CaUC11G216150.1 (mRNA) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC11G216150.1
Type	mRNA
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Nucleic acid-binding, OB-fold containing protein
Location	Ciama_Chr11: 29581601 .. 29589270 (+)
Sequence length	1236
RNA-Seq Expression	CaUC11G216150.1
Synteny	CaUC11G216150.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGTCAAGCCCATATCCCATTAGCGGCCCAACGTTATCGGACAAAGAAGGCCATGTATGTTTAAAATTCATCATTTCTATATGGGATATTTAGAGATTCAAATCTCTTTTCAAAATTTATTTTTATAAATGTCCAAATTTTTTGAGGTTACTAGTTATTGAAGCTAATCACTCTTTGAGTAAGGCTTTTAAGGGGGTGGCCTTGTGGAGTTTAAGATTGATGAACTAAGATATTTAGGGATATCCTTACGAGCATGCTATGTCAAAAGAAGGATAATGTTGCATGGTTGTAGAACTCTCCTTAAAATTCCTAGCTTAGTTGACCTAATGAGGTAGAAAAGCTAGATAGTCGAAAAGAGGACGAAAGACTTAAAGTTAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAGTAAGTGTTTGTGGGTTTGAAATGAAAATTTATCTTACCAGGTATTTGAAATATTGTGGATTCTATCTATGTCATTATTTGGGGTGAGAATTGTCTGGATTAATCAACTGGACCAGAAAGAGAAATTTGGTTTTAAAAAGCAATGCCACTAAGTAGAGAAAATCCTACTAAAGATTGAACTTGAACCTTGAAATGCAAGTTCTTATGGTATGATTATAAAAAGAGACAAATTGTGTGTTTTGGGATTCTCACTTGAGAGGTAAAATGGTCACCTTAGTGACCTTAGTAGAGGTAAGTGTGTGTGGGAAAGAAGCGTGTTAAAAGAAAAGTTTTGTTGACTTGGAAGACAAGGTGAGATTATTATGTCAAGACTCCAAGTATATGTAAGAACCAAATGTCATAGATTTGCTGCACCATGGAAAAACCACTGTCCTGAAAGCAATTATGGCGCGACCTCGGTGCTAATCGCTACTATCGGTTGCTTCCCAAGGTTAACATAGCTTCCAATCTCAGGTGTGCACTCACTAGAGGATGGATTGGAATCAAAGAAAATGCTCATAACAGATTACAAAATATCAGTGAACAAAAACGAAGCGAAGAAGAACCGATATCAAGACCATCTTTTGTTCTGTGTATATGAAGAAGAAAACCAAAACAGATGCTATGATTGGAACGGGAAGAAAACGGGAATAAAAACGGGCAAAAAAAAATTAAATGAGATGGATCTCATTTAATATTTAGAAAATCGGTTTGAAAAAGAAATTAAATGGATAAGTAATAAAAAATTATTTCTTTTTTCGTGCAAGCACGATTACCCAAACTCATCCGTCTGACCAGGCAGCAATAATACGCGATTGTGGTGAAAAGGTTAACTTTCCACCTCCACCACACTTTAGAATCACTTCTATCATGCCTTGGTATTTATACCTTTGAGGCATTGCTTAACTTTTTCCAATGTGGTACGACTTTCCTCCCCATTCTTTTTAACTTTGCTATGGGCCTAAGCCCAAGTCATTCCCAATAGTATACAAGTATGATCTAATTTTGTAAGATTTGACCTTTGTGTTTGCAAGTTGTTGAATTTTGGTAGAGGAACTCTCGTTACCATTCGTGACTTTGAGCCTTGGTATGTGTTAGATAAAAAACAGATATTTCCCAAAGTTGATGATTTTGAAAATCAGTTTTAGCATGAAAATCTTATTCCTAAAATAATGAAATCTTGTCAGTTGCTAGCGTGTCTAATTGCTTTGTGGTTATATTATAAAGATAGTAATCTCGAGTACAAATAATTAAGGTTTCTTGAGAGTAGTGTCTATGAGGGCGTTTGGAGGTTTGAAGAGAAGAGTGAGCTAAGCCACAATTCGTTGAGTCATTGAAGTTTTAATGCAAATTGACTATATAGTATCATGTAGCTTTGTCATTGTTTCTTTTTTCAATGCATAATGTGCTCCACATCCCCATGTTGAGGAGATGCATAGCGGAATCCTCTGAGAGACTTAATCTTGAACAGTTGCACTTAAGTGAGACCATAAGTACGAGAAATAATATAGGAACATTCATTGGCTAGTTCACAAGCTTGTCTATAACACGTGACATGTTTTGTGCATCATTGTTAAGGAAGCGTGCCTAAGAAGTTACATGAGTATTTAATTAGAAATGAGAGATAGGAGAGAAGTTAGTATTTTGGCTAAGGAGCCAAGATGTTGAAAGATATAATAAATGATTTAGAGTGTGTTTGGAATATCTTTTCAAGTGTTTAATTTAATAAATAAGTAATTTTGAAAGAAATATAAGTATTTGACAACCACTAAAAATGGATTTTGAAAGTTATTAGTATTATTTTTTTTTTTTAAATAGTTCTTATCAAAAGTATCAAATAAAAATGAATTTTTAAAAACATTTATTTTTTAAGTTAATCCAAACGAGCCCTTAGTGAAAGTATTATGGTGTGATTGGATAATTGAAAAGGCAATCATATGAGAGAAGATATGCGATTGGCGCTAAGTATTTTGTGGAAATTTCGAGGAGGAAAGTCTTTTTCATTTTTAGAAGAAAAGGATCAAAGTTTTTAAGATAGGGAGATTGTACCATTCAAGTTTTCAACAAATTATGATTAATTATCTTAAATTATTTTAGTTTCTTTAATTTTGAGCTTCTTAGAGCCAAATTTGAAATAATGGAAGGGATAATTGATTTTATTTAGAGTCAGCCGCAAACACAAACACCCCACCCCCGTTGTTTTCTCGATAACTCTCCCTCTCTAGGCTTGTAGCAGCCACATCCGTCCGCCTACAGCCGGCCGCTGCACCACCACCGTTCGAGTCGACGTCTGCCGCTCGCCGGTGAGATTAGATTCCTCCCGCCTCTTTCTTTCTATCTCTTGTTTCCGCTGAATGTTTTCCGTTTCTCTCTTCTAATGATCTCTCTGCTCGATCCGTCTCTCAGTACTGGGTGCCTACGCCGACTGCTCACGCCGTTGCTGATTCTCCTCCTCCACCACCCTCGTCGGAGTTCATCGGGTCCGGTGAGTGTGCTGTGGGTAAATGAAGGTTTTTCCTGAGTTTTCTTTTTCTTTCTTTTTTTTTTTGGGTGACGTTTTGAGCCTTGAAATATTGTGTGATTGCTGGAACTTCGGCTATTAACCTCTAATTCCACGTTGTTTGCTTAGATTCAAGCTGTGATCGTTGGAACTTTGGAGGTCTGGATCAAGTGACTTTTGGGGTAGGAGTTTTGGACGTTCCAAGGTGAATTTTTCTAGTTGGAATTGAACTTTGTTCATGAAATTTGGTGCTTTATGGATGTTTGAGTCTTGATTTTGGATCTCTATGTTTCATTAGGGAATTGAAGTGTGGGTTATGCAATATAAAGAGAGTTAAGCCCGCTAGTCTTGGTTTCTATTTCAGGTAAGTGGCTTCCTGATAATGGATTTAGAATATATTAGTGTCGATAGGATGATTTAGTGCAATACTGTTGTATGCTGATAATTGATGTGATAGTGTCATATGCATTGATGGTCTGTGAGACGCGAATGTGCATGACACGAGCCTTGTGGTGTGGGCTATGAGATATATACATGATGTGTCTTTGTGACCGAGTGTTATAACCTATGGCATGTTTGTTGCTAAAGTGTTGAGAATCCTGATGGTCTGGATGATGCGGGGGTCTCAAAACCTAAGCTTATGTTTTACTTCTTGTGTGAGTGCCATACACATTTGGACGTCGGTGTGACACAAATGTGTATGGTGGGTTCCTTAGGGGTCTAAGTATTTTAATAATGCTCAACCCCTTTTAATAGTATGTGCATTAGTTCTCTATTTCAAAGCCTTGACCCTATGAATCTTGTAGAACTTAATTAGTTTGTTTTCAAGCAAAAATATATATATTTTTTCACTTATGAATATGTTTGATTTTAGGTTTCATTATGCATCTCTTTAAATGTTAGCCAACATCTGCAACACACGTGGTAATAAAAGTTCGCTGTTTTTACCTTCTTCGAGCTCTCTTTCTTCTCTGGTTGTTGTGGATTCTTCTCCTCCTTGTTTCGGTTGCCATTTCAATGGAGGGGCTCAAGGTTTCAGAGGCTAATATGGTTGTTTACGTTCACCCATCTAAAAGTAAGAAGGTTTCGCAAGCGGTGCTTCGAGAGCTTGGTGCTATGCTTCTAAAGTAAGTCGAACTTCTTTTAGGCTTTCAACAATTCTAGTGTCCAGTCTCTTGCAATCACAACCTTTTCCTGTAATTGATAGTGTTGCTTTGTTTGAATTGTTCTGTTGAACATCTTGATTGGGGTAACCATCATGGGTTGGCCTAATGGTAAAAAAGGAGACATGGTCTCAATAAATGGTTAAGAGGTCATGCGTTCAATTCAGGGTGGCCACCTACCTAGGAACTAATATCCTACAAGTTTCTTTGACACTCATATCTTGTAGGGTTAGGCGGGTCGTACTGTGAGATTAGTCGAAGTGCGCATAAGCTGGCCCAGACATTCGTGGATATTAAAAAAAACATCTTGATTGGGGGTACTATCTGTTAATGGCAAAGTTAGACTAGTACAAACTTCAATTTAGCTATACTTTTAACTTTGAATTTAGCTTCAATTTTAGCTTAGAATTAGATTATTAGTTTCTTTCCGTATTGTTATCAAGTGGATTTTTCTTTACTCGCCTGCCATCCTGTATGGAAGAAATAAACAACTGTCTAAGTGTAAGTTTCTGTAACTTTCACGATTTTTGGGGGGAGGGTATTCATTCATTGGGGAATATCAGATGTTTTTCATTCTCTTTGAACTCAAAGGTGCAAAGTTTAAACTTGTAGTGATTGTCATCGCTGCTTCTTTTGCTCCCATTTAATTCATATTCAAGTTTATTGATGGGATAGACATGTATGAACTTCGATCGTTAACTGCATTTTTTTGTATTGTGTTCCTTGTGTAGATTTGATGAAAAATTTGAAGGCGTACTTCTGGCTTATGAGGCCAAAATTATCGATAAAAATGCGAAGATTCTGTCTGGAGTGCATCCCTATTTTGGTGTGACAATAAAGGCAAAGCTATTACTTTTCTCTCCAAAGCCAAACATGCTTTTAGGTTGGTTTTTTATGATTCTCATTGTATGTGAAGGAGTTTCATTTTTGATATGGTCTCTTCGTTATTCCTACGTGGATTTTGACATTGTTATGGTACTTCATTGCATTATGATGGTAGACATATTAATTTGACTTATAGAAGGCCAAATTTTTTATTCCTCTTGTTCATGCTTTGCTGATAGTTTTGTTCTCACTTCAGAGGGAAAGGTGGTGAAGCTTAGGCAAGAATCAATCCATATTATTGTCTTAGGTTTTGCTTCTGCTGTAATAACCGATGAAGACATTCGCGACGAATTCAAGCATAGAACAGTATGTTTTGTGCATTGTACTTGTGAATTCGTTGCTTTTCTTTTGTTGGACATATAAGAAGGAAGTTTTATGTTCTTATCCTGATTGTATTGTGCATTGATTTTGACATAGAAACATGGAGAAGAAATGTTTGTCAGCAGAGCTCACAAGCACCATGTAATAAAGGTTGGGACAATGATACGATTTTTGGTGAAGAGGTTAGATTTCTTTTTCCTTTAATGACAACAATAAACCTAATACGAATTATAGAGCTATGACATAATCAAATCCAAACGAACAAAATGTTGAATTGAACGGTACCATTTTCTTACTTATTTTTGAATTATTTCTGAAATGAAATAAAAGAAAATACTAAATAATCATAAACATTATCTTATCCCATTTGGAAGGATAACTTATGGATAATCTACCATATTTATTAATATTTCCTGATTCTTGTTCTTCCGTAATATAAATACCTTGATGATGTAACAAGTGACTTAATTCAACCTTGCAGTTTTGATGAGGAAATATTGCATATCTCTGGATCTCTAGTTCCATCTCACACAGGGAGCATCCATTGGTTGGAGAAGAATTTGGTTGAAGGTTCAGTGACTAATAGGTGAGAAACTAAATTCTATGAGGTTTTGAGCTATAATCCCCAAATCTCTTATTCTGACTTTTCCCCACTTAATTTTGTAGCAACAAAAGGAAGATGAGAGAAAATGAGGGAGACGTTAGCATTGTGCCAGATGCAAATACACTTATCTCGAACAACGACGGTAGATCAAAAACCAGAAAGCAAAAAACTACCAGAATATCTTGAAGACTGCTAGTTGTGATATAACATAGATTGTTTTTGTATCAGGTAATTTTGCCTACTCCCTCAGTAGGATGGCTAAACTCTTGCTCTCAATTCATGCCTAAATTCTTACATTGGCCAGAAATTTTCCTGAAATAAACCTGAATTTGATTTTGTATATGTAGGGTGATGATGATTCAAACTAATTCAAAGCAAGAGATCCTCATTGTTTTCCTATAG

