Carg01776-RA (mRNA) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg01776-RA
Type	mRNA
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	DNA glycosylase superfamily protein
Location	Carg_Chr04: 9376831 .. 9378865 (+)
Sequence length	1655
RNA-Seq Expression	Carg01776-RA
Synteny	Carg01776-RA

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATGTCATCCAAAGCCACTGTTAGAAGGCGAATTCTGGAGAGGCAAACATGTTCTAAAGAGAAAGATAGAACAAGCCAAAACATATTGTCTAAACACCTTAAGAAGATTTACCCAATTGGGCTTCAAAGAACCACTTCATCACTCTCTTTATCTTCATTATCATTGTCTTTGTCCCAAAATTCAAATGATTCTTCTCTTACAGACTCCTCGATCCATCTCGATCAGAAGATTTCGTATGCGATTCGTTTGATTACGCCGCTGCCTCCTGAAAGAAGAGAAGCTCCATTGCCTAAGAGTGTCCAACAACAATGTCAGGAACTTGGTGATGGGGAACTCAGGAGGTGCAACTGGATCACTCATACCAGTGGTAAGATTACACTTAGTTCTGATATGGACTTAGAATACTTTCCACCACATTGCTAGACTAGTTCATGATTGACGTTTCTATCTCGTGTACTCGACACAGATAAAGCCTATGTATCCTTTCACGACGAGTGTTGGGGCGTCCCAGTGTATGACGACAAGTAGGTGATCTAAGTAACTTTTCCGTTTATCCTGCATATCAGTTTATAGATTTGTGAGTTGACATTAGAGAAAAATTACCATACAGCCGACTTTTCGAGCTACTCGCTCTATCGGGGATGCTGATGGACTACAATTGGACTGAAATTGTGAAAAGAAGGGAACTATTCAGGTAATATTTTCTGATCCGATGTGTACTTTGGATGAACATCTATGAGATGATAAATGTATATATACACAACTGGTTGGTCATAGAGAAGCTTTTGCTGGATTTGAGGCAAGTACTGTGGCCAACATGGGGGAGAAAGAGATATCAGATATAGCATCTGACAAGGCCATTATGCTGGTGGAGAGCAGAGTGAGGTGCATAGTAGACAATGCCAAGTGCATATTGAAGGCAAGCTAGATCACCTCATTTTTTAACCAACTCTTTCACAGAATGTATATTAACAAGAACAACTGGTTTTTTGATTCAACTGCAGATAGCTAGAGATTTTGGGTCGTTCAGTAACTATATGTGGAGCTATATGAACTTCAAACCAACAATAAACAGATTTAGATATCCAAGAAATGTTCCCCTGAGGAGTCCCAAAGCAGAAGCCATTAGCAAGGACATGGTGAAGCGCGGTTTTCGGTTTGTTGGGCCAGTGATTGTCTATTCGTTCATGCAGGCGGCAGGGTTGACGATCGATCATCTTGTGGACTGTTTTCGGCATGGCGAATGCGTAAATCTTGCAGAAAGACCATGGAGACATATCTGAGTTCAACATTTCCTACTTTCCCTTCAAAGTTGTGGTTGTTTTGCTTTTGTGAGCATTAAGTTAACAATATAAAAAATTATGCATAGAGAAAGAGAGAGGAACTAAGATGGAACTTCTCTGCTTCTTTGTTTATCAGTTTCTGCTAGAATGGCCAATTCTGCAACTGAGCAATTCATCAGTTGATATCAAAAAGTGTGCAGAGCTCAGCATTACAACAGTTGCAGAGCAGCCATGGTAATCGACAAGTTGAAGCTGGTGGAGAATAAGATTGGTGTATTTAATTTGTTTATGCTTCTAATATATAACTAATTATTTTAGATGTTTGGTGTGGATCTCTTGGGTCAAAATTGCTTATCTATGAGCTTTCTCATACATTCTAAACAAGCTCTCATTTCCTAAGACATTAAGAACCAAGAATGTTCTTTGTTCATGAAGAACTTCATGATACAACTAAGTTCATCAAAGCAGACATGACCATAGAAAACTGCAGTCTAGTTACAGTTCATAAGATCCAAATATGTAATACAAACCTCGTTATATCATCCCTCGCCTCGAGAAATGTCGATCGAGTTTCGAGATAGCACTCCAAGCCTGGTCCTTCAAATTGGCTGAGAATCAAGTCCATAGATCATCTTTCTCCCCCATCTGCTGGGCCAAAAAAGCTTTACCAAGATTAGTTGTAATCCTGCTACGAAGGATTCTCTCAATGTGTGAGATCCCACGCATCAGTTGGAGAGGAGAACGAAACATT

mRNA sequence

TATGTCATCCAAAGCCACTGTTAGAAGGCGAATTCTGGAGAGGCAAACATGTTCTAAAGAGAAAGATAGAACAAGCCAAAACATATTGTCTAAACACCTTAAGAAGATTTACCCAATTGGGCTTCAAAGAACCACTTCATCACTCTCTTTATCTTCATTATCATTGTCTTTGTCCCAAAATTCAAATGATTCTTCTCTTACAGACTCCTCGATCCATCTCGATCAGAAGATTTCGTATGCGATTCGTTTGATTACGCCGCTGCCTCCTGAAAGAAGAGAAGCTCCATTGCCTAAGAGTGTCCAACAACAATGTCAGGAACTTGGTGATGGGGAACTCAGGAGGTGCAACTGGATCACTCATACCAGTGATAAAGCCTATGTATCCTTTCACGACGAGTGTTGGGGCGTCCCAGTGTATGACGACAACCGACTTTTCGAGCTACTCGCTCTATCGGGGATGCTGATGGACTACAATTGGACTGAAATTGTGAAAAGAAGGGAACTATTCAGAGAAGCTTTTGCTGGATTTGAGGCAAGTACTGTGGCCAACATGGGGGAGAAAGAGATATCAGATATAGCATCTGACAAGGCCATTATGCTGGTGGAGAGCAGAGTGAGGTGCATAATAGCTAGAGATTTTGGGTCGTTCAGTAACTATATGTGGAGCTATATGAACTTCAAACCAACAATAAACAGATTTAGATATCCAAGAAATGTTCCCCTGAGGAGTCCCAAAGCAGAAGCCATTAGCAAGGACATGGTGAAGCGCGGTTTTCGGTTTGTTGGGCCAGTGATTGTCTATTCGTTCATGCAGGCGGCAGGGTTGACGATCGATCATCTTGTGGACTGTTTTCGGCATGGCGAATGCGTAAATCTTGCAGAAAGACCATGGAGACATATCTGAGTTCAACATTTCCTACTTTCCCTTCAAAGTTGTGGTTGTTTTGCTTTTGTGAGCATTAAGTTAACAATATAAAAAATTATGCATAGAGAAAGAGAGAGGAACTAAGATGGAACTTCTCTGCTTCTTTGTTTATCAGTTTCTGCTAGAATGGCCAATTCTGCAACTGAGCAATTCATCAGTTGATATCAAAAAGTGTGCAGAGCTCAGCATTACAACAGTTGCAGAGCAGCCATGGTAATCGACAAGTTGAAGCTGGTGGAGAATAAGATTGGTGTATTTAATTTGTTTATGCTTCTAATATATAACTAATTATTTTAGATGTTTGGTGTGGATCTCTTGGGTCAAAATTGCTTATCTATGAGCTTTCTCATACATTCTAAACAAGCTCTCATTTCCTAAGACATTAAGAACCAAGAATGTTCTTTGTTCATGAAGAACTTCATGATACAACTAAGTTCATCAAAGCAGACATGACCATAGAAAACTGCAGTCTAGTTACAGTTCATAAGATCCAAATATGTAATACAAACCTCGTTATATCATCCCTCGCCTCGAGAAATGTCGATCGAGTTTCGAGATAGCACTCCAAGCCTGGTCCTTCAAATTGGCTGAGAATCAAGTCCATAGATCATCTTTCTCCCCCATCTGCTGGGCCAAAAAAGCTTTACCAAGATTAGTTGTAATCCTGCTACGAAGGATTCTCTCAATGTGTGAGATCCCACGCATCAGTTGGAGAGGAGAACGAAACATT

