CaUC10G188640.1 (mRNA) Watermelon (USVL246-FR2) v1

Overview
NameCaUC10G188640.1
TypemRNA
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionLYR motif protein
LocationCiama_Chr10: 21407015 .. 21409724 (+)
Sequence length810
RNA-Seq ExpressionCaUC10G188640.1
SyntenyCaUC10G188640.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTCGCAGAGCCCTAGATTCCCGCCAATCCATTGACTCCTGTACTCTCAAGCTCCATGCTTGGAGCCCTTTCCACCTCCCCAAAACCCTAGATTCCGACACCCATTCCTCCGCTCCCACTAACCCTAAACCCTACTACTCTTCCACTCCTCTCCACACCAAGCGCCCTTGTCTCTCCGATCGAACTACCTCTTTCAATGTCGACGCCATTGACATGTCCGCCCTCAGTTTGATTGACGACGACAAACCTTCTATTGCCGCTGGCTGTTACACCCGTCGCAGCTTCCGATTGATTGCTAGGAAGCGCCGCCGGCGTGGATCTAGGTCTGTTTCTGGGCGGAGTAGTGATCGGAGTGGGACCAGACGGTGCTGCTCTGTTGGGGCTTCGGCGGCTCATGGGACTTGCTCGGATTTCCCTCTCGCGGTTGGGACTGATTCGAGTGGGGAGTTGTTTGTGAATGGAGATGCCAATTGGTCGTCGGATGTGAGTGAAGCGAAGAATTCGAGGAGGGAGAGAGAAGAAAAGGATCATTTGGGTTCTGGGTTTGGTTCTTCTAATGGGGGTTTTGATGCTCAGGGGAATGAGTCTGGATATGGTAGTGAGCCTGGTTATCGTGGTGATGCTGAATTTGGATATGGTGATGAGATTGATGAGGAGGATGAGGATGCCAGATTGCTTCTGTGGGGTGAGCGACTAGGAGGTTCGTTTCCTTCCTCTTCTTCTTCTCACCACAATAGTTAATCACATCGATGGGTTAGACTAGACTACAATTTTAGTTTTGAATGTTGATGTTAGCCTGATAATTTAGGACAATGCTGTTATGACAGTTGCTAAATACCTCCTTAGACACTTGTTTTTAGTACAACAAATCTTGGGGACAAGGATTTGGACCTCTAACTTTAGGAGGAGTATGTGCCAACTACCGCTAAACATGTTAAGCCTAAGAAATGGACATATGAGTTTCTAAAACATATATTTATGGTTAAATTGTACCAATACCATAAACTTTAAGTTACGTTTCTATTATTATTCATTTGTACCTTTGAATTTTAAAATTGTTCCAAAGAATAGATGTGAAATTGTTCAAAAATATCTATTTTTCCCTAATAAACGATGGAAGTTAATTTACTTGATGTCACATATGCCATTTGTGTTATGAATATACATATATGTTATAAAAAACAAAATAATTTAACGTATATGTATAGAAAAGTTCATATATTTTTATATCTACCATGCCGTGTCCCAGATTTTTAAAAGGCGATGTTCATCCATGCATCCATGTCTATCCAACTTCTTTGATTTTGAGATTTTTTTTTTAGCTAATCCTTAAATTTGAAATGTTAACTTTGAGTTTGACTTCCACGGTTTCTGATATCTTATTGACTTAAGATAGATCTTTTATCAGTTTGTTTTGAAATGATAAACAAAACGTAGGGAAGAAGTGTAGGAGTTCGATACACTAGTAAAAAGAGGAATATTGGACAGTCATCTTATTGTCTGGTTATAGCCGATGGTTGTCTAACATGTCACTTCAACATTTAGCTAAGGATGTTTACAATAAGAGCTATTCAAATATAGAAATGTAATAAAAAAAAATTTGAACTTTAGAAACTAATGTTGTAATTTAACGGAGCATGCTTTTGAGGGTTTATATAAAACGTTTTGTTTTGTGGGGAAAGCTTATGGTTGAGCGATTTATAGCACCTTGATGGACAAGGTTCATGGCAGCTTCTAGGTTATAACCATCTTGTGAAACATGTCCATTTATTTTGTGGAGCATGATGTACATCTGAATTGAGTAGCTTTTTGAACCTTTGATCTGACATTTAGCATTCTATGGTCTGAAAGCTATATGCCTCCTAATTCATAGAGGTTAATAGAGGTTCTTACTTTGATCTGATATTTTGTTAGCTTGAAAAGAGTTAATAGAGGTTCTTACTCCACGGCACTCTATGTTTCACCTTTGGATGTCAACGAAAGCTTCATCTCTAATGACATTAAATTGTGTTGTTTTCTTTTTCTAGTTCTGTTGGTGGATTTGTTTAGAAAGGTTGCACAACGTGTGATAAAAAATTGTGCTGTCCTTTGTGCTTAAGATCAAATAACCTCGAGAACAACTATTTTGGGACTGGCTCCAGAATAGGTGTTAGAAATGGATGATTTGTGGATGTAGTATTTTTATTACATTCGGTTTTGAATATGAATTTTATCTTATCTAGCCATTTATATCATCGTTAACTTTTCATCTATGCTTTTGGTTATGACAACTTTAGGCAATTTATGTCCTAGAGAAATTTTCATTGAAAGATGAGAACATAAGTTATCATAGAAAATCCAGCAGACCCCCTCCATAAATGACTCTTTGCTATTGGTAGAACTTAACAAGTTCATTTACCTGTCTTCTTCCTTAAATGACTGTCTCCTGTTTAATCTGCATTTCCTGCCTTCCTTTTGCCCAAAAATGACCTCTGGCATATCAATGACCAATGAGAAGATTAAACGTTTGATTCCGAGTTTCTGATATGCACATACAGTCCCCTTTTTCTGGTTCAAAATCCAAGTTGAACAAATGACTGATATGATCACATTCTTTGCAGATGCTAGAATGGAAATTGTAGGAGAGAACACATTTGCAGATCAGAAATCACACCATAGATGTCGTCGTAAGAAGCACGAATGTAGAATGGTTGATGCCCTGAGGTGA