mRNA sequence

ATGTGGTCAAGCCCATATCCCATTAGCGGCCCAACGTTATCGGACAAAGAAGGCCATGCTTGTAGCAGCCACATCCGTCCGCCTACAGCCGGCCGCTGCACCACCACCGTTCGAGTCGACGTCTGCCGCTCGCCGTACTGGGTGCCTACGCCGACTGCTCACGCCGTTGCTGATTCTCCTCCTCCACCACCCTCGTCGGAGTTCATCGGGTCCGGTGAGTGTGCTGTGGATTCAAGCTGTGATCGTTGGAACTTTGGAGGTCTGGATCAAGTGACTTTTGGGGTAGGAGTTTTGGACGTTCCAAGGGAATTGAAGTGTGGGTTATGCAATATAAAGAGAGTTAAGCCCGCTAGTCTTGGTTTCTATTTCAGTGTTGAGAATCCTGATGGTCTGGATGATGCGGGGGTCTCAAAACCTAAGCTTATGTTTTACTTCTTGTTTCGCTGTTTTTACCTTCTTCGAGCTCTCTTTCTTCTCTGGTTGTTGTGGATTCTTCTCCTCCTTGTTTCGGTTGCCATTTCAATGGAGGGGCTCAAGGTTTCAGAGGCTAATATGGTTGTTTACGTTCACCCATCTAAAAGTAAGAAGGTTTCGCAAGCGGTGCTTCGAGAGCTTGGTGCTATGCTTCTAAAATTTGATGAAAAATTTGAAGGCGTACTTCTGGCTTATGAGGCCAAAATTATCGATAAAAATGCGAAGATTCTGTCTGGAGTGCATCCCTATTTTGGTGTGACAATAAAGGCAAAGCTATTACTTTTCTCTCCAAAGCCAAACATGCTTTTAGAGGGAAAGGTGGTGAAGCTTAGGCAAGAATCAATCCATATTATTGTCTTAGGTTTTGCTTCTGCTGTAATAACCGATGAAGACATTCGCGACGAATTCAAGCATAGAACAAAACATGGAGAAGAAATGTTTGTCAGCAGAGCTCACAAGCACCATGTAATAAAGGTTGGGACAATGATACGATTTTTGGTGAAGAGTTTTGATGAGGAAATATTGCATATCTCTGGATCTCTAGTTCCATCTCACACAGGGAGCATCCATTGGTTGGAGAAGAATTTGGTTGAAGGTTCAGTGACTAATAGCAACAAAAGGAAGATGAGAGAAAATGAGGGAGACGTTAGCATTGTGCCAGATGCAAATACACTTATCTCGAACAACGACGATTGTTTTTGTATCAGGGTGATGATGATTCAAACTAATTCAAAGCAAGAGATCCTCATTGTTTTCCTATAG

Coding sequence (CDS)

ATGTGGTCAAGCCCATATCCCATTAGCGGCCCAACGTTATCGGACAAAGAAGGCCATGCTTGTAGCAGCCACATCCGTCCGCCTACAGCCGGCCGCTGCACCACCACCGTTCGAGTCGACGTCTGCCGCTCGCCGTACTGGGTGCCTACGCCGACTGCTCACGCCGTTGCTGATTCTCCTCCTCCACCACCCTCGTCGGAGTTCATCGGGTCCGGTGAGTGTGCTGTGGATTCAAGCTGTGATCGTTGGAACTTTGGAGGTCTGGATCAAGTGACTTTTGGGGTAGGAGTTTTGGACGTTCCAAGGGAATTGAAGTGTGGGTTATGCAATATAAAGAGAGTTAAGCCCGCTAGTCTTGGTTTCTATTTCAGTGTTGAGAATCCTGATGGTCTGGATGATGCGGGGGTCTCAAAACCTAAGCTTATGTTTTACTTCTTGTTTCGCTGTTTTTACCTTCTTCGAGCTCTCTTTCTTCTCTGGTTGTTGTGGATTCTTCTCCTCCTTGTTTCGGTTGCCATTTCAATGGAGGGGCTCAAGGTTTCAGAGGCTAATATGGTTGTTTACGTTCACCCATCTAAAAGTAAGAAGGTTTCGCAAGCGGTGCTTCGAGAGCTTGGTGCTATGCTTCTAAAATTTGATGAAAAATTTGAAGGCGTACTTCTGGCTTATGAGGCCAAAATTATCGATAAAAATGCGAAGATTCTGTCTGGAGTGCATCCCTATTTTGGTGTGACAATAAAGGCAAAGCTATTACTTTTCTCTCCAAAGCCAAACATGCTTTTAGAGGGAAAGGTGGTGAAGCTTAGGCAAGAATCAATCCATATTATTGTCTTAGGTTTTGCTTCTGCTGTAATAACCGATGAAGACATTCGCGACGAATTCAAGCATAGAACAAAACATGGAGAAGAAATGTTTGTCAGCAGAGCTCACAAGCACCATGTAATAAAGGTTGGGACAATGATACGATTTTTGGTGAAGAGTTTTGATGAGGAAATATTGCATATCTCTGGATCTCTAGTTCCATCTCACACAGGGAGCATCCATTGGTTGGAGAAGAATTTGGTTGAAGGTTCAGTGACTAATAGCAACAAAAGGAAGATGAGAGAAAATGAGGGAGACGTTAGCATTGTGCCAGATGCAAATACACTTATCTCGAACAACGACGATTGTTTTTGTATCAGGGTGATGATGATTCAAACTAATTCAAAGCAAGAGATCCTCATTGTTTTCCTATAG