Coding sequence (CDS)

ATGTCATCCAAAGCCACTGTTAGAAGGCGAATTCTGGAGAGGCAAACATGTTCTAAAGAGAAAGATAGAACAAGCCAAAACATATTGTCTAAACACCTTAAGAAGATTTACCCAATTGGGCTTCAAAGAACCACTTCATCACTCTCTTTATCTTCATTATCATTGTCTTTGTCCCAAAATTCAAATGATTCTTCTCTTACAGACTCCTCGATCCATCTCGATCAGAAGATTTCGTATGCGATTCGTTTGATTACGCCGCTGCCTCCTGAAAGAAGAGAAGCTCCATTGCCTAAGAGTGTCCAACAACAATGTCAGGAACTTGGTGATGGGGAACTCAGGAGGTGCAACTGGATCACTCATACCAGTGATAAAGCCTATGTATCCTTTCACGACGAGTGTTGGGGCGTCCCAGTGTATGACGACAACCGACTTTTCGAGCTACTCGCTCTATCGGGGATGCTGATGGACTACAATTGGACTGAAATTGTGAAAAGAAGGGAACTATTCAGAGAAGCTTTTGCTGGATTTGAGGCAAGTACTGTGGCCAACATGGGGGAGAAAGAGATATCAGATATAGCATCTGACAAGGCCATTATGCTGGTGGAGAGCAGAGTGAGGTGCATAATAGCTAGAGATTTTGGGTCGTTCAGTAACTATATGTGGAGCTATATGAACTTCAAACCAACAATAAACAGATTTAGATATCCAAGAAATGTTCCCCTGAGGAGTCCCAAAGCAGAAGCCATTAGCAAGGACATGGTGAAGCGCGGTTTTCGGTTTGTTGGGCCAGTGATTGTCTATTCGTTCATGCAGGCGGCAGGGTTGACGATCGATCATCTTGTGGACTGTTTTCGGCATGGCGAATGCGTAAATCTTGCAGAAAGACCATGGAGACATATCTGA

Protein sequence

MSSKATVRRRILERQTCSKEKDRTSQNILSKHLKKIYPIGLQRTTSSLSLSSLSLSLSQNSNDSSLTDSSIHLDQKISYAIRLITPLPPERREAPLPKSVQQQCQELGDGELRRCNWITHTSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRRELFREAFAGFEASTVANMGEKEISDIASDKAIMLVESRVRCIIARDFGSFSNYMWSYMNFKPTINRFRYPRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTIDHLVDCFRHGECVNLAERPWRHI

Homology

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BLAST of Carg01776-RA vs. NCBI nr
Match: KAG7032142.1 (guaA [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 601.7 bits (1550), Expect = 3.5e-168
Identity = 300/300 (100.00%), Postives = 300/300 (100.00%), Query Frame = 0


Query: 1   MSSKATVRRRILERQTCSKEKDRTSQNILSKHLKKIYPIGLQRTTSSLSLSSLSLSLSQN 60
           MSSKATVRRRILERQTCSKEKDRTSQNILSKHLKKIYPIGLQRTTSSLSLSSLSLSLSQN
Sbjct: 1   MSSKATVRRRILERQTCSKEKDRTSQNILSKHLKKIYPIGLQRTTSSLSLSSLSLSLSQN 60

Query: 61  SNDSSLTDSSIHLDQKISYAIRLITPLPPERREAPLPKSVQQQCQELGDGELRRCNWITH 120
           SNDSSLTDSSIHLDQKISYAIRLITPLPPERREAPLPKSVQQQCQELGDGELRRCNWITH
Sbjct: 61  SNDSSLTDSSIHLDQKISYAIRLITPLPPERREAPLPKSVQQQCQELGDGELRRCNWITH 120

Query: 121 TSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRRELFREAFAGFEAST 180
           TSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRRELFREAFAGFEAST
Sbjct: 121 TSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRRELFREAFAGFEAST 180

Query: 181 VANMGEKEISDIASDKAIMLVESRVRCIIARDFGSFSNYMWSYMNFKPTINRFRYPRNVP 240
           VANMGEKEISDIASDKAIMLVESRVRCIIARDFGSFSNYMWSYMNFKPTINRFRYPRNVP
Sbjct: 181 VANMGEKEISDIASDKAIMLVESRVRCIIARDFGSFSNYMWSYMNFKPTINRFRYPRNVP 240

Query: 241 LRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTIDHLVDCFRHGECVNLAERPWRHI 300
           LRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTIDHLVDCFRHGECVNLAERPWRHI
Sbjct: 241 LRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTIDHLVDCFRHGECVNLAERPWRHI 300

