CaUC11G206710.1 (mRNA) Watermelon (USVL246-FR2) v1

Overview
NameCaUC11G206710.1
TypemRNA
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
LocationCiama_Chr11: 6418843 .. 6419940 (+)
Sequence length225
RNA-Seq ExpressionCaUC11G206710.1
SyntenyCaUC11G206710.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGTCATGCAGGTTATAATACATAGTATATGTGAGGTTTATTTGTACATTTTGTTTTCCATTTCAAATATATGTGAGTTTATTTCAAATAATATGAAGATATCATTTATCTTAATATAACAAACATGTGTATATATGACAAAATATGCAGAATATATAACTCAATTTCAAATATATACATGTGTATACATGACAATGTAATTACATTCGTGAAATATACTATTAAAAACTAGTTACATATGAAAATATTTTTAAAAAATAGCACACAATATATATGAAGAAACACAATGCATATTATGGTACAAGATTGAACAATTAATATAACATAGTATATATTGATAAAACAAAAATCAATAAAAATATACTTTGTATAATATTACATAAACGCATAATACAATTCAAAACACATAAAGAGTAAACCTATTTTATTCATAAATTGAAGCGATAATTATGAAAGACTAAAAAAATACTCATTAAATAATATGCCAACATTAATTATAATATGTACAACATTAATTGTGAAAGAACCAATTTTATAAGGTCTAAATGAATTTTAGATGATTATTTATGATATATTAAATTATAAAAAATTGAAATTTTAATCGGAGAGACCATGAGGCTTAAGGTTAAATTTGTTTGAAAATTAAGCCAAAATCTTGAAATATTTTCCAATTTTAGAATATTCGTAAAATAAAGTTTGTGAAGGTTAAATCTCTAAAACTTACATGTTTCTATTAAGTCAAAGCCCAATGGGCTCTAGGCTTGTAGTATTTAGGTTTGTTATTGTTTTGGAAACCTAATACGAGACCGAAACTCTCGGAGAGAGCAAGAGGCTGAGAGGGAGGGGTTTCGGGATAAAAGATGGAGTCGCAGAGCTTGACGGTAACAGGTTTGCTGATCTTTTGGAAGTAGAAATCGTTCCTTACAATTTGTTCTCCTTCGCCGGCGTCTTCTAATGGAATCAAGGTTGAAGGTCGGGAATCAACGGAAGCCATGAATTGCAAAAGGCTTCTCTCTGAAGCGAGAGAGAAGCTCTGTAGAAGGTTTTCGGAAGCAACCGATGTTGTTCCACCTGGGGTTTTAGGAACATTGTAG

mRNA sequence

ATGAAAGTCATGCAGAATATTCGTAAAATAAAGTTTGTGAAGAAATCGTTCCTTACAATTTGTTCTCCTTCGCCGGCGTCTTCTAATGGAATCAAGGTTGAAGGTCGGGAATCAACGGAAGCCATGAATTGCAAAAGGCTTCTCTCTGAAGCGAGAGAGAAGCTCTGTAGAAGGTTTTCGGAAGCAACCGATGTTGTTCCACCTGGGGTTTTAGGAACATTGTAG

Coding sequence (CDS)

ATGAAAGTCATGCAGAATATTCGTAAAATAAAGTTTGTGAAGAAATCGTTCCTTACAATTTGTTCTCCTTCGCCGGCGTCTTCTAATGGAATCAAGGTTGAAGGTCGGGAATCAACGGAAGCCATGAATTGCAAAAGGCTTCTCTCTGAAGCGAGAGAGAAGCTCTGTAGAAGGTTTTCGGAAGCAACCGATGTTGTTCCACCTGGGGTTTTAGGAACATTGTAG

Protein sequence

MKVMQNIRKIKFVKKSFLTICSPSPASSNGIKVEGRESTEAMNCKRLLSEAREKLCRRFSEATDVVPPGVLGTL
Homology
The following BLAST results are available for this feature:
BLAST of CaUC11G206710.1 vs.
Match NameE-valueIdentityDescription
BLAST of CaUC11G206710.1 vs.
Match NameE-valueIdentityDescription
BLAST of CaUC11G206710.1 vs.
Match NameE-valueIdentityDescription
BLAST of CaUC11G206710.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CaUC11G206710CaUC11G206710gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CaUC11G206710.1-exonCaUC11G206710.1-exon-Ciama_Chr11:6418843..6418857exon
CaUC11G206710.1-exonCaUC11G206710.1-exon-Ciama_Chr11:6419524..6419550exon
CaUC11G206710.1-exonCaUC11G206710.1-exon-Ciama_Chr11:6419758..6419940exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CaUC11G206710.1-cdsCaUC11G206710.1-cds-Ciama_Chr11:6418843..6418857CDS
CaUC11G206710.1-cdsCaUC11G206710.1-cds-Ciama_Chr11:6419524..6419550CDS
CaUC11G206710.1-cdsCaUC11G206710.1-cds-Ciama_Chr11:6419758..6419940CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CaUC11G206710.1CaUC11G206710.1-proteinpolypeptide