CaUC10G188720.1 (mRNA) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC10G188720.1
Type	mRNA
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Epoxide hydrolase
Location	Ciama_Chr10: 21540689 .. 21540991 (+)
Sequence length	303
RNA-Seq Expression	CaUC10G188720.1
Synteny	CaUC10G188720.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTTGTTGCAGAACTTGGGAGGTGACTGCATTGAGGGCGAAAGCACAGGTCCGAGTGCCGGTGAAGTTCATCGTCGGGGATTTAGATCTGACCTACCATGTTCCAGGAGTCAAGGAATATTATATCCACAATGGTGGATTCAAGAAGGACGTGCCGTTTCTGGAGGAAGTGGTTGTAATGAAAGATAGTGCACCCACTTCATCAACCAAGAAAGGCCACGTGAAATCAATACTCACATCCATGACTTTTTATCAAAAAATTCTGAACTTCATCCCATTCTCCCTTGCTGTTACTTTCTGA

mRNA sequence

ATGTTTTGTTGCAGAACTTGGGAGGTGACTGCATTGAGGGCGAAAGCACAGGTCCGAGTGCCGGTGAAGTTCATCGTCGGGGATTTAGATCTGACCTACCATGTTCCAGGAGTCAAGGAATATTATATCCACAATGGTGGATTCAAGAAGGACGTGCCGTTTCTGGAGGAAGTGGTTGTAATGAAAGATAGTGCACCCACTTCATCAACCAAGAAAGGCCACGTGAAATCAATACTCACATCCATGACTTTTTATCAAAAAATTCTGAACTTCATCCCATTCTCCCTTGCTGTTACTTTCTGA

Coding sequence (CDS)

ATGTTTTGTTGCAGAACTTGGGAGGTGACTGCATTGAGGGCGAAAGCACAGGTCCGAGTGCCGGTGAAGTTCATCGTCGGGGATTTAGATCTGACCTACCATGTTCCAGGAGTCAAGGAATATTATATCCACAATGGTGGATTCAAGAAGGACGTGCCGTTTCTGGAGGAAGTGGTTGTAATGAAAGATAGTGCACCCACTTCATCAACCAAGAAAGGCCACGTGAAATCAATACTCACATCCATGACTTTTTATCAAAAAATTCTGAACTTCATCCCATTCTCCCTTGCTGTTACTTTCTGA

Protein sequence

MFCCRTWEVTALRAKAQVRVPVKFIVGDLDLTYHVPGVKEYYIHNGGFKKDVPFLEEVVVMKDSAPTSSTKKGHVKSILTSMTFYQKILNFIPFSLAVTF

Homology

[Close]

BLAST of CaUC10G188720.1 vs. NCBI nr
Match: XP_023528763.1 (uncharacterized protein LOC111791601 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 104.8 bits (260), Expect = 4.5e-19
Identity = 51/69 (73.91%), Postives = 57/69 (82.61%), Query Frame = 0


Query: 6   TWEVTALRAKAQVRVPVKFIVGDLDLTYHVPGVKEYYIHNGGFKKDVPFLEEVVVMKDSA 65
           TWE+TA   KAQVRVPVKFIVGDLDLTY  PG KE YIHNGGFKKDVPFLEEV+VMKD+A
Sbjct: 236 TWELTASWTKAQVRVPVKFIVGDLDLTYQFPGAKE-YIHNGGFKKDVPFLEEVIVMKDTA 295

Query: 66  PTSSTKKGH 75
              + ++ H
Sbjct: 296 HFINQERPH 303

[Close]

BLAST of CaUC10G188720.1 vs. NCBI nr
Match: XP_022934345.1 (uncharacterized protein LOC111441538 [Cucurbita moschata] >KAG6581272.1 hypothetical protein SDJN03_21274, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017999.1 ephA [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 104.4 bits (259), Expect = 5.9e-19
Identity = 50/69 (72.46%), Postives = 57/69 (82.61%), Query Frame = 0


Query: 6   TWEVTALRAKAQVRVPVKFIVGDLDLTYHVPGVKEYYIHNGGFKKDVPFLEEVVVMKDSA 65
           TWE+TA   KAQVRVPVKFI+GDLDLTY  PG KE YIHNGGFKKDVPFLEEV+VMKD+A
Sbjct: 236 TWELTASWTKAQVRVPVKFIIGDLDLTYQFPGAKE-YIHNGGFKKDVPFLEEVIVMKDTA 295

Query: 66  PTSSTKKGH 75
              + ++ H
Sbjct: 296 HFINQERPH 303

[Close]

BLAST of CaUC10G188720.1 vs. NCBI nr
Match: XP_022984060.1 (uncharacterized protein LOC111482484 [Cucurbita maxima])

