CS EIHLLP SSMDM TLSLDTM+ASPAGLKL ELDE+
Sbjct: 319 KGKNSASLISNQCEDKRVSKEICSDEIHLLPDSSMDMATLSLDTMKASPAGLKLLELDEI 378

[Close]

BLAST of Carg01813-RA vs. ExPASy Swiss-Prot
Match: A0AQW4 (Transcription factor TCP12 OS=Arabidopsis thaliana OX=3702 GN=TCP12 PE=2 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 2.1e-25
Identity = 70/146 (47.95%), Postives = 95/146 (65.07%), Query Frame = 0


Query: 65  SQDNPISRKRSSGAKDRHSKICTSKGPRDRRMRLSLEIARRFFDLQDMLGFDKASKTVEW 124
           S    +  +R+   +DRHSKICT++GPRDRRMRLSL+IAR+FFDLQDMLGFDKASKT+EW
Sbjct: 99  STSQEVQWRRTVKKRDRHSKICTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEW 158

Query: 125 LFTKSRSAIKELREKFLLEANSSESTLVTNVSLYHDHDQEVPRGKKRRKL---RIVDKES 184
           LF+KS+++IK+L+E+        +   +       D   ++   K+R K        KES
Sbjct: 159 LFSKSKTSIKQLKERVAASEGGGKDEHLQVDEKEKDETLKLRVSKRRTKTMESSFKTKES 218

Query: 185 RFKARARARARTKAKLIRARFEISKS 208
           R +AR RAR RT AK+    FE S++
Sbjct: 219 RERARKRARERTMAKMKMRLFETSET 244

[Close]

BLAST of Carg01813-RA vs. ExPASy Swiss-Prot
Match: Q9SBV6 (Transcription factor CYCLOIDEA (Fragment) OS=Antirrhinum linkianum OX=102601 GN=CYC PE=3 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 6.3e-22
Identity = 77/184 (41.85%), Postives = 102/184 (55.43%), Query Frame = 0


Query: 33  HDFIFGHIL-------YPEIGLGSANNTSNDTTTAHKASSQDNPISRKRSSGAKDRHSKI 92
           HD + GH L            L + NN  N     +  +   +P    + +  KDRHSKI
Sbjct: 28  HDMLSGHYLTTANAPVLESTALFNNNNNFNH-DVVNGLNRDPSPTFPTKQAVKKDRHSKI 87

Query: 93  CTSKGPRDRRMRLSLEIARRFFDLQDMLGFDKASKTVEWLFTKSRSAIKELREKFLLEAN 152
            TS+GPRDRR+RLS+ IAR+FFDLQ+MLGFDK SKT++WL TKS++AIKEL +    ++N
Sbjct: 88  YTSQGPRDRRVRLSIGIARKFFDLQEMLGFDKPSKTLDWLLTKSKTAIKELVQSKSTKSN 147

Query: 153 SS------ESTLVTNVSLYHDHDQEVPRGKKRRKLRIVD------KESRFKARARARART 198
           SS      E  +  +     DH +        +    +D      KESR KARARAR RT
Sbjct: 148 SSSPCDDCEEVVSVDSENVTDHSKGKSLKANNKCKEAMDSHQAAAKESRAKARARARERT 207

[Close]

BLAST of Carg01813-RA vs. ExPASy Swiss-Prot
Match: O49250 (Transcription factor CYCLOIDEA OS=Antirrhinum majus OX=4151 GN=CYC PE=1 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 6.3e-22
Identity = 77/184 (41.85%), Postives = 102/184 (55.43%), Query Frame = 0


Query: 33  HDFIFGHIL-------YPEIGLGSANNTSNDTTTAHKASSQDNPISRKRSSGAKDRHSKI 92
           HD + GH L            L + NN  N     +  +   +P    + +  KDRHSKI
Sbjct: 36  HDMLSGHYLTTANAPVLESTALFNNNNNFNH-DVVNGLNRDPSPTFPTKQAVKKDRHSKI 95

