Carg01182-RA (mRNA) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg01182-RA
Type	mRNA
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	WUSCHEL-related homeobox 13
Location	Carg_Chr06: 791500 .. 794514 (-)
Sequence length	1012
RNA-Seq Expression	Carg01182-RA
Synteny	Carg01182-RA

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CACAAATGAAAAACAGCCAAAAGCTGCAGAATTTCCGACATCTTCTTTTTATCTCCGCCGTGATGTCCACCGCCGACCGCCGTACCAGATAGCACAAACTTTCGAATAACACGCTGACTGGGTCGGCGGGTATCCTCAGGGTCAGACAGTGCCAGAGAAAACTCATAGCGATCAGGTCTAGTTCACCGATACTTCCGGTTGCTCTTCCAAACCTCTTTTCTAAGGAAAATTAAATTGTGTTTATTTGCTTTCCATTTTAGGTTCAAATATTTTTCACAAAGGAAAGGAAAAAAAAAAAAAAAAAATCAAATCCAACGTTGAATTTGATAGTGATGCTTTTATTATTAATTTTTCATTGAATTAATTTTTCATTGAATTAATTTTGAAACTATTTAATTTTTAAAAAAATATATTTGATCACCTACTGAAAATTACTATAAAGTGTATTTTTTTTAATGAATTTTTTTCCTGATATTTCTTTTACTTTTCTTATTGTTAACTAATTATTAATTTTAGCATATTTTTTTTCTCCAAATTTTTTATACATATCTTATATATTTAATTAATTATTATTTGTTTGTGGGCTTCCATATATAATATATATATGTATAAATATATGTTTAATTTTTTATTTATTAGTAAAGTAGTTAAAGCTTAAAAAAATGAGAGGAATCTTCTATAATACTCAACCTCTAGCTTTTAAAATAAATTAAAAAATATATATATATATATTATATAATTTTAATCAAATGAGGAAATTTATAATTTAAGAAAAATATATTATTATTTTAATAATCATTTGTCTCTCTTTATTTTCTGGTTAACCGTCCTGTGGTTTGTGAGCCTCCACTCTCATTTTCCCTCTTTTCTCTTTCTATCTCTAGGAATTCAATAGCGAAGCAGAGATTATGATGGATCCTTACCACCACCAGAACCCTCCTCTTCGCGACGATCATCTCCGTTACCTTACCGGAACCACCGCTGGCGCTCTCTACGTCAAAGTCATGACCGACGAGCAATTGGAGACTCTTCGCAAGCAAATTGCTGTTTACGCCACCATTTGCGAGCAGCTTGTTGAGATGCACAAGACTCTTACTGCTCACCAGGATCTCAAAGGTGCTGCAATGCTCTTTTCTTTTACTTCTTCTTTCAATTCAATGGATGAATTAGGCTTATTGCTTTAGTAGCGGCTTCTGTACTGCAGTCTTGTTGGTTGGAGTATTGATTTTTTTTTTTTTTTTTTAATGGATTATTGATTGCCTGCTTTCTTCTCGATCGTTTGTATTGAATTTTGATTGCTGTCTTTCTGTTCAATTTGTATGGTGCAAGCTTTCTTGTTTCTTTTTTCTGCTTTGGAAAAGCGTCTGGCCATTTTGAGCTGTTTGTTACCTCGAAAAAGGGCAAACATCTAATGCTGTAAGACTACTGGTTTCCCCTTTTGTGTTGCTATCCATCTTTTTATGGTCCTTTGGGGCGTGGAAGACTGCCCTGCCGTAAAGCATTTATTTCCCTCCTCTTTCATTGTTTGCAGGATGGTTATCTTAATTATGAGGCGCTTTAATAACCGCCGAGTGATCTACTTTTTGCAAAACAGCAGAAAAATTGTTTGTTTTTTCAACTATTTCTTGAGTATTCCTATGAAGAAGTGAATCTTTTTGATTTATAATTTTGGAAAATCGTCATCACCGTTAATCAAACGGGTGAGAATGAGATATATTTTCTTTAGCAATTGAATGAGGGGTTCAGTATAACTTTTTGTAAGCTGAATAAGCCAGGTGAAAACTCGACAGTTTTGATAATAATATTCATTCATTGTTCTTGGTTTAAGATTGTTGTGGTGATATGGCTTCGACTTGTAGAAACTGGAAACTGCTTTCTGCTCCTGTATGATCTTGGAGACAATCTGATGAGCCTCCTCTATGCACTTGCTTAAAGCTTGTGTCTTGCTGCTTTGCAGGAATGAGGTTGGGTAGTGTGTACTATGAGCCATTGATGGCATCTTCCAGCCACAAAATTACTTCTAGACAGCGATGGACTCCGTCGCCCGTGCAACTTCAGATCTTGGAGCGTATATTTGAGCAAGGGAATGGAACTCCTAGCAAGCAAAAGATCAAAGAGATTACCTCTGAACTGGGTCAACATGGGCAAATTTCTGAATCAAATGTCTATAATTGGTTCCAAAACAGGCGTGCTCGATCAAAGAGGAAGCAGCAGGGTACAGCGCCTACGTATGGTGAATCAGAATTGGAGACAGAAGTCGAGTCGCCGAAAGATAAGAAGACAAAACCTGTGGATTTTCAAACTCCTCAAACCTCTGCACCTTTGGGGGAGGACATGGGCTTCCAGAGTCCTGAGATGCACTATGAACTGCATTTCCTGGATCCAAACACCAACAAAGCTGATACTTTGTTTCCATCAAATGGAAGTTCAAAAACCGCAAGAACTTTTAGTCAGATGTCTTCTTATGAAGGTATGCCGTAAGGGTTTCTTGCCGCTTTTTCATATGATTATTAATCATCTTTTTGCCTGACATAACAAATTTCTTTCTAGTCGTATTATTTGGAGGATTCAGAAAAGTATTGAACTTTCTCATTTGTCAAGTATTTAACTTGCTGATAGGTGAATACACACAAAAACTTGAATTAAAAGTTCAGTTAGAATCCTGTTTTGCCAGGAAAGTCCTAGGTCCTACAGGGTATATACTTTCATAATCACCCTCTTTGTAACTGTTGTGTGTTAATTTTGATAGAACTATGATGACAAGCATGTGCAAGAAAAATGAGTTGCTAACTTGCTACCTCTAAATACGTTAGGAAGATCCTCAATTGATACTGTTTTTTCCTTTGGATATCCATCTCTGTCACACCTCCACACAGAGAATATAGAATTGAGTATCTGCTTTTCTTTGTGAAATTGATTACAGCAGGGAATGAACAGCTGACAGGAAAGATCGAGACACCAGAAAACTATAGTCTTTACTCGCAAGCAGAAGGATGCATGGCCGAACAACCCTGA

