Carg01234-RA (mRNA) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg01234-RA
Type	mRNA
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Protein of unknown function, DUF599
Location	Carg_Chr06: 477019 .. 477768 (-)
Sequence length	750
RNA-Seq Expression	Carg01234-RA
Synteny	Carg01234-RA

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACAAAAAGCTTCTGGACTACACATTGGTCTCCTCCGGCCTTCTTCTCATGCTCACCTACCACATTTGGCTTTTACATCGCATCCTCACATATCCCAATAAGACCGTGATCGGCATCAACGCCATGAATCGTCGCTTATGGGTTCAGGCTATGATGGACAATGCACCAAACAACGGCGTCCTTGCCGTCCAAACACTAAGGAACAATATAATGGCGTCGACCCTTTTGGCCTCGACTGCCATAATGCTCTGCTCTCTCATTGCGGTCCTGATGACGAGTGGCGGTGGCGGTGGCAGCGGCCAGAGTCAGTCCCCATTGGCGGTGCTTGGAGACAGAAGCCAATTTAGTTTCTCATTCTCTGTCAAGTTCTTTGCCATATTGGTTTGCTTTTTGGTGGCGTTTTTGTTTAACGTTCAGTCTATAAGGTACTATAGCCATGCAAGCATTCTTATCAATACGCCATGCAGAAAGGGTTTGATCGATGATCGGCATCAGCGTGGGCTCACGGCGGATTATGTGGCCACTACGGTGAATAGAGGGAGTTATTTTTGGTCGTTGGGATTGCGTGCGTTTTACTTTTCATTTCCTTTGTTGTTGTGGATCTTTGGAGCTATTCCTATGTTTTTGTCTTCGGTTCTTCTTGTTTTTATGCTCTATTTTCTTGATGTTTCGTTTGAGTTTTGTTGTGCTGAAGGGAATTCGGCGTACCTCCCTCAAAGGGATGAGGAAGAGGAGATTGGGAAATAG

mRNA sequence

ATGGACAAAAAGCTTCTGGACTACACATTGGTCTCCTCCGGCCTTCTTCTCATGCTCACCTACCACATTTGGCTTTTACATCGCATCCTCACATATCCCAATAAGACCGTGATCGGCATCAACGCCATGAATCGTCGCTTATGGGTTCAGGCTATGATGGACAATGCACCAAACAACGGCGTCCTTGCCGTCCAAACACTAAGGAACAATATAATGGCGTCGACCCTTTTGGCCTCGACTGCCATAATGCTCTGCTCTCTCATTGCGGTCCTGATGACGAGTGGCGGTGGCGGTGGCAGCGGCCAGAGTCAGTCCCCATTGGCGGTGCTTGGAGACAGAAGCCAATTTAGTTTCTCATTCTCTGTCAAGTTCTTTGCCATATTGGTTTGCTTTTTGGTGGCGTTTTTGTTTAACGTTCAGTCTATAAGGTACTATAGCCATGCAAGCATTCTTATCAATACGCCATGCAGAAAGGGTTTGATCGATGATCGGCATCAGCGTGGGCTCACGGCGGATTATGTGGCCACTACGGTGAATAGAGGGAGTTATTTTTGGTCGTTGGGATTGCGTGCGTTTTACTTTTCATTTCCTTTGTTGTTGTGGATCTTTGGAGCTATTCCTATGTTTTTGTCTTCGGTTCTTCTTGTTTTTATGCTCTATTTTCTTGATGTTTCGTTTGAGTTTTGTTGTGCTGAAGGGAATTCGGCGTACCTCCCTCAAAGGGATGAGGAAGAGGAGATTGGGAAATAG

Coding sequence (CDS)

ATGGACAAAAAGCTTCTGGACTACACATTGGTCTCCTCCGGCCTTCTTCTCATGCTCACCTACCACATTTGGCTTTTACATCGCATCCTCACATATCCCAATAAGACCGTGATCGGCATCAACGCCATGAATCGTCGCTTATGGGTTCAGGCTATGATGGACAATGCACCAAACAACGGCGTCCTTGCCGTCCAAACACTAAGGAACAATATAATGGCGTCGACCCTTTTGGCCTCGACTGCCATAATGCTCTGCTCTCTCATTGCGGTCCTGATGACGAGTGGCGGTGGCGGTGGCAGCGGCCAGAGTCAGTCCCCATTGGCGGTGCTTGGAGACAGAAGCCAATTTAGTTTCTCATTCTCTGTCAAGTTCTTTGCCATATTGGTTTGCTTTTTGGTGGCGTTTTTGTTTAACGTTCAGTCTATAAGGTACTATAGCCATGCAAGCATTCTTATCAATACGCCATGCAGAAAGGGTTTGATCGATGATCGGCATCAGCGTGGGCTCACGGCGGATTATGTGGCCACTACGGTGAATAGAGGGAGTTATTTTTGGTCGTTGGGATTGCGTGCGTTTTACTTTTCATTTCCTTTGTTGTTGTGGATCTTTGGAGCTATTCCTATGTTTTTGTCTTCGGTTCTTCTTGTTTTTATGCTCTATTTTCTTGATGTTTCGTTTGAGTTTTGTTGTGCTGAAGGGAATTCGGCGTACCTCCCTCAAAGGGATGAGGAAGAGGAGATTGGGAAATAG

