Carg01209-RA (mRNA) Silver-seed gourd (SMH-JMG-627) v2
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Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTATTTGATGAACTTTTTCATTCAACGAATCGCCGCCGCAGATACAAATCTTCACCATTCGCCGACACAAAAGCGGCAGAGGTGAAGAAAACTCGATCATCGTCATCTTAGGTAAAAAGTAACTTGTTCTTCTTTTTCTCTTTACTTTATTACGATTCTTTCCAGGTTGCTCGAAGTTTTCCCCAAATTTGATCCAATGGCGATGCCATCCCCATCTTTTGCTATGAAGTCAAAAGTTGTGTTAGCTGAATCAAACAGTATTGAACTCTCCTTTTACTTTACTTTTGTGGATTTAAAGAGTAGATTGATAATCGGACACGTATTTCGTTGATATTCCAGAATCTAACAAATCCCAATAGCTAATCGAGTTTCAAACAGGGAATGCCCTTTTTAAGCTCTACAGAATCCTTTCAGCAGATTGTATTCCTTTTTCTTCATTGATTGCTGGAATGAAATCTTCTGCTATATCTCCTTGTGGCCATTATTTGCAATTTTTCCAAGCTTTTTTTGTTCATAATGGGTGTGTGAATTTGAAATATAATAATCGGATAAAATCCACCACCTCCTCTGCCACTTTCAGAAGAAAAAAAGTAATAATAAAAGAGTTTTCCAGCAGATATTGCCTTGAAAAAGTGGGAGGTGACACAAGGAGCAGTATATTTAAAAACCTCCACCCAATTGCACATATTCTCTTCTTGACACCAAAACCAGACCCTTTCTGCAAAAAAATGTATATTATTTTGTAGATGTATTTGATGAACTTTTTCATTCAACGAATCGCCGCCGCAGATACAAATCTTCACCATTCGCCGACACAAAAGCGGCAGAGATATTGCCTTGAAAAAGTGGGAGGTGACACAAGGAGCAGTATATTTAAAAACCTCCACCCAATTGCACATATTCTCTTCTTGACACCAAAACCAGACCCTTTCTGCAAAAAAATGTATATTATTTTGTAG ATGTATTTGATGAACTTTTTCATTCAACGAATCGCCGCCGCAGATACAAATCTTCACCATTCGCCGACACAAAAGCGGCAGAGATATTGCCTTGAAAAAGTGGGAGGTGACACAAGGAGCAGTATATTTAAAAACCTCCACCCAATTGCACATATTCTCTTCTTGACACCAAAACCAGACCCTTTCTGCAAAAAAATGTATATTATTTTGTAG MYLMNFFIQRIAAADTNLHHSPTQKRQRYCLEKVGGDTRSSIFKNLHPIAHILFLTPKPDPFCKKMYIIL Homology
BLAST of Carg01209-RA vs. NCBI nr
Match: KAG7027795.1 (hypothetical protein SDJN02_08972, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 150.6 bits (379), Expect = 5.0e-33 Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 0
BLAST of Carg01209-RA vs. NCBI nr
Match: XP_008448536.1 (PREDICTED: histidine kinase 1 isoform X1 [Cucumis melo]) HSP 1 Score: 62.8 bits (151), Expect = 1.4e-06 Identity = 32/46 (69.57%), Postives = 32/46 (69.57%), Query Frame = 0
BLAST of Carg01209-RA vs. ExPASy TrEMBL
Match: A0A1S3BKS9 (histidine kinase 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490686 PE=4 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 6.7e-07 Identity = 32/46 (69.57%), Postives = 32/46 (69.57%), Query Frame = 0
BLAST of Carg01209-RA vs. ExPASy TrEMBL
Match: A0A6J1HNC3 (histidine kinase 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111465173 PE=4 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 9.0e-04 Identity = 27/41 (65.85%), Postives = 28/41 (68.29%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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