mRNA sequence

CACAAATGAAAAACAGCCAAAAGCTGCAGAATTTCCGACATCTTCTTTTTATCTCCGCCGTGATGTCCACCGCCGACCGCCGTACCAGATAGCACAAACTTTCGAATAACACGCTGACTGGGTCGGCGGGTATCCTCAGGGTCAGACAGTGCCAGAGAAAACTCATAGCGATCAGGAATTCAATAGCGAAGCAGAGATTATGATGGATCCTTACCACCACCAGAACCCTCCTCTTCGCGACGATCATCTCCGTTACCTTACCGGAACCACCGCTGGCGCTCTCTACGTCAAAGTCATGACCGACGAGCAATTGGAGACTCTTCGCAAGCAAATTGCTGTTTACGCCACCATTTGCGAGCAGCTTGTTGAGATGCACAAGACTCTTACTGCTCACCAGGATCTCAAAGGAATGAGGTTGGGTAGTGTGTACTATGAGCCATTGATGGCATCTTCCAGCCACAAAATTACTTCTAGACAGCGATGGACTCCGTCGCCCGTGCAACTTCAGATCTTGGAGCGTATATTTGAGCAAGGGAATGGAACTCCTAGCAAGCAAAAGATCAAAGAGATTACCTCTGAACTGGGTCAACATGGGCAAATTTCTGAATCAAATGTCTATAATTGGTTCCAAAACAGGCGTGCTCGATCAAAGAGGAAGCAGCAGGGTACAGCGCCTACGTATGGTGAATCAGAATTGGAGACAGAAGTCGAGTCGCCGAAAGATAAGAAGACAAAACCTGTGGATTTTCAAACTCCTCAAACCTCTGCACCTTTGGGGGAGGACATGGGCTTCCAGAGTCCTGAGATGCACTATGAACTGCATTTCCTGGATCCAAACACCAACAAAGCTGATACTTTGTTTCCATCAAATGGAAGTTCAAAAACCGCAAGAACTTTTAGTCAGATGTCTTCTTATGAAGCAGGGAATGAACAGCTGACAGGAAAGATCGAGACACCAGAAAACTATAGTCTTTACTCGCAAGCAGAAGGATGCATGGCCGAACAACCCTGA

Coding sequence (CDS)

ATGATGGATCCTTACCACCACCAGAACCCTCCTCTTCGCGACGATCATCTCCGTTACCTTACCGGAACCACCGCTGGCGCTCTCTACGTCAAAGTCATGACCGACGAGCAATTGGAGACTCTTCGCAAGCAAATTGCTGTTTACGCCACCATTTGCGAGCAGCTTGTTGAGATGCACAAGACTCTTACTGCTCACCAGGATCTCAAAGGAATGAGGTTGGGTAGTGTGTACTATGAGCCATTGATGGCATCTTCCAGCCACAAAATTACTTCTAGACAGCGATGGACTCCGTCGCCCGTGCAACTTCAGATCTTGGAGCGTATATTTGAGCAAGGGAATGGAACTCCTAGCAAGCAAAAGATCAAAGAGATTACCTCTGAACTGGGTCAACATGGGCAAATTTCTGAATCAAATGTCTATAATTGGTTCCAAAACAGGCGTGCTCGATCAAAGAGGAAGCAGCAGGGTACAGCGCCTACGTATGGTGAATCAGAATTGGAGACAGAAGTCGAGTCGCCGAAAGATAAGAAGACAAAACCTGTGGATTTTCAAACTCCTCAAACCTCTGCACCTTTGGGGGAGGACATGGGCTTCCAGAGTCCTGAGATGCACTATGAACTGCATTTCCTGGATCCAAACACCAACAAAGCTGATACTTTGTTTCCATCAAATGGAAGTTCAAAAACCGCAAGAACTTTTAGTCAGATGTCTTCTTATGAAGCAGGGAATGAACAGCTGACAGGAAAGATCGAGACACCAGAAAACTATAGTCTTTACTCGCAAGCAGAAGGATGCATGGCCGAACAACCCTGA

Protein sequence

MMDPYHHQNPPLRDDHLRYLTGTTAGALYVKVMTDEQLETLRKQIAVYATICEQLVEMHKTLTAHQDLKGMRLGSVYYEPLMASSSHKITSRQRWTPSPVQLQILERIFEQGNGTPSKQKIKEITSELGQHGQISESNVYNWFQNRRARSKRKQQGTAPTYGESELETEVESPKDKKTKPVDFQTPQTSAPLGEDMGFQSPEMHYELHFLDPNTNKADTLFPSNGSSKTARTFSQMSSYEAGNEQLTGKIETPENYSLYSQAEGCMAEQP

Homology

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BLAST of Carg01182-RA vs. NCBI nr
Match: KAG7027822.1 (WUSCHEL-related homeobox 13 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 542.7 bits (1397), Expect = 1.8e-150
Identity = 270/270 (100.00%), Postives = 270/270 (100.00%), Query Frame = 0


Query: 1   MMDPYHHQNPPLRDDHLRYLTGTTAGALYVKVMTDEQLETLRKQIAVYATICEQLVEMHK 60
           MMDPYHHQNPPLRDDHLRYLTGTTAGALYVKVMTDEQLETLRKQIAVYATICEQLVEMHK
Sbjct: 1   MMDPYHHQNPPLRDDHLRYLTGTTAGALYVKVMTDEQLETLRKQIAVYATICEQLVEMHK 60

Query: 61  TLTAHQDLKGMRLGSVYYEPLMASSSHKITSRQRWTPSPVQLQILERIFEQGNGTPSKQK 120
           TLTAHQDLKGMRLGSVYYEPLMASSSHKITSRQRWTPSPVQLQILERIFEQGNGTPSKQK
Sbjct: 61  TLTAHQDLKGMRLGSVYYEPLMASSSHKITSRQRWTPSPVQLQILERIFEQGNGTPSKQK 120

Query: 121 IKEITSELGQHGQISESNVYNWFQNRRARSKRKQQGTAPTYGESELETEVESPKDKKTKP 180
           IKEITSELGQHGQISESNVYNWFQNRRARSKRKQQGTAPTYGESELETEVESPKDKKTKP
Sbjct: 121 IKEITSELGQHGQISESNVYNWFQNRRARSKRKQQGTAPTYGESELETEVESPKDKKTKP 180

Query: 181 VDFQTPQTSAPLGEDMGFQSPEMHYELHFLDPNTNKADTLFPSNGSSKTARTFSQMSSYE 240
           VDFQTPQTSAPLGEDMGFQSPEMHYELHFLDPNTNKADTLFPSNGSSKTARTFSQMSSYE
Sbjct: 181 VDFQTPQTSAPLGEDMGFQSPEMHYELHFLDPNTNKADTLFPSNGSSKTARTFSQMSSYE 240

Query: 241 AGNEQLTGKIETPENYSLYSQAEGCMAEQP 271
           AGNEQLTGKIETPENYSLYSQAEGCMAEQP
Sbjct: 241 AGNEQLTGKIETPENYSLYSQAEGCMAEQP 270

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BLAST of Carg01182-RA vs. NCBI nr
Match: KAG6596270.1 (WUSCHEL-related homeobox 13, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 539.7 bits (1389), Expect = 1.5e-149
Identity = 269/270 (99.63%), Postives = 269/270 (99.63%), Query Frame = 0