Protein sequence

MDKKLLDYTLVSSGLLLMLTYHIWLLHRILTYPNKTVIGINAMNRRLWVQAMMDNAPNNGVLAVQTLRNNIMASTLLASTAIMLCSLIAVLMTSGGGGGSGQSQSPLAVLGDRSQFSFSFSVKFFAILVCFLVAFLFNVQSIRYYSHASILINTPCRKGLIDDRHQRGLTADYVATTVNRGSYFWSLGLRAFYFSFPLLLWIFGAIPMFLSSVLLVFMLYFLDVSFEFCCAEGNSAYLPQRDEEEEIGK

Homology

[Close]

BLAST of Carg01234-RA vs. NCBI nr
Match: XP_022928231.1 (uncharacterized protein LOC111435095 [Cucurbita moschata] >XP_022971614.1 uncharacterized protein LOC111470289 [Cucurbita maxima] >XP_023539562.1 uncharacterized protein LOC111800202 [Cucurbita pepo subsp. pepo] >KAG6596228.1 hypothetical protein SDJN03_09408, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027771.1 hypothetical protein SDJN02_08948, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 479.6 bits (1233), Expect = 1.7e-131
Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 0


Query: 1   MDKKLLDYTLVSSGLLLMLTYHIWLLHRILTYPNKTVIGINAMNRRLWVQAMMDNAPNNG 60
           MDKKLLDYTLVSSGLLLMLTYHIWLLHRILTYPNKTVIGINAMNRRLWVQAMMDNAPNNG
Sbjct: 1   MDKKLLDYTLVSSGLLLMLTYHIWLLHRILTYPNKTVIGINAMNRRLWVQAMMDNAPNNG 60

Query: 61  VLAVQTLRNNIMASTLLASTAIMLCSLIAVLMTSGGGGGSGQSQSPLAVLGDRSQFSFSF 120
           VLAVQTLRNNIMASTLLASTAIMLCSLIAVLMTSGGGGGSGQSQSPLAVLGDRSQFSFSF
Sbjct: 61  VLAVQTLRNNIMASTLLASTAIMLCSLIAVLMTSGGGGGSGQSQSPLAVLGDRSQFSFSF 120

Query: 121 SVKFFAILVCFLVAFLFNVQSIRYYSHASILINTPCRKGLIDDRHQRGLTADYVATTVNR 180
           SVKFFAILVCFLVAFLFNVQSIRYYSHASILINTPCRKGLIDDRHQRGLTADYVATTVNR
Sbjct: 121 SVKFFAILVCFLVAFLFNVQSIRYYSHASILINTPCRKGLIDDRHQRGLTADYVATTVNR 180

Query: 181 GSYFWSLGLRAFYFSFPLLLWIFGAIPMFLSSVLLVFMLYFLDVSFEFCCAEGNSAYLPQ 240
           GSYFWSLGLRAFYFSFPLLLWIFGAIPMFLSSVLLVFMLYFLDVSFEFCCAEGNSAYLPQ
Sbjct: 181 GSYFWSLGLRAFYFSFPLLLWIFGAIPMFLSSVLLVFMLYFLDVSFEFCCAEGNSAYLPQ 240

Query: 241 RDEEEEIGK 250
           RDEEEEIGK
Sbjct: 241 RDEEEEIGK 249

[Close]

BLAST of Carg01234-RA vs. NCBI nr
Match: XP_038905722.1 (uncharacterized protein LOC120091682 [Benincasa hispida])

HSP 1 Score: 367.1 bits (941), Expect = 1.2e-97
Identity = 198/249 (79.52%), Postives = 217/249 (87.15%), Query Frame = 0


Query: 1   MDKKLLDYTLVSSGLLLMLTYHIWLLHRILTYPNKTVIGINAMNRRLWVQAMMDNAPNNG 60
           M+KK++DY LVSSG+ +M+ YHIWL +RI+T+PNKTVIGINA+NRR WV+AMM++A  NG
Sbjct: 1   MEKKIVDYILVSSGVGVMVGYHIWLFYRIITHPNKTVIGINAINRRFWVRAMMEDASKNG 60

Query: 61  VLAVQTLRNNIMASTLLASTAIMLCSLIAVLMTSGGGGGSGQSQSPLAVLGDRSQFSFSF 120
           VLAVQTLRNNIMASTLLASTAIMLCSLIAVLMTSGG G     +SPL VLGD SQ  FSF
Sbjct: 61  VLAVQTLRNNIMASTLLASTAIMLCSLIAVLMTSGGHG-----ESPLVVLGDTSQ--FSF 120

Query: 121 SVKFFAILVCFLVAFLFNVQSIRYYSHASILINTPCRKGLIDDRHQRGLTADYVATTVNR 180
           S+KFFAIL+CFLVAFLFNVQSIRYYSHASILINTP +K  IDD HQR LTA+YVA TVNR
Sbjct: 121 SIKFFAILLCFLVAFLFNVQSIRYYSHASILINTPFKKIAIDDHHQR-LTAEYVAATVNR 180

Query: 181 GSYFWSLGLRAFYFSFPLLLWIFGAIPMFLSSVLLVFMLYFLDVSFEFCCAEGNSAYLPQ 240
           GSYFWSLGLRAFYFSFPL LWIFG IPMF SS LLVFMLYFLD +FEFC  EGN  YLPQ
Sbjct: 181 GSYFWSLGLRAFYFSFPLFLWIFGPIPMFSSSFLLVFMLYFLDATFEFCWTEGNLDYLPQ 240