mRNA sequence

ATGTCTCGCAGAGCCCTAGATTCCCGCCAATCCATTGACTCCTGTACTCTCAAGCTCCATGCTTGGAGCCCTTTCCACCTCCCCAAAACCCTAGATTCCGACACCCATTCCTCCGCTCCCACTAACCCTAAACCCTACTACTCTTCCACTCCTCTCCACACCAAGCGCCCTTGTCTCTCCGATCGAACTACCTCTTTCAATGTCGACGCCATTGACATGTCCGCCCTCAGTTTGATTGACGACGACAAACCTTCTATTGCCGCTGGCTGTTACACCCGTCGCAGCTTCCGATTGATTGCTAGGAAGCGCCGCCGGCGTGGATCTAGGTCTGTTTCTGGGCGGAGTAGTGATCGGAGTGGGACCAGACGGTGCTGCTCTGTTGGGGCTTCGGCGGCTCATGGGACTTGCTCGGATTTCCCTCTCGCGGTTGGGACTGATTCGAGTGGGGAGTTGTTTGTGAATGGAGATGCCAATTGGTCGTCGGATGTGAGTGAAGCGAAGAATTCGAGGAGGGAGAGAGAAGAAAAGGATCATTTGGGTTCTGGGTTTGGTTCTTCTAATGGGGGTTTTGATGCTCAGGGGAATGAGTCTGGATATGGTAGTGAGCCTGGTTATCGTGGTGATGCTGAATTTGGATATGGTGATGAGATTGATGAGGAGGATGAGGATGCCAGATTGCTTCTGTGGGGTGAGCGACTAGGAGATGCTAGAATGGAAATTGTAGGAGAGAACACATTTGCAGATCAGAAATCACACCATAGATGTCGTCGTAAGAAGCACGAATGTAGAATGGTTGATGCCCTGAGGTGA

Coding sequence (CDS)

ATGTCTCGCAGAGCCCTAGATTCCCGCCAATCCATTGACTCCTGTACTCTCAAGCTCCATGCTTGGAGCCCTTTCCACCTCCCCAAAACCCTAGATTCCGACACCCATTCCTCCGCTCCCACTAACCCTAAACCCTACTACTCTTCCACTCCTCTCCACACCAAGCGCCCTTGTCTCTCCGATCGAACTACCTCTTTCAATGTCGACGCCATTGACATGTCCGCCCTCAGTTTGATTGACGACGACAAACCTTCTATTGCCGCTGGCTGTTACACCCGTCGCAGCTTCCGATTGATTGCTAGGAAGCGCCGCCGGCGTGGATCTAGGTCTGTTTCTGGGCGGAGTAGTGATCGGAGTGGGACCAGACGGTGCTGCTCTGTTGGGGCTTCGGCGGCTCATGGGACTTGCTCGGATTTCCCTCTCGCGGTTGGGACTGATTCGAGTGGGGAGTTGTTTGTGAATGGAGATGCCAATTGGTCGTCGGATGTGAGTGAAGCGAAGAATTCGAGGAGGGAGAGAGAAGAAAAGGATCATTTGGGTTCTGGGTTTGGTTCTTCTAATGGGGGTTTTGATGCTCAGGGGAATGAGTCTGGATATGGTAGTGAGCCTGGTTATCGTGGTGATGCTGAATTTGGATATGGTGATGAGATTGATGAGGAGGATGAGGATGCCAGATTGCTTCTGTGGGGTGAGCGACTAGGAGATGCTAGAATGGAAATTGTAGGAGAGAACACATTTGCAGATCAGAAATCACACCATAGATGTCGTCGTAAGAAGCACGAATGTAGAATGGTTGATGCCCTGAGGTGA