Query: 1   MMDPYHHQNPPLRDDHLRYLTGTTAGALYVKVMTDEQLETLRKQIAVYATICEQLVEMHK 60
           MMDPYHHQNPPLRDDHLRYLTGTTAGALYVKVMTDEQLETLRKQIAVYATICEQLVEMHK
Sbjct: 1   MMDPYHHQNPPLRDDHLRYLTGTTAGALYVKVMTDEQLETLRKQIAVYATICEQLVEMHK 60

Query: 61  TLTAHQDLKGMRLGSVYYEPLMASSSHKITSRQRWTPSPVQLQILERIFEQGNGTPSKQK 120
           TLTAHQDLKGMRLGSVYYEPLMASSSHKITSRQRWTPSPVQLQILERIFEQGNGTPSKQK
Sbjct: 61  TLTAHQDLKGMRLGSVYYEPLMASSSHKITSRQRWTPSPVQLQILERIFEQGNGTPSKQK 120

Query: 121 IKEITSELGQHGQISESNVYNWFQNRRARSKRKQQGTAPTYGESELETEVESPKDKKTKP 180
           IKEITSELGQHGQISESNVYNWFQNRRARSKRKQQGTAPTYGESELETEVESPKDKKTKP
Sbjct: 121 IKEITSELGQHGQISESNVYNWFQNRRARSKRKQQGTAPTYGESELETEVESPKDKKTKP 180

Query: 181 VDFQTPQTSAPLGEDMGFQSPEMHYELHFLDPNTNKADTLFPSNGSSKTARTFSQMSSYE 240
           VDFQTPQTSAPLGEDMGFQSPEMHYELHFLDPNTNKADTLFPSNGSSKTARTFSQMSSYE
Sbjct: 181 VDFQTPQTSAPLGEDMGFQSPEMHYELHFLDPNTNKADTLFPSNGSSKTARTFSQMSSYE 240

Query: 241 AGNEQLTGKIETPENYSLYSQAEGCMAEQP 271
           AGNEQLTGKIETPENYSLYSQAE CMAEQP
Sbjct: 241 AGNEQLTGKIETPENYSLYSQAERCMAEQP 270

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BLAST of Carg01182-RA vs. NCBI nr
Match: XP_022936250.1 (WUSCHEL-related homeobox 13 isoform X1 [Cucurbita moschata])

HSP 1 Score: 534.3 bits (1375), Expect = 6.2e-148
Identity = 269/275 (97.82%), Postives = 269/275 (97.82%), Query Frame = 0


Query: 1   MMDPY-----HHQNPPLRDDHLRYLTGTTAGALYVKVMTDEQLETLRKQIAVYATICEQL 60
           MMDPY     HHQNPPLRDDHLRYLTGTTAGALYVKVMTDEQLETLRKQIAVYATICEQL
Sbjct: 1   MMDPYHHHHHHHQNPPLRDDHLRYLTGTTAGALYVKVMTDEQLETLRKQIAVYATICEQL 60

Query: 61  VEMHKTLTAHQDLKGMRLGSVYYEPLMASSSHKITSRQRWTPSPVQLQILERIFEQGNGT 120
           VEMHKTLTAHQDLKGMRLGSVYYEPLMASSSHKITSRQRWTP PVQLQILERIFEQGNGT
Sbjct: 61  VEMHKTLTAHQDLKGMRLGSVYYEPLMASSSHKITSRQRWTPLPVQLQILERIFEQGNGT 120

Query: 121 PSKQKIKEITSELGQHGQISESNVYNWFQNRRARSKRKQQGTAPTYGESELETEVESPKD 180
           PSKQKIKEITSELGQHGQISESNVYNWFQNRRARSKRKQQGTAPTYGESELETEVESPKD
Sbjct: 121 PSKQKIKEITSELGQHGQISESNVYNWFQNRRARSKRKQQGTAPTYGESELETEVESPKD 180

Query: 181 KKTKPVDFQTPQTSAPLGEDMGFQSPEMHYELHFLDPNTNKADTLFPSNGSSKTARTFSQ 240
           KKTKPVDFQTPQTSAPLGEDMGFQSPEMHYELHFLDPNTNKADTLFPSNGSSKTARTFSQ
Sbjct: 181 KKTKPVDFQTPQTSAPLGEDMGFQSPEMHYELHFLDPNTNKADTLFPSNGSSKTARTFSQ 240

Query: 241 MSSYEAGNEQLTGKIETPENYSLYSQAEGCMAEQP 271
           MSSYEAGNEQLTGKIETPENYSLYSQAEGCMAEQP
Sbjct: 241 MSSYEAGNEQLTGKIETPENYSLYSQAEGCMAEQP 275

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BLAST of Carg01182-RA vs. NCBI nr
Match: XP_022971554.1 (WUSCHEL-related homeobox 13-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 528.9 bits (1361), Expect = 2.6e-146
Identity = 265/272 (97.43%), Postives = 267/272 (98.16%), Query Frame = 0


Query: 1   MMDPY--HHQNPPLRDDHLRYLTGTTAGALYVKVMTDEQLETLRKQIAVYATICEQLVEM 60
           MMDPY  HHQNPPLRDDHLRYLTGTTAGALYVKVMTDEQLETLRKQIAVYATICEQLVEM
Sbjct: 1   MMDPYHHHHQNPPLRDDHLRYLTGTTAGALYVKVMTDEQLETLRKQIAVYATICEQLVEM 60

Query: 61  HKTLTAHQDLKGMRLGSVYYEPLMASSSHKITSRQRWTPSPVQLQILERIFEQGNGTPSK 120
           HKTLTAHQDLKGMRLGSVYYEPLMASSSHKITSRQRWTP PVQLQILERIFEQGNGTPSK
Sbjct: 61  HKTLTAHQDLKGMRLGSVYYEPLMASSSHKITSRQRWTPLPVQLQILERIFEQGNGTPSK 120

Query: 121 QKIKEITSELGQHGQISESNVYNWFQNRRARSKRKQQGTAPTYGESELETEVESPKDKKT 180
           QKIKEITSELGQHGQISESNVYNWFQNRRARSKRKQQGTAP YGESELETEVESPKDKKT
Sbjct: 121 QKIKEITSELGQHGQISESNVYNWFQNRRARSKRKQQGTAPAYGESELETEVESPKDKKT 180

Query: 181 KPVDFQTPQTSAPLGEDMGFQSPEMHYELHFLDPNTNKADTLFPSNGSSKTARTFSQMSS 240
           KPVDFQTPQTSAPLGED+GFQSPEMHYELHFLDPNTNKADTLFPSNGSSKTAR+FSQMSS
Sbjct: 181 KPVDFQTPQTSAPLGEDVGFQSPEMHYELHFLDPNTNKADTLFPSNGSSKTARSFSQMSS 240

Query: 241 YEAGNEQLTGKIETPENYSLYSQAEGCMAEQP 271
           YEAGNEQLTGKIETPENYSLYSQAEGCM EQP
Sbjct: 241 YEAGNEQLTGKIETPENYSLYSQAEGCMTEQP 272