Query: 241 RDEEEEIGK 250
           RDEEEEIGK
Sbjct: 241 RDEEEEIGK 241

[Close]

BLAST of Carg01234-RA vs. NCBI nr
Match: XP_022136140.1 (uncharacterized protein LOC111007906 isoform X1 [Momordica charantia])

HSP 1 Score: 361.7 bits (927), Expect = 5.1e-96
Identity = 194/249 (77.91%), Postives = 215/249 (86.35%), Query Frame = 0


Query: 1   MDKKLLDYTLVSSGLLLMLTYHIWLLHRILTYPNKTVIGINAMNRRLWVQAMMDNAPNNG 60
           M+KK++DY LVSSG ++M+ YH WLLHRI+T+PNKTVIGINA+NRRLWV+AMM++A  NG
Sbjct: 1   MEKKIVDYILVSSGFVVMVGYHTWLLHRIITHPNKTVIGINAINRRLWVRAMMEDASKNG 60

Query: 61  VLAVQTLRNNIMASTLLASTAIMLCSLIAVLMTSGGGGGSGQSQSPLAVLGDRSQFSFSF 120
           VLAVQTLRNNIMASTLLASTAIMLCSLIAVLMTSGGG      QSP+ V  ++SQ  F F
Sbjct: 61  VLAVQTLRNNIMASTLLASTAIMLCSLIAVLMTSGGG---RNDQSPMVVFANKSQ--FDF 120

Query: 121 SVKFFAILVCFLVAFLFNVQSIRYYSHASILINTPCRKGLIDDRHQRGLTADYVATTVNR 180
           S+KFFAILVCFLVAFLFNVQSIRYYSHASILINTP RK   D  HQR L+A+YVATTVNR
Sbjct: 121 SIKFFAILVCFLVAFLFNVQSIRYYSHASILINTPFRKISSDHHHQR-LSAEYVATTVNR 180

Query: 181 GSYFWSLGLRAFYFSFPLLLWIFGAIPMFLSSVLLVFMLYFLDVSFEFCCAEGNSAYLPQ 240
           GSYFWSLGLRAFYFSFPL LWIFG +PMF SS LLVFMLYFLDV+FEFC  +GN  YLP 
Sbjct: 181 GSYFWSLGLRAFYFSFPLFLWIFGPVPMFSSSFLLVFMLYFLDVAFEFCGVDGNLDYLPP 240

Query: 241 RDEEEEIGK 250
           RDEEEEIGK
Sbjct: 241 RDEEEEIGK 243

[Close]

BLAST of Carg01234-RA vs. NCBI nr
Match: XP_023552495.1 (uncharacterized protein LOC111810141 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 357.8 bits (917), Expect = 7.4e-95
Identity = 193/249 (77.51%), Postives = 216/249 (86.75%), Query Frame = 0


Query: 1   MDKKLLDYTLVSSGLLLMLTYHIWLLHRILTYPNKTVIGINAMNRRLWVQAMMDNAPNNG 60
           M+KK+ DY LVSSGL +M+ YH+WL +RI+ +PNKTVIGINA+NRRLWV+AMM++A  NG
Sbjct: 1   MEKKISDYILVSSGLGVMVAYHVWLFYRIVRHPNKTVIGINAINRRLWVRAMMEDASKNG 60

Query: 61  VLAVQTLRNNIMASTLLASTAIMLCSLIAVLMTSGGGGGSGQSQSPLAVLGDRSQFSFSF 120
           VLAVQTLRNNIMASTLLASTAIMLCSL+AVL+TSG     G S+SPL VLGD+S   F F
Sbjct: 61  VLAVQTLRNNIMASTLLASTAIMLCSLMAVLVTSG-----GHSESPLVVLGDKS--VFGF 120

Query: 121 SVKFFAILVCFLVAFLFNVQSIRYYSHASILINTPCRKGLIDDRHQRGLTADYVATTVNR 180
           S+KFFAILVCFLVAFLFNVQSIRYYSHASILINTP  K +    H R LTA+YVATTVNR
Sbjct: 121 SIKFFAILVCFLVAFLFNVQSIRYYSHASILINTPF-KNISTHAHHRRLTAEYVATTVNR 180

Query: 181 GSYFWSLGLRAFYFSFPLLLWIFGAIPMFLSSVLLVFMLYFLDVSFEFCCAEGNSAYLPQ 240
           GSYFWSLGLRAFYFSFPLLLWIFG IPMF SS+LLVFMLYFLDV+FEFC A+GN  Y+PQ
Sbjct: 181 GSYFWSLGLRAFYFSFPLLLWIFGPIPMFSSSLLLVFMLYFLDVAFEFCWADGNLDYVPQ 240

Query: 241 RDEEEEIGK 250
           RDEEEEIGK
Sbjct: 241 RDEEEEIGK 241

[Close]

BLAST of Carg01234-RA vs. NCBI nr
Match: XP_022922850.1 (uncharacterized protein LOC111430707 isoform X1 [Cucurbita moschata])

HSP 1 Score: 357.5 bits (916), Expect = 9.6e-95
Identity = 193/249 (77.51%), Postives = 215/249 (86.35%), Query Frame = 0