Protein sequence

MSRRALDSRQSIDSCTLKLHAWSPFHLPKTLDSDTHSSAPTNPKPYYSSTPLHTKRPCLSDRTTSFNVDAIDMSALSLIDDDKPSIAAGCYTRRSFRLIARKRRRRGSRSVSGRSSDRSGTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHLGSGFGSSNGGFDAQGNESGYGSEPGYRGDAEFGYGDEIDEEDEDARLLLWGERLGDARMEIVGENTFADQKSHHRCRRKKHECRMVDALR
Homology
BLAST of CaUC10G188640.1 vs. NCBI nr
Match: XP_038906083.1 (uncharacterized protein LOC120091971 [Benincasa hispida])

HSP 1 Score: 520.0 bits (1338), Expect = 1.2e-143
Identity = 263/269 (97.77%), Postives = 265/269 (98.51%), Query Frame = 0

Query: 1   MSRRALDSRQSIDSCTLKLHAWSPFHLPKTLDSDTHSSAPTNPKPYYSSTPLHTKRPCLS 60
           MSRRALDSRQSIDSCTLKLH WSPFHLPKTLDSDTHSSAPTN KPYYSSTPLHTKRPCLS
Sbjct: 1   MSRRALDSRQSIDSCTLKLHGWSPFHLPKTLDSDTHSSAPTNSKPYYSSTPLHTKRPCLS 60

Query: 61  DRTTSFNVDAIDMSALSLIDDDKPSIAAGCYTRRSFRLIARKRRRRGSRSVSGRSSDRSG 120
           DRTTSFNVDAIDMSALSLIDDDKPSIAAGCYTRRS RLIARKRRRRGSRSVSGRSSDRSG
Sbjct: 61  DRTTSFNVDAIDMSALSLIDDDKPSIAAGCYTRRSLRLIARKRRRRGSRSVSGRSSDRSG 120

Query: 121 TRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHLG 180
           TRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHLG
Sbjct: 121 TRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHLG 180

Query: 181 SGFGSSNGGFDAQGNESGYGSEPGYRGDAEFGYGDEIDEEDEDARLLLWGERLGDARMEI 240
           SGFGSSNGGFDAQGNESGYGSEPGYRGD EFGYGDEIDEEDEDARLLLWGERLGD++MEI
Sbjct: 181 SGFGSSNGGFDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGDSKMEI 240

Query: 241 VGENTFADQKSHHRCRRKKHECRMVDALR 270
           VGENTFADQKSHHRCRRKKHECRMVDALR
Sbjct: 241 VGENTFADQKSHHRCRRKKHECRMVDALR 269

BLAST of CaUC10G188640.1 vs. NCBI nr
Match: XP_004152251.1 (uncharacterized protein LOC101206482 [Cucumis sativus] >KGN52810.1 hypothetical protein Csa_015327 [Cucumis sativus])

HSP 1 Score: 482.6 bits (1241), Expect = 2.1e-132
Identity = 250/270 (92.59%), Postives = 254/270 (94.07%), Query Frame = 0

Query: 1   MSRRALDSRQSIDSCTLKLHAWSPFHLPKTLDSDTH-SSAPTNPKPYYSSTPLHTKRPCL 60
           MSRR LDSR SIDSCTLK H W+PFHLPKTLDSD H +SAPTN KPYYSSTPLHTKRPCL
Sbjct: 1   MSRRPLDSRHSIDSCTLKFHGWTPFHLPKTLDSDPHNTSAPTNSKPYYSSTPLHTKRPCL 60

Query: 61  SDRTTSFNVDAIDMSALSLIDDDKPSIAAGCYTRRSFRLIARKRRRRGSRSVSGRSSDRS 120
           SDRTTSFNVDAIDMSALSLIDDDKPSI       RSFRLIARKRRRRGSRSVSGRSSDRS
Sbjct: 61  SDRTTSFNVDAIDMSALSLIDDDKPSIPPA----RSFRLIARKRRRRGSRSVSGRSSDRS 120