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BLAST of Carg01776-RA vs. NCBI nr
Match: KAG6601358.1 (hypothetical protein SDJN03_06591, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 594.0 bits (1530), Expect = 7.4e-166
Identity = 300/309 (97.09%), Postives = 300/309 (97.09%), Query Frame = 0


Query: 1   MSSKATVRRRILERQTCSKEKDRTSQNILSKHLKKIYPIGLQRTTSSLSLSSLSLSLSQN 60
           MSSKATVRRRILERQTCSKEKDRTSQNILSKHLKKIYPIGLQRTTSSLSLSSLSLSLSQN
Sbjct: 1   MSSKATVRRRILERQTCSKEKDRTSQNILSKHLKKIYPIGLQRTTSSLSLSSLSLSLSQN 60

Query: 61  SNDSSLTDSSIHLDQKISYAIRLITPLPPERREAPLPKSVQQQCQELGDGELRRCNWITH 120
           SNDSSLTDSSIHLDQKISYAIRLITPLPPERREAPLPKSVQQQCQELGDGELRRCNWITH
Sbjct: 61  SNDSSLTDSSIHLDQKISYAIRLITPLPPERREAPLPKSVQQQCQELGDGELRRCNWITH 120

Query: 121 TSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRRELFREAFAGFEAST 180
           TSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRRELFREAFAGFEAST
Sbjct: 121 TSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRRELFREAFAGFEAST 180

Query: 181 VANMGEKEISDIASDKAIMLVESRVRCI---------IARDFGSFSNYMWSYMNFKPTIN 240
           VANMGEKEISDIASDKAIMLVESRVRCI         IARDFGSFSNYMWSYMNFKPTIN
Sbjct: 181 VANMGEKEISDIASDKAIMLVESRVRCIVDNAKCILKIARDFGSFSNYMWSYMNFKPTIN 240

Query: 241 RFRYPRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTIDHLVDCFRHGECVN 300
           RFRYPRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTIDHLVDCFRHGECVN
Sbjct: 241 RFRYPRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTIDHLVDCFRHGECVN 300

[Close]

BLAST of Carg01776-RA vs. NCBI nr
Match: XP_022956507.1 (uncharacterized protein LOC111458228 [Cucurbita moschata] >XP_022956508.1 uncharacterized protein LOC111458228 [Cucurbita moschata])

HSP 1 Score: 588.2 bits (1515), Expect = 4.0e-164
Identity = 298/309 (96.44%), Postives = 298/309 (96.44%), Query Frame = 0


Query: 1   MSSKATVRRRILERQTCSKEKDRTSQNILSKHLKKIYPIGLQRTTSSLSLSSLSLSLSQN 60
           MSSKATVRRRILERQTCSKEKDRTSQNILSKHLKKIYPIGLQRTTSSLSLSSLSLSLSQN
Sbjct: 1   MSSKATVRRRILERQTCSKEKDRTSQNILSKHLKKIYPIGLQRTTSSLSLSSLSLSLSQN 60

Query: 61  SNDSSLTDSSIHLDQKISYAIRLITPLPPERREAPLPKSVQQQCQELGDGELRRCNWITH 120
           SNDSSLTDSSI LDQKISYAIRLITP PPERREAPLPKSVQQQCQELGDGELRRCNWITH
Sbjct: 61  SNDSSLTDSSIQLDQKISYAIRLITPPPPERREAPLPKSVQQQCQELGDGELRRCNWITH 120

Query: 121 TSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRRELFREAFAGFEAST 180
           TSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRRELFREAFAGFEAST
Sbjct: 121 TSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRRELFREAFAGFEAST 180

Query: 181 VANMGEKEISDIASDKAIMLVESRVRCI---------IARDFGSFSNYMWSYMNFKPTIN 240
           VANMGEKEISDIASDKAIMLVESRVRCI         IARDFGSFSNYMWSYMNFKPTIN
Sbjct: 181 VANMGEKEISDIASDKAIMLVESRVRCIVDNAKCILKIARDFGSFSNYMWSYMNFKPTIN 240

Query: 241 RFRYPRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTIDHLVDCFRHGECVN 300
           RFRYPRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTIDHLVDCFRHGECVN
Sbjct: 241 RFRYPRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTIDHLVDCFRHGECVN 300

[Close]

BLAST of Carg01776-RA vs. NCBI nr
Match: XP_022993235.1 (uncharacterized protein LOC111489316 [Cucurbita maxima] >XP_022993244.1 uncharacterized protein LOC111489316 [Cucurbita maxima])

HSP 1 Score: 580.1 bits (1494), Expect = 1.1e-161
Identity = 296/310 (95.48%), Postives = 297/310 (95.81%), Query Frame = 0


Query: 1   MSSKATVRRRILERQTCSKEKDRTSQNILSKHLKKIYPIGLQRTTSSLSLSSLSLSLSQN 60
           MSSKATVRRRILERQTC KEKDRTSQNILSKHLKKIYPIGLQRTTSSLSLSSLSLSLSQN
Sbjct: 1   MSSKATVRRRILERQTCPKEKDRTSQNILSKHLKKIYPIGLQRTTSSLSLSSLSLSLSQN 60

Query: 61  SNDSSLTDSSIHLDQKISYAIRLIT-PLPPERREAPLPKSVQQQCQELGDGELRRCNWIT 120
           SNDSSLTDSSI LD+KISYAIRLIT P PPERREAPLPKSVQQQCQELGDGELRRCNWIT
Sbjct: 61  SNDSSLTDSSIQLDRKISYAIRLITPPPPPERREAPLPKSVQQQCQELGDGELRRCNWIT 120

Query: 121 HTSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRRELFREAFAGFEAS 180
           HTSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRRELFREAFAGFEAS
Sbjct: 121 HTSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRRELFREAFAGFEAS 180

Query: 181 TVANMGEKEISDIASDKAIMLVESRVRCI---------IARDFGSFSNYMWSYMNFKPTI 240
           TVANMGEKEISDIASDKAIMLVESRVRCI         IARDFGSFSNYMWSYMNFKPTI
Sbjct: 181 TVANMGEKEISDIASDKAIMLVESRVRCIVDNAKCILKIARDFGSFSNYMWSYMNFKPTI 240

Query: 241 NRFRYPRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTIDHLVDCFRHGECV 300
           NRFRYPRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTIDHLVDCFRHGECV
Sbjct: 241 NRFRYPRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTIDHLVDCFRHGECV 300

[Close]

