Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGAGGGTCAGATCGGTGAGAATGGCCAGCTCCTCGATGAGGGTTCCTCTGAGATTTTTGCCGTTGAGGTCGATTCCAGTGACGGCGATTCGGCCCGAACTGAGACTTGTACAGAAGATTCCTTTGTAAGAACACACATCGGAGCCGACCCATGTGGTTAAAATTCCGGTGGGGTCATCGGAAATTGTAGATTTCCATGTCTGAAGAACAGAGTATGCTCTGTTTTGGACAGTCCCTAATAATGGATCCGGTGTCGGAGTTGGAGTCGGATTCGGAGTGTTTCCACCTCCACCGCCAACCCAAATACCTTCTCCACCACCACCACCACCACCAACAAAGCCGAAACTAACTCGGCCGCTTACGCCGCCGACAACAGCTCCGGCAGGGAAAATTAGACAAGTTAAAAAAAGACACATAAAAACCCAACACTCCATTTTAAAGTTCTATACACTCACCATGAGTTTGATATTTGTTTTGTTTTCAGCATTGAAGAGATAAAAAGAGGTGGAAAATGGTTAAAAATGGAGGCCCTGACTTGAACAATACTTCTTTGTTTCTTTGGGTTTATAATGAGGACTTCCATTTTCCTTTTGTCCTAACTTTTTGTGTGCTTCCTTTTTTTTTGGGAGGTTATTTTATTTATTTTTTTCTTTCTTCTTTTTCAAACTTGAAAGATTGAGGGTTTGAAATGAGGAGTAATGTTATTGGCTAGTTGATAAATGTTGTGTATGTTTTTCTGATATTAATCTTCAAAGGAAGGAAGGGTAGGTGGATTGAGAATAAAACTGCCCATTCAATATTAATGGCTGCCAAAACACTTAGTACAAAAGTCATCTTTTATTTGTCTAAATAAAGACAGAATCACAATCACTGTTTCTTTATGACACCTCTTCAAATGGTTGACATCAGGTGAGATGATGATATCTCTTGTTTCCTTTGGTTTGGTTTGGTAATCTTAATTTTATGTTACACCTCACCACTTCAAAAAACATCATGTATATTGATACAAGCTTTTATTTTTATCTACCATTTTCAACTTATTAATTATATTCATGACATGGGCTTACTCTTTTCTTTCTTTAGAGTTCAATAATACGTGTAGTGGAGATTCAATTTTTTTACCTTTTAGTTGATGATGCATGTGTAAATTGATCATGCTATGCTTAGGTTGATGATGACATTGACTTGATTTTTCTTTATTCAGAGTTCAACCCAACACGTGTAA mRNA sequence ATGAGGATCGGTGAGAATGGCCAGCTCCTCGATGAGGGTTCCTCTGAGATTTTTGCCGTTGAGGTCGATTCCAGTGACGGCGATTCGGCCCGAACTGAGACTTGTACAGAAGATTCCTTTGTAAGAACACACATCGGAGCCGACCCATGTGAGTATGCTCTGTTTTGGACAGTCCCTAATAATGGATCCGGTGTCGGAGTTGGAGTCGGATTCGGAGTGTTTCCACCTCCACCGCCAACCCAAATACCTTCTCCACCACCACCACCACCACCAACAAAGCCGAAACTAACTCGGCCGCTTACGCCGCCGACAACAGCTCCGGCAGGGAAAATTAGACAAAGTTCAACCCAACACGTGTAA Coding sequence (CDS) ATGAGGATCGGTGAGAATGGCCAGCTCCTCGATGAGGGTTCCTCTGAGATTTTTGCCGTTGAGGTCGATTCCAGTGACGGCGATTCGGCCCGAACTGAGACTTGTACAGAAGATTCCTTTGTAAGAACACACATCGGAGCCGACCCATGTGAGTATGCTCTGTTTTGGACAGTCCCTAATAATGGATCCGGTGTCGGAGTTGGAGTCGGATTCGGAGTGTTTCCACCTCCACCGCCAACCCAAATACCTTCTCCACCACCACCACCACCACCAACAAAGCCGAAACTAACTCGGCCGCTTACGCCGCCGACAACAGCTCCGGCAGGGAAAATTAGACAAAGTTCAACCCAACACGTGTAA Protein sequence MRIGENGQLLDEGSSEIFAVEVDSSDGDSARTETCTEDSFVRTHIGADPCEYALFWTVPNNGSGVGVGVGFGVFPPPPPTQIPSPPPPPPPTKPKLTRPLTPPTTAPAGKIRQSSTQHV
Homology
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 72..119 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 72..101 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| CaUC11G216690.1-exon | CaUC11G216690.1-exon-Ciama_Chr11:30168959..30168964 | exon |
| CaUC11G216690.1-exon | CaUC11G216690.1-exon-Ciama_Chr11:30168970..30169114 | exon |
| CaUC11G216690.1-exon | CaUC11G216690.1-exon-Ciama_Chr11:30169170..30169357 | exon |
| CaUC11G216690.1-exon | CaUC11G216690.1-exon-Ciama_Chr11:30170163..30170183 | exon |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| CaUC11G216690.1-cds | CaUC11G216690.1-cds-Ciama_Chr11:30168959..30168964 | CDS |
| CaUC11G216690.1-cds | CaUC11G216690.1-cds-Ciama_Chr11:30168970..30169114 | CDS |
| CaUC11G216690.1-cds | CaUC11G216690.1-cds-Ciama_Chr11:30169170..30169357 | CDS |
| CaUC11G216690.1-cds | CaUC11G216690.1-cds-Ciama_Chr11:30170163..30170183 | CDS |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
|---|
| CaUC11G216690.1 | CaUC11G216690.1-protein | polypeptide |
|