HSP 1 Score: 103.6 bits (257), Expect = 1.0e-18
Identity = 50/69 (72.46%), Postives = 57/69 (82.61%), Query Frame = 0


Query: 6   TWEVTALRAKAQVRVPVKFIVGDLDLTYHVPGVKEYYIHNGGFKKDVPFLEEVVVMKDSA 65
           TWE+TA   KAQVRVPVKFIVGDLDLTY  PG KE YIHNGGFKKDVPFLEEV++MKD+A
Sbjct: 236 TWELTASWTKAQVRVPVKFIVGDLDLTYQFPGAKE-YIHNGGFKKDVPFLEEVILMKDTA 295

Query: 66  PTSSTKKGH 75
              + ++ H
Sbjct: 296 HFINQERPH 303

[Close]

BLAST of CaUC10G188720.1 vs. NCBI nr
Match: XP_008454330.1 (PREDICTED: bifunctional epoxide hydrolase 2-like [Cucumis melo] >TYK29511.1 bifunctional epoxide hydrolase 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 102.1 bits (253), Expect = 2.9e-18
Identity = 50/69 (72.46%), Postives = 57/69 (82.61%), Query Frame = 0


Query: 6   TWEVTALRAKAQVRVPVKFIVGDLDLTYHVPGVKEYYIHNGGFKKDVPFLEEVVVMKDSA 65
           TWE+TA   KAQV+VPVKFIVGDLDLTYH PG KE YIHNGGFK DVPFLEEVVVM+D+A
Sbjct: 236 TWELTASWNKAQVQVPVKFIVGDLDLTYHFPGAKE-YIHNGGFKTDVPFLEEVVVMEDTA 295

Query: 66  PTSSTKKGH 75
              + ++ H
Sbjct: 296 HFINQERPH 303

[Close]

BLAST of CaUC10G188720.1 vs. NCBI nr
Match: KAA0044383.1 (bifunctional epoxide hydrolase 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 100.5 bits (249), Expect = 8.5e-18
Identity = 49/69 (71.01%), Postives = 57/69 (82.61%), Query Frame = 0


Query: 6   TWEVTALRAKAQVRVPVKFIVGDLDLTYHVPGVKEYYIHNGGFKKDVPFLEEVVVMKDSA 65
           TWE++A   KAQV+VPVKFIVGDLDLTYH PG KE YIHNGGFK DVPFLEEVVVM+D+A
Sbjct: 236 TWELSASWNKAQVQVPVKFIVGDLDLTYHFPGAKE-YIHNGGFKTDVPFLEEVVVMEDTA 295

Query: 66  PTSSTKKGH 75
              + ++ H
Sbjct: 296 HFINQERPH 303

[Close]

BLAST of CaUC10G188720.1 vs. ExPASy TrEMBL
Match: A0A6J1F7F3 (uncharacterized protein LOC111441538 OS=Cucurbita moschata OX=3662 GN=LOC111441538 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 2.9e-19
Identity = 50/69 (72.46%), Postives = 57/69 (82.61%), Query Frame = 0


Query: 6   TWEVTALRAKAQVRVPVKFIVGDLDLTYHVPGVKEYYIHNGGFKKDVPFLEEVVVMKDSA 65
           TWE+TA   KAQVRVPVKFI+GDLDLTY  PG KE YIHNGGFKKDVPFLEEV+VMKD+A
Sbjct: 236 TWELTASWTKAQVRVPVKFIIGDLDLTYQFPGAKE-YIHNGGFKKDVPFLEEVIVMKDTA 295

Query: 66  PTSSTKKGH 75
              + ++ H
Sbjct: 296 HFINQERPH 303

[Close]

BLAST of CaUC10G188720.1 vs. ExPASy TrEMBL
Match: A0A6J1J7M9 (uncharacterized protein LOC111482484 OS=Cucurbita maxima OX=3661 GN=LOC111482484 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 4.9e-19
Identity = 50/69 (72.46%), Postives = 57/69 (82.61%), Query Frame = 0


Query: 6   TWEVTALRAKAQVRVPVKFIVGDLDLTYHVPGVKEYYIHNGGFKKDVPFLEEVVVMKDSA 65
           TWE+TA   KAQVRVPVKFIVGDLDLTY  PG KE YIHNGGFKKDVPFLEEV++MKD+A
Sbjct: 236 TWELTASWTKAQVRVPVKFIVGDLDLTYQFPGAKE-YIHNGGFKKDVPFLEEVILMKDTA 295

Query: 66  PTSSTKKGH 75
              + ++ H
Sbjct: 296 HFINQERPH 303

[Close]

BLAST of CaUC10G188720.1 vs. ExPASy TrEMBL
Match: A0A5D3E1N5 (Bifunctional epoxide hydrolase 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G001130 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 1.4e-18
Identity = 50/69 (72.46%), Postives = 57/69 (82.61%), Query Frame = 0