Query: 121 GTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHL 180
           GTRRCCSVGASAAHGTCSDFP+AVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHL
Sbjct: 121 GTRRCCSVGASAAHGTCSDFPIAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHL 180

Query: 181 GSGFGSSNGGFDAQGNESGYGSEPGYRGDAEFGYGDEIDEEDEDARLLLWGERLGDARME 240
           GSGF SSNGGFDAQGNESGYGSEPGYRGD EFGYGDEIDEEDEDARLLLWGERLGD+RME
Sbjct: 181 GSGFVSSNGGFDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGDSRME 240

Query: 241 IVGENTFADQKSHHRCRRKKHECRMVDALR 270
           IVGENTFADQKSHHRCRRKKHECRMVDALR
Sbjct: 241 IVGENTFADQKSHHRCRRKKHECRMVDALR 266

BLAST of CaUC10G188640.1 vs. NCBI nr
Match: XP_008454343.1 (PREDICTED: uncharacterized protein LOC103494772 [Cucumis melo])

HSP 1 Score: 482.6 bits (1241), Expect = 2.1e-132
Identity = 250/270 (92.59%), Postives = 254/270 (94.07%), Query Frame = 0

Query: 1   MSRRALDSRQSIDSCTLKLHAWSPFHLPKTLDSDTH-SSAPTNPKPYYSSTPLHTKRPCL 60
           MSRR LDSR SIDSCTLK H W+PFHLPKTLDSD H +SAPTN KPYYSSTP+HTKRPCL
Sbjct: 1   MSRRPLDSRHSIDSCTLKFHGWTPFHLPKTLDSDPHNTSAPTNSKPYYSSTPIHTKRPCL 60

Query: 61  SDRTTSFNVDAIDMSALSLIDDDKPSIAAGCYTRRSFRLIARKRRRRGSRSVSGRSSDRS 120
           SDRTTSFNVDAIDMSALSLIDDDKPSI       RSFRLIARKRRRRGSRSVSGRSSDRS
Sbjct: 61  SDRTTSFNVDAIDMSALSLIDDDKPSIPPA----RSFRLIARKRRRRGSRSVSGRSSDRS 120

Query: 121 GTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHL 180
           GTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHL
Sbjct: 121 GTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHL 180

Query: 181 GSGFGSSNGGFDAQGNESGYGSEPGYRGDAEFGYGDEIDEEDEDARLLLWGERLGDARME 240
           GSGF SSNGGFDAQGNESGYGSEPGYRGD EFGYGDEIDEEDEDARLLLWGERLGD+RME
Sbjct: 181 GSGFVSSNGGFDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGDSRME 240

Query: 241 IVGENTFADQKSHHRCRRKKHECRMVDALR 270
           IVGENTFADQKSHHRCRRKKHECRMVDALR
Sbjct: 241 IVGENTFADQKSHHRCRRKKHECRMVDALR 266

BLAST of CaUC10G188640.1 vs. NCBI nr
Match: XP_022949469.1 (uncharacterized protein LOC111452804 isoform X2 [Cucurbita moschata])

HSP 1 Score: 474.6 bits (1220), Expect = 5.8e-130
Identity = 249/274 (90.88%), Postives = 252/274 (91.97%), Query Frame = 0

Query: 1   MSRRALDSRQSIDSCTLKLHAWSPFH----LPKTLDSDTHSSAPTNPKPYYSSTPLHTKR 60
           MSRR LDSRQSIDSCTLKLH W PFH     PKTLDSDTH S PT  KPYYSST LHTKR
Sbjct: 1   MSRRPLDSRQSIDSCTLKLHTWRPFHHLHSAPKTLDSDTHISPPTTSKPYYSSTALHTKR 60

Query: 61  PCLSDRTTSFNVDAIDMSALSLIDDDKPSIAAGCYTRRSFRLIARKRRRRGSRSVSGRSS 120
           PCLSDRTTSFNVDAIDMS LSLIDDDKPSIAAG YTRRSF LIARKRRRRGSRSVSGRSS
Sbjct: 61  PCLSDRTTSFNVDAIDMSRLSLIDDDKPSIAAGRYTRRSFGLIARKRRRRGSRSVSGRSS 120

Query: 121 DRSGTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEK 180
           DRSGTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNSRRER+EK
Sbjct: 121 DRSGTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNSRRERDEK 180