Query: 93  CTSKGPRDRRMRLSLEIARRFFDLQDMLGFDKASKTVEWLFTKSRSAIKELREKFLLEAN 152
            TS+GPRDRR+RLS+ IAR+FFDLQ+MLGFDK SKT++WL TKS++AIKEL +    ++N
Sbjct: 96  YTSQGPRDRRVRLSIGIARKFFDLQEMLGFDKPSKTLDWLLTKSKTAIKELVQSKSTKSN 155

Query: 153 SS------ESTLVTNVSLYHDHDQEVPRGKKRRKLRIVD------KESRFKARARARART 198
           SS      E  +  +     DH +        +    +D      KESR KARARAR RT
Sbjct: 156 SSSPCDDCEEVVSVDSENVTDHSKGKSLKANNKCKEAMDSHQAAAKESRAKARARARERT 215

[Close]

BLAST of Carg01813-RA vs. ExPASy Swiss-Prot
Match: Q9SBV9 (Transcription factor CYCLOIDEA (Fragment) OS=Antirrhinum cirrhigerum OX=102600 GN=CYC PE=3 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.4e-21
Identity = 78/188 (41.49%), Postives = 105/188 (55.85%), Query Frame = 0


Query: 33  HDFIFGHIL-------YPEIGLGSANNTSNDTTTAHKASSQDNPISRKRSSGAKDRHSKI 92
           HD + GH L            L + NN  N     +  +   +P    + +  KDRHSKI
Sbjct: 28  HDMLSGHYLTTANAPVLESTALFNNNNNFNH-DVVNGLNRDPSPTFPTKQAVKKDRHSKI 87

Query: 93  CTSKGPRDRRMRLSLEIARRFFDLQDMLGFDKASKTVEWLFTKSRSAIKELREKFLLEAN 152
            TS+GPRDRR+RLS+ IAR+FFDLQ+MLGFDK SKT++WL TKS++A+KEL +    ++N
Sbjct: 88  YTSQGPRDRRVRLSIGIARKFFDLQEMLGFDKPSKTLDWLLTKSKTAVKELVQSKSTKSN 147

Query: 153 SS------------ESTLVTNVSLYHDHDQEVPRGKKRRKL----RIVDKESRFKARARA 198
           SS            ES  VT+    H   + +    K ++     +   KESR KARARA
Sbjct: 148 SSSPCDDCEEVVSVESENVTD----HSKGKSLKANNKCKEAMDSHQAAAKESRAKARARA 207

[Close]

BLAST of Carg01813-RA vs. ExPASy Swiss-Prot
Match: Q9SNW8 (Transcription factor DICHOTOMA OS=Antirrhinum majus OX=4151 GN=DICH PE=2 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 2.0e-20
Identity = 73/163 (44.79%), Postives = 98/163 (60.12%), Query Frame = 0


Query: 73  KRSSGAKDRHSKICTSKGPRDRRMRLSLEIARRFFDLQDMLGFDKASKTVEWLFTKSRSA 132
           K+ +  KDRHSKI   +GPRDRR+RLS+ IAR+FFDLQ+MLGFDK SKT++WL TKS+ A
Sbjct: 82  KKHTPKKDRHSKINRPQGPRDRRVRLSIGIARKFFDLQEMLGFDKPSKTLDWLLTKSKEA 141

Query: 133 IKELREKFLLEANSSESTLVTNVSLYHDHDQEVPR------GKKRRKLRI---------- 192
           IKE     L+++ SS+S +  + S   + DQEV        G  + K  +          
Sbjct: 142 IKE-----LVQSKSSKSNISNSPS---ECDQEVLSADLPYIGSSKGKAAVGLNSNKCKGG 201

Query: 193 -----VDKESRFKARARARARTKAKL-IRARFEISKSNFEGNP 214
                + KESR KARARAR RTK K+ I+   +    ++E NP
Sbjct: 202 RDAVDLAKESRAKARARARERTKEKMCIKQLNQERNKSYEWNP 236