Protein sequence

MWSSPYPISGPTLSDKEGHACSSHIRPPTAGRCTTTVRVDVCRSPYWVPTPTAHAVADSPPPPPSSEFIGSGECAVDSSCDRWNFGGLDQVTFGVGVLDVPRELKCGLCNIKRVKPASLGFYFSVENPDGLDDAGVSKPKLMFYFLFRCFYLLRALFLLWLLWILLLLVSVAISMEGLKVSEANMVVYVHPSKSKKVSQAVLRELGAMLLKFDEKFEGVLLAYEAKIIDKNAKILSGVHPYFGVTIKAKLLLFSPKPNMLLEGKVVKLRQESIHIIVLGFASAVITDEDIRDEFKHRTKHGEEMFVSRAHKHHVIKVGTMIRFLVKSFDEEILHISGSLVPSHTGSIHWLEKNLVEGSVTNSNKRKMRENEGDVSIVPDANTLISNNDDCFCIRVMMIQTNSKQEILIVFL

Homology

[Close]

BLAST of CaUC11G216150.1 vs. NCBI nr
Match: XP_038889707.1 (uncharacterized protein LOC120079556 isoform X1 [Benincasa hispida] >XP_038889708.1 uncharacterized protein LOC120079556 isoform X1 [Benincasa hispida])

HSP 1 Score: 383.6 bits (984), Expect = 2.1e-102
Identity = 195/214 (91.12%), Postives = 202/214 (94.39%), Query Frame = 0


Query: 175 MEGLKVSEANMVVYVHPSKSKKVSQAVLRELGAMLLKFDEKFEGVLLAYEAKIIDKNAKI 234
           MEGLKVS+AN+VVYVHPSKSKKVSQAVLRELG MLLKFDEKFEGVLLAYEA IIDKNAKI
Sbjct: 1   MEGLKVSDANLVVYVHPSKSKKVSQAVLRELGTMLLKFDEKFEGVLLAYEANIIDKNAKI 60

Query: 235 LSGVHPYFGVTIKAKLLLFSPKPNMLLEGKVVKLRQESIHIIVLGFASAVITDEDIRDEF 294
           LSGVHPYFGVTIKAKLLLFSPKPNMLLEGKVVKLRQESIH+IVLGF+S VITDEDIRDEF
Sbjct: 61  LSGVHPYFGVTIKAKLLLFSPKPNMLLEGKVVKLRQESIHVIVLGFSSGVITDEDIRDEF 120

Query: 295 KHRTKHGEEMFVSRAHKHHVIKVGTMIRFLVKSFDEEILHISGSLVPSHTGSIHWLEKNL 354
           KHRTKHGEEMFVSR HKHHVIKVGTMIRFLVKSFDEEILHISGSLVPSHTGSIHWLEKN 
Sbjct: 121 KHRTKHGEEMFVSRVHKHHVIKVGTMIRFLVKSFDEEILHISGSLVPSHTGSIHWLEKNS 180

Query: 355 VEGSVTNSNKRKMRENEGDVSIVPDANTLISNND 389
           VEGSVTNS+K+K RENEG  S+  DAN LI NND
Sbjct: 181 VEGSVTNSSKKKTRENEGKASVSTDANALILNND 214

[Close]

BLAST of CaUC11G216150.1 vs. NCBI nr
Match: XP_038889709.1 (uncharacterized protein LOC120079556 isoform X2 [Benincasa hispida])

HSP 1 Score: 379.0 bits (972), Expect = 5.1e-101
Identity = 195/214 (91.12%), Postives = 201/214 (93.93%), Query Frame = 0


Query: 175 MEGLKVSEANMVVYVHPSKSKKVSQAVLRELGAMLLKFDEKFEGVLLAYEAKIIDKNAKI 234
           MEGLKVS+AN+VVYVHPSKSKKVSQAVLRELG MLLKFDEKFEGVLLAYEA IIDKNAKI
Sbjct: 1   MEGLKVSDANLVVYVHPSKSKKVSQAVLRELGTMLLKFDEKFEGVLLAYEANIIDKNAKI 60

Query: 235 LSGVHPYFGVTIKAKLLLFSPKPNMLLEGKVVKLRQESIHIIVLGFASAVITDEDIRDEF 294
           LSGVHPYFGVTIKAKLLLFSPKPNMLLEGKVVKLRQESIH+IVLGF+S VITDEDIRDEF
Sbjct: 61  LSGVHPYFGVTIKAKLLLFSPKPNMLLEGKVVKLRQESIHVIVLGFSSGVITDEDIRDEF 120

Query: 295 KHRTKHGEEMFVSRAHKHHVIKVGTMIRFLVKSFDEEILHISGSLVPSHTGSIHWLEKNL 354
           KHRTKHGEEMFVSR HKHHVIKVGTMIRFLVKSFDEEILHISGSLVPSHTGSIHWLEKN 
Sbjct: 121 KHRTKHGEEMFVSRVHKHHVIKVGTMIRFLVKSFDEEILHISGSLVPSHTGSIHWLEKNS 180

Query: 355 VEGSVTNSNKRKMRENEGDVSIVPDANTLISNND 389
           VEGSVTNS K+K RENEG  S+  DAN LI NND
Sbjct: 181 VEGSVTNS-KKKTRENEGKASVSTDANALILNND 213

[Close]

BLAST of CaUC11G216150.1 vs. NCBI nr
Match: XP_038898978.1 (uncharacterized protein LOC120086413 isoform X3 [Benincasa hispida])

HSP 1 Score: 374.8 bits (961), Expect = 9.6e-100
Identity = 193/218 (88.53%), Postives = 206/218 (94.50%), Query Frame = 0


Query: 175 MEGLKVSEANMVVYVHPSKSKKVSQAVLRELGAMLLKFDEKFEGVLLAYEAKIIDKNAKI 234
           M+GLKVS+ANMVVYVHPSKSKKVSQAVLR LGAMLLKFDEKFEGVLLAYEAKIIDK AKI
Sbjct: 1   MDGLKVSDANMVVYVHPSKSKKVSQAVLRVLGAMLLKFDEKFEGVLLAYEAKIIDKIAKI 60

Query: 235 LSGVHPYFGVTIKAKLLLFSPKPNMLLEGKVVKLRQESIHIIVLGFASAVITDEDIRDEF 294
           LSGVHPYFGVTIKAKLLLFSPKPNML+EGKVVKLRQESIH+IVLGFASAVIT+EDIRDEF
Sbjct: 61  LSGVHPYFGVTIKAKLLLFSPKPNMLVEGKVVKLRQESIHVIVLGFASAVITNEDIRDEF 120

Query: 295 KHRTKHGEEMFVSRAHKHHVIKVGTMIRFLVKSFDEEILHISGSLVPSHTGSIHWLEKNL 354
           KHRTKHGEEMFVSRAHKHHVIKVGTMIRFLVKSFDEEILHI+GSLVPSHTGSIHWLEKN 
Sbjct: 121 KHRTKHGEEMFVSRAHKHHVIKVGTMIRFLVKSFDEEILHIAGSLVPSHTGSIHWLEKNS 180