Query: 181 D-HLGSGFGSSNGGFDAQGNESGYGSEPGYRGDAEFGYGDEIDEEDEDARLLLWGERLGD 240
           D HLG GFG SNGG DAQGNESGYGSEPGYRGD EFGYGDEIDEEDEDARLLLWGERLGD
Sbjct: 181 DHHLGGGFG-SNGGLDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGD 240

Query: 241 ARMEIVGENTFADQKSHHRCRRKKHECRMVDALR 270
           +RMEIVGENTF+DQKSHHRCRRKKHECRMVD LR
Sbjct: 241 SRMEIVGENTFSDQKSHHRCRRKKHECRMVDTLR 273

BLAST of CaUC10G188640.1 vs. NCBI nr
Match: XP_022155253.1 (uncharacterized protein LOC111022393 [Momordica charantia])

HSP 1 Score: 474.6 bits (1220), Expect = 5.8e-130
Identity = 246/272 (90.44%), Postives = 253/272 (93.01%), Query Frame = 0

Query: 1   MSRRALDSRQSIDSCTLKLHAWSPFHL---PKTLDSDTHSSAPTNPKPYYSSTPLHTKRP 60
           MSRRALDSRQSI+SCTLKLH+W PF L   PKTLDSD H+SAPTN KPYYSST LHTKRP
Sbjct: 1   MSRRALDSRQSIESCTLKLHSWRPFQLHAAPKTLDSDVHNSAPTNSKPYYSSTGLHTKRP 60

Query: 61  CLSDRTTSFNVDAIDMSALSLIDDDKPSIAAGCYTRRSFRLIARKRRRRGSRSVSGRSSD 120
           CLSDR TSF+VDAIDMS LSLIDDDKPSIAAGCYTRRSFRL+A KRRRRGSRSVSGRSSD
Sbjct: 61  CLSDRATSFSVDAIDMSRLSLIDDDKPSIAAGCYTRRSFRLMAGKRRRRGSRSVSGRSSD 120

Query: 121 RSGTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKD 180
           RSGTRRCCSVGASAAHGTCSDFP+AVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKD
Sbjct: 121 RSGTRRCCSVGASAAHGTCSDFPVAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKD 180

Query: 181 HLGSGFGSSNGGFDAQGNESGYGSEPGYRGDAEFGYGDEIDEEDEDARLLLWGERLGDAR 240
             G     SNGGFDAQGNESGYGSEPGYRGD EFGYGDEIDEEDEDARLLLWGERLGD+R
Sbjct: 181 SFG-----SNGGFDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGDSR 240

Query: 241 MEIVGENTFADQKSHHRCRRKKHECRMVDALR 270
           MEIVGENTFADQKSHHRCRRKKHECRMVDALR
Sbjct: 241 MEIVGENTFADQKSHHRCRRKKHECRMVDALR 267

BLAST of CaUC10G188640.1 vs. ExPASy TrEMBL
Match: A0A0A0KT54 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G001770 PE=4 SV=1)

HSP 1 Score: 482.6 bits (1241), Expect = 1.0e-132
Identity = 250/270 (92.59%), Postives = 254/270 (94.07%), Query Frame = 0

Query: 1   MSRRALDSRQSIDSCTLKLHAWSPFHLPKTLDSDTH-SSAPTNPKPYYSSTPLHTKRPCL 60
           MSRR LDSR SIDSCTLK H W+PFHLPKTLDSD H +SAPTN KPYYSSTPLHTKRPCL
Sbjct: 1   MSRRPLDSRHSIDSCTLKFHGWTPFHLPKTLDSDPHNTSAPTNSKPYYSSTPLHTKRPCL 60

Query: 61  SDRTTSFNVDAIDMSALSLIDDDKPSIAAGCYTRRSFRLIARKRRRRGSRSVSGRSSDRS 120
           SDRTTSFNVDAIDMSALSLIDDDKPSI       RSFRLIARKRRRRGSRSVSGRSSDRS
Sbjct: 61  SDRTTSFNVDAIDMSALSLIDDDKPSIPPA----RSFRLIARKRRRRGSRSVSGRSSDRS 120

Query: 121 GTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHL 180
           GTRRCCSVGASAAHGTCSDFP+AVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHL
Sbjct: 121 GTRRCCSVGASAAHGTCSDFPIAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHL 180

Query: 181 GSGFGSSNGGFDAQGNESGYGSEPGYRGDAEFGYGDEIDEEDEDARLLLWGERLGDARME 240
           GSGF SSNGGFDAQGNESGYGSEPGYRGD EFGYGDEIDEEDEDARLLLWGERLGD+RME
Sbjct: 181 GSGFVSSNGGFDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGDSRME 240