BLAST of Carg01776-RA vs. NCBI nr
Match: XP_023528370.1 (uncharacterized protein LOC111791309 [Cucurbita pepo subsp. pepo] >XP_023528377.1 uncharacterized protein LOC111791309 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 578.2 bits (1489), Expect = 4.2e-161
Identity = 295/312 (94.55%), Postives = 296/312 (94.87%), Query Frame = 0


Query: 1   MSSKATVRRRILERQTCSKEKDRTSQNILSKHLKKIYPIGLQRTTSSLSLSSLSLSLSQN 60
           MSSKATVRRRILERQTC KEKDRTSQNILSKHLKKIYPIGLQRTTSSLSLSS SLSLSQN
Sbjct: 1   MSSKATVRRRILERQTCPKEKDRTSQNILSKHLKKIYPIGLQRTTSSLSLSSFSLSLSQN 60

Query: 61  SNDSSLTDSSIHLDQKISYAIRLIT---PLPPERREAPLPKSVQQQCQELGDGELRRCNW 120
           SNDSSLTDSSI LDQKISYAIRLIT   P PPERREAPLPKSVQQQCQELGDGELRRCNW
Sbjct: 61  SNDSSLTDSSIQLDQKISYAIRLITPPPPPPPERREAPLPKSVQQQCQELGDGELRRCNW 120

Query: 121 ITHTSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRRELFREAFAGFE 180
           ITHTSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRRELFREAFAGFE
Sbjct: 121 ITHTSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRRELFREAFAGFE 180

Query: 181 ASTVANMGEKEISDIASDKAIMLVESRVRCI---------IARDFGSFSNYMWSYMNFKP 240
           ASTVANMGEKEI+DIASDKAIMLVESRVRCI         IARDFGSFSNYMWSYMNFKP
Sbjct: 181 ASTVANMGEKEIADIASDKAIMLVESRVRCIVDNAKCILKIARDFGSFSNYMWSYMNFKP 240

Query: 241 TINRFRYPRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTIDHLVDCFRHGE 300
           TINRFRYPRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTIDHLVDCFRHGE
Sbjct: 241 TINRFRYPRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTIDHLVDCFRHGE 300

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BLAST of Carg01776-RA vs. ExPASy Swiss-Prot
Match: Q7VG78 (Probable GMP synthase [glutamine-hydrolyzing] OS=Helicobacter hepaticus (strain ATCC 51449 / 3B1) OX=235279 GN=guaA PE=3 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 1.1e-34
Identity = 73/204 (35.78%), Postives = 115/204 (56.37%), Query Frame = 0


Query: 96  LPKSVQQQCQELGDG--ELRRCNWITHTSD---KAYVSFHDECWGVPVYDDNRLFELLAL 155
           L KS+  + Q+  +G  E  RC W T   +   K Y  +HD  WG P+++D +LFE L L
Sbjct: 767 LQKSLGLEAQDSNEGVREKVRCAWATDKDEAARKLYEDYHDTEWGEPLHEDKKLFEHLVL 826

Query: 156 SGMLMDYNWTEIVKRRELFREAFAGFEASTVANMGEKEISDIASDKAIM---------LV 215
            G     +W  I+K+RE FR AF  F+   VAN  E +I ++  ++ I+         ++
Sbjct: 827 EGFQAGLSWITILKKREAFRVAFDDFDPHIVANYDEDKIKELMRNEGIIRNRAKIEAAII 886

Query: 216 ESRVRCIIARDFGSFSNYMWSYMNFKPTINRFRYPRNVPLRSPKAEAISKDMVKRGFRFV 275
            ++    + R+FGSF  Y+W ++  KP IN F    ++P  +P ++ I+KD+ KRGF+FV
Sbjct: 887 NAKAFMAVQREFGSFDKYIWGFVGGKPIINAFESIADLPASTPLSDKIAKDLKKRGFKFV 946

Query: 276 GPVIVYSFMQAAGLTIDHLVDCFR 286
           G   +Y+ MQ+ G+  DHL  CF+
Sbjct: 947 GTTTMYAMMQSIGMVNDHLTSCFK 970

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BLAST of Carg01776-RA vs. ExPASy Swiss-Prot
Match: P05100 (DNA-3-methyladenine glycosylase 1 OS=Escherichia coli (strain K12) OX=83333 GN=tag PE=1 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 8.0e-30
Identity = 61/181 (33.70%), Postives = 102/181 (56.35%), Query Frame = 0


Query: 112 LRRCNWITHTSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRRELFRE 171
           + RC W+  + D  Y+++HD  WGVP  D  +LFE++ L G     +W  ++K+RE +R 
Sbjct: 1   MERCGWV--SQDPLYIAYHDNEWGVPETDSKKLFEMICLEGQQAGLSWITVLKKRENYRA 60

Query: 172 AFAGFEASTVANMGEKEISDIASDKAIMLVESRVRCIIA---------RDFGSFSNYMWS 231
            F  F+   VA M E+++  +  D  I+    +++ II          ++   F +++WS
Sbjct: 61  CFHQFDPVKVAAMQEEDVERLVQDAGIIRHRGKIQAIIGNARAYLQMEQNGEPFVDFVWS 120

Query: 232 YMNFKPTINRFRYPRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTIDHLVD 284
           ++N +P + +      +P  +  ++A+SK + KRGF+FVG  I YSFMQA GL  DH+V 
Sbjct: 121 FVNHQPQVTQATTLSEIPTSTSASDALSKALKKRGFKFVGTTICYSFMQACGLVNDHVVG 179

[Close]

BLAST of Carg01776-RA vs. ExPASy Swiss-Prot
Match: P44321 (DNA-3-methyladenine glycosylase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=tag PE=3 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 7.5e-28
Identity = 61/179 (34.08%), Postives = 102/179 (56.98%), Query Frame = 0


Query: 114 RCNWITHTSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRRELFREAF 173
           RC W+   S   Y+ +HD+ WG P +D  +LFE + L G     +W  ++K+RE +REAF
Sbjct: 4   RCPWVGEQS--IYIDYHDKEWGKPEFDSQKLFEKICLEGQQAGLSWITVLKKRESYREAF 63

Query: 174 AGFEASTVANMGEKEISDIASDKAIMLVESRVRCII--ARDF-------GSFSNYMWSYM 233
             F+   +A M   +I     +  ++   +++  I+  A+ +        +FS+++WS++
Sbjct: 64  HQFDPKKIAKMTALDIDACMQNSGLIRHRAKLEAIVKNAKAYLAMEKCGENFSDFIWSFV 123