Query: 355 VEGSVTNSNKRKMRENEGDV----SIVPDANTLISNND 389
           VEG+VT+S+K+KMRENEG+V    S+  + N LI NND
Sbjct: 181 VEGTVTSSSKKKMRENEGEVMLQDSVATEVNALILNND 218

[Close]

BLAST of CaUC11G216150.1 vs. NCBI nr
Match: XP_011652444.1 (uncharacterized protein LOC101216589 [Cucumis sativus] >XP_031737671.1 uncharacterized protein LOC101216589 [Cucumis sativus] >XP_031737672.1 uncharacterized protein LOC101216589 [Cucumis sativus] >KGN60019.1 hypothetical protein Csa_001209 [Cucumis sativus])

HSP 1 Score: 374.4 bits (960), Expect = 1.3e-99
Identity = 197/218 (90.37%), Postives = 203/218 (93.12%), Query Frame = 0


Query: 175 MEGLKVSEANMVVYVHPSKSKKVSQAVLRELGAMLLKFDEKFEGVLLAYEAKIIDKNAKI 234
           MEGLKVS+ANMVVYVHPSKSKK+SQAVLRELGAMLLKFDEKFEGVLLAYEAKIIDKNAKI
Sbjct: 1   MEGLKVSDANMVVYVHPSKSKKISQAVLRELGAMLLKFDEKFEGVLLAYEAKIIDKNAKI 60

Query: 235 LSGVHPYFGVTIKAKLLLFSPKPNMLLEGKVVKLRQESIHIIVLGFASAVITDEDIRDEF 294
           LSGVHPYFGVTIKAKLLLFSPKPNMLLEGKVVKLRQESIH+IVLGFASAVIT EDIRDEF
Sbjct: 61  LSGVHPYFGVTIKAKLLLFSPKPNMLLEGKVVKLRQESIHVIVLGFASAVITYEDIRDEF 120

Query: 295 KHRTKHGEEMFVSRAHKHHVIKVGTMIRFLVKSFDEEILHISGSLVPSHTGSIHWLEKNL 354
           KHRTKHGEEMFVSRAHKHH+IKVGTMIR LVKSFDEEILHISGSLVPSHTGSIHWLEKN 
Sbjct: 121 KHRTKHGEEMFVSRAHKHHIIKVGTMIRLLVKSFDEEILHISGSLVPSHTGSIHWLEKNS 180

Query: 355 VEGSVTNSNKRKMRENEGDV----SIVPDANTLISNND 389
           VEGSVT S KRKMRENEG V    S+  D N +I NND
Sbjct: 181 VEGSVTMS-KRKMRENEGGVTLQDSVGTDVNAVILNND 217

[Close]

BLAST of CaUC11G216150.1 vs. NCBI nr
Match: XP_008466499.1 (PREDICTED: uncharacterized protein LOC103503892 isoform X1 [Cucumis melo] >XP_016903501.1 PREDICTED: uncharacterized protein LOC103503892 isoform X1 [Cucumis melo] >KAA0063270.1 putative DNA-directed RNA polymerase I subunit RPA43 [Cucumis melo var. makuwa] >TYK31504.1 putative DNA-directed RNA polymerase I subunit RPA43 [Cucumis melo var. makuwa])

HSP 1 Score: 374.4 bits (960), Expect = 1.3e-99
Identity = 195/217 (89.86%), Postives = 204/217 (94.01%), Query Frame = 0


Query: 175 MEGLKVSEANMVVYVHPSKSKKVSQAVLRELGAMLLKFDEKFEGVLLAYEAKIIDKNAKI 234
           MEGLKVS+ANMVVYVHPSKSKKVSQAVLRELGAMLLKFDEKFEGVLLAYEAKIIDKNAKI
Sbjct: 1   MEGLKVSDANMVVYVHPSKSKKVSQAVLRELGAMLLKFDEKFEGVLLAYEAKIIDKNAKI 60

Query: 235 LSGVHPYFGVTIKAKLLLFSPKPNMLLEGKVVKLRQESIHIIVLGFASAVITDEDIRDEF 294
           LSGVHPYFGVTIKAKLLLFSPKPNMLLEGKVVKLRQESIH+IVLGFASAVIT EDIRDEF
Sbjct: 61  LSGVHPYFGVTIKAKLLLFSPKPNMLLEGKVVKLRQESIHVIVLGFASAVITYEDIRDEF 120

Query: 295 KHRTKHGEEMFVSRAHKHHVIKVGTMIRFLVKSFDEEILHISGSLVPSHTGSIHWLEKNL 354
           KHRTKHGEEMFVSRAHKHHVIKVGTMIRFLVKSFDEEILHISGSLVPSHTGSIHWLEKN 
Sbjct: 121 KHRTKHGEEMFVSRAHKHHVIKVGTMIRFLVKSFDEEILHISGSLVPSHTGSIHWLEKNS 180

Query: 355 VEGSVTNSNKRKMRENEGDV----SIVPDANTLISNN 388
           VEGSV+ S+K+KMRENEG V    ++  D N +I N+
Sbjct: 181 VEGSVSMSSKKKMRENEGGVMLQDTVGTDVNAVILND 217

[Close]

BLAST of CaUC11G216150.1 vs. ExPASy Swiss-Prot
Match: O43036 (DNA-directed RNA polymerase I subunit rpa43 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rpa43 PE=1 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 2.5e-05
Identity = 38/163 (23.31%), Postives = 82/163 (50.31%), Query Frame = 0


Query: 184 NMVVYVHPSKSKKVSQAVLRELGAMLLKFDEKFEGVLLAYE-AKIIDKNAKILSGVHPYF 243
           ++ + + P  S+    A+   + +M+L    +  G++LAY+  + ++K+AK++    P+ 
Sbjct: 12  DLYLSIAPGHSRDPLNAIQEHMDSMILSKLPRINGIVLAYDNIRFLEKSAKVMYD-SPFS 71

Query: 244 GVTIKAKLLLFSPKPNMLLEGKVVKLRQESIHIIVLGFASAVITDEDI-RDEFKHRTKHG 303
            + ++  +L+FSPK    LEGK+  +    I +++LG  +A I  + I +D         
Sbjct: 72  FIWVRVDVLVFSPKKGDCLEGKINLVSPSHIGLLILGIFNASIPRKSIPKDWIFIEPDTT 131

Query: 304 EEMFVSRAHKHHVIKVGTMIRFLVKSFDEE--ILHISGSLVPS 343
           EE    + +  ++++ G  + F+V     E  +  + G+L  S
Sbjct: 132 EEQGRWKTNDGNILEPGKDLEFVVDGIQREAGLTMVQGTLANS 173

[Close]