Query: 1   MDKKLLDYTLVSSGLLLMLTYHIWLLHRILTYPNKTVIGINAMNRRLWVQAMMDNAPNNG 60
           M+KK+ DY LVSSGL +M+ YH+WL +RI+ +PNKTVIGINA+NRRLWV+AMM++A  NG
Sbjct: 1   MEKKISDYILVSSGLGVMVAYHVWLFYRIVRHPNKTVIGINAINRRLWVRAMMEDASKNG 60

Query: 61  VLAVQTLRNNIMASTLLASTAIMLCSLIAVLMTSGGGGGSGQSQSPLAVLGDRSQFSFSF 120
           VLAVQTLRNNIMASTLLASTAIMLCSL+AVL+TSG     G S+SPL VLGD+S   F F
Sbjct: 61  VLAVQTLRNNIMASTLLASTAIMLCSLMAVLVTSG-----GHSESPLVVLGDKS--VFGF 120

Query: 121 SVKFFAILVCFLVAFLFNVQSIRYYSHASILINTPCRKGLIDDRHQRGLTADYVATTVNR 180
           S+KFFAILVCFLVAFLFNVQSIRYYSHASILINTP  K +    H R LTADYVATTVNR
Sbjct: 121 SIKFFAILVCFLVAFLFNVQSIRYYSHASILINTPF-KNISTHAHHRRLTADYVATTVNR 180

Query: 181 GSYFWSLGLRAFYFSFPLLLWIFGAIPMFLSSVLLVFMLYFLDVSFEFCCAEGNSAYLPQ 240
           GSYFWSLGLRAFYFSFPLLLWIFG IPMF SS LLVF+LYFLDV+FEFC A+GN  Y+PQ
Sbjct: 181 GSYFWSLGLRAFYFSFPLLLWIFGPIPMFSSSFLLVFLLYFLDVAFEFCWADGNLDYVPQ 240

Query: 241 RDEEEEIGK 250
           RDEEEEIGK
Sbjct: 241 RDEEEEIGK 241

[Close]

BLAST of Carg01234-RA vs. ExPASy TrEMBL
Match: A0A6J1I930 (uncharacterized protein LOC111470289 OS=Cucurbita maxima OX=3661 GN=LOC111470289 PE=4 SV=1)

HSP 1 Score: 479.6 bits (1233), Expect = 8.1e-132
Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 0


Query: 1   MDKKLLDYTLVSSGLLLMLTYHIWLLHRILTYPNKTVIGINAMNRRLWVQAMMDNAPNNG 60
           MDKKLLDYTLVSSGLLLMLTYHIWLLHRILTYPNKTVIGINAMNRRLWVQAMMDNAPNNG
Sbjct: 1   MDKKLLDYTLVSSGLLLMLTYHIWLLHRILTYPNKTVIGINAMNRRLWVQAMMDNAPNNG 60

Query: 61  VLAVQTLRNNIMASTLLASTAIMLCSLIAVLMTSGGGGGSGQSQSPLAVLGDRSQFSFSF 120
           VLAVQTLRNNIMASTLLASTAIMLCSLIAVLMTSGGGGGSGQSQSPLAVLGDRSQFSFSF
Sbjct: 61  VLAVQTLRNNIMASTLLASTAIMLCSLIAVLMTSGGGGGSGQSQSPLAVLGDRSQFSFSF 120

Query: 121 SVKFFAILVCFLVAFLFNVQSIRYYSHASILINTPCRKGLIDDRHQRGLTADYVATTVNR 180
           SVKFFAILVCFLVAFLFNVQSIRYYSHASILINTPCRKGLIDDRHQRGLTADYVATTVNR
Sbjct: 121 SVKFFAILVCFLVAFLFNVQSIRYYSHASILINTPCRKGLIDDRHQRGLTADYVATTVNR 180

Query: 181 GSYFWSLGLRAFYFSFPLLLWIFGAIPMFLSSVLLVFMLYFLDVSFEFCCAEGNSAYLPQ 240
           GSYFWSLGLRAFYFSFPLLLWIFGAIPMFLSSVLLVFMLYFLDVSFEFCCAEGNSAYLPQ
Sbjct: 181 GSYFWSLGLRAFYFSFPLLLWIFGAIPMFLSSVLLVFMLYFLDVSFEFCCAEGNSAYLPQ 240

Query: 241 RDEEEEIGK 250
           RDEEEEIGK
Sbjct: 241 RDEEEEIGK 249

[Close]

BLAST of Carg01234-RA vs. ExPASy TrEMBL
Match: A0A6J1EJQ9 (uncharacterized protein LOC111435095 OS=Cucurbita moschata OX=3662 GN=LOC111435095 PE=4 SV=1)

HSP 1 Score: 479.6 bits (1233), Expect = 8.1e-132
Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 0


Query: 1   MDKKLLDYTLVSSGLLLMLTYHIWLLHRILTYPNKTVIGINAMNRRLWVQAMMDNAPNNG 60
           MDKKLLDYTLVSSGLLLMLTYHIWLLHRILTYPNKTVIGINAMNRRLWVQAMMDNAPNNG
Sbjct: 1   MDKKLLDYTLVSSGLLLMLTYHIWLLHRILTYPNKTVIGINAMNRRLWVQAMMDNAPNNG 60