[Close]

BLAST of Carg01813-RA vs. ExPASy TrEMBL
Match: A0A6J1GZV4 (transcription factor CYCLOIDEA-like OS=Cucurbita moschata OX=3662 GN=LOC111458752 PE=4 SV=1)

HSP 1 Score: 592.4 bits (1526), Expect = 1.1e-165
Identity = 310/312 (99.36%), Postives = 310/312 (99.36%), Query Frame = 0


Query: 1   MLASSIDNSIQIHDERFQQTIDCYNFNPFLDDHDFIFGHILYPEIGLGSANNTSNDTTTA 60
           MLASSIDNSIQIHDERFQQTIDCYNFNPFLDDHDFIFGHILYPEIGLGSANNTSNDTTTA
Sbjct: 1   MLASSIDNSIQIHDERFQQTIDCYNFNPFLDDHDFIFGHILYPEIGLGSANNTSNDTTTA 60

Query: 61  HKASSQDNPISRKRSSGAKDRHSKICTSKGPRDRRMRLSLEIARRFFDLQDMLGFDKASK 120
           HKASSQDNPISRKRSSGAKDRHSKICTSKGPRDRRMRLSLEIARRFFDLQDMLGFDKASK
Sbjct: 61  HKASSQDNPISRKRSSGAKDRHSKICTSKGPRDRRMRLSLEIARRFFDLQDMLGFDKASK 120

Query: 121 TVEWLFTKSRSAIKELREKFLLEANSSESTLVTNVSLY--HDHDQEVPRGKKRRKLRIVD 180
           TVEWLFTKSRSAIKELREKFLLEANSSESTLVTNVSLY  HDHDQEVPRGKKRRKLRIVD
Sbjct: 121 TVEWLFTKSRSAIKELREKFLLEANSSESTLVTNVSLYHDHDHDQEVPRGKKRRKLRIVD 180

Query: 181 KESRFKARARARARTKAKLIRARFEISKSNFEGNPVGVCKMEDVIEESSTKSKSVANFPQ 240
           KESRFKARARARARTKAKLIRARFEISKSNFEGNPVGVCKMEDVIEESSTKSKSVANFPQ
Sbjct: 181 KESRFKARARARARTKAKLIRARFEISKSNFEGNPVGVCKMEDVIEESSTKSKSVANFPQ 240

Query: 241 NLGSKAKNSASLISNHCYDKRVSKESCSEIHLLPCSSMDMGTLSLDTMRASPAGLKLSEL 300
           NLGSKAKNSASLISNHCYDKRVSKESCSEIHLLPCSSMDMGTLSLDTMRASPAGLKLSEL
Sbjct: 241 NLGSKAKNSASLISNHCYDKRVSKESCSEIHLLPCSSMDMGTLSLDTMRASPAGLKLSEL 300

Query: 301 DEVDGVLIFYGE 311
           DEVDGVLIFYGE
Sbjct: 301 DEVDGVLIFYGE 312

[Close]

BLAST of Carg01813-RA vs. ExPASy TrEMBL
Match: A0A6J1J441 (transcription factor CYCLOIDEA-like OS=Cucurbita maxima OX=3661 GN=LOC111482452 PE=4 SV=1)

HSP 1 Score: 546.2 bits (1406), Expect = 8.8e-152
Identity = 294/313 (93.93%), Postives = 299/313 (95.53%), Query Frame = 0


Query: 1   MLASSIDNSIQIHDERFQQTIDCYNFNPFLDDHDFIFGHILYPEIGLGSANNTSNDTTTA 60
           MLASSIDNSIQIHDERFQQTIDCYNFNPFLDD DFIFGHILYPEIGLGSANNT+NDTTTA
Sbjct: 1   MLASSIDNSIQIHDERFQQTIDCYNFNPFLDDQDFIFGHILYPEIGLGSANNTNNDTTTA 60