Query: 6   TWEVTALRAKAQVRVPVKFIVGDLDLTYHVPGVKEYYIHNGGFKKDVPFLEEVVVMKDSA 65
           TWE+TA   KAQV+VPVKFIVGDLDLTYH PG KE YIHNGGFK DVPFLEEVVVM+D+A
Sbjct: 236 TWELTASWNKAQVQVPVKFIVGDLDLTYHFPGAKE-YIHNGGFKTDVPFLEEVVVMEDTA 295

Query: 66  PTSSTKKGH 75
              + ++ H
Sbjct: 296 HFINQERPH 303

[Close]

BLAST of CaUC10G188720.1 vs. ExPASy TrEMBL
Match: A0A1S3BXV2 (bifunctional epoxide hydrolase 2-like OS=Cucumis melo OX=3656 GN=LOC103494764 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 1.4e-18
Identity = 50/69 (72.46%), Postives = 57/69 (82.61%), Query Frame = 0


Query: 6   TWEVTALRAKAQVRVPVKFIVGDLDLTYHVPGVKEYYIHNGGFKKDVPFLEEVVVMKDSA 65
           TWE+TA   KAQV+VPVKFIVGDLDLTYH PG KE YIHNGGFK DVPFLEEVVVM+D+A
Sbjct: 236 TWELTASWNKAQVQVPVKFIVGDLDLTYHFPGAKE-YIHNGGFKTDVPFLEEVVVMEDTA 295

Query: 66  PTSSTKKGH 75
              + ++ H
Sbjct: 296 HFINQERPH 303

[Close]

BLAST of CaUC10G188720.1 vs. ExPASy TrEMBL
Match: A0A5A7TLI9 (Bifunctional epoxide hydrolase 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G001110 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 4.1e-18
Identity = 49/69 (71.01%), Postives = 57/69 (82.61%), Query Frame = 0


Query: 6   TWEVTALRAKAQVRVPVKFIVGDLDLTYHVPGVKEYYIHNGGFKKDVPFLEEVVVMKDSA 65
           TWE++A   KAQV+VPVKFIVGDLDLTYH PG KE YIHNGGFK DVPFLEEVVVM+D+A
Sbjct: 236 TWELSASWNKAQVQVPVKFIVGDLDLTYHFPGAKE-YIHNGGFKTDVPFLEEVVVMEDTA 295

Query: 66  PTSSTKKGH 75
              + ++ H
Sbjct: 296 HFINQERPH 303

[Close]

BLAST of CaUC10G188720.1 vs. TAIR 10
Match: AT4G02340.1 (alpha/beta-Hydrolases superfamily protein )

HSP 1 Score: 82.8 bits (203), Expect = 1.7e-16
Identity = 38/57 (66.67%), Postives = 47/57 (82.46%), Query Frame = 0


Query: 6   TWEVTALRAKAQVRVPVKFIVGDLDLTYHVPGVKEYYIHNGGFKKDVPFLEEVVVMK 63
           +WE+TA     Q++VPVKFIVGDLD+TY++PG KE YIH GG KK VPFL+EVVVM+
Sbjct: 236 SWELTAPWTGLQIKVPVKFIVGDLDITYNIPGTKE-YIHEGGLKKHVPFLQEVVVME 291

[Close]

BLAST of CaUC10G188720.1 vs. TAIR 10
Match: AT4G15960.1 (alpha/beta-Hydrolases superfamily protein )

HSP 1 Score: 80.1 bits (196), Expect = 1.1e-15
Identity = 37/58 (63.79%), Postives = 46/58 (79.31%), Query Frame = 0


Query: 5   RTWEVTALRAKAQVRVPVKFIVGDLDLTYHVPGVKEYYIHNGGFKKDVPFLEEVVVMK 63
           R WE+TA    A++RVPVKFI+GD DLTY+ PG KE YI+ GGFK+DVP L+E VV+K
Sbjct: 293 RNWELTAPWTGAKIRVPVKFIIGDQDLTYNFPGAKE-YINGGGFKRDVPLLDETVVLK 349

[Close]

BLAST of CaUC10G188720.1 vs. TAIR 10
Match: AT4G15955.3 (alpha/beta-Hydrolases superfamily protein )

HSP 1 Score: 79.0 bits (193), Expect = 2.5e-15
Identity = 36/58 (62.07%), Postives = 46/58 (79.31%), Query Frame = 0


Query: 5   RTWEVTALRAKAQVRVPVKFIVGDLDLTYHVPGVKEYYIHNGGFKKDVPFLEEVVVMK 63
           RTWE+    + A+V+VPVKFI+GD DLTYH+PG K+ YIH+G FK  VP L+EVVV+K
Sbjct: 223 RTWELMGSLSNAKVKVPVKFIIGDQDLTYHIPGSKK-YIHDGRFKSHVPLLDEVVVIK 279