Query: 61  VLAVQTLRNNIMASTLLASTAIMLCSLIAVLMTSGGGGGSGQSQSPLAVLGDRSQFSFSF 120
           VLAVQTLRNNIMASTLLASTAIMLCSLIAVLMTSGGGGGSGQSQSPLAVLGDRSQFSFSF
Sbjct: 61  VLAVQTLRNNIMASTLLASTAIMLCSLIAVLMTSGGGGGSGQSQSPLAVLGDRSQFSFSF 120

Query: 121 SVKFFAILVCFLVAFLFNVQSIRYYSHASILINTPCRKGLIDDRHQRGLTADYVATTVNR 180
           SVKFFAILVCFLVAFLFNVQSIRYYSHASILINTPCRKGLIDDRHQRGLTADYVATTVNR
Sbjct: 121 SVKFFAILVCFLVAFLFNVQSIRYYSHASILINTPCRKGLIDDRHQRGLTADYVATTVNR 180

Query: 181 GSYFWSLGLRAFYFSFPLLLWIFGAIPMFLSSVLLVFMLYFLDVSFEFCCAEGNSAYLPQ 240
           GSYFWSLGLRAFYFSFPLLLWIFGAIPMFLSSVLLVFMLYFLDVSFEFCCAEGNSAYLPQ
Sbjct: 181 GSYFWSLGLRAFYFSFPLLLWIFGAIPMFLSSVLLVFMLYFLDVSFEFCCAEGNSAYLPQ 240

Query: 241 RDEEEEIGK 250
           RDEEEEIGK
Sbjct: 241 RDEEEEIGK 249

[Close]

BLAST of Carg01234-RA vs. ExPASy TrEMBL
Match: A0A6J1C319 (uncharacterized protein LOC111007906 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111007906 PE=4 SV=1)

HSP 1 Score: 361.7 bits (927), Expect = 2.5e-96
Identity = 194/249 (77.91%), Postives = 215/249 (86.35%), Query Frame = 0


Query: 1   MDKKLLDYTLVSSGLLLMLTYHIWLLHRILTYPNKTVIGINAMNRRLWVQAMMDNAPNNG 60
           M+KK++DY LVSSG ++M+ YH WLLHRI+T+PNKTVIGINA+NRRLWV+AMM++A  NG
Sbjct: 1   MEKKIVDYILVSSGFVVMVGYHTWLLHRIITHPNKTVIGINAINRRLWVRAMMEDASKNG 60

Query: 61  VLAVQTLRNNIMASTLLASTAIMLCSLIAVLMTSGGGGGSGQSQSPLAVLGDRSQFSFSF 120
           VLAVQTLRNNIMASTLLASTAIMLCSLIAVLMTSGGG      QSP+ V  ++SQ  F F
Sbjct: 61  VLAVQTLRNNIMASTLLASTAIMLCSLIAVLMTSGGG---RNDQSPMVVFANKSQ--FDF 120

Query: 121 SVKFFAILVCFLVAFLFNVQSIRYYSHASILINTPCRKGLIDDRHQRGLTADYVATTVNR 180
           S+KFFAILVCFLVAFLFNVQSIRYYSHASILINTP RK   D  HQR L+A+YVATTVNR
Sbjct: 121 SIKFFAILVCFLVAFLFNVQSIRYYSHASILINTPFRKISSDHHHQR-LSAEYVATTVNR 180

Query: 181 GSYFWSLGLRAFYFSFPLLLWIFGAIPMFLSSVLLVFMLYFLDVSFEFCCAEGNSAYLPQ 240
           GSYFWSLGLRAFYFSFPL LWIFG +PMF SS LLVFMLYFLDV+FEFC  +GN  YLP 
Sbjct: 181 GSYFWSLGLRAFYFSFPLFLWIFGPVPMFSSSFLLVFMLYFLDVAFEFCGVDGNLDYLPP 240

Query: 241 RDEEEEIGK 250
           RDEEEEIGK
Sbjct: 241 RDEEEEIGK 243

[Close]

BLAST of Carg01234-RA vs. ExPASy TrEMBL
Match: A0A6J1E9Z4 (uncharacterized protein LOC111430707 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430707 PE=4 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 4.7e-95
Identity = 193/249 (77.51%), Postives = 215/249 (86.35%), Query Frame = 0


Query: 1   MDKKLLDYTLVSSGLLLMLTYHIWLLHRILTYPNKTVIGINAMNRRLWVQAMMDNAPNNG 60
           M+KK+ DY LVSSGL +M+ YH+WL +RI+ +PNKTVIGINA+NRRLWV+AMM++A  NG
Sbjct: 1   MEKKISDYILVSSGLGVMVAYHVWLFYRIVRHPNKTVIGINAINRRLWVRAMMEDASKNG 60

Query: 61  VLAVQTLRNNIMASTLLASTAIMLCSLIAVLMTSGGGGGSGQSQSPLAVLGDRSQFSFSF 120
           VLAVQTLRNNIMASTLLASTAIMLCSL+AVL+TSG     G S+SPL VLGD+S   F F
Sbjct: 61  VLAVQTLRNNIMASTLLASTAIMLCSLMAVLVTSG-----GHSESPLVVLGDKS--VFGF 120