Query: 61  HKASSQDNPISRKRSSGAKDRHSKICTSKGPRDRRMRLSLEIARRFFDLQDMLGFDKASK 120
           HKASSQDNPISRKRSSGAKDRHSKICTSKGPRDRRMRLSLEIARRFFDLQDMLGFDKASK
Sbjct: 61  HKASSQDNPISRKRSSGAKDRHSKICTSKGPRDRRMRLSLEIARRFFDLQDMLGFDKASK 120

Query: 121 TVEWLFTKSRSAIKELREKFLLEANSSESTLVTNVSLYHDHDQEVPRGKKRRKLRIVDKE 180
           TVEWLFTKSRSAIKEL+EKFLL+ +SS STLV NVSLY   DQEVPRGKKRRKLRIVDKE
Sbjct: 121 TVEWLFTKSRSAIKELKEKFLLKVHSSGSTLVRNVSLY--RDQEVPRGKKRRKLRIVDKE 180

Query: 181 SRFKARARARARTKAKLIRARFEISKSNFEGNPVGVCKMEDVIEESSTKSKSVANFPQNL 240
           SRFKARARAR RT+AKLIR RFEISKSNFE NPVGVCKMEDVIEESSTKSKSVANFPQNL
Sbjct: 181 SRFKARARARERTRAKLIRGRFEISKSNFEVNPVGVCKMEDVIEESSTKSKSVANFPQNL 240

Query: 241 GSKAKNSASLISNHCYDKRVSKESCS-EIHLLP--CSSMDMGTLSLDTMRASPAGLKLSE 300
           GSKAKNSASLISNHCYDKRVSKESCS EIHLLP   SSMDMGTLSLDTMRASPAGLKLSE
Sbjct: 241 GSKAKNSASLISNHCYDKRVSKESCSGEIHLLPGSGSSMDMGTLSLDTMRASPAGLKLSE 300

Query: 301 LDEVDGVLIFYGE 311
           LDEVDGVLIFYGE
Sbjct: 301 LDEVDGVLIFYGE 311

[Close]

BLAST of Carg01813-RA vs. ExPASy TrEMBL
Match: A0A0A0KT45 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G608320 PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 1.5e-82
Identity = 218/372 (58.60%), Postives = 245/372 (65.86%), Query Frame = 0


Query: 4   SSIDNS-IQIHDERFQ-------------------QTIDCYN-------FNPFLDDH-DF 63
           +SI+ S IQIHDE                      Q IDC N       FNPFLDDH +F
Sbjct: 21  TSIEKSIIQIHDENHDDGQNPMSRLFEQQIHPPSLQLIDCSNYNYNNNYFNPFLDDHQEF 80

Query: 64  IFGHILY-----------PEIG-LGSANNTSND----TTTAHKASSQDN----------P 123
           I GHILY            +IG + S+NNT+N+    TTT H  SSQ+           P
Sbjct: 81  ILGHILYSQKHQLLANNSDQIGVIESSNNTNNNEAAATTTTHNYSSQNKAKTDHSSQKIP 140

Query: 124 ISRKRSSGA---KDRHSKICTSKGPRDRRMRLSLEIARRFFDLQDMLGFDKASKTVEWLF 183
           ISRKRSS     KDRHSKICTSKGPRDRRMRLSLEIAR FFDLQDMLGFDKASKTVEWLF
Sbjct: 141 ISRKRSSSVMKKKDRHSKICTSKGPRDRRMRLSLEIARNFFDLQDMLGFDKASKTVEWLF 200

Query: 184 TKSRSAIKELREKFLLEANSSESTLVTNVSLYHDHDQEVPRGKK-RRKLRIVDKESRFKA 243
           TKSRSAIKE++EK+L EA S  S   +   + + + + +P GKK RR+LRIVDKESR+KA
Sbjct: 201 TKSRSAIKEVKEKYLSEAKSKSSCYSSTDLVTNLYKEVLPSGKKRRRRLRIVDKESRYKA 260