BLAST of CaUC11G216150.1 vs. ExPASy TrEMBL
Match: A0A1S4E5I5 (uncharacterized protein LOC103503892 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503892 PE=4 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 6.1e-100
Identity = 195/217 (89.86%), Postives = 204/217 (94.01%), Query Frame = 0


Query: 175 MEGLKVSEANMVVYVHPSKSKKVSQAVLRELGAMLLKFDEKFEGVLLAYEAKIIDKNAKI 234
           MEGLKVS+ANMVVYVHPSKSKKVSQAVLRELGAMLLKFDEKFEGVLLAYEAKIIDKNAKI
Sbjct: 1   MEGLKVSDANMVVYVHPSKSKKVSQAVLRELGAMLLKFDEKFEGVLLAYEAKIIDKNAKI 60

Query: 235 LSGVHPYFGVTIKAKLLLFSPKPNMLLEGKVVKLRQESIHIIVLGFASAVITDEDIRDEF 294
           LSGVHPYFGVTIKAKLLLFSPKPNMLLEGKVVKLRQESIH+IVLGFASAVIT EDIRDEF
Sbjct: 61  LSGVHPYFGVTIKAKLLLFSPKPNMLLEGKVVKLRQESIHVIVLGFASAVITYEDIRDEF 120

Query: 295 KHRTKHGEEMFVSRAHKHHVIKVGTMIRFLVKSFDEEILHISGSLVPSHTGSIHWLEKNL 354
           KHRTKHGEEMFVSRAHKHHVIKVGTMIRFLVKSFDEEILHISGSLVPSHTGSIHWLEKN 
Sbjct: 121 KHRTKHGEEMFVSRAHKHHVIKVGTMIRFLVKSFDEEILHISGSLVPSHTGSIHWLEKNS 180

Query: 355 VEGSVTNSNKRKMRENEGDV----SIVPDANTLISNN 388
           VEGSV+ S+K+KMRENEG V    ++  D N +I N+
Sbjct: 181 VEGSVSMSSKKKMRENEGGVMLQDTVGTDVNAVILND 217

[Close]

BLAST of CaUC11G216150.1 vs. ExPASy TrEMBL
Match: A0A5D3E6A0 (Putative DNA-directed RNA polymerase I subunit RPA43 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G008220 PE=4 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 6.1e-100
Identity = 195/217 (89.86%), Postives = 204/217 (94.01%), Query Frame = 0


Query: 175 MEGLKVSEANMVVYVHPSKSKKVSQAVLRELGAMLLKFDEKFEGVLLAYEAKIIDKNAKI 234
           MEGLKVS+ANMVVYVHPSKSKKVSQAVLRELGAMLLKFDEKFEGVLLAYEAKIIDKNAKI
Sbjct: 1   MEGLKVSDANMVVYVHPSKSKKVSQAVLRELGAMLLKFDEKFEGVLLAYEAKIIDKNAKI 60

Query: 235 LSGVHPYFGVTIKAKLLLFSPKPNMLLEGKVVKLRQESIHIIVLGFASAVITDEDIRDEF 294
           LSGVHPYFGVTIKAKLLLFSPKPNMLLEGKVVKLRQESIH+IVLGFASAVIT EDIRDEF
Sbjct: 61  LSGVHPYFGVTIKAKLLLFSPKPNMLLEGKVVKLRQESIHVIVLGFASAVITYEDIRDEF 120

Query: 295 KHRTKHGEEMFVSRAHKHHVIKVGTMIRFLVKSFDEEILHISGSLVPSHTGSIHWLEKNL 354
           KHRTKHGEEMFVSRAHKHHVIKVGTMIRFLVKSFDEEILHISGSLVPSHTGSIHWLEKN 
Sbjct: 121 KHRTKHGEEMFVSRAHKHHVIKVGTMIRFLVKSFDEEILHISGSLVPSHTGSIHWLEKNS 180

Query: 355 VEGSVTNSNKRKMRENEGDV----SIVPDANTLISNN 388
           VEGSV+ S+K+KMRENEG V    ++  D N +I N+
Sbjct: 181 VEGSVSMSSKKKMRENEGGVMLQDTVGTDVNAVILND 217

[Close]

BLAST of CaUC11G216150.1 vs. ExPASy TrEMBL
Match: A0A0A0LGG8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G866520 PE=4 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 6.1e-100
Identity = 197/218 (90.37%), Postives = 203/218 (93.12%), Query Frame = 0


Query: 175 MEGLKVSEANMVVYVHPSKSKKVSQAVLRELGAMLLKFDEKFEGVLLAYEAKIIDKNAKI 234
           MEGLKVS+ANMVVYVHPSKSKK+SQAVLRELGAMLLKFDEKFEGVLLAYEAKIIDKNAKI
Sbjct: 1   MEGLKVSDANMVVYVHPSKSKKISQAVLRELGAMLLKFDEKFEGVLLAYEAKIIDKNAKI 60

Query: 235 LSGVHPYFGVTIKAKLLLFSPKPNMLLEGKVVKLRQESIHIIVLGFASAVITDEDIRDEF 294
           LSGVHPYFGVTIKAKLLLFSPKPNMLLEGKVVKLRQESIH+IVLGFASAVIT EDIRDEF
Sbjct: 61  LSGVHPYFGVTIKAKLLLFSPKPNMLLEGKVVKLRQESIHVIVLGFASAVITYEDIRDEF 120

Query: 295 KHRTKHGEEMFVSRAHKHHVIKVGTMIRFLVKSFDEEILHISGSLVPSHTGSIHWLEKNL 354
           KHRTKHGEEMFVSRAHKHH+IKVGTMIR LVKSFDEEILHISGSLVPSHTGSIHWLEKN 
Sbjct: 121 KHRTKHGEEMFVSRAHKHHIIKVGTMIRLLVKSFDEEILHISGSLVPSHTGSIHWLEKNS 180

Query: 355 VEGSVTNSNKRKMRENEGDV----SIVPDANTLISNND 389
           VEGSVT S KRKMRENEG V    S+  D N +I NND
Sbjct: 181 VEGSVTMS-KRKMRENEGGVTLQDSVGTDVNAVILNND 217

[Close]

BLAST of CaUC11G216150.1 vs. ExPASy TrEMBL
Match: A0A1S3CRF8 (uncharacterized protein LOC103503892 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103503892 PE=4 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 2.0e-98
Identity = 195/217 (89.86%), Postives = 203/217 (93.55%), Query Frame = 0


Query: 175 MEGLKVSEANMVVYVHPSKSKKVSQAVLRELGAMLLKFDEKFEGVLLAYEAKIIDKNAKI 234
           MEGLKVS+ANMVVYVHPSKSKKVSQAVLRELGAMLLKFDEKFEGVLLAYEAKIIDKNAKI
Sbjct: 1   MEGLKVSDANMVVYVHPSKSKKVSQAVLRELGAMLLKFDEKFEGVLLAYEAKIIDKNAKI 60