Query: 241 IVGENTFADQKSHHRCRRKKHECRMVDALR 270
           IVGENTFADQKSHHRCRRKKHECRMVDALR
Sbjct: 241 IVGENTFADQKSHHRCRRKKHECRMVDALR 266

BLAST of CaUC10G188640.1 vs. ExPASy TrEMBL
Match: A0A1S3BYD4 (uncharacterized protein LOC103494772 OS=Cucumis melo OX=3656 GN=LOC103494772 PE=4 SV=1)

HSP 1 Score: 482.6 bits (1241), Expect = 1.0e-132
Identity = 250/270 (92.59%), Postives = 254/270 (94.07%), Query Frame = 0

Query: 1   MSRRALDSRQSIDSCTLKLHAWSPFHLPKTLDSDTH-SSAPTNPKPYYSSTPLHTKRPCL 60
           MSRR LDSR SIDSCTLK H W+PFHLPKTLDSD H +SAPTN KPYYSSTP+HTKRPCL
Sbjct: 1   MSRRPLDSRHSIDSCTLKFHGWTPFHLPKTLDSDPHNTSAPTNSKPYYSSTPIHTKRPCL 60

Query: 61  SDRTTSFNVDAIDMSALSLIDDDKPSIAAGCYTRRSFRLIARKRRRRGSRSVSGRSSDRS 120
           SDRTTSFNVDAIDMSALSLIDDDKPSI       RSFRLIARKRRRRGSRSVSGRSSDRS
Sbjct: 61  SDRTTSFNVDAIDMSALSLIDDDKPSIPPA----RSFRLIARKRRRRGSRSVSGRSSDRS 120

Query: 121 GTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHL 180
           GTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHL
Sbjct: 121 GTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKDHL 180

Query: 181 GSGFGSSNGGFDAQGNESGYGSEPGYRGDAEFGYGDEIDEEDEDARLLLWGERLGDARME 240
           GSGF SSNGGFDAQGNESGYGSEPGYRGD EFGYGDEIDEEDEDARLLLWGERLGD+RME
Sbjct: 181 GSGFVSSNGGFDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGDSRME 240

Query: 241 IVGENTFADQKSHHRCRRKKHECRMVDALR 270
           IVGENTFADQKSHHRCRRKKHECRMVDALR
Sbjct: 241 IVGENTFADQKSHHRCRRKKHECRMVDALR 266

BLAST of CaUC10G188640.1 vs. ExPASy TrEMBL
Match: A0A6J1DMG8 (uncharacterized protein LOC111022393 OS=Momordica charantia OX=3673 GN=LOC111022393 PE=4 SV=1)

HSP 1 Score: 474.6 bits (1220), Expect = 2.8e-130
Identity = 246/272 (90.44%), Postives = 253/272 (93.01%), Query Frame = 0

Query: 1   MSRRALDSRQSIDSCTLKLHAWSPFHL---PKTLDSDTHSSAPTNPKPYYSSTPLHTKRP 60
           MSRRALDSRQSI+SCTLKLH+W PF L   PKTLDSD H+SAPTN KPYYSST LHTKRP
Sbjct: 1   MSRRALDSRQSIESCTLKLHSWRPFQLHAAPKTLDSDVHNSAPTNSKPYYSSTGLHTKRP 60

Query: 61  CLSDRTTSFNVDAIDMSALSLIDDDKPSIAAGCYTRRSFRLIARKRRRRGSRSVSGRSSD 120
           CLSDR TSF+VDAIDMS LSLIDDDKPSIAAGCYTRRSFRL+A KRRRRGSRSVSGRSSD
Sbjct: 61  CLSDRATSFSVDAIDMSRLSLIDDDKPSIAAGCYTRRSFRLMAGKRRRRGSRSVSGRSSD 120

Query: 121 RSGTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKD 180
           RSGTRRCCSVGASAAHGTCSDFP+AVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKD
Sbjct: 121 RSGTRRCCSVGASAAHGTCSDFPVAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEKD 180

Query: 181 HLGSGFGSSNGGFDAQGNESGYGSEPGYRGDAEFGYGDEIDEEDEDARLLLWGERLGDAR 240
             G     SNGGFDAQGNESGYGSEPGYRGD EFGYGDEIDEEDEDARLLLWGERLGD+R
Sbjct: 181 SFG-----SNGGFDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGDSR 240

Query: 241 MEIVGENTFADQKSHHRCRRKKHECRMVDALR 270
           MEIVGENTFADQKSHHRCRRKKHECRMVDALR
Sbjct: 241 MEIVGENTFADQKSHHRCRRKKHECRMVDALR 267