Query: 244 RARARARTKAKLIRARFEISKSNFEGNPVGVCKMEDVIEE-SSTKSK-----SVANFPQN 303
           RARAR RT+AK I+   E+SKSN EGNP GV KM D  EE S  K K     S+    + 
Sbjct: 261 RARARERTRAKSIQRGLEVSKSNLEGNPDGVRKMGDFSEEISGNKRKTSTHVSLCENEKV 320

Query: 304 LGSKAKNSASLISNHCYDKRVSKESCS-EIHLLPCSSMDMGTLSLDTMRASPAGLKLSEL 311
           LGS+ KNS SLI     DKRVSKE CS EIHLLP SSMDM TLSLDTM+AS AGLKL EL
Sbjct: 321 LGSEEKNSDSLI----MDKRVSKEICSDEIHLLPDSSMDMPTLSLDTMKASSAGLKLLEL 380

[Close]

BLAST of Carg01813-RA vs. ExPASy TrEMBL
Match: A0A6J1G0U4 (transcription factor TCP12-like OS=Cucurbita moschata OX=3662 GN=LOC111449645 PE=4 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 4.9e-78
Identity = 199/334 (59.58%), Postives = 225/334 (67.37%), Query Frame = 0


Query: 1   MLASSIDNSIQIHDERFQ-----QTIDCYNFNPFLDDHDFIFGHILY------------- 60
           MLAS   N+ QIHDE        Q ID YNF+PFLD+ DFI   ILY             
Sbjct: 1   MLAS---NTNQIHDEHESHQLSLQFIDYYNFDPFLDE-DFILSQILYTQKQQFLDANNFE 60

Query: 61  PEIGLG-SANNTSNDTTTAHKASSQDNPISRKRSSGAKDRHSKICTSKGPRDRRMRLSLE 120
           PEIG   S NNT+ + T   KA  Q  PISRKRSS  KDRHSKICTSKGPRDRRMRLS+E
Sbjct: 61  PEIGFEISVNNTNEEIT--QKALPQKKPISRKRSSN-KDRHSKICTSKGPRDRRMRLSIE 120

Query: 121 IARRFFDLQDMLGFDKASKTVEWLFTKSRSAIKELREKFLLEANSSE-----STLVTNVS 180
           IAR FFDLQDMLGFDKASKTVEWLF KSRSAIKEL+EK+L E N+       S L   VS
Sbjct: 121 IARSFFDLQDMLGFDKASKTVEWLFAKSRSAIKELKEKYLSEGNNYNKSFDFSPLFRKVS 180

Query: 181 LYHDHDQEVPRGKKRRKLRIVDKESRFKARARARARTKAKLIRARFEISKSNFEGNPVGV 240
           ++     E PR KKRRKLR+VDKESR KARARAR RT+AK++R R EISK +FEGNP+G 
Sbjct: 181 VF-----EAPREKKRRKLRVVDKESRSKARARARERTRAKIVR-RLEISKCDFEGNPIGD 240

Query: 241 CKMEDVIEESSTKSKSVANFPQNLGSKAKNSASLISNHCYDKRVSKESCSEIHLLPCSSM 300
           C M DV EE  TK+K   NF    G   +N   L SN        K S   +HLLP SSM
Sbjct: 241 CMMGDVSEEIGTKNK---NFEFERG---ENERFLSSN-------VKNSADHVHLLPGSSM 300

Query: 301 DMGTLSLDTMRASPAGLKLSELDEVDGVLIFYGE 311
           DM ++SLD+ +ASPAGLK+ ELDE+DGVLIFYGE
Sbjct: 301 DMSSMSLDSTKASPAGLKVLELDEIDGVLIFYGE 308

[Close]

BLAST of Carg01813-RA vs. ExPASy TrEMBL
Match: A0A6J1HXZ8 (transcription factor TCP12-like OS=Cucurbita maxima OX=3661 GN=LOC111467675 PE=4 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 2.7e-76
Identity = 195/334 (58.38%), Postives = 226/334 (67.66%), Query Frame = 0