Query: 235 LSGVHPYFGVTIKAKLLLFSPKPNMLLEGKVVKLRQESIHIIVLGFASAVITDEDIRDEF 294
           LSGVHPYFGVTIKAKLLLFSPKPNMLLEGKVVKLRQESIH+IVLGFASAVIT EDIRDEF
Sbjct: 61  LSGVHPYFGVTIKAKLLLFSPKPNMLLEGKVVKLRQESIHVIVLGFASAVITYEDIRDEF 120

Query: 295 KHRTKHGEEMFVSRAHKHHVIKVGTMIRFLVKSFDEEILHISGSLVPSHTGSIHWLEKNL 354
           KHRTKHGEEMFVSRAHKHHVIKVGTMIRFLVKSFDEEILHISGSLVPSHTGSIHWLEKN 
Sbjct: 121 KHRTKHGEEMFVSRAHKHHVIKVGTMIRFLVKSFDEEILHISGSLVPSHTGSIHWLEKNS 180

Query: 355 VEGSVTNSNKRKMRENEGDV----SIVPDANTLISNN 388
           VEGSV+ S K+KMRENEG V    ++  D N +I N+
Sbjct: 181 VEGSVSMS-KKKMRENEGGVMLQDTVGTDVNAVILND 216

[Close]

BLAST of CaUC11G216150.1 vs. ExPASy TrEMBL
Match: A0A6J1D5Y9 (uncharacterized protein LOC111016757 OS=Momordica charantia OX=3673 GN=LOC111016757 PE=4 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 1.7e-97
Identity = 186/218 (85.32%), Postives = 201/218 (92.20%), Query Frame = 0


Query: 175 MEGLKVSEANMVVYVHPSKSKKVSQAVLRELGAMLLKFDEKFEGVLLAYEAKIIDKNAKI 234
           MEGLKVS+AN+VVYVHPSKSKKVSQAVLRELGAMLLKFDE+FEGVLLAY+AKI DK+AKI
Sbjct: 1   MEGLKVSDANLVVYVHPSKSKKVSQAVLRELGAMLLKFDERFEGVLLAYDAKITDKSAKI 60

Query: 235 LSGVHPYFGVTIKAKLLLFSPKPNMLLEGKVVKLRQESIHIIVLGFASAVITDEDIRDEF 294
           LSGVHPYFGVT+KAKLLLFSPKPNMLLEGKVVKLRQES+H+IVLGFASA ITDEDIRDEF
Sbjct: 61  LSGVHPYFGVTLKAKLLLFSPKPNMLLEGKVVKLRQESVHVIVLGFASAAITDEDIRDEF 120

Query: 295 KHRTKHGEEMFVSRAHKHHVIKVGTMIRFLVKSFDEEILHISGSLVPSHTGSIHWLEKNL 354
           KHRTKH EEMFVSRAHKHHVIKVGTMIRFLVKSFDEEILHISGSLVPSHTGSIHWLEKN 
Sbjct: 121 KHRTKHEEEMFVSRAHKHHVIKVGTMIRFLVKSFDEEILHISGSLVPSHTGSIHWLEKNS 180

Query: 355 VEGSVTNSNKRKMRENEGDV----SIVPDANTLISNND 389
           +EGSVT+  ++K R+NEG+     S+  D N LI NND
Sbjct: 181 IEGSVTDRRRKKTRDNEGESLLQDSVATDVNALILNND 218

[Close]

BLAST of CaUC11G216150.1 vs. TAIR 10
Match: AT1G75670.1 (DNA-directed RNA polymerases )

HSP 1 Score: 232.6 bits (592), Expect = 5.5e-61
Identity = 106/194 (54.64%), Postives = 152/194 (78.35%), Query Frame = 0


Query: 175 MEGLKVSEANMVVYVHPSKSKKVSQAVLRELGAMLLKFDEKFEGVLLAYEAKIIDKNAKI 234
           MEGLK+SEA +++++HPS+S+ V Q + REL ++L +++E F+GVLLAY+A +  K AKI
Sbjct: 1   MEGLKLSEAELMIFIHPSQSRNVFQGICRELSSLLFQYNETFDGVLLAYDATVKSKQAKI 60

Query: 235 LSGVHPYFGVTIKAKLLLFSPKPNMLLEGKVVKLRQESIHIIVLGFASAVITDEDIRDEF 294
           L+G+HPYFGV +  +LLLF PKP   +EGK+VK+  ESIH+IVLGF++AVITD DIR+EF
Sbjct: 61  LTGLHPYFGVRVNTRLLLFDPKPKSFVEGKIVKISPESIHVIVLGFSAAVITDVDIREEF 120

Query: 295 KHRTKHGEEMFVSRAHKHHVIKVGTMIRFLVKSFDEEILHISGSLVPSHTGSIHWLEKNL 354
           K+R + GE  FVSR+HK H +K+GTM+R  V+SFDEE++HI+GSL+P +TG + WLEK  
Sbjct: 121 KYRVRDGEGSFVSRSHKRHALKLGTMLRLQVQSFDEEVMHIAGSLLPENTGCVKWLEKKS 180

Query: 355 VEGSVTNSNKRKMR 369
            E   T+ + ++ +
Sbjct: 181 EEALPTDRDHKRRK 194

[Close]

BLAST of CaUC11G216150.1 vs. TAIR 10
Match: AT1G75670.2 (DNA-directed RNA polymerases )

HSP 1 Score: 232.6 bits (592), Expect = 5.5e-61
Identity = 106/194 (54.64%), Postives = 152/194 (78.35%), Query Frame = 0


Query: 175 MEGLKVSEANMVVYVHPSKSKKVSQAVLRELGAMLLKFDEKFEGVLLAYEAKIIDKNAKI 234
           MEGLK+SEA +++++HPS+S+ V Q + REL ++L +++E F+GVLLAY+A +  K AKI
Sbjct: 1   MEGLKLSEAELMIFIHPSQSRNVFQGICRELSSLLFQYNETFDGVLLAYDATVKSKQAKI 60

Query: 235 LSGVHPYFGVTIKAKLLLFSPKPNMLLEGKVVKLRQESIHIIVLGFASAVITDEDIRDEF 294
           L+G+HPYFGV +  +LLLF PKP   +EGK+VK+  ESIH+IVLGF++AVITD DIR+EF
Sbjct: 61  LTGLHPYFGVRVNTRLLLFDPKPKSFVEGKIVKISPESIHVIVLGFSAAVITDVDIREEF 120