Query: 121 SVKFFAILVCFLVAFLFNVQSIRYYSHASILINTPCRKGLIDDRHQRGLTADYVATTVNR 180
           S+KFFAILVCFLVAFLFNVQSIRYYSHASILINTP  K +    H R LTADYVATTVNR
Sbjct: 121 SIKFFAILVCFLVAFLFNVQSIRYYSHASILINTPF-KNISTHAHHRRLTADYVATTVNR 180

Query: 181 GSYFWSLGLRAFYFSFPLLLWIFGAIPMFLSSVLLVFMLYFLDVSFEFCCAEGNSAYLPQ 240
           GSYFWSLGLRAFYFSFPLLLWIFG IPMF SS LLVF+LYFLDV+FEFC A+GN  Y+PQ
Sbjct: 181 GSYFWSLGLRAFYFSFPLLLWIFGPIPMFSSSFLLVFLLYFLDVAFEFCWADGNLDYVPQ 240

Query: 241 RDEEEEIGK 250
           RDEEEEIGK
Sbjct: 241 RDEEEEIGK 241

[Close]

BLAST of Carg01234-RA vs. ExPASy TrEMBL
Match: A0A6J1JC80 (uncharacterized protein LOC111483144 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111483144 PE=4 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 1.0e-94
Identity = 192/249 (77.11%), Postives = 215/249 (86.35%), Query Frame = 0


Query: 1   MDKKLLDYTLVSSGLLLMLTYHIWLLHRILTYPNKTVIGINAMNRRLWVQAMMDNAPNNG 60
           M+KK+ DY LVSSGL +M+ YH+WL +RI+ +PNKTVIGINA+NRRLWV+AMM++A  NG
Sbjct: 1   MEKKISDYILVSSGLGVMVAYHVWLFYRIVRHPNKTVIGINAINRRLWVRAMMEDASKNG 60

Query: 61  VLAVQTLRNNIMASTLLASTAIMLCSLIAVLMTSGGGGGSGQSQSPLAVLGDRSQFSFSF 120
           +LAVQTLRNNIMASTLLASTAIMLCSL+AVL+TSG     G S+SPL VLGD+S   F F
Sbjct: 61  ILAVQTLRNNIMASTLLASTAIMLCSLMAVLVTSG-----GHSESPLVVLGDKS--VFGF 120

Query: 121 SVKFFAILVCFLVAFLFNVQSIRYYSHASILINTPCRKGLIDDRHQRGLTADYVATTVNR 180
           S+KFFAILVCFLVAFLFNVQSIRYYSHASILINTP  K +    H R LTA+YVATTVNR
Sbjct: 121 SIKFFAILVCFLVAFLFNVQSIRYYSHASILINTPF-KNVSTHAHHRRLTAEYVATTVNR 180

Query: 181 GSYFWSLGLRAFYFSFPLLLWIFGAIPMFLSSVLLVFMLYFLDVSFEFCCAEGNSAYLPQ 240
           GSYFWSLGLRAFYFSFPLLLWIFG IPMF SS LLVFMLYFLDV+FEFC A+GN  Y+PQ
Sbjct: 181 GSYFWSLGLRAFYFSFPLLLWIFGPIPMFSSSCLLVFMLYFLDVAFEFCWADGNLDYVPQ 240

Query: 241 RDEEEEIGK 250
           RDEEEEIGK
Sbjct: 241 RDEEEEIGK 241

[Close]

BLAST of Carg01234-RA vs. TAIR 10
Match: AT5G24600.1 (Protein of unknown function, DUF599 )

HSP 1 Score: 269.2 bits (687), Expect = 3.2e-72
Identity = 153/232 (65.95%), Postives = 179/232 (77.16%), Query Frame = 0


Query: 1   MDKKLLDYTLVSSGLLLMLTYHIWLLHRILTYPNKTVIGINAMNRRLWVQAMMDNAPNNG 60
           M ++ LDYTLV  GL LM+ YH+WLL+RI+  P+ TV+G+NA NRRLWVQAMM+++  NG
Sbjct: 1   MKREYLDYTLVPLGLALMVFYHLWLLYRIIHRPSSTVVGLNAFNRRLWVQAMMEDSSKNG 60

Query: 61  VLAVQTLRNNIMASTLLASTAIMLCSLIAVLMTSGGGGGSGQSQSPLAVLGDRSQFSFSF 120
           VLAVQTLRNNIMASTLLASTAIMLCSLIAVLMTS  G      +S   V GD+S    +F
Sbjct: 61  VLAVQTLRNNIMASTLLASTAIMLCSLIAVLMTSATG-----ERSVWFVFGDKS--DRAF 120

Query: 121 SVKFFAILVCFLVAFLFNVQSIRYYSHASILINTPCRKGLIDDRHQRG-----LTADYVA 180
           S+KFFAILVCFLVAFL NVQSIRYYSHASILIN P ++ +      RG     +  DYVA
Sbjct: 121 SLKFFAILVCFLVAFLLNVQSIRYYSHASILINVPFKQLMAVSSGGRGNGSLMINQDYVA 180

Query: 181 TTVNRGSYFWSLGLRAFYFSFPLLLWIFGAIPMFLSSVLLVFMLYFLDVSFE 228
            TVNRGSYFWSLGLRAFYFS PL LWIFG IPMF++  +LV  LYFLD++F+
Sbjct: 181 ATVNRGSYFWSLGLRAFYFSSPLFLWIFGPIPMFITCCVLVCSLYFLDLTFD 225