BLAST of CaUC10G188640.1 vs. ExPASy TrEMBL
Match: A0A6J1GCW8 (uncharacterized protein LOC111452804 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111452804 PE=4 SV=1)

HSP 1 Score: 474.6 bits (1220), Expect = 2.8e-130
Identity = 249/274 (90.88%), Postives = 252/274 (91.97%), Query Frame = 0

Query: 1   MSRRALDSRQSIDSCTLKLHAWSPFH----LPKTLDSDTHSSAPTNPKPYYSSTPLHTKR 60
           MSRR LDSRQSIDSCTLKLH W PFH     PKTLDSDTH S PT  KPYYSST LHTKR
Sbjct: 1   MSRRPLDSRQSIDSCTLKLHTWRPFHHLHSAPKTLDSDTHISPPTTSKPYYSSTALHTKR 60

Query: 61  PCLSDRTTSFNVDAIDMSALSLIDDDKPSIAAGCYTRRSFRLIARKRRRRGSRSVSGRSS 120
           PCLSDRTTSFNVDAIDMS LSLIDDDKPSIAAG YTRRSF LIARKRRRRGSRSVSGRSS
Sbjct: 61  PCLSDRTTSFNVDAIDMSRLSLIDDDKPSIAAGRYTRRSFGLIARKRRRRGSRSVSGRSS 120

Query: 121 DRSGTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNSRREREEK 180
           DRSGTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNSRRER+EK
Sbjct: 121 DRSGTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNSRRERDEK 180

Query: 181 D-HLGSGFGSSNGGFDAQGNESGYGSEPGYRGDAEFGYGDEIDEEDEDARLLLWGERLGD 240
           D HLG GFG SNGG DAQGNESGYGSEPGYRGD EFGYGDEIDEEDEDARLLLWGERLGD
Sbjct: 181 DHHLGGGFG-SNGGLDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGD 240

Query: 241 ARMEIVGENTFADQKSHHRCRRKKHECRMVDALR 270
           +RMEIVGENTF+DQKSHHRCRRKKHECRMVD LR
Sbjct: 241 SRMEIVGENTFSDQKSHHRCRRKKHECRMVDTLR 273

BLAST of CaUC10G188640.1 vs. ExPASy TrEMBL
Match: A0A6J1J7N4 (uncharacterized protein LOC111482487 OS=Cucurbita maxima OX=3661 GN=LOC111482487 PE=4 SV=1)

HSP 1 Score: 465.7 bits (1197), Expect = 1.3e-127
Identity = 243/272 (89.34%), Postives = 254/272 (93.38%), Query Frame = 0

Query: 1   MSRRALDSRQSIDSCTLKLHAWSPFHLPKTLDSDTHSSAPTNPKPYYSSTPLHTKRPCLS 60
           MSRRALDSR+SI SCTLKLH W PF LPK LDSD H+SAPT+ KPYYSS+ LHTKRPCLS
Sbjct: 1   MSRRALDSRESIHSCTLKLHGWRPFQLPKALDSDAHTSAPTSAKPYYSSSGLHTKRPCLS 60

Query: 61  DRTTSFNVDAIDMSALSLIDDDKPSI-AAGCYTRRSFRLIARK-RRRRGSRSVSGRSSDR 120
           DRTTSFNVDAIDMS LSLIDDDKPSI A G Y+R SF+LIARK RRRRGSRSVSGRS+DR
Sbjct: 61  DRTTSFNVDAIDMSGLSLIDDDKPSITAGGSYSRPSFQLIARKRRRRRGSRSVSGRSTDR 120

Query: 121 SGTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNS-RREREEKD 180
           SGTRRCCSVGASAAHGTCSDFP+AVGTDSSGELFVNGDANWSSDVSEAKNS RREREEKD
Sbjct: 121 SGTRRCCSVGASAAHGTCSDFPMAVGTDSSGELFVNGDANWSSDVSEAKNSRRREREEKD 180

Query: 181 HLGSGFGSSNGGFDAQGNESGYGSEPGYRGDAEFGYGDEIDEEDEDARLLLWGERLGDAR 240
            LGSGFGSSNGGFDAQGNESGYGSEPGYRGD EFGYGDEIDEEDEDARLLLWGERLGD+R
Sbjct: 181 QLGSGFGSSNGGFDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGDSR 240