Query: 295 KHRTKHGEEMFVSRAHKHHVIKVGTMIRFLVKSFDEEILHISGSLVPSHTGSIHWLEKNL 354
           K+R + GE  FVSR+HK H +K+GTM+R  V+SFDEE++HI+GSL+P +TG + WLEK  
Sbjct: 121 KYRVRDGEGSFVSRSHKRHALKLGTMLRLQVQSFDEEVMHIAGSLLPENTGCVKWLEKKS 180

Query: 355 VEGSVTNSNKRKMR 369
            E   T+ + ++ +
Sbjct: 181 EEALPTDRDHKRRK 194

The following BLAST results are available for this feature:

BLAST of CaUC11G216150.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889707.1	2.1e-102	91.12	uncharacterized protein LOC120079556 isoform X1 [Benincasa hispida] >XP_03888970...	[more]
XP_038889709.1	5.1e-101	91.12	uncharacterized protein LOC120079556 isoform X2 [Benincasa hispida]	[more]
XP_038898978.1	9.6e-100	88.53	uncharacterized protein LOC120086413 isoform X3 [Benincasa hispida]	[more]
XP_011652444.1	1.3e-99	90.37	uncharacterized protein LOC101216589 [Cucumis sativus] >XP_031737671.1 uncharact...	[more]
XP_008466499.1	1.3e-99	89.86	PREDICTED: uncharacterized protein LOC103503892 isoform X1 [Cucumis melo] >XP_01...	[more]

BLAST of CaUC11G216150.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O43036	2.5e-05	23.31	DNA-directed RNA polymerase I subunit rpa43 OS=Schizosaccharomyces pombe (strain...	[more]

BLAST of CaUC11G216150.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4E5I5	6.1e-100	89.86	uncharacterized protein LOC103503892 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5D3E6A0	6.1e-100	89.86	Putative DNA-directed RNA polymerase I subunit RPA43 OS=Cucumis melo var. makuwa...	[more]
A0A0A0LGG8	6.1e-100	90.37	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G866520 PE=4 SV=1	[more]
A0A1S3CRF8	2.0e-98	89.86	uncharacterized protein LOC103503892 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1D5Y9	1.7e-97	85.32	uncharacterized protein LOC111016757 OS=Momordica charantia OX=3673 GN=LOC111016...	[more]

BLAST of CaUC11G216150.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G75670.1	5.5e-61	54.64	DNA-directed RNA polymerases	[more]
AT1G75670.2	5.5e-61	54.64	DNA-directed RNA polymerases	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036898	RNA polymerase Rpb7-like, N-terminal domain superfamily	GENE3D	3.30.1490.120		coord: 173..257 e-value: 9.6E-7 score: 30.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	PANTHER	PTHR12709:SF5	DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA43	coord: 172..367
IPR045113	RNA polymerase Rpb7-like	PANTHER	PTHR12709	DNA-DIRECTED RNA POLYMERASE II, III	coord: 172..367

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CaUC11G216150	CaUC11G216150	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CaUC11G216150.1-exon	CaUC11G216150.1-exon-Ciama_Chr11:29581601..29581657	exon
CaUC11G216150.1-exon	CaUC11G216150.1-exon-Ciama_Chr11:29585621..29585698	exon
CaUC11G216150.1-exon	CaUC11G216150.1-exon-Ciama_Chr11:29585802..29585895	exon
CaUC11G216150.1-exon	CaUC11G216150.1-exon-Ciama_Chr11:29586025..29586100	exon
CaUC11G216150.1-exon	CaUC11G216150.1-exon-Ciama_Chr11:29586194..29586259	exon
CaUC11G216150.1-exon	CaUC11G216150.1-exon-Ciama_Chr11:29586484..29586551	exon
CaUC11G216150.1-exon	CaUC11G216150.1-exon-Ciama_Chr11:29586830..29587022	exon
CaUC11G216150.1-exon	CaUC11G216150.1-exon-Ciama_Chr11:29587790..29587941	exon
CaUC11G216150.1-exon	CaUC11G216150.1-exon-Ciama_Chr11:29588140..29588249	exon
CaUC11G216150.1-exon	CaUC11G216150.1-exon-Ciama_Chr11:29588361..29588446	exon
CaUC11G216150.1-exon	CaUC11G216150.1-exon-Ciama_Chr11:29588746..29588850	exon
CaUC11G216150.1-exon	CaUC11G216150.1-exon-Ciama_Chr11:29588931..29589010	exon
CaUC11G216150.1-exon	CaUC11G216150.1-exon-Ciama_Chr11:29589081..29589096	exon
CaUC11G216150.1-exon	CaUC11G216150.1-exon-Ciama_Chr11:29589216..29589270	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CaUC11G216150.1-cds	CaUC11G216150.1-cds-Ciama_Chr11:29581601..29581657	CDS
CaUC11G216150.1-cds	CaUC11G216150.1-cds-Ciama_Chr11:29585621..29585698	CDS
CaUC11G216150.1-cds	CaUC11G216150.1-cds-Ciama_Chr11:29585802..29585895	CDS
CaUC11G216150.1-cds	CaUC11G216150.1-cds-Ciama_Chr11:29586025..29586100	CDS
CaUC11G216150.1-cds	CaUC11G216150.1-cds-Ciama_Chr11:29586194..29586259	CDS
CaUC11G216150.1-cds	CaUC11G216150.1-cds-Ciama_Chr11:29586484..29586551	CDS
CaUC11G216150.1-cds	CaUC11G216150.1-cds-Ciama_Chr11:29586830..29587022	CDS
CaUC11G216150.1-cds	CaUC11G216150.1-cds-Ciama_Chr11:29587790..29587941	CDS
CaUC11G216150.1-cds	CaUC11G216150.1-cds-Ciama_Chr11:29588140..29588249	CDS
CaUC11G216150.1-cds	CaUC11G216150.1-cds-Ciama_Chr11:29588361..29588446	CDS
CaUC11G216150.1-cds	CaUC11G216150.1-cds-Ciama_Chr11:29588746..29588850	CDS
CaUC11G216150.1-cds	CaUC11G216150.1-cds-Ciama_Chr11:29588931..29589010	CDS
CaUC11G216150.1-cds	CaUC11G216150.1-cds-Ciama_Chr11:29589081..29589096	CDS
CaUC11G216150.1-cds	CaUC11G216150.1-cds-Ciama_Chr11:29589216..29589270	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CaUC11G216150.1	CaUC11G216150.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006352	DNA-templated transcription, initiation
cellular_component	GO:0005736	RNA polymerase I complex
molecular_function	GO:0003899	DNA-directed 5'-3' RNA polymerase activity