[Close]

BLAST of Carg01234-RA vs. TAIR 10
Match: AT5G24600.2 (Protein of unknown function, DUF599 )

HSP 1 Score: 266.2 bits (679), Expect = 2.7e-71
Identity = 152/230 (66.09%), Postives = 177/230 (76.96%), Query Frame = 0


Query: 1   MDKKLLDYTLVSSGLLLMLTYHIWLLHRILTYPNKTVIGINAMNRRLWVQAMMDNAPNNG 60
           M ++ LDYTLV  GL LM+ YH+WLL+RI+  P+ TV+G+NA NRRLWVQAMM+++  NG
Sbjct: 1   MKREYLDYTLVPLGLALMVFYHLWLLYRIIHRPSSTVVGLNAFNRRLWVQAMMEDSSKNG 60

Query: 61  VLAVQTLRNNIMASTLLASTAIMLCSLIAVLMTSGGGGGSGQSQSPLAVLGDRSQFSFSF 120
           VLAVQTLRNNIMASTLLASTAIMLCSLIAVLMTS  G      +S   V GD+S    +F
Sbjct: 61  VLAVQTLRNNIMASTLLASTAIMLCSLIAVLMTSATG-----ERSVWFVFGDKS--DRAF 120

Query: 121 SVKFFAILVCFLVAFLFNVQSIRYYSHASILINTPCRKGLIDDRHQRG-----LTADYVA 180
           S+KFFAILVCFLVAFL NVQSIRYYSHASILIN P ++ +      RG     +  DYVA
Sbjct: 121 SLKFFAILVCFLVAFLLNVQSIRYYSHASILINVPFKQLMAVSSGGRGNGSLMINQDYVA 180

Query: 181 TTVNRGSYFWSLGLRAFYFSFPLLLWIFGAIPMFLSSVLLVFMLYFLDVS 226
            TVNRGSYFWSLGLRAFYFS PL LWIFG IPMF++  +LV  LYFLD++
Sbjct: 181 ATVNRGSYFWSLGLRAFYFSSPLFLWIFGPIPMFITCCVLVCSLYFLDLT 223

[Close]

BLAST of Carg01234-RA vs. TAIR 10
Match: AT3G18215.1 (Protein of unknown function, DUF599 )

HSP 1 Score: 200.7 bits (509), Expect = 1.4e-51
Identity = 115/223 (51.57%), Postives = 150/223 (67.26%), Query Frame = 0


Query: 6   LDYTLVSSGLLLMLTYHIWLLHRILTYPNKTVIGINAMNRRLWVQAMMDNAPNNGVLAVQ 65
           LD  LV +GL++M+ YH+WL++ IL  P  TVI +NA +RR WV +MM     NG LAVQ
Sbjct: 7   LDLVLVPTGLVVMVAYHVWLVYAILHRPKLTVIALNAESRRQWVFSMMTEPLKNGTLAVQ 66

Query: 66  TLRNNIMASTLLASTAIMLCSLIAVLMTSGGGGGSGQSQSPLAVLGDRSQFSFSFSVKFF 125
           T+RNNIMASTLLA+TAI LCS+I V +++     S +S +   + G +S    SF  K F
Sbjct: 67  TIRNNIMASTLLATTAITLCSIIGVFVSN---SSSSKSTATNLIYGSKSPRLASF--KNF 126

Query: 126 AILVCFLVAFLFNVQSIRYYSHASILINTPCRKGLIDDRHQRGLTADYVATTVNRGSYFW 185
           AIL+CFL+AFL N+QSIRYY+H S L+  P  +G  +         +YV+  +NR SYFW
Sbjct: 127 AILICFLMAFLCNIQSIRYYAHVSFLVTVPVSRGKREH-------CEYVSRNLNRASYFW 186

Query: 186 SLGLRAFYFSFPLLLWIFGAIPMFLSSVLLVFMLYFLDVSFEF 229
           SLGLRAFYFSFPL LW FG IPMF+   ++  +LYFLD +  F
Sbjct: 187 SLGLRAFYFSFPLFLWTFGPIPMFVCCCMMSSILYFLDTTTSF 217

[Close]

BLAST of Carg01234-RA vs. TAIR 10
Match: AT4G31330.1 (Protein of unknown function, DUF599 )

HSP 1 Score: 136.7 bits (343), Expect = 2.5e-32
Identity = 92/224 (41.07%), Postives = 140/224 (62.50%), Query Frame = 0


Query: 6   LDYTLVSSGLLLMLTYHIWLLHRILTYPNKTVIGINAMNRRLWVQAMMDNAPNNGVLAVQ 65
           LD  LV  GL++  +YH++L H++ T P  T+IG NA  RR WV +++ +     +LAVQ
Sbjct: 8   LDVILVPLGLMVYASYHVYLWHKLRTQPLTTIIGTNARARRFWVASIIKDNDKKNILAVQ 67

Query: 66  TLRNNIMASTLLASTAIMLCSLIAVLMTSGGGGGSGQSQSPL--AVLGDRSQFSFSFSVK 125
           TLRN IM STL+A+T+I+LC+ +A +++S     +   + PL  AV G R +  F  ++K
Sbjct: 68  TLRNCIMGSTLMATTSILLCAGLAAVLSS-----TYAVKKPLNDAVFGARGE--FMVALK 127

