Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGTCCTCAGCATTACTAGGAATCATGGAAGTGTTGGAATGCATGAGGCATCAAGAGCAAAATGGAAATGGGATCGTGAAGCATGAAAACGATGGAAAAAAGAGTTGACTTGAAAACGGTGGGAAAAAAATGAATTTGATATTACAAATTGGGCTCAAAATGCTCAATCGAGACATGGGTTCTAAATTACACTACACCCAATCTCATTCCAAACTTGACCCCAAACAGCCTCGATATGTTTTTTAAATCTACATTTAACAGTTATTACGAGACATTAATGTGTTGAATGGTTCCTAGTTAGTGGAACAAGAAAGATATGCATCAATATTAGATACACAATCAAAGAATTTCCCTCAAGGAAGAATAAATTTGTCCCCACATGGGCGTTGAAGTTGGATACTTGAGAAAGAAGCAAATTGAGACAGGTCGTCATCACAAGCAATCAAATTCTTCAAATGCCACCAACTTGGGTACCACGGAAGGCCACTTGTATAAGAAGGCACATAAACAGAGTAATGAGTGCATCAAAATGAACTCAGTGATGAACATAAGGCCAGTAGTTATATTTGTAGCAGGAGCCATGTTCGGTTCGCTGCTGACTCGATCCTTTCCGCGCTGCCACCACCACCTCCACCAACTCCGCCGATGCTACAGCCGTGGTGCTGAAACCAGCTTCACCAAGCAACCAAGTATGGAGTCTAGTGGAGGAGAAATTAGGAATGTTGATTAA mRNA sequence ATGTCCTCAGCATTACTAGGAATCATGGAAGTGTTGGAATGCATGAGGCATCAAGAGCAAAATGGAAATGGGATCGTGAAGCATGAAAACGATGGAAAAAAGAGTCGTCATCACAAGCAATCAAATTCTTCAAATGCCACCAACTTGGGTACCACGGAAGGCCACTTGTATAAGAAGGCACATAAACAGAGTAATGAGTGCATCAAAATGAACTCAGTGATGAACATAAGGCCAGTAGTTATATTTGTAGCAGGAGCCATGTTCGGTTCGCTGCTGACTCGATCCTTTCCGCGCTGCCACCACCACCTCCACCAACTCCGCCGATGCTACAGCCGTGGTGCTGAAACCAGCTTCACCAAGCAACCAAGTATGGAGTCTAGTGGAGGAGAAATTAGGAATGTTGATTAA Coding sequence (CDS) ATGTCCTCAGCATTACTAGGAATCATGGAAGTGTTGGAATGCATGAGGCATCAAGAGCAAAATGGAAATGGGATCGTGAAGCATGAAAACGATGGAAAAAAGAGTCGTCATCACAAGCAATCAAATTCTTCAAATGCCACCAACTTGGGTACCACGGAAGGCCACTTGTATAAGAAGGCACATAAACAGAGTAATGAGTGCATCAAAATGAACTCAGTGATGAACATAAGGCCAGTAGTTATATTTGTAGCAGGAGCCATGTTCGGTTCGCTGCTGACTCGATCCTTTCCGCGCTGCCACCACCACCTCCACCAACTCCGCCGATGCTACAGCCGTGGTGCTGAAACCAGCTTCACCAAGCAACCAAGTATGGAGTCTAGTGGAGGAGAAATTAGGAATGTTGATTAA Protein sequence MSSALLGIMEVLECMRHQEQNGNGIVKHENDGKKSRHHKQSNSSNATNLGTTEGHLYKKAHKQSNECIKMNSVMNIRPVVIFVAGAMFGSLLTRSFPRCHHHLHQLRRCYSRGAETSFTKQPSMESSGGEIRNVD
Homology
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 20..54 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 115..135 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 22..38 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| CaUC06G109670.1-exon | CaUC06G109670.1-exon-Ciama_Chr06:3911415..3911517 | exon |
| CaUC06G109670.1-exon | CaUC06G109670.1-exon-Ciama_Chr06:3911840..3912144 | exon |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| CaUC06G109670.1-cds | CaUC06G109670.1-cds-Ciama_Chr06:3911415..3911517 | CDS |
| CaUC06G109670.1-cds | CaUC06G109670.1-cds-Ciama_Chr06:3911840..3912144 | CDS |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
|---|
| CaUC06G109670.1 | CaUC06G109670.1-protein | polypeptide |
|