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BLAST of Carg01182-RA vs. NCBI nr
Match: XP_022936256.1 (WUSCHEL-related homeobox 13 isoform X2 [Cucurbita moschata])

HSP 1 Score: 528.1 bits (1359), Expect = 4.5e-146
Identity = 268/275 (97.45%), Postives = 268/275 (97.45%), Query Frame = 0


Query: 1   MMDPY-----HHQNPPLRDDHLRYLTGTTAGALYVKVMTDEQLETLRKQIAVYATICEQL 60
           MMDPY     HHQNPPLRDDHLRYLTGTTAGALYVKVMTDEQLETLRKQIAVYATICEQL
Sbjct: 1   MMDPYHHHHHHHQNPPLRDDHLRYLTGTTAGALYVKVMTDEQLETLRKQIAVYATICEQL 60

Query: 61  VEMHKTLTAHQDLKGMRLGSVYYEPLMASSSHKITSRQRWTPSPVQLQILERIFEQGNGT 120
           VEMHKTLTAHQDLKGMRLGSVYYEPLMASSSHKITSRQRWTP PVQLQILERIFEQGNGT
Sbjct: 61  VEMHKTLTAHQDLKGMRLGSVYYEPLMASSSHKITSRQRWTPLPVQLQILERIFEQGNGT 120

Query: 121 PSKQKIKEITSELGQHGQISESNVYNWFQNRRARSKRKQQGTAPTYGESELETEVESPKD 180
           PSKQKIKEITSELGQHGQISESNVYNWFQNRRARSKRKQQGTAPTYGESELETEVESPKD
Sbjct: 121 PSKQKIKEITSELGQHGQISESNVYNWFQNRRARSKRKQQGTAPTYGESELETEVESPKD 180

Query: 181 KKTKPVDFQTPQTSAPLGEDMGFQSPEMHYELHFLDPNTNKADTLFPSNGSSKTARTFSQ 240
           KKTKPVDFQTPQTSAPLGEDMGFQSPEMHYELHFLDPNTNKADTLFPSNGSSKTARTFSQ
Sbjct: 181 KKTKPVDFQTPQTSAPLGEDMGFQSPEMHYELHFLDPNTNKADTLFPSNGSSKTARTFSQ 240

Query: 241 MSSYEAGNEQLTGKIETPENYSLYSQAEGCMAEQP 271
           MSSYE GNEQLTGKIETPENYSLYSQAEGCMAEQP
Sbjct: 241 MSSYE-GNEQLTGKIETPENYSLYSQAEGCMAEQP 274

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BLAST of Carg01182-RA vs. ExPASy Swiss-Prot
Match: O81788 (WUSCHEL-related homeobox 13 OS=Arabidopsis thaliana OX=3702 GN=WOX13 PE=2 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 1.2e-64
Identity = 142/281 (50.53%), Postives = 176/281 (62.63%), Query Frame = 0


Query: 2   MDPYHHQNPPLRDDHLRYLTGTTAGALYVKVMTDEQLETLRKQIAVYATICEQLVEMHKT 61
           + P +H +  L+   +   +G   G +YVKVMTDEQ ETLRKQIA+Y TICE+LVEMHKT
Sbjct: 8   LQPNNHHSSNLQGIDVNGGSG-AGGGMYVKVMTDEQYETLRKQIAIYGTICERLVEMHKT 67

Query: 62  LTAHQDLKGMRLGSVYYEPLMASSSHKITSRQRWTPSPVQLQILERIFEQGNGTPSKQKI 121
           LTA QDL G R+G +Y +P+M+S  HK+T+RQRWTP+PVQLQILERIF+QG GTPSKQKI
Sbjct: 68  LTAQQDLAGGRMGGLYADPMMSSLGHKMTARQRWTPTPVQLQILERIFDQGTGTPSKQKI 127

Query: 122 KEITSELGQHGQISESNVYNWFQNRRARSKRKQQG---TAPTYGESELETEVESPKDKK- 181
           K+IT EL QHGQI+E NVYNWFQNRRARSKRKQ G   +    GESE+ETEVE+  +K+ 
Sbjct: 128 KDITEELSQHGQIAEQNVYNWFQNRRARSKRKQHGGGSSGNNNGESEVETEVEALNEKRV 187

Query: 182 ---------------TKPVDFQTPQTSAPLGEDMGFQSPEMHYELHFLDPNTNKADTLFP 241
                             +   T  T+AP  ED+ FQSPE+  +LH LD  +N  D    
Sbjct: 188 VRPESLLGLPDGNSNNNGLGTTTATTTAPRPEDLCFQSPEISSDLHLLDVLSNPRD---- 247

Query: 242 SNGSSKTARTFSQMSSYEAGNEQLTGKIETPENYSLYSQAE 264
                                E L GK+   E+Y+LY   E
Sbjct: 248 ---------------------EHLVGKMGLAESYNLYDHVE 262

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BLAST of Carg01182-RA vs. ExPASy Swiss-Prot
Match: Q5QMM3 (WUSCHEL-related homeobox 8 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX8 PE=2 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 5.1e-60
Identity = 129/245 (52.65%), Postives = 167/245 (68.16%), Query Frame = 0


Query: 22  GTTAGALYVKVMTDEQLETLRKQIAVYATICEQLVEMHKTLTAHQD-LKGMRLGSVYYEP 81
           G   G  YVKVMTDEQ+E LRKQI++YATICEQLVEMH+ LTA QD + GMRLG++Y +P
Sbjct: 19  GGEGGLGYVKVMTDEQMEVLRKQISIYATICEQLVEMHRALTAQQDSIAGMRLGNLYCDP 78

Query: 82  LMASSSHKITSRQRWTPSPVQLQILERIFEQGNGTPSKQKIKEITSELGQHGQISESNVY 141
           LM    HKIT+RQRWTP+P+QLQILE IF+QGNGTPSKQKIK+IT+EL QHGQISE+NVY
Sbjct: 79  LMVPGGHKITARQRWTPTPMQLQILENIFDQGNGTPSKQKIKDITAELSQHGQISETNVY 138

Query: 142 NWFQNRRARSKRKQQGTAPTYGESELETEVESPKDKKTKPVDFQTPQTSAPLGEDMGFQ- 201
           NWFQNRRARSKRKQ        ESE E + ESP DKK        P++  PL +++  + 
Sbjct: 139 NWFQNRRARSKRKQAALPNNNAESEAEADEESPTDKK--------PKSDRPLHQNIAMRD 198

Query: 202 -SPEMHYELHFLDPNTNKADTLF--PSNGSSKTARTFSQMSSYE-----AGNEQLTGKIE 257
            + E   E+H  D    +   +    ++ SS+++ +  QMS Y+        +   GK+E
Sbjct: 199 HNSERISEMHHFDTEHEQIRRMMYASNDSSSRSSGSLGQMSFYDNVMSNPRIDHFLGKVE 255

[Close]

BLAST of Carg01182-RA vs. ExPASy Swiss-Prot
Match: Q9LM84 (WUSCHEL-related homeobox 14 OS=Arabidopsis thaliana OX=3702 GN=WOX14 PE=1 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 9.3e-38
Identity = 80/143 (55.94%), Postives = 114/143 (79.72%), Query Frame = 0