[Close]

BLAST of CaUC10G188720.1 vs. TAIR 10
Match: AT3G05600.1 (alpha/beta-Hydrolases superfamily protein )

HSP 1 Score: 72.4 bits (176), Expect = 2.3e-13
Identity = 35/81 (43.21%), Postives = 51/81 (62.96%), Query Frame = 0


Query: 7   WEVTALRAKAQVRVPVKFIVGDLDLTYHVPGVKEYYIHNGGFKKDVPFLEEVVVMKDSAP 66
           WE+TA    A+++VPVKF+ GD D+ Y  PG+KE YIH GGF  DVP L+E+VV++D+  
Sbjct: 245 WELTAPWTGAKIQVPVKFMTGDFDMVYTTPGMKE-YIHGGGFAADVPTLQEIVVIEDAGH 304

Query: 67  TSSTKK-----GHVKSILTSM 83
             + +K      H+    T +
Sbjct: 305 FVNQEKPQEVTAHINDFFTKL 324

[Close]

BLAST of CaUC10G188720.1 vs. TAIR 10
Match: AT2G26740.1 (soluble epoxide hydrolase )

HSP 1 Score: 63.9 bits (154), Expect = 8.2e-11
Identity = 29/50 (58.00%), Postives = 40/50 (80.00%), Query Frame = 0


Query: 16  AQVRVPVKFIVGDLDLTYHVPGVKEYYIHNGGFKKDVPFLEEVVVMKDSA 66
           ++++VP KF++G+LDL Y++PGVKE YIH   FK+DVP LEE VVM+  A
Sbjct: 251 SKIQVPTKFVIGELDLVYYMPGVKE-YIHGPQFKEDVPLLEEPVVMEGVA 299

The following BLAST results are available for this feature:

BLAST of CaUC10G188720.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023528763.1	4.5e-19	73.91	uncharacterized protein LOC111791601 [Cucurbita pepo subsp. pepo]	[more]
XP_022934345.1	5.9e-19	72.46	uncharacterized protein LOC111441538 [Cucurbita moschata] >KAG6581272.1 hypothet...	[more]
XP_022984060.1	1.0e-18	72.46	uncharacterized protein LOC111482484 [Cucurbita maxima]	[more]
XP_008454330.1	2.9e-18	72.46	PREDICTED: bifunctional epoxide hydrolase 2-like [Cucumis melo] >TYK29511.1 bifu...	[more]
KAA0044383.1	8.5e-18	71.01	bifunctional epoxide hydrolase 2-like [Cucumis melo var. makuwa]	[more]

BLAST of CaUC10G188720.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CaUC10G188720.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F7F3	2.9e-19	72.46	uncharacterized protein LOC111441538 OS=Cucurbita moschata OX=3662 GN=LOC1114415...	[more]
A0A6J1J7M9	4.9e-19	72.46	uncharacterized protein LOC111482484 OS=Cucurbita maxima OX=3661 GN=LOC111482484...	[more]
A0A5D3E1N5	1.4e-18	72.46	Bifunctional epoxide hydrolase 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3BXV2	1.4e-18	72.46	bifunctional epoxide hydrolase 2-like OS=Cucumis melo OX=3656 GN=LOC103494764 PE...	[more]
A0A5A7TLI9	4.1e-18	71.01	Bifunctional epoxide hydrolase 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]

BLAST of CaUC10G188720.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G02340.1	1.7e-16	66.67	alpha/beta-Hydrolases superfamily protein	[more]
AT4G15960.1	1.1e-15	63.79	alpha/beta-Hydrolases superfamily protein	[more]
AT4G15955.3	2.5e-15	62.07	alpha/beta-Hydrolases superfamily protein	[more]
AT3G05600.1	2.3e-13	43.21	alpha/beta-Hydrolases superfamily protein	[more]
AT2G26740.1	8.2e-11	58.00	soluble epoxide hydrolase	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029058	Alpha/Beta hydrolase fold	GENE3D	3.40.50.1820	alpha/beta hydrolase	coord: 2..65 e-value: 2.0E-6 score: 29.7
None	No IPR available	PANTHER	PTHR43329	EPOXIDE HYDROLASE	coord: 6..71
None	No IPR available	PANTHER	PTHR43329:SF98	SUBFAMILY NOT NAMED	coord: 6..71

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CaUC10G188720	CaUC10G188720	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CaUC10G188720.1-exon	CaUC10G188720.1-exon-Ciama_Chr10:21540689..21540991	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CaUC10G188720.1-cds	CaUC10G188720.1-cds-Ciama_Chr10:21540689..21540991	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CaUC10G188720.1	CaUC10G188720.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0018108	peptidyl-tyrosine phosphorylation
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0004715	non-membrane spanning protein tyrosine kinase activity