Query: 234 NFKPTINRFRYPRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTIDHLVDC 284
           N KP +N     R+VP ++  ++A+SK + KRGF F+G    Y+FMQ+ GL  DHL DC
Sbjct: 124 NHKPIVNDVPDLRSVPTKTEVSKALSKALKKRGFVFIGETTCYAFMQSMGLVDDHLNDC 180

[Close]

BLAST of Carg01776-RA vs. ExPASy TrEMBL
Match: A0A6J1GX19 (uncharacterized protein LOC111458228 OS=Cucurbita moschata OX=3662 GN=LOC111458228 PE=4 SV=1)

HSP 1 Score: 588.2 bits (1515), Expect = 2.0e-164
Identity = 298/309 (96.44%), Postives = 298/309 (96.44%), Query Frame = 0


Query: 1   MSSKATVRRRILERQTCSKEKDRTSQNILSKHLKKIYPIGLQRTTSSLSLSSLSLSLSQN 60
           MSSKATVRRRILERQTCSKEKDRTSQNILSKHLKKIYPIGLQRTTSSLSLSSLSLSLSQN
Sbjct: 1   MSSKATVRRRILERQTCSKEKDRTSQNILSKHLKKIYPIGLQRTTSSLSLSSLSLSLSQN 60

Query: 61  SNDSSLTDSSIHLDQKISYAIRLITPLPPERREAPLPKSVQQQCQELGDGELRRCNWITH 120
           SNDSSLTDSSI LDQKISYAIRLITP PPERREAPLPKSVQQQCQELGDGELRRCNWITH
Sbjct: 61  SNDSSLTDSSIQLDQKISYAIRLITPPPPERREAPLPKSVQQQCQELGDGELRRCNWITH 120

Query: 121 TSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRRELFREAFAGFEAST 180
           TSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRRELFREAFAGFEAST
Sbjct: 121 TSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRRELFREAFAGFEAST 180

Query: 181 VANMGEKEISDIASDKAIMLVESRVRCI---------IARDFGSFSNYMWSYMNFKPTIN 240
           VANMGEKEISDIASDKAIMLVESRVRCI         IARDFGSFSNYMWSYMNFKPTIN
Sbjct: 181 VANMGEKEISDIASDKAIMLVESRVRCIVDNAKCILKIARDFGSFSNYMWSYMNFKPTIN 240

Query: 241 RFRYPRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTIDHLVDCFRHGECVN 300
           RFRYPRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTIDHLVDCFRHGECVN
Sbjct: 241 RFRYPRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTIDHLVDCFRHGECVN 300

[Close]

BLAST of Carg01776-RA vs. ExPASy TrEMBL
Match: A0A6J1JY14 (uncharacterized protein LOC111489316 OS=Cucurbita maxima OX=3661 GN=LOC111489316 PE=4 SV=1)

HSP 1 Score: 580.1 bits (1494), Expect = 5.3e-162
Identity = 296/310 (95.48%), Postives = 297/310 (95.81%), Query Frame = 0


Query: 1   MSSKATVRRRILERQTCSKEKDRTSQNILSKHLKKIYPIGLQRTTSSLSLSSLSLSLSQN 60
           MSSKATVRRRILERQTC KEKDRTSQNILSKHLKKIYPIGLQRTTSSLSLSSLSLSLSQN
Sbjct: 1   MSSKATVRRRILERQTCPKEKDRTSQNILSKHLKKIYPIGLQRTTSSLSLSSLSLSLSQN 60

Query: 61  SNDSSLTDSSIHLDQKISYAIRLIT-PLPPERREAPLPKSVQQQCQELGDGELRRCNWIT 120
           SNDSSLTDSSI LD+KISYAIRLIT P PPERREAPLPKSVQQQCQELGDGELRRCNWIT
Sbjct: 61  SNDSSLTDSSIQLDRKISYAIRLITPPPPPERREAPLPKSVQQQCQELGDGELRRCNWIT 120

Query: 121 HTSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRRELFREAFAGFEAS 180
           HTSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRRELFREAFAGFEAS
Sbjct: 121 HTSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRRELFREAFAGFEAS 180

Query: 181 TVANMGEKEISDIASDKAIMLVESRVRCI---------IARDFGSFSNYMWSYMNFKPTI 240
           TVANMGEKEISDIASDKAIMLVESRVRCI         IARDFGSFSNYMWSYMNFKPTI
Sbjct: 181 TVANMGEKEISDIASDKAIMLVESRVRCIVDNAKCILKIARDFGSFSNYMWSYMNFKPTI 240

Query: 241 NRFRYPRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTIDHLVDCFRHGECV 300
           NRFRYPRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTIDHLVDCFRHGECV
Sbjct: 241 NRFRYPRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTIDHLVDCFRHGECV 300

[Close]

BLAST of Carg01776-RA vs. ExPASy TrEMBL
Match: A0A0A0KUC5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G606920 PE=4 SV=1)

HSP 1 Score: 560.8 bits (1444), Expect = 3.4e-156
Identity = 283/309 (91.59%), Postives = 290/309 (93.85%), Query Frame = 0


Query: 1   MSSKATVRRRILERQTCSKEKDRTSQNILSKHLKKIYPIGLQRTTSSLSLSSLSLSLSQN 60
           MSSKATVRR ILERQ C KEKDRTSQNILSKHLKKIYPIGLQRTTSSLSLSS+SLSLSQN
Sbjct: 1   MSSKATVRRHILERQACPKEKDRTSQNILSKHLKKIYPIGLQRTTSSLSLSSMSLSLSQN 60

Query: 61  SNDSSLTDSSIHLDQKISYAIRLITPLPPERREAPLPKSVQQQCQELGDGELRRCNWITH 120
           SNDSSLTDSSI LDQKISYAIRLITP PPERRE PLPKS+QQQ QEL DGELRRCNWITH
Sbjct: 61  SNDSSLTDSSIQLDQKISYAIRLITP-PPERREVPLPKSIQQQSQELSDGELRRCNWITH 120

Query: 121 TSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRRELFREAFAGFEAST 180
           TSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRRELFREAFAGFE S 
Sbjct: 121 TSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRRELFREAFAGFEPSV 180

Query: 181 VANMGEKEISDIASDKAIMLVESRVRCI---------IARDFGSFSNYMWSYMNFKPTIN 240
           VANMGEKEI+D+ASDKAIMLVESRVRCI         IARDFGSFSNYMWSY+NFKPTIN
Sbjct: 181 VANMGEKEITDVASDKAIMLVESRVRCIVDNAKCILKIARDFGSFSNYMWSYVNFKPTIN 240