Query: 26  GALYVKVMTDEQLETLRKQIAVYATICEQLVEMHKTLTAHQDL-KGMR-LGSVYYEPLMA 85
           GA   +VMT+EQ+E LRKQIAVYA IC+QLV +H +L+++  L  G+R +   Y++P+ A
Sbjct: 24  GAYSGRVMTEEQMEILRKQIAVYAVICDQLVLLHNSLSSYHPLSSGVRPMVGGYFDPMGA 83

Query: 86  -SSSHKITSRQRWTPSPVQLQILERIFEQGNGTPSKQKIKEITSELGQHGQISESNVYNW 145
            SSSH+I++R RWTP+  QLQILE I+++G+GTP++++I+EI +EL +HGQI+E+NVYNW
Sbjct: 84  SSSSHRISTRHRWTPTSTQLQILESIYDEGSGTPNRRRIREIATELSEHGQITETNVYNW 143

Query: 146 FQNRRARSKRKQQGTAPTYGESE 166
           FQNRRARSKRKQ  T    G+++
Sbjct: 144 FQNRRARSKRKQPQTTTANGQAD 166

[Close]

BLAST of Carg01182-RA vs. ExPASy Swiss-Prot
Match: Q9LM83 (Putative WUSCHEL-related homeobox 10 OS=Arabidopsis thaliana OX=3702 GN=WOX10 PE=3 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 2.5e-35
Identity = 77/130 (59.23%), Postives = 104/130 (80.00%), Query Frame = 0


Query: 31  KVMTDEQLETLRKQIAVYATICEQLVEMHKTLTAHQDL-KGMR-LGSVYYEPLMASSS-H 90
           +VMTDEQ+ETLRKQIA+YA +C+QLV +H +L++   L  GM  +   Y++P++ASSS H
Sbjct: 13  RVMTDEQMETLRKQIAIYAVLCDQLVFLHNSLSSVPLLSSGMNPMRGEYFDPMVASSSAH 72

Query: 91  KITSRQRWTPSPVQLQILERIFEQGNGTPSKQKIKEITSELGQHGQISESNVYNWFQNRR 150
            +++R RWTP+  QLQILE I+++G+GTP+ ++IKEIT EL +HGQI E NVY+WFQNRR
Sbjct: 73  GMSTRPRWTPTTTQLQILENIYKEGSGTPNPRRIKEITMELSEHGQIMEKNVYHWFQNRR 132

Query: 151 ARSKRKQQGT 158
           ARSKRKQ  T
Sbjct: 133 ARSKRKQPPT 142

[Close]

BLAST of Carg01182-RA vs. ExPASy Swiss-Prot
Match: Q6X7K0 (WUSCHEL-related homeobox 1 OS=Arabidopsis thaliana OX=3702 GN=WOX1 PE=2 SV=2)

HSP 1 Score: 70.1 bits (170), Expect = 4.4e-11
Identity = 49/155 (31.61%), Postives = 81/155 (52.26%), Query Frame = 0


Query: 61  TLTAHQDLKGMRL--GSVYYEPLMASSSHKITSRQRWTPSPVQLQILERIFEQGNGTPSK 120
           T+TA Q+ + + +      + P+M SS        RW P+P QL++LE ++ QG  TPS 
Sbjct: 49  TMTAEQNKRELMMLNSEPQHPPVMVSS--------RWNPTPDQLRVLEELYRQGTRTPSA 108

Query: 121 QKIKEITSELGQHGQISESNVYNWFQNRRARSKRKQQGTAPT-YGESELETE--VESPKD 180
             I++IT++L ++G+I   NV+ WFQN +AR ++K++    T + E+ L T   V +   
Sbjct: 109 DHIQQITAQLRRYGKIEGKNVFYWFQNHKARERQKRRRQMETGHEETVLSTASLVSNHGF 168

Query: 181 KKTKPVDFQTPQTS---APLGEDMGFQSPEMHYEL 208
            K  P  ++  Q       +G D   + P   Y L
Sbjct: 169 DKKDPPGYKVEQVKNWICSVGCDTQPEKPSRDYHL 195

[Close]

BLAST of Carg01182-RA vs. ExPASy TrEMBL
Match: A0A6J1FD42 (WUSCHEL-related homeobox 13 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111442921 PE=4 SV=1)

HSP 1 Score: 534.3 bits (1375), Expect = 3.0e-148
Identity = 269/275 (97.82%), Postives = 269/275 (97.82%), Query Frame = 0


Query: 1   MMDPY-----HHQNPPLRDDHLRYLTGTTAGALYVKVMTDEQLETLRKQIAVYATICEQL 60
           MMDPY     HHQNPPLRDDHLRYLTGTTAGALYVKVMTDEQLETLRKQIAVYATICEQL
Sbjct: 1   MMDPYHHHHHHHQNPPLRDDHLRYLTGTTAGALYVKVMTDEQLETLRKQIAVYATICEQL 60

Query: 61  VEMHKTLTAHQDLKGMRLGSVYYEPLMASSSHKITSRQRWTPSPVQLQILERIFEQGNGT 120
           VEMHKTLTAHQDLKGMRLGSVYYEPLMASSSHKITSRQRWTP PVQLQILERIFEQGNGT
Sbjct: 61  VEMHKTLTAHQDLKGMRLGSVYYEPLMASSSHKITSRQRWTPLPVQLQILERIFEQGNGT 120

Query: 121 PSKQKIKEITSELGQHGQISESNVYNWFQNRRARSKRKQQGTAPTYGESELETEVESPKD 180
           PSKQKIKEITSELGQHGQISESNVYNWFQNRRARSKRKQQGTAPTYGESELETEVESPKD
Sbjct: 121 PSKQKIKEITSELGQHGQISESNVYNWFQNRRARSKRKQQGTAPTYGESELETEVESPKD 180

Query: 181 KKTKPVDFQTPQTSAPLGEDMGFQSPEMHYELHFLDPNTNKADTLFPSNGSSKTARTFSQ 240
           KKTKPVDFQTPQTSAPLGEDMGFQSPEMHYELHFLDPNTNKADTLFPSNGSSKTARTFSQ
Sbjct: 181 KKTKPVDFQTPQTSAPLGEDMGFQSPEMHYELHFLDPNTNKADTLFPSNGSSKTARTFSQ 240

Query: 241 MSSYEAGNEQLTGKIETPENYSLYSQAEGCMAEQP 271
           MSSYEAGNEQLTGKIETPENYSLYSQAEGCMAEQP
Sbjct: 241 MSSYEAGNEQLTGKIETPENYSLYSQAEGCMAEQP 275

[Close]

BLAST of Carg01182-RA vs. ExPASy TrEMBL
Match: A0A6J1I8W8 (WUSCHEL-related homeobox 13-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111470237 PE=4 SV=1)

HSP 1 Score: 528.9 bits (1361), Expect = 1.3e-146
Identity = 265/272 (97.43%), Postives = 267/272 (98.16%), Query Frame = 0