Query: 1   MLASSIDNSIQIHDERFQ-----QTIDCYNFNPFLDDHDFIFGHILY------------- 60
           MLAS   N+ QIHDE        Q ID YNF+PFLD+ DFI   ILY             
Sbjct: 1   MLAS---NTNQIHDEHESHQLSLQFIDYYNFDPFLDE-DFILSQILYTQKQQFLDANNFE 60

Query: 61  PEIGLG-SANNTSNDTTTAHKASSQDNPISRKRSSGAKDRHSKICTSKGPRDRRMRLSLE 120
           PEIG   S NNT+ + T   KA  Q  PISRKRSS  KDRHSKICTSKGPRDRRMRLS+E
Sbjct: 61  PEIGFEISVNNTNEEIT--QKALPQKKPISRKRSSN-KDRHSKICTSKGPRDRRMRLSIE 120

Query: 121 IARRFFDLQDMLGFDKASKTVEWLFTKSRSAIKELREKFLLEANSSE-----STLVTNVS 180
           IAR FFDLQDMLGFDKASKTVEWLF KSRSAIKEL+EK+L E+++       S L   VS
Sbjct: 121 IARSFFDLQDMLGFDKASKTVEWLFAKSRSAIKELKEKYLSESHNYNKSFDFSPLFRKVS 180

Query: 181 LYHDHDQEVPRGKKRRKLRIVDKESRFKARARARARTKAKLIRARFEISKSNFEGNPVGV 240
           ++     E PR KKRRKLR+VDKESR KARARAR RT+AK++  R EISK +FEGNP+G 
Sbjct: 181 VF-----EAPREKKRRKLRVVDKESRSKARARARERTRAKIVH-RLEISKCDFEGNPIGD 240

Query: 241 CKMEDVIEESSTKSKSVANFPQNLGSKAKNSASLISNHCYDKRVSKESCSEIHLLPCSSM 300
           C M DV EE  TK+K +  F Q     ++N   L SN        + S   +HLLP SSM
Sbjct: 241 CMMGDVSEEIGTKNK-IFEFKQ-----SENERFLSSN-------VENSADHVHLLPGSSM 300

Query: 301 DMGTLSLDTMRASPAGLKLSELDEVDGVLIFYGE 311
           DM ++SLD+++ASPAGLKL ELDE+DG LIFYGE
Sbjct: 301 DMSSMSLDSIKASPAGLKLLELDEIDGGLIFYGE 308

[Close]

BLAST of Carg01813-RA vs. TAIR 10
Match: AT1G68800.1 (TCP domain protein 12 )

HSP 1 Score: 117.9 bits (294), Expect = 1.5e-26
Identity = 70/146 (47.95%), Postives = 95/146 (65.07%), Query Frame = 0


Query: 65  SQDNPISRKRSSGAKDRHSKICTSKGPRDRRMRLSLEIARRFFDLQDMLGFDKASKTVEW 124
           S    +  +R+   +DRHSKICT++GPRDRRMRLSL+IAR+FFDLQDMLGFDKASKT+EW
Sbjct: 99  STSQEVQWRRTVKKRDRHSKICTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEW 158

Query: 125 LFTKSRSAIKELREKFLLEANSSESTLVTNVSLYHDHDQEVPRGKKRRKL---RIVDKES 184
           LF+KS+++IK+L+E+        +   +       D   ++   K+R K        KES
Sbjct: 159 LFSKSKTSIKQLKERVAASEGGGKDEHLQVDEKEKDETLKLRVSKRRTKTMESSFKTKES 218

Query: 185 RFKARARARARTKAKLIRARFEISKS 208
           R +AR RAR RT AK+    FE S++
Sbjct: 219 RERARKRARERTMAKMKMRLFETSET 244

[Close]

BLAST of Carg01813-RA vs. TAIR 10
Match: AT1G53230.1 (TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 )

HSP 1 Score: 89.4 bits (220), Expect = 5.7e-18
Identity = 41/65 (63.08%), Postives = 54/65 (83.08%), Query Frame = 0