Query: 241 RFRYPRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTIDHLVDCFRHGECVN 300
           RFR+PRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTIDHL+DCFRHGECVN
Sbjct: 241 RFRHPRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTIDHLIDCFRHGECVN 300

[Close]

BLAST of Carg01776-RA vs. ExPASy TrEMBL
Match: A0A5D3CCU6 (DNA-3-methyladenine glycosylase 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G00310 PE=4 SV=1)

HSP 1 Score: 558.1 bits (1437), Expect = 2.2e-155
Identity = 284/309 (91.91%), Postives = 289/309 (93.53%), Query Frame = 0


Query: 1   MSSKATVRRRILERQTCSKEKDRTSQNILSKHLKKIYPIGLQRTTSSLSLSSLSLSLSQN 60
           MSSKATVRR ILERQ C KEKDRTSQNILSKHLKKIYPIGLQRTTSSLSLSSLSLSLSQN
Sbjct: 1   MSSKATVRRHILERQACPKEKDRTSQNILSKHLKKIYPIGLQRTTSSLSLSSLSLSLSQN 60

Query: 61  SNDSSLTDSSIHLDQKISYAIRLITPLPPERREAPLPKSVQQQCQELGDGELRRCNWITH 120
           SNDSSLTDSSI LDQKISYAIRLITP PPERRE PLPKS+QQQ QEL DGELRRCNWITH
Sbjct: 61  SNDSSLTDSSIQLDQKISYAIRLITP-PPERREVPLPKSIQQQSQELSDGELRRCNWITH 120

Query: 121 TSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRRELFREAFAGFEAST 180
           TSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRRELFREAFAGFE S 
Sbjct: 121 TSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRRELFREAFAGFEPSI 180

Query: 181 VANMGEKEISDIASDKAIMLVESRVRCI---------IARDFGSFSNYMWSYMNFKPTIN 240
           VANMGEKEI+DIASDKAIMLVESRVRCI         IARDFGSFSNYMWS +NFKPTIN
Sbjct: 181 VANMGEKEITDIASDKAIMLVESRVRCIVDNAKCILKIARDFGSFSNYMWSSVNFKPTIN 240

Query: 241 RFRYPRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTIDHLVDCFRHGECVN 300
           RFR+PRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTIDHL+DCFRHGECVN
Sbjct: 241 RFRHPRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTIDHLIDCFRHGECVN 300

[Close]

BLAST of Carg01776-RA vs. ExPASy TrEMBL
Match: A0A1S3BEN5 (DNA-3-methyladenine glycosylase 1 OS=Cucumis melo OX=3656 GN=LOC103489204 PE=4 SV=1)

HSP 1 Score: 558.1 bits (1437), Expect = 2.2e-155
Identity = 284/309 (91.91%), Postives = 289/309 (93.53%), Query Frame = 0


Query: 1   MSSKATVRRRILERQTCSKEKDRTSQNILSKHLKKIYPIGLQRTTSSLSLSSLSLSLSQN 60
           MSSKATVRR ILERQ C KEKDRTSQNILSKHLKKIYPIGLQRTTSSLSLSSLSLSLSQN
Sbjct: 1   MSSKATVRRHILERQACPKEKDRTSQNILSKHLKKIYPIGLQRTTSSLSLSSLSLSLSQN 60

Query: 61  SNDSSLTDSSIHLDQKISYAIRLITPLPPERREAPLPKSVQQQCQELGDGELRRCNWITH 120
           SNDSSLTDSSI LDQKISYAIRLITP PPERRE PLPKS+QQQ QEL DGELRRCNWITH
Sbjct: 61  SNDSSLTDSSIQLDQKISYAIRLITP-PPERREVPLPKSIQQQSQELSDGELRRCNWITH 120

Query: 121 TSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRRELFREAFAGFEAST 180
           TSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRRELFREAFAGFE S 
Sbjct: 121 TSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRRELFREAFAGFEPSI 180

Query: 181 VANMGEKEISDIASDKAIMLVESRVRCI---------IARDFGSFSNYMWSYMNFKPTIN 240
           VANMGEKEI+DIASDKAIMLVESRVRCI         IARDFGSFSNYMWS +NFKPTIN
Sbjct: 181 VANMGEKEITDIASDKAIMLVESRVRCIVDNAKCILKIARDFGSFSNYMWSSVNFKPTIN 240

Query: 241 RFRYPRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTIDHLVDCFRHGECVN 300
           RFR+PRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTIDHL+DCFRHGECVN
Sbjct: 241 RFRHPRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTIDHLIDCFRHGECVN 300

[Close]

BLAST of Carg01776-RA vs. TAIR 10
Match: AT1G13635.1 (DNA glycosylase superfamily protein )

HSP 1 Score: 386.3 bits (991), Expect = 2.2e-107
Identity = 200/306 (65.36%), Postives = 243/306 (79.41%), Query Frame = 0


Query: 8   RRRILERQTCSKEKD-RTSQNILSKHLKKIYPIGLQR-TTSSLSLSSLSLSLSQNSNDSS 67
           R+ I+E+    +EK+ + + N  +KHLK+IYPI LQR T+SS SLSS+SLSLSQNS DS 
Sbjct: 8   RKEIVEKSKSVREKEIKQNSNFFAKHLKRIYPITLQRSTSSSFSLSSISLSLSQNSTDSV 67

Query: 68  LTDSSIHLDQKISYAIRLITPLPPERREAPLPKSVQQQ-CQELGDG-ELRRCNWITHTSD 127
            TDS+  L+QKIS A+ LI+   P RRE  +PKS+ QQ CQ+     E +RCNWIT  SD
Sbjct: 68  STDSNSTLEQKISLALGLIS--SPHRREIFVPKSIPQQLCQDFNSSDEPKRCNWITKKSD 127

Query: 128 KAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRRELFREAFAGFEASTVAN 187
           + YV FHD+ WGVPVYDDN LFE LA+SGMLMDYNWTEI+KR+E FREAF  F+ + VA 
Sbjct: 128 EVYVMFHDQQWGVPVYDDNLLFEFLAMSGMLMDYNWTEILKRKEHFREAFCEFDPNRVAK 187

Query: 188 MGEKEISDIASDKAIMLVESRVRCI---------IARDFGSFSNYMWSYMNFKPTINRFR 247
           MGEKEI++IAS+KAIML ESRVRCI         +  +FGSFS+++W +M++KP IN+F+
Sbjct: 188 MGEKEIAEIASNKAIMLQESRVRCIVDNAKCITKVVNEFGSFSSFVWGFMDYKPIINKFK 247