Query: 241 MEIVGENTFADQKSHHRCRRKKHECRMVDALR 270
           +EIVGENTFADQKSHHRCRRKKHEC MVD+LR
Sbjct: 241 VEIVGENTFADQKSHHRCRRKKHECGMVDSLR 272

BLAST of CaUC10G188640.1 vs. TAIR 10
Match: AT4G02425.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 29 Blast hits to 28 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 264.6 bits (675), Expect = 8.6e-71
Identity = 164/278 (58.99%), Postives = 199/278 (71.58%), Query Frame = 0

Query: 1   MSRRALD-SRQSIDSCTLKLHAWSPFHLPKTLDSDTHSSAPTNPKPYYSSTPLHTKRPCL 60
           MS + L+ SR SI+SCT +L +W PFH  KTLDS   S  P     ++S TP   KRPC 
Sbjct: 1   MSPKHLESSRSSIESCTSQLLSWRPFHRSKTLDS---SDQPPQTNGFHSFTP---KRPCF 60

Query: 61  SDRTTSFNVDAIDMSALSLIDDDK--PSIAAGCYTRR-SFRLIARKRRRRGSRSVSGRSS 120
           SDR+TSF ++A  MS LSL DDD    +++A  Y+ R SFRL+ARKRRRR SRSVSGRSS
Sbjct: 61  SDRSTSFTIEA--MSRLSLADDDNGGKTLSASNYSNRGSFRLVARKRRRRNSRSVSGRSS 120

Query: 121 DRSGTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSE-AKNSRREREE 180
           DRSGTRRCCS+G   AHGTCSD P AVGTDSSGELF  G+ANW+SDVSE A+NSRRER +
Sbjct: 121 DRSGTRRCCSIG---AHGTCSDLPFAVGTDSSGELF--GEANWASDVSEAARNSRRERRD 180

Query: 181 ---KDHLGSGFGSSNGGFDAQGNESGYGSEPGYRGDAEFGYGDEIDEEDEDARLLLWGER 240
              +     GFG +N G D  GNESGYGSEPGYRGDAEFGYGDE D+E+ED + L WG+ 
Sbjct: 181 SGGEKEASGGFGFAN-GVDPMGNESGYGSEPGYRGDAEFGYGDEFDDEEEDVKPLFWGDT 240

Query: 241 LGDARMEIVGENTFADQKSHHRCRRKK-HECRMVDALR 270
             D+ M + GE  F+D K   RCRR++ H+ + VD++R
Sbjct: 241 --DSTMGMSGETKFSDSKPQFRCRRRRQHDYKTVDSMR 262

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038906083.11.2e-14397.77uncharacterized protein LOC120091971 [Benincasa hispida][more]
XP_004152251.12.1e-13292.59uncharacterized protein LOC101206482 [Cucumis sativus] >KGN52810.1 hypothetical ... [more]
XP_008454343.12.1e-13292.59PREDICTED: uncharacterized protein LOC103494772 [Cucumis melo][more]
XP_022949469.15.8e-13090.88uncharacterized protein LOC111452804 isoform X2 [Cucurbita moschata][more]
XP_022155253.15.8e-13090.44uncharacterized protein LOC111022393 [Momordica charantia][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KT541.0e-13292.59Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G001770 PE=4 SV=1[more]
A0A1S3BYD41.0e-13292.59uncharacterized protein LOC103494772 OS=Cucumis melo OX=3656 GN=LOC103494772 PE=... [more]
A0A6J1DMG82.8e-13090.44uncharacterized protein LOC111022393 OS=Momordica charantia OX=3673 GN=LOC111022... [more]
A0A6J1GCW82.8e-13090.88uncharacterized protein LOC111452804 isoform X2 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1J7N41.3e-12789.34uncharacterized protein LOC111482487 OS=Cucurbita maxima OX=3661 GN=LOC111482487... [more]
Match NameE-valueIdentityDescription
AT4G02425.18.6e-7158.99unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 165..180
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 33..54
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 102..124
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 160..213
NoneNo IPR availablePANTHERPTHR36775LYR MOTIF PROTEINcoord: 1..268

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CaUC10G188640CaUC10G188640gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CaUC10G188640.1-exonCaUC10G188640.1-exon-Ciama_Chr10:21407015..21407717exon
CaUC10G188640.1-exonCaUC10G188640.1-exon-Ciama_Chr10:21409618..21409724exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CaUC10G188640.1-cdsCaUC10G188640.1-cds-Ciama_Chr10:21407015..21407717CDS
CaUC10G188640.1-cdsCaUC10G188640.1-cds-Ciama_Chr10:21409618..21409724CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CaUC10G188640.1CaUC10G188640.1-proteinpolypeptide