Query: 1   MMDPY--HHQNPPLRDDHLRYLTGTTAGALYVKVMTDEQLETLRKQIAVYATICEQLVEM 60
           MMDPY  HHQNPPLRDDHLRYLTGTTAGALYVKVMTDEQLETLRKQIAVYATICEQLVEM
Sbjct: 1   MMDPYHHHHQNPPLRDDHLRYLTGTTAGALYVKVMTDEQLETLRKQIAVYATICEQLVEM 60

Query: 61  HKTLTAHQDLKGMRLGSVYYEPLMASSSHKITSRQRWTPSPVQLQILERIFEQGNGTPSK 120
           HKTLTAHQDLKGMRLGSVYYEPLMASSSHKITSRQRWTP PVQLQILERIFEQGNGTPSK
Sbjct: 61  HKTLTAHQDLKGMRLGSVYYEPLMASSSHKITSRQRWTPLPVQLQILERIFEQGNGTPSK 120

Query: 121 QKIKEITSELGQHGQISESNVYNWFQNRRARSKRKQQGTAPTYGESELETEVESPKDKKT 180
           QKIKEITSELGQHGQISESNVYNWFQNRRARSKRKQQGTAP YGESELETEVESPKDKKT
Sbjct: 121 QKIKEITSELGQHGQISESNVYNWFQNRRARSKRKQQGTAPAYGESELETEVESPKDKKT 180

Query: 181 KPVDFQTPQTSAPLGEDMGFQSPEMHYELHFLDPNTNKADTLFPSNGSSKTARTFSQMSS 240
           KPVDFQTPQTSAPLGED+GFQSPEMHYELHFLDPNTNKADTLFPSNGSSKTAR+FSQMSS
Sbjct: 181 KPVDFQTPQTSAPLGEDVGFQSPEMHYELHFLDPNTNKADTLFPSNGSSKTARSFSQMSS 240

Query: 241 YEAGNEQLTGKIETPENYSLYSQAEGCMAEQP 271
           YEAGNEQLTGKIETPENYSLYSQAEGCM EQP
Sbjct: 241 YEAGNEQLTGKIETPENYSLYSQAEGCMTEQP 272

[Close]

BLAST of Carg01182-RA vs. ExPASy TrEMBL
Match: A0A6J1F702 (WUSCHEL-related homeobox 13 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111442921 PE=4 SV=1)

HSP 1 Score: 528.1 bits (1359), Expect = 2.2e-146
Identity = 268/275 (97.45%), Postives = 268/275 (97.45%), Query Frame = 0


Query: 1   MMDPY-----HHQNPPLRDDHLRYLTGTTAGALYVKVMTDEQLETLRKQIAVYATICEQL 60
           MMDPY     HHQNPPLRDDHLRYLTGTTAGALYVKVMTDEQLETLRKQIAVYATICEQL
Sbjct: 1   MMDPYHHHHHHHQNPPLRDDHLRYLTGTTAGALYVKVMTDEQLETLRKQIAVYATICEQL 60

Query: 61  VEMHKTLTAHQDLKGMRLGSVYYEPLMASSSHKITSRQRWTPSPVQLQILERIFEQGNGT 120
           VEMHKTLTAHQDLKGMRLGSVYYEPLMASSSHKITSRQRWTP PVQLQILERIFEQGNGT
Sbjct: 61  VEMHKTLTAHQDLKGMRLGSVYYEPLMASSSHKITSRQRWTPLPVQLQILERIFEQGNGT 120

Query: 121 PSKQKIKEITSELGQHGQISESNVYNWFQNRRARSKRKQQGTAPTYGESELETEVESPKD 180
           PSKQKIKEITSELGQHGQISESNVYNWFQNRRARSKRKQQGTAPTYGESELETEVESPKD
Sbjct: 121 PSKQKIKEITSELGQHGQISESNVYNWFQNRRARSKRKQQGTAPTYGESELETEVESPKD 180

Query: 181 KKTKPVDFQTPQTSAPLGEDMGFQSPEMHYELHFLDPNTNKADTLFPSNGSSKTARTFSQ 240
           KKTKPVDFQTPQTSAPLGEDMGFQSPEMHYELHFLDPNTNKADTLFPSNGSSKTARTFSQ
Sbjct: 181 KKTKPVDFQTPQTSAPLGEDMGFQSPEMHYELHFLDPNTNKADTLFPSNGSSKTARTFSQ 240

Query: 241 MSSYEAGNEQLTGKIETPENYSLYSQAEGCMAEQP 271
           MSSYE GNEQLTGKIETPENYSLYSQAEGCMAEQP
Sbjct: 241 MSSYE-GNEQLTGKIETPENYSLYSQAEGCMAEQP 274

[Close]

BLAST of Carg01182-RA vs. ExPASy TrEMBL
Match: A0A6J1I625 (WUSCHEL-related homeobox 13-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111470237 PE=4 SV=1)

HSP 1 Score: 522.7 bits (1345), Expect = 9.1e-145
Identity = 264/272 (97.06%), Postives = 266/272 (97.79%), Query Frame = 0


Query: 1   MMDPY--HHQNPPLRDDHLRYLTGTTAGALYVKVMTDEQLETLRKQIAVYATICEQLVEM 60
           MMDPY  HHQNPPLRDDHLRYLTGTTAGALYVKVMTDEQLETLRKQIAVYATICEQLVEM
Sbjct: 1   MMDPYHHHHQNPPLRDDHLRYLTGTTAGALYVKVMTDEQLETLRKQIAVYATICEQLVEM 60

Query: 61  HKTLTAHQDLKGMRLGSVYYEPLMASSSHKITSRQRWTPSPVQLQILERIFEQGNGTPSK 120
           HKTLTAHQDLKGMRLGSVYYEPLMASSSHKITSRQRWTP PVQLQILERIFEQGNGTPSK
Sbjct: 61  HKTLTAHQDLKGMRLGSVYYEPLMASSSHKITSRQRWTPLPVQLQILERIFEQGNGTPSK 120

Query: 121 QKIKEITSELGQHGQISESNVYNWFQNRRARSKRKQQGTAPTYGESELETEVESPKDKKT 180
           QKIKEITSELGQHGQISESNVYNWFQNRRARSKRKQQGTAP YGESELETEVESPKDKKT
Sbjct: 121 QKIKEITSELGQHGQISESNVYNWFQNRRARSKRKQQGTAPAYGESELETEVESPKDKKT 180

Query: 181 KPVDFQTPQTSAPLGEDMGFQSPEMHYELHFLDPNTNKADTLFPSNGSSKTARTFSQMSS 240
           KPVDFQTPQTSAPLGED+GFQSPEMHYELHFLDPNTNKADTLFPSNGSSKTAR+FSQMSS
Sbjct: 181 KPVDFQTPQTSAPLGEDVGFQSPEMHYELHFLDPNTNKADTLFPSNGSSKTARSFSQMSS 240

Query: 241 YEAGNEQLTGKIETPENYSLYSQAEGCMAEQP 271
           YE GNEQLTGKIETPENYSLYSQAEGCM EQP
Sbjct: 241 YE-GNEQLTGKIETPENYSLYSQAEGCMTEQP 271