Query: 248 YPRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTIDHLVDCFRHGECVNLAE 301
           Y RNVPLRSPKAE ISKDM+KRGFRFVGPVIV+SFMQAAGLTIDHLVDCFRHG+CV+LAE
Sbjct: 248 YSRNVPLRSPKAEIISKDMIKRGFRFVGPVIVHSFMQAAGLTIDHLVDCFRHGDCVSLAE 307

[Close]

BLAST of Carg01776-RA vs. TAIR 10
Match: AT1G13635.2 (DNA glycosylase superfamily protein )

HSP 1 Score: 386.3 bits (991), Expect = 2.2e-107
Identity = 200/306 (65.36%), Postives = 243/306 (79.41%), Query Frame = 0


Query: 8   RRRILERQTCSKEKD-RTSQNILSKHLKKIYPIGLQR-TTSSLSLSSLSLSLSQNSNDSS 67
           R+ I+E+    +EK+ + + N  +KHLK+IYPI LQR T+SS SLSS+SLSLSQNS DS 
Sbjct: 8   RKEIVEKSKSVREKEIKQNSNFFAKHLKRIYPITLQRSTSSSFSLSSISLSLSQNSTDSV 67

Query: 68  LTDSSIHLDQKISYAIRLITPLPPERREAPLPKSVQQQ-CQELGDG-ELRRCNWITHTSD 127
            TDS+  L+QKIS A+ LI+   P RRE  +PKS+ QQ CQ+     E +RCNWIT  SD
Sbjct: 68  STDSNSTLEQKISLALGLIS--SPHRREIFVPKSIPQQLCQDFNSSDEPKRCNWITKKSD 127

Query: 128 KAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRRELFREAFAGFEASTVAN 187
           + YV FHD+ WGVPVYDDN LFE LA+SGMLMDYNWTEI+KR+E FREAF  F+ + VA 
Sbjct: 128 EVYVMFHDQQWGVPVYDDNLLFEFLAMSGMLMDYNWTEILKRKEHFREAFCEFDPNRVAK 187

Query: 188 MGEKEISDIASDKAIMLVESRVRCI---------IARDFGSFSNYMWSYMNFKPTINRFR 247
           MGEKEI++IAS+KAIML ESRVRCI         +  +FGSFS+++W +M++KP IN+F+
Sbjct: 188 MGEKEIAEIASNKAIMLQESRVRCIVDNAKCITKVVNEFGSFSSFVWGFMDYKPIINKFK 247

Query: 248 YPRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTIDHLVDCFRHGECVNLAE 301
           Y RNVPLRSPKAE ISKDM+KRGFRFVGPVIV+SFMQAAGLTIDHLVDCFRHG+CV+LAE
Sbjct: 248 YSRNVPLRSPKAEIISKDMIKRGFRFVGPVIVHSFMQAAGLTIDHLVDCFRHGDCVSLAE 307

[Close]

BLAST of Carg01776-RA vs. TAIR 10
Match: AT1G75090.1 (DNA glycosylase superfamily protein )

HSP 1 Score: 203.0 bits (515), Expect = 3.4e-52
Identity = 94/195 (48.21%), Postives = 130/195 (66.67%), Query Frame = 0


Query: 110 GELRRCNWITHTSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRRELF 169
           G ++RC+WIT  SD  YV FHDE WGVPV DD +LFELL  S  L +++W  I++RR+ F
Sbjct: 116 GPVKRCHWITPNSDPIYVLFHDEEWGVPVRDDKKLFELLVFSQALAEFSWPSILRRRDDF 175

Query: 170 REAFAGFEASTVANMGEKEISDIASDKAIMLVESRVRCI---------IARDFGSFSNYM 229
           R+ F  F+ S +A   EK +  +  +  ++L E ++R I         + ++FGSFSNY 
Sbjct: 176 RKLFEEFDPSAIAQFTEKRLMSLRVNGCLILSEQKLRAIVENAKSVLKVKQEFGSFSNYC 235

Query: 230 WSYMNFKPTINRFRYPRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAAGLTIDHL 289
           W ++N KP  N +RY R VP++SPKAE ISKDM++RGFR VGP ++YSF+QA+G+  DHL
Sbjct: 236 WRFVNHKPLRNGYRYGRQVPVKSPKAEYISKDMMQRGFRCVGPTVMYSFLQASGIVNDHL 295

Query: 290 VDCFRHGECVNLAER 296
             CFR+ EC    ER
Sbjct: 296 TACFRYQECNVETER 310

[Close]

BLAST of Carg01776-RA vs. TAIR 10
Match: AT1G80850.1 (DNA glycosylase superfamily protein )

HSP 1 Score: 203.0 bits (515), Expect = 3.4e-52
Identity = 108/261 (41.38%), Postives = 159/261 (60.92%), Query Frame = 0


Query: 48  LSLSSLSLSLSQNSNDSSLTDSSIHLDQKISYAIRLITPLPPERREAPLPKSVQQQCQEL 107
           L  + +S++ S +S+ SS  +SS       S   R++         + L +++ ++  E 
Sbjct: 65  LRRNGISMTASYSSDASSSCESSPLSMTSTSSGKRVLRRSGSVSSSSSLRRNLTEERDEK 124

Query: 108 G-----DGELRRCNWITHTSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEI 167
                 DG  +RC WIT  SD+ Y++FHDE WGVPV+DD RLFELL+LSG L + +W +I
Sbjct: 125 ASDCFCDGR-KRCAWITPKSDQCYIAFHDEEWGVPVHDDKRLFELLSLSGALAELSWKDI 184

Query: 168 VKRRELFREAFAGFEASTVANMGEKEISDIASDKAIMLVESRVR---------CIIARDF 227
           + +R+LFRE F  F+   ++ +  K+I+        +L E ++R         C I   F
Sbjct: 185 LSKRQLFREVFMDFDPIAISELTNKKITSPEIAATTLLSEQKLRSILENANQVCKIIGAF 244

Query: 228 GSFSNYMWSYMNFKPTINRFRYPRNVPLRSPKAEAISKDMVKRGFRFVGPVIVYSFMQAA 287
           GSF  Y+W+++N KPT ++FRYPR VP+++ KAE ISKD+V+RGFR V P ++YSFMQ A
Sbjct: 245 GSFDKYIWNFVNQKPTQSQFRYPRQVPVKTSKAELISKDLVRRGFRSVSPTVIYSFMQTA 304