Query: 126 FFAILVCFLVAFLFNVQSIRYYSHASILINTPCRKGLIDDRHQRGLTA-DYVATTVNRGS 185
           +  IL  FL +F  +  SIR+ +  +ILINTP     ++D  +  +TA +YVA  + RG 
Sbjct: 128 YVTILTIFLFSFFSHSLSIRFINQVNILINTPFPPEELED--EMMMTAEEYVAELLERGF 187

Query: 186 YFWSLGLRAFYFSFPLLLWIFGAIPMFLSSVLLVFMLYFLDVSF 227
              ++G R FY + PL+LWIFG + +FL SV++V +LY LD  F
Sbjct: 188 ILNTVGNRLFYAALPLMLWIFGPVLVFLCSVVMVPLLYNLDFFF 222

[Close]

BLAST of Carg01234-RA vs. TAIR 10
Match: AT5G46060.1 (Protein of unknown function, DUF599 )

HSP 1 Score: 134.4 bits (337), Expect = 1.2e-31
Identity = 90/224 (40.18%), Postives = 131/224 (58.48%), Query Frame = 0


Query: 3   KKLLDYTLVSSGLLLMLTYHIWLLHRILTYPNKTVIGINAMNRRLWVQAMMDNAPNNGVL 62
           K+ LD  LV  GL+++L+YH++LL+RIL +P  T+IG   +++ +WV  +M    +    
Sbjct: 7   KEYLDLVLVPFGLIIVLSYHLFLLYRILYFPYHTIIGFMNIDKSIWVDRIMQARKDELGG 66

Query: 63  AVQTLRNNIMASTLLASTAIMLCSLIAVLMTSGGGGGSGQSQSPLA---VLGDRSQFSFS 122
           A+  L ++I AST +AS A+ L SLI   +     G S  S +      + GD S  S +
Sbjct: 67  ALTVLSSSISASTFMASIALTLSSLIGAWI-----GSSPVSMTVFTGHFIYGDTS--SIT 126

Query: 123 FSVKFFAILVCFLVAFLFNVQSIRYYSHASILINTPCRKGLIDDRHQRGLTADYVATTVN 182
             +K+ ++L+CFLVAF   +QS R + HA+ LI TP             +  D V   V 
Sbjct: 127 MVIKYTSLLICFLVAFCCFIQSTRCFLHANYLITTP----------GEDIPPDMVKRFVL 186

Query: 183 RGSYFWSLGLRAFYFSFPLLLWIFGAIPMFLSSVLLVFMLYFLD 224
           RG  +WSLGLRA Y +  LLLW+FG +PMF++SVL+V  LYFLD
Sbjct: 187 RGGNYWSLGLRALYLALDLLLWLFGPVPMFINSVLMVICLYFLD 213

The following BLAST results are available for this feature:

BLAST of Carg01234-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022928231.1	1.7e-131	100.00	uncharacterized protein LOC111435095 [Cucurbita moschata] >XP_022971614.1 unchar...	[more]
XP_038905722.1	1.2e-97	79.52	uncharacterized protein LOC120091682 [Benincasa hispida]	[more]
XP_022136140.1	5.1e-96	77.91	uncharacterized protein LOC111007906 isoform X1 [Momordica charantia]	[more]
XP_023552495.1	7.4e-95	77.51	uncharacterized protein LOC111810141 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022922850.1	9.6e-95	77.51	uncharacterized protein LOC111430707 isoform X1 [Cucurbita moschata]	[more]

BLAST of Carg01234-RA vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg01234-RA vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I930	8.1e-132	100.00	uncharacterized protein LOC111470289 OS=Cucurbita maxima OX=3661 GN=LOC111470289...	[more]
A0A6J1EJQ9	8.1e-132	100.00	uncharacterized protein LOC111435095 OS=Cucurbita moschata OX=3662 GN=LOC1114350...	[more]
A0A6J1C319	2.5e-96	77.91	uncharacterized protein LOC111007906 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1E9Z4	4.7e-95	77.51	uncharacterized protein LOC111430707 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1JC80	1.0e-94	77.11	uncharacterized protein LOC111483144 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of Carg01234-RA vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G24600.1	3.2e-72	65.95	Protein of unknown function, DUF599	[more]
AT5G24600.2	2.7e-71	66.09	Protein of unknown function, DUF599	[more]
AT3G18215.1	1.4e-51	51.57	Protein of unknown function, DUF599	[more]
AT4G31330.1	2.5e-32	41.07	Protein of unknown function, DUF599	[more]
AT5G46060.1	1.2e-31	40.18	Protein of unknown function, DUF599	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006747	Protein of unknown function DUF599	PFAM	PF04654	DUF599	coord: 10..226 e-value: 2.5E-77 score: 259.0
None	No IPR available	PANTHER	PTHR31168:SF1	OS02G0292800 PROTEIN	coord: 1..236
None	No IPR available	PANTHER	PTHR31168	OS02G0292800 PROTEIN	coord: 1..236

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg01234	Carg01234	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg01234-RA:1	Carg01234-RA:1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg01234-RA:cds	Carg01234-RA:cds	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg01234-RA	Carg01234-RA-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006468	protein phosphorylation
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004672	protein kinase activity