[Close]

BLAST of Carg01182-RA vs. ExPASy TrEMBL
Match: A0A6J1E6T1 (WUSCHEL-related homeobox 13-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111431127 PE=4 SV=1)

HSP 1 Score: 472.2 bits (1214), Expect = 1.4e-129
Identity = 241/268 (89.93%), Postives = 251/268 (93.66%), Query Frame = 0


Query: 4   PYHHQNPPLRDDHLRYLTGTTAGALYVKVMTDEQLETLRKQIAVYATICEQLVEMHKTLT 63
           PYHHQNPPLRDDHL +LTGTTAGALYVKVMTDEQLETLRKQIAVYATICEQLVEMHKTLT
Sbjct: 12  PYHHQNPPLRDDHLHHLTGTTAGALYVKVMTDEQLETLRKQIAVYATICEQLVEMHKTLT 71

Query: 64  AHQDLKGMRLGSVYYEPLMASSSHKITSRQRWTPSPVQLQILERIFEQGNGTPSKQKIKE 123
           AHQDL GMRLG++Y EPLM SSSHKITSRQRWTP+PVQLQILERIFEQGNGTPSKQKIKE
Sbjct: 72  AHQDLTGMRLGNMYCEPLMTSSSHKITSRQRWTPTPVQLQILERIFEQGNGTPSKQKIKE 131

Query: 124 ITSELGQHGQISESNVYNWFQNRRARSKRKQQGTAPTYGESELETEVESPKDKKTKPVDF 183
           ITSELGQHGQISESNVYNWFQNRRARSKRKQQ TAP YGESE+ETEVESPKDKKTKPVDF
Sbjct: 132 ITSELGQHGQISESNVYNWFQNRRARSKRKQQSTAPAYGESEVETEVESPKDKKTKPVDF 191

Query: 184 QTPQTSAPLGEDMGFQSPEMHYELHFLDPNTNKADTLFPSNGSSKTARTFSQMSSYEAGN 243
           QT QTSAPLG+DM FQSPEM  ELHFLDPNTNKADTLF SNGS KTAR+FSQMS YEAGN
Sbjct: 192 QTHQTSAPLGDDMCFQSPEMSSELHFLDPNTNKADTLF-SNGSLKTARSFSQMSFYEAGN 251

Query: 244 EQLTGKIETPENYSLYSQAEG-CMAEQP 271
           EQL+GKIETP+NYSLY QAEG  M E+P
Sbjct: 252 EQLSGKIETPDNYSLYQQAEGYSMTERP 278

[Close]

BLAST of Carg01182-RA vs. TAIR 10
Match: AT4G35550.1 (WUSCHEL related homeobox 13 )

HSP 1 Score: 248.1 bits (632), Expect = 8.3e-66
Identity = 142/281 (50.53%), Postives = 176/281 (62.63%), Query Frame = 0


Query: 2   MDPYHHQNPPLRDDHLRYLTGTTAGALYVKVMTDEQLETLRKQIAVYATICEQLVEMHKT 61
           + P +H +  L+   +   +G   G +YVKVMTDEQ ETLRKQIA+Y TICE+LVEMHKT
Sbjct: 8   LQPNNHHSSNLQGIDVNGGSG-AGGGMYVKVMTDEQYETLRKQIAIYGTICERLVEMHKT 67

Query: 62  LTAHQDLKGMRLGSVYYEPLMASSSHKITSRQRWTPSPVQLQILERIFEQGNGTPSKQKI 121
           LTA QDL G R+G +Y +P+M+S  HK+T+RQRWTP+PVQLQILERIF+QG GTPSKQKI
Sbjct: 68  LTAQQDLAGGRMGGLYADPMMSSLGHKMTARQRWTPTPVQLQILERIFDQGTGTPSKQKI 127

Query: 122 KEITSELGQHGQISESNVYNWFQNRRARSKRKQQG---TAPTYGESELETEVESPKDKK- 181
           K+IT EL QHGQI+E NVYNWFQNRRARSKRKQ G   +    GESE+ETEVE+  +K+ 
Sbjct: 128 KDITEELSQHGQIAEQNVYNWFQNRRARSKRKQHGGGSSGNNNGESEVETEVEALNEKRV 187

Query: 182 ---------------TKPVDFQTPQTSAPLGEDMGFQSPEMHYELHFLDPNTNKADTLFP 241
                             +   T  T+AP  ED+ FQSPE+  +LH LD  +N  D    
Sbjct: 188 VRPESLLGLPDGNSNNNGLGTTTATTTAPRPEDLCFQSPEISSDLHLLDVLSNPRD---- 247

Query: 242 SNGSSKTARTFSQMSSYEAGNEQLTGKIETPENYSLYSQAE 264
                                E L GK+   E+Y+LY   E
Sbjct: 248 ---------------------EHLVGKMGLAESYNLYDHVE 262

[Close]

BLAST of Carg01182-RA vs. TAIR 10
Match: AT1G20700.1 (WUSCHEL related homeobox 14 )

HSP 1 Score: 158.7 bits (400), Expect = 6.6e-39
Identity = 80/143 (55.94%), Postives = 114/143 (79.72%), Query Frame = 0


Query: 26  GALYVKVMTDEQLETLRKQIAVYATICEQLVEMHKTLTAHQDL-KGMR-LGSVYYEPLMA 85
           GA   +VMT+EQ+E LRKQIAVYA IC+QLV +H +L+++  L  G+R +   Y++P+ A
Sbjct: 24  GAYSGRVMTEEQMEILRKQIAVYAVICDQLVLLHNSLSSYHPLSSGVRPMVGGYFDPMGA 83

Query: 86  -SSSHKITSRQRWTPSPVQLQILERIFEQGNGTPSKQKIKEITSELGQHGQISESNVYNW 145
            SSSH+I++R RWTP+  QLQILE I+++G+GTP++++I+EI +EL +HGQI+E+NVYNW
Sbjct: 84  SSSSHRISTRHRWTPTSTQLQILESIYDEGSGTPNRRRIREIATELSEHGQITETNVYNW 143

Query: 146 FQNRRARSKRKQQGTAPTYGESE 166
           FQNRRARSKRKQ  T    G+++
Sbjct: 144 FQNRRARSKRKQPQTTTANGQAD 166

[Close]

BLAST of Carg01182-RA vs. TAIR 10
Match: AT1G20710.1 (WUSCHEL related homeobox 10 )

HSP 1 Score: 150.6 bits (379), Expect = 1.8e-36
Identity = 77/130 (59.23%), Postives = 104/130 (80.00%), Query Frame = 0


Query: 31  KVMTDEQLETLRKQIAVYATICEQLVEMHKTLTAHQDL-KGMR-LGSVYYEPLMASSS-H 90
           +VMTDEQ+ETLRKQIA+YA +C+QLV +H +L++   L  GM  +   Y++P++ASSS H
Sbjct: 13  RVMTDEQMETLRKQIAIYAVLCDQLVFLHNSLSSVPLLSSGMNPMRGEYFDPMVASSSAH 72