Query: 288 GLTIDHLVDCFRHGECVNLAE 295
           GLT DHL  CFRH +C+   E
Sbjct: 305 GLTNDHLTCCFRHHDCMTKDE 324

[Close]

BLAST of Carg01776-RA vs. TAIR 10
Match: AT5G57970.1 (DNA glycosylase superfamily protein )

HSP 1 Score: 200.3 bits (508), Expect = 2.2e-51
Identity = 111/268 (41.42%), Postives = 158/268 (58.96%), Query Frame = 0


Query: 41  LQRTTSSLSLSSLSLSLSQNSNDSSLTDSSIHLDQKISYAIRLITPLPPERREAPLPKSV 100
           L+R   +L+ S+LSL+ S  S+D+S+   S H        IR  +     +     P+SV
Sbjct: 82  LRRHEQNLN-SNLSLNAS-FSSDASM--DSFHSRASTGRLIRSYSVGSRSKSYPSKPRSV 141

Query: 101 QQQ----CQELGDGELRRCNWITHTSDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMD 160
             +        G    +RC W+T  SD  Y+ FHDE WGVPV+DD RLFELL LSG L +
Sbjct: 142 VSEGALDSPPNGSETKKRCTWVTPNSDPCYIVFHDEEWGVPVHDDKRLFELLVLSGALAE 201

Query: 161 YNWTEIVKRRELFREAFAGFEASTVANMGEKEISDIASDKAIMLVESRVRCII------- 220
           + W  I+ +R+ FRE FA F+ + +  + EK+I    S  + +L + ++R +I       
Sbjct: 202 HTWPTILSKRQAFREVFADFDPNAIVKINEKKIIGPGSPASTLLSDLKLRAVIENARQIL 261

Query: 221 --ARDFGSFSNYMWSYMNFKPTINRFRYPRNVPLRSPKAEAISKDMVKRGFRFVGPVIVY 280
               ++GSF  Y+WS++  K  +++FRY R VP ++PKAE ISKD+V+RGFR VGP +VY
Sbjct: 262 KVIEEYGSFDKYIWSFVKNKAIVSKFRYQRQVPAKTPKAEVISKDLVRRGFRSVGPTVVY 321

Query: 281 SFMQAAGLTIDHLVDCFRHGECVNLAER 296
           SFMQAAG+T DHL  CFR   C+   ER
Sbjct: 322 SFMQAAGITNDHLTSCFRFHHCIFEHER 345

The following BLAST results are available for this feature:

BLAST of Carg01776-RA vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7032142.1	3.5e-168	100.00	guaA [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6601358.1	7.4e-166	97.09	hypothetical protein SDJN03_06591, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022956507.1	4.0e-164	96.44	uncharacterized protein LOC111458228 [Cucurbita moschata] >XP_022956508.1 unchar...	[more]
XP_022993235.1	1.1e-161	95.48	uncharacterized protein LOC111489316 [Cucurbita maxima] >XP_022993244.1 uncharac...	[more]
XP_023528370.1	4.2e-161	94.55	uncharacterized protein LOC111791309 [Cucurbita pepo subsp. pepo] >XP_023528377....	[more]

BLAST of Carg01776-RA vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7VG78	1.1e-34	35.78	Probable GMP synthase [glutamine-hydrolyzing] OS=Helicobacter hepaticus (strain ...	[more]
P05100	8.0e-30	33.70	DNA-3-methyladenine glycosylase 1 OS=Escherichia coli (strain K12) OX=83333 GN=t...	[more]
P44321	7.5e-28	34.08	DNA-3-methyladenine glycosylase OS=Haemophilus influenzae (strain ATCC 51907 / D...	[more]

BLAST of Carg01776-RA vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GX19	2.0e-164	96.44	uncharacterized protein LOC111458228 OS=Cucurbita moschata OX=3662 GN=LOC1114582...	[more]
A0A6J1JY14	5.3e-162	95.48	uncharacterized protein LOC111489316 OS=Cucurbita maxima OX=3661 GN=LOC111489316...	[more]
A0A0A0KUC5	3.4e-156	91.59	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G606920 PE=4 SV=1	[more]
A0A5D3CCU6	2.2e-155	91.91	DNA-3-methyladenine glycosylase 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3BEN5	2.2e-155	91.91	DNA-3-methyladenine glycosylase 1 OS=Cucumis melo OX=3656 GN=LOC103489204 PE=4 S...	[more]

BLAST of Carg01776-RA vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G13635.1	2.2e-107	65.36	DNA glycosylase superfamily protein	[more]
AT1G13635.2	2.2e-107	65.36	DNA glycosylase superfamily protein	[more]
AT1G75090.1	3.4e-52	48.21	DNA glycosylase superfamily protein	[more]
AT1G80850.1	3.4e-52	41.38	DNA glycosylase superfamily protein	[more]
AT5G57970.1	2.2e-51	41.42	DNA glycosylase superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.340.30	Hypothetical protein; domain 2	coord: 112..287 e-value: 1.1E-61 score: 209.6
None	No IPR available	PANTHER	PTHR31116	OS04G0501200 PROTEIN	coord: 3..300
None	No IPR available	PANTHER	PTHR31116:SF29	DNA GLYCOSYLASE SUPERFAMILY PROTEIN	coord: 3..300
IPR005019	Methyladenine glycosylase	PFAM	PF03352	Adenine_glyco	coord: 121..286 e-value: 5.3E-54 score: 182.7
IPR011257	DNA glycosylase	SUPERFAMILY	48150	DNA-glycosylase	coord: 113..290

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg01776	Carg01776	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg01776-RA:1	Carg01776-RA:1	exon
Carg01776-RA:2	Carg01776-RA:2	exon
Carg01776-RA:3	Carg01776-RA:3	exon
Carg01776-RA:4	Carg01776-RA:4	exon
Carg01776-RA:5	Carg01776-RA:5	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg01776-RA:five_prime_utr	Carg01776-RA:five_prime_utr	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg01776-RA:cds	Carg01776-RA:cds	CDS
Carg01776-RA:cds	Carg01776-RA:cds_2	CDS
Carg01776-RA:cds	Carg01776-RA:cds_3	CDS
Carg01776-RA:cds	Carg01776-RA:cds_4	CDS
Carg01776-RA:cds	Carg01776-RA:cds_5	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg01776-RA:three_prime_utr	Carg01776-RA:three_prime_utr	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg01776-RA	Carg01776-RA-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006284	base-excision repair
biological_process	GO:0006281	DNA repair
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0008725	DNA-3-methyladenine glycosylase activity