Query: 74  RSSGAKDRHSKICTSKGPRDRRMRLSLEIARRFFDLQDMLGFDKASKTVEWLFTKSRSAI 133
           RS+G KDRHSK+CT+KGPRDRR+RLS   A +F+D+QD LGFD+ SK V+WL TK++SAI
Sbjct: 45  RSTGRKDRHSKVCTAKGPRDRRVRLSAPTAIQFYDVQDRLGFDRPSKAVDWLITKAKSAI 104

Query: 134 KELRE 139
            +L +
Sbjct: 105 DDLAQ 109

[Close]

BLAST of Carg01813-RA vs. TAIR 10
Match: AT1G67260.1 (TCP family transcription factor )

HSP 1 Score: 89.4 bits (220), Expect = 5.7e-18
Identity = 44/58 (75.86%), Postives = 52/58 (89.66%), Query Frame = 0


Query: 79  KDRHSKICTSKGPRDRRMRLSLEIARRFFDLQDMLGFDKASKTVEWLFTKSRSAIKEL 137
           KDRHSKI T++G RDRR+RLS+ IAR+FFDLQDMLGFDKASKT++WL  KSR AIKE+
Sbjct: 88  KDRHSKIQTAQGIRDRRVRLSIGIARQFFDLQDMLGFDKASKTLDWLLKKSRKAIKEV 145

[Close]

BLAST of Carg01813-RA vs. TAIR 10
Match: AT1G67260.2 (TCP family transcription factor )

HSP 1 Score: 89.4 bits (220), Expect = 5.7e-18
Identity = 44/58 (75.86%), Postives = 52/58 (89.66%), Query Frame = 0


Query: 79  KDRHSKICTSKGPRDRRMRLSLEIARRFFDLQDMLGFDKASKTVEWLFTKSRSAIKEL 137
           KDRHSKI T++G RDRR+RLS+ IAR+FFDLQDMLGFDKASKT++WL  KSR AIKE+
Sbjct: 88  KDRHSKIQTAQGIRDRRVRLSIGIARQFFDLQDMLGFDKASKTLDWLLKKSRKAIKEV 145

[Close]

BLAST of Carg01813-RA vs. TAIR 10
Match: AT3G18550.2 (TCP family transcription factor )

HSP 1 Score: 84.0 bits (206), Expect = 2.4e-16
Identity = 77/250 (30.80%), Postives = 115/250 (46.00%), Query Frame = 0


Query: 63  ASSQDNPISRKRSSGAKDRHSKICTSKGPRDRRMRLSLEIARRFFDLQDMLGFDKASKTV 122
           ++SQD  + + +     DRHSKI T+KG RDRRMRLSL++A+  F LQDMLGFDKASKTV
Sbjct: 133 STSQDPKMKKAKKPSRTDRHSKIKTAKGTRDRRMRLSLDVAKELFGLQDMLGFDKASKTV 192

Query: 123 EWLFTKSRSAIKELR------------EKFLLEANSSESTLVTNVSLY------------ 182
           EWL T+++  I ++             ++  + +  + S L    S++            
Sbjct: 193 EWLLTQAKPEIIKIATTLSHHGCFSSGDESHIRSMDTSSDLCELASMWTVDDRGSNTNTT 252

Query: 183 ----HDHDQEVPRGKKRRK------LRIVDKESRFKARARARARTKAKLIRARFEISKSN 242
               +  D    RGK++R       L+ + KE R KAR RA+ RT  K++          
Sbjct: 253 ETRGNKVDGRSMRGKRKRPEPRTPILKKLSKEERAKARERAKGRTMEKMMM--------- 312

Query: 243 FEGNPVGVCKMEDVIEESSTKSKSVANFPQNLGSKAKNSASLISNHCYDKRVSKESCSEI 279
                 G  ++  V+EE +     +    +N      N +S    HC DK   +E C   
Sbjct: 313 ---KMKGRSQLVKVVEEDAHDHGEII---KNNNRSQVNRSSFEMTHCEDK--IEELCKND 365

The following BLAST results are available for this feature:

BLAST of Carg01813-RA vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7032105.1	6.9e-167	100.00	Transcription factor TCP12, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022957318.1	2.2e-165	99.36	transcription factor CYCLOIDEA-like [Cucurbita moschata]	[more]
XP_023515134.1	1.5e-158	97.43	transcription factor CYCLOIDEA-like [Cucurbita pepo subsp. pepo]	[more]
XP_022984046.1	1.8e-151	93.93	transcription factor CYCLOIDEA-like [Cucurbita maxima]	[more]
XP_038893072.1	1.9e-100	64.77	transcription factor TCP18-like [Benincasa hispida]	[more]

BLAST of Carg01813-RA vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A0AQW4	2.1e-25	47.95	Transcription factor TCP12 OS=Arabidopsis thaliana OX=3702 GN=TCP12 PE=2 SV=1	[more]
Q9SBV6	6.3e-22	41.85	Transcription factor CYCLOIDEA (Fragment) OS=Antirrhinum linkianum OX=102601 GN=...	[more]
O49250	6.3e-22	41.85	Transcription factor CYCLOIDEA OS=Antirrhinum majus OX=4151 GN=CYC PE=1 SV=1	[more]
Q9SBV9	1.4e-21	41.49	Transcription factor CYCLOIDEA (Fragment) OS=Antirrhinum cirrhigerum OX=102600 G...	[more]
Q9SNW8	2.0e-20	44.79	Transcription factor DICHOTOMA OS=Antirrhinum majus OX=4151 GN=DICH PE=2 SV=1	[more]

BLAST of Carg01813-RA vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GZV4	1.1e-165	99.36	transcription factor CYCLOIDEA-like OS=Cucurbita moschata OX=3662 GN=LOC11145875...	[more]
A0A6J1J441	8.8e-152	93.93	transcription factor CYCLOIDEA-like OS=Cucurbita maxima OX=3661 GN=LOC111482452 ...	[more]
A0A0A0KT45	1.5e-82	58.60	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G608320 PE=4 SV=1	[more]
A0A6J1G0U4	4.9e-78	59.58	transcription factor TCP12-like OS=Cucurbita moschata OX=3662 GN=LOC111449645 PE...	[more]
A0A6J1HXZ8	2.7e-76	58.38	transcription factor TCP12-like OS=Cucurbita maxima OX=3661 GN=LOC111467675 PE=4...	[more]

BLAST of Carg01813-RA vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68800.1	1.5e-26	47.95	TCP domain protein 12	[more]
AT1G53230.1	5.7e-18	63.08	TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3	[more]
AT1G67260.1	5.7e-18	75.86	TCP family transcription factor	[more]
AT1G67260.2	5.7e-18	75.86	TCP family transcription factor	[more]
AT3G18550.2	2.4e-16	30.80	TCP family transcription factor	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017887	Transcription factor TCP subgroup	PFAM	PF03634	TCP	coord: 77..196 e-value: 7.9E-35 score: 120.7
IPR017887	Transcription factor TCP subgroup	PROSITE	PS51369	TCP	coord: 78..136 score: 36.834595
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 52..72
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 52..92
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 73..92
None	No IPR available	PANTHER	PTHR31072:SF118	TRANSCRIPTION FACTOR TCP12	coord: 55..247
IPR005333	Transcription factor, TCP	PANTHER	PTHR31072	TRANSCRIPTION FACTOR TCP4-RELATED	coord: 55..247
IPR017888	CYC/TB1, R domain	PROSITE	PS51370	R	coord: 179..196 score: 10.37083

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg01813	Carg01813	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg01813-RA:2	Carg01813-RA:2	exon
Carg01813-RA:1	Carg01813-RA:1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg01813-RA:cds	Carg01813-RA:cds	CDS
Carg01813-RA:cds	Carg01813-RA:cds_2	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg01813-RA	Carg01813-RA-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003700	DNA-binding transcription factor activity