Query: 91  KITSRQRWTPSPVQLQILERIFEQGNGTPSKQKIKEITSELGQHGQISESNVYNWFQNRR 150
            +++R RWTP+  QLQILE I+++G+GTP+ ++IKEIT EL +HGQI E NVY+WFQNRR
Sbjct: 73  GMSTRPRWTPTTTQLQILENIYKEGSGTPNPRRIKEITMELSEHGQIMEKNVYHWFQNRR 132

Query: 151 ARSKRKQQGT 158
           ARSKRKQ  T
Sbjct: 133 ARSKRKQPPT 142

[Close]

BLAST of Carg01182-RA vs. TAIR 10
Match: AT2G33880.1 (homeobox-3 )

HSP 1 Score: 70.1 bits (170), Expect = 3.1e-12
Identity = 33/87 (37.93%), Postives = 54/87 (62.07%), Query Frame = 0


Query: 80  PLMASSSHKIT-------------SRQRWTPSPVQLQILERIFEQGNGTPSKQKIKEITS 139
           PL+ S+SH+ +              + RW P P Q++ILE IF  G   P +++I+ I +
Sbjct: 28  PLLPSASHRSSPFSSGCEVERSPEPKPRWNPKPEQIRILEAIFNSGMVNPPREEIRRIRA 87

Query: 140 ELGQHGQISESNVYNWFQNRRARSKRK 154
           +L ++GQ+ ++NV+ WFQNR++RSK K
Sbjct: 88  QLQEYGQVGDANVFYWFQNRKSRSKHK 114

[Close]

BLAST of Carg01182-RA vs. TAIR 10
Match: AT3G18010.1 (WUSCHEL related homeobox 1 )

HSP 1 Score: 70.1 bits (170), Expect = 3.1e-12
Identity = 49/155 (31.61%), Postives = 81/155 (52.26%), Query Frame = 0


Query: 61  TLTAHQDLKGMRL--GSVYYEPLMASSSHKITSRQRWTPSPVQLQILERIFEQGNGTPSK 120
           T+TA Q+ + + +      + P+M SS        RW P+P QL++LE ++ QG  TPS 
Sbjct: 49  TMTAEQNKRELMMLNSEPQHPPVMVSS--------RWNPTPDQLRVLEELYRQGTRTPSA 108

Query: 121 QKIKEITSELGQHGQISESNVYNWFQNRRARSKRKQQGTAPT-YGESELETE--VESPKD 180
             I++IT++L ++G+I   NV+ WFQN +AR ++K++    T + E+ L T   V +   
Sbjct: 109 DHIQQITAQLRRYGKIEGKNVFYWFQNHKARERQKRRRQMETGHEETVLSTASLVSNHGF 168

Query: 181 KKTKPVDFQTPQTS---APLGEDMGFQSPEMHYEL 208
            K  P  ++  Q       +G D   + P   Y L
Sbjct: 169 DKKDPPGYKVEQVKNWICSVGCDTQPEKPSRDYHL 195

The following BLAST results are available for this feature:

BLAST of Carg01182-RA vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7027822.1	1.8e-150	100.00	WUSCHEL-related homeobox 13 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6596270.1	1.5e-149	99.63	WUSCHEL-related homeobox 13, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022936250.1	6.2e-148	97.82	WUSCHEL-related homeobox 13 isoform X1 [Cucurbita moschata]	[more]
XP_022971554.1	2.6e-146	97.43	WUSCHEL-related homeobox 13-like isoform X1 [Cucurbita maxima]	[more]
XP_022936256.1	4.5e-146	97.45	WUSCHEL-related homeobox 13 isoform X2 [Cucurbita moschata]	[more]

BLAST of Carg01182-RA vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O81788	1.2e-64	50.53	WUSCHEL-related homeobox 13 OS=Arabidopsis thaliana OX=3702 GN=WOX13 PE=2 SV=1	[more]
Q5QMM3	5.1e-60	52.65	WUSCHEL-related homeobox 8 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX8 PE=2...	[more]
Q9LM84	9.3e-38	55.94	WUSCHEL-related homeobox 14 OS=Arabidopsis thaliana OX=3702 GN=WOX14 PE=1 SV=1	[more]
Q9LM83	2.5e-35	59.23	Putative WUSCHEL-related homeobox 10 OS=Arabidopsis thaliana OX=3702 GN=WOX10 PE...	[more]
Q6X7K0	4.4e-11	31.61	WUSCHEL-related homeobox 1 OS=Arabidopsis thaliana OX=3702 GN=WOX1 PE=2 SV=2	[more]

BLAST of Carg01182-RA vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FD42	3.0e-148	97.82	WUSCHEL-related homeobox 13 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A6J1I8W8	1.3e-146	97.43	WUSCHEL-related homeobox 13-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1F702	2.2e-146	97.45	WUSCHEL-related homeobox 13 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A6J1I625	9.1e-145	97.06	WUSCHEL-related homeobox 13-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1E6T1	1.4e-129	89.93	WUSCHEL-related homeobox 13-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]

BLAST of Carg01182-RA vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G35550.1	8.3e-66	50.53	WUSCHEL related homeobox 13	[more]
AT1G20700.1	6.6e-39	55.94	WUSCHEL related homeobox 14	[more]
AT1G20710.1	1.8e-36	59.23	WUSCHEL related homeobox 10	[more]
AT2G33880.1	3.1e-12	37.93	homeobox-3	[more]
AT3G18010.1	3.1e-12	31.61	WUSCHEL related homeobox 1	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 90..157 e-value: 3.2E-16 score: 69.9
IPR001356	Homeobox domain	PFAM	PF00046	Homeodomain	coord: 92..152 e-value: 2.0E-18 score: 66.0
IPR001356	Homeobox domain	PROSITE	PS50071	HOMEOBOX_2	coord: 88..153 score: 15.321177
IPR001356	Homeobox domain	CDD	cd00086	homeodomain	coord: 92..154 e-value: 1.70964E-15 score: 67.2684
None	No IPR available	GENE3D	1.10.10.60		coord: 93..158 e-value: 3.0E-21 score: 76.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 167..181
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 148..191
None	No IPR available	PANTHER	PTHR46777:SF9	SUBFAMILY NOT NAMED	coord: 21..264
IPR044559	WUSCHEL-related homeobox 13-like	PANTHER	PTHR46777	WUSCHEL-RELATED HOMEOBOX 13	coord: 21..264
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 90..155

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg01182	Carg01182	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg01182-RA:4	Carg01182-RA:4	exon
Carg01182-RA:3	Carg01182-RA:3	exon
Carg01182-RA:2	Carg01182-RA:2	exon
Carg01182-RA:1	Carg01182-RA:1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg01182-RA:cds	Carg01182-RA:cds_3	CDS
Carg01182-RA:cds	Carg01182-RA:cds_2	CDS
Carg01182-RA:cds	Carg01182-RA:cds	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg01182-RA:five_prime_utr	Carg01182-RA:five_prime_utr_2	five_prime_UTR
Carg01182-RA:five_prime_utr	Carg01182-RA:five_prime_utr	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg01182-RA	Carg01